Rmu_sc0003337.1_g000001

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003337.1
OG0000063
Physical Location & Seq
Reverse (-)
1 .. 2062
2062 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003337.1_g000001.1.cds

Sequence Viewer

Length: 1629 bp
atggccgatgatagctcagaaaccgaaatggggctagaggataacgaagcaacaaaagcacaattggctataatgaaagcacaactggcagaattctcaaccaaatttgaagctgcttttagagcttctatggacaaactccaaagctctgtgatatgtcggttggcaaagaacaaggaaccgcgaagagagtgtgtattaggaccccattacagcttgggtatgccgccggccatcaacgagccaggtagttggccgaaatcgacacccgagtggaagagcgaacatgcaattgccgaggatgtgtccacggttgagaggcacgaaccaacgcaacatgagcacgccgctttcctcctttattggttatgcaaatatgtgttttgcacgaagtcgaacaagtgcttgttcgagtttgctggtattgcggaggcccttagcttgggtaaacctttagcccttggtccgtttgtccttgcctatctttaccgtactttgcgtaatgtagtgaccaacaatatgacactggatgttggagggccattatggatgttccaggtatgggtgcaaacttactttcgtcagcttcgaccaagtcatctttttgattccactgtgattctcggccgccagatcatctctcttggtcctcatgcacattcggtagcagaatgctttgctttcttcctttcgaaaaagagcatgaccaaggaagagtttgccatatgttatagccgagattatccttcttgtcttgcattaaacataacgaaaccatgggagaggtctttggacttgtcagtacttctaccttgggggagcattctcatttctcgagacataaactatggtctcaagggtacactgggtcggccaggggttgaggtttaccttccaaactttgttgcgcgtcagtttggcttcatacaaagttgtccagccttctttctaatgtcccggaatcatttttcttcatggagagatgggtttacagacaccgcgcattgttcggccgtcactctttattatcagactcagtttggcaactttgagagatccagcctgagcgcccgcgaacctgatcatagagcaactccgactttccaaacttggtggtcaacacttatcaagaagaaacttggagaggacctgcggacaaccgagcgtattgccttgtacggattcccgggcttgtccaccaacaaaggtaatggcaagaagaaggcaccggttgccaaatcgaaatccaaagaaaagtctaaggaagagcaaacctcaaagaaacgagaatcaaagtcgggaagagctctgcctaccaagaaggtaaagaagtcacctggcgcggtggagagttcggtcacgaatccggctgacattatggttagtaaagacataattttcgagggggatatggataatagccaaaatgttctagctgaaaatcgcatcatgtctggagctgaggatgtggccgaatctagtaatgcctcaaacaatagcacgggctcggccgacagtagaggttcgcctgatgaagcacagtcagaaaactttgagcacgagagagatgaccgcattgatcactcttcgtatcctcctgaaagcaacatggttgaaattgacatggat
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

543

Amino Acids

60.84

Weight (kDa)

6.69

Isoelectric Point (pI)

42.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000063)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21382 FvH4_1g29794 FvH4_1g29795 FvH4_2g35573 FvH4_2g35574 FvH4_4g18552 FvH4_5g16044
malus_domestica MD05G1017000.v1.1
prunus_persica Prupe.3G140800_v2.0.a1 Prupe.6G164100_v2.0.a1
pyrus_communis pycom01g04330 pycom03g19820 pycom04g06720 pycom06g11360 pycom06g19000 pycom10g08100 pycom13g16660 pycom13g27590 pycom13g27640 pycom13g27890 pycom16g11770 pycom16g19530
rosa_chinensis RchiOBHm_Chr1g0317341 RchiOBHm_Chr1g0317351 RchiOBHm_Chr1g0320431 RchiOBHm_Chr1g0320711 RchiOBHm_Chr1g0320721 RchiOBHm_Chr1g0321611 RchiOBHm_Chr1g0321621 RchiOBHm_Chr1g0321631 RchiOBHm_Chr1g0323651 RchiOBHm_Chr1g0332991 RchiOBHm_Chr1g0333001 RchiOBHm_Chr1g0335981 RchiOBHm_Chr1g0335991 RchiOBHm_Chr1g0336001 RchiOBHm_Chr1g0350201 RchiOBHm_Chr1g0368201 RchiOBHm_Chr2g0105531 RchiOBHm_Chr2g0105541 RchiOBHm_Chr2g0116571 RchiOBHm_Chr2g0116581 RchiOBHm_Chr2g0121071 RchiOBHm_Chr2g0131351 RchiOBHm_Chr2g0131661 RchiOBHm_Chr2g0133021 RchiOBHm_Chr2g0138181 RchiOBHm_Chr2g0138191 RchiOBHm_Chr2g0142701 RchiOBHm_Chr2g0142711 RchiOBHm_Chr2g0152981 RchiOBHm_Chr3g0456181 RchiOBHm_Chr3g0456191 RchiOBHm_Chr3g0493631 RchiOBHm_Chr3g0496201 RchiOBHm_Chr4g0401541 RchiOBHm_Chr4g0410311 RchiOBHm_Chr4g0410321 RchiOBHm_Chr4g0419231 RchiOBHm_Chr4g0419511 RchiOBHm_Chr4g0419521 RchiOBHm_Chr5g0004311 RchiOBHm_Chr5g0004321 RchiOBHm_Chr5g0038131 RchiOBHm_Chr5g0038251 RchiOBHm_Chr5g0038261 RchiOBHm_Chr5g0038271 RchiOBHm_Chr5g0052241 RchiOBHm_Chr5g0053911 RchiOBHm_Chr5g0074641 RchiOBHm_Chr5g0076651 RchiOBHm_Chr5g0076661 RchiOBHm_Chr6g0249161 RchiOBHm_Chr6g0249171 RchiOBHm_Chr6g0250961 RchiOBHm_Chr6g0253701 RchiOBHm_Chr6g0262131 RchiOBHm_Chr6g0263181 RchiOBHm_Chr6g0263231 RchiOBHm_Chr6g0263241 RchiOBHm_Chr6g0263251 RchiOBHm_Chr6g0291271 RchiOBHm_Chr7g0194611 RchiOBHm_Chr7g0219691 RchiOBHm_Chr7g0219701 RchiOBHm_Chr7g0225431 RchiOBHm_Chr7g0234221 RchiOBHm_Chr7g0238711 RchiOBHm_Chr7g0238721 RchiOBHm_Chr7g0238731 RchiOBHm_Chr7g0239611 RchiOBHm_Chr7g0239621
rosa_laevigata RLG00000001361 RLG00000001376 RLG00000001860 RLG00000002051 RLG00000002362 RLG00000008940 RLG00000012764 RLG00000018782 RLG00000029639 RLG00000030151
rosa_multiflora Rmu_co8090794.1_g000001 Rmu_co8135356.1_g000001 Rmu_co8224968.1_g000001 Rmu_sc0000016.1_g000020 Rmu_sc0000029.1_g000061 Rmu_sc0000035.1_g000032 Rmu_sc0000060.1_g000041 Rmu_sc0000148.1_g000041 Rmu_sc0000315.1_g000084 Rmu_sc0000527.1_g000005 Rmu_sc0000527.1_g000007 Rmu_sc0000527.1_g000008 Rmu_sc0000648.1_g000002 Rmu_sc0000762.1_g000076 Rmu_sc0000870.1_g000003 Rmu_sc0000870.1_g000004 Rmu_sc0000948.1_g000037 Rmu_sc0000997.1_g000003 Rmu_sc0001047.1_g000041 Rmu_sc0001047.1_g000042 Rmu_sc0001075.1_g000044 Rmu_sc0001174.1_g000006 Rmu_sc0001235.1_g000025 Rmu_sc0001292.1_g000008 Rmu_sc0001301.1_g000038 Rmu_sc0001461.1_g000069 Rmu_sc0001461.1_g000070 Rmu_sc0001669.1_g000041 Rmu_sc0001689.1_g000027 Rmu_sc0001896.1_g000008 Rmu_sc0001909.1_g000013 Rmu_sc0002170.1_g000038 Rmu_sc0002200.1_g000014 Rmu_sc0002283.1_g000027 Rmu_sc0002284.1_g000014 Rmu_sc0002294.1_g000017 Rmu_sc0002294.1_g000018 Rmu_sc0002307.1_g000020 Rmu_sc0002307.1_g000021 Rmu_sc0002307.1_g000023 Rmu_sc0002357.1_g000054 Rmu_sc0002409.1_g000005 Rmu_sc0002535.1_g000002 Rmu_sc0002589.1_g000014 Rmu_sc0002759.1_g000016 Rmu_sc0002759.1_g000017 Rmu_sc0002777.1_g000015 Rmu_sc0002824.1_g000016 Rmu_sc0002872.1_g000005 Rmu_sc0002872.1_g000012 Rmu_sc0002872.1_g000013 Rmu_sc0002942.1_g000019 Rmu_sc0003337.1_g000001 Rmu_sc0003410.1_g000052 Rmu_sc0003445.1_g000010 Rmu_sc0003773.1_g000007 Rmu_sc0003773.1_g000008 Rmu_sc0003895.1_g000002 Rmu_sc0004063.1_g000006 Rmu_sc0004088.1_g000009 Rmu_sc0004088.1_g000010 Rmu_sc0004174.1_g000027 Rmu_sc0004196.1_g000010 Rmu_sc0004515.1_g000006 Rmu_sc0004727.1_g000010 Rmu_sc0004755.1_g000018 Rmu_sc0005016.1_g000030 Rmu_sc0005026.1_g000001 Rmu_sc0005044.1_g000007 Rmu_sc0005284.1_g000001 Rmu_sc0005431.1_g000030 Rmu_sc0005802.1_g000014 Rmu_sc0005802.1_g000015 Rmu_sc0005994.1_g000004 Rmu_sc0005994.1_g000005 Rmu_sc0006059.1_g000048 Rmu_sc0006583.1_g000013 Rmu_sc0006824.1_g000009 Rmu_sc0007458.1_g000005 Rmu_sc0007707.1_g000002 Rmu_sc0008242.1_g000012 Rmu_sc0008713.1_g000006 Rmu_sc0008770.1_g000008 Rmu_sc0009785.1_g000004 Rmu_sc0009785.1_g000005 Rmu_sc0010125.1_g000001 Rmu_sc0010211.1_g000004 Rmu_sc0011034.1_g000001 Rmu_sc0011833.1_g000006 Rmu_sc0014851.1_g000001 Rmu_sc0014899.1_g000001 Rmu_sc0015060.1_g000003 Rmu_sc0015186.1_g000001 Rmu_sc0015248.1_g000003 Rmu_sc0015248.1_g000004 Rmu_sc0015314.1_g000001 Rmu_sc0018098.1_g000002 Rmu_sc0022706.1_g000004 Rmu_sc0023350.1_g000002 Rmu_sc0027636.1_g000001 Rmu_sc0027672.1_g000003 Rmu_sc0030879.1_g000001 Rmu_ssc0000008.1_g000029 Rmu_ssc0000019.1_g000014 Rmu_ssc0000050.1_g000082 Rmu_ssc0000282.1_g000004 Rmu_ssc0000311.1_g000010
rosa_roxburghii Rroxscaffold_1G00015190 Rroxscaffold_1G00031880 Rroxscaffold_1G00031890 Rroxscaffold_1G00059310 Rroxscaffold_1G00060420 Rroxscaffold_1G00067930 Rroxscaffold_1G00075030 Rroxscaffold_2G00082210 Rroxscaffold_2G00122970 Rroxscaffold_3G00218230 Rroxscaffold_3G00219020 Rroxscaffold_3G00219030 Rroxscaffold_3G00223680 Rroxscaffold_3G00223690 Rroxscaffold_3G00223700 Rroxscaffold_3G00226870 Rroxscaffold_3G00226880 Rroxscaffold_3G00232990 Rroxscaffold_3G00265610 Rroxscaffold_3G00265620 Rroxscaffold_3G00265630 Rroxscaffold_4G00318660 Rroxscaffold_4G00319060 Rroxscaffold_4G00323500 Rroxscaffold_5G00357520 Rroxscaffold_5G00366150 Rroxscaffold_5G00377470 Rroxscaffold_6G00395700 Rroxscaffold_6G00413950 Rroxscaffold_7G00187650 Rroxscaffold_7G00198290 Rroxscaffold_7G00198300 Rroxscaffold_7G00208060
rosa_rugosa Rorug01G0173900 Rorug01G0174000 Rorug01G0174100 Rorug01G0174100 Rorug02G0341200 Rorug04G0135700 Rorug04G0135800 Rorug05G0032500 Rorug06G0021800
rosa_samantha Rh1AG036600 Rh1AG245800 Rh1CG021700 Rh1CG021800 Rh1CG085800 Rh1CG085900 Rh1CG187900 Rh1CG229600 Rh1CG239600 Rh1CG246500 Rh1CG246600 Rh2BG478100 Rh2DG341300 Rh2DG366600 Rh2DG375700 Rh2DG384300 Rh2DG487000 Rh2DG504000 Rh2DG504100 Rh3AG311800 Rh3AG327500 Rh3AG328300 Rh3BG345100 Rh3CG320100 Rh4AG005700 Rh4AG067900 Rh4AG068000 Rh4AG084400 Rh4AG106700 Rh4AG160000 Rh4AG173900 Rh4AG174000 Rh4CG125300 Rh4CG125500 Rh4CG264500 Rh4DG110800 Rh5AG047300 Rh5AG085200 Rh5AG126300 Rh5AG127300 Rh5AG203000 Rh5AG332400 Rh5AG332500 Rh5AG342400 Rh5AG344100 Rh5AG375600 Rh5AG378300 Rh5AG386000 Rh5AG529600 Rh5BG125200 Rh5CG137600 Rh5CG137700 Rh5DG125200 Rh6BG134100 Rh6BG175400 Rh6BG179500 Rh6BG179600 Rh6BG181600 Rh6BG181700 Rh6BG191100 Rh6BG232900 Rh6BG259700 Rh6BG259800 Rh7AG028000 Rh7AG319400 Rh7AG352700 Rh7AG352800 Rh7AG352900 Rh7AG482500 Rh7AG482600 Rh7AG503800 Rh7BG334700 Rh7CG200100 Rh7CG336200 Rh7CG370200 Rh7CG370400 Rh7CG370500
rosa_wichuraiana Rw1G001580 Rw1G003570 Rw1G004260 Rw1G004270 Rw1G021170 Rw2G019390 Rw2G040280 Rw2G044050 Rw4G004430 Rw5G010950 Rw5G018350 Rw5G032890 Rw6G002840 Rw6G006510 Rw6G007780 Rw6G033790 Rw7G036320 Rw7G040550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1158
AccB1I GGYRCC 1 cut(s) 1225
AccII CGCG 5 cut(s) 184, 910, 1001, 1074, 1343
AclWI GGATC 1 cut(s) 1050
AcoI YGGCCR 8 cut(s) 3, 231, 254, 625, 872, 1011, 1470, 1509
AcsI RAATTY 2 cut(s) 92, 104
AfaI GTAC 4 cut(s) 493, 804, 862, 1178
AfiI CCNNNNNNNGG 3 cut(s) 30, 442, 562
AgeI ACCGGT 1 cut(s) 1228
AgsI TTSAA 2 cut(s) 110, 1616
AjnI CCWGG 4 cut(s) 244, 555, 874, 1336
AleI CACNNNNGTG 1 cut(s) 271
Alw21I GWGCWC 3 cut(s) 345, 1309, 1560
Alw26I GTCTC 2 cut(s) 831, 857
AlwI GGATC 1 cut(s) 1050
Ama87I CYCGRG 3 cut(s) 269, 834, 1186
ApeKI GCWGC 1 cut(s) 113
ApoI RAATTY 2 cut(s) 92, 104
ArsI GACNNNNNNTTYG 2 cut(s) 1382, 1414
AsiGI ACCGGT 1 cut(s) 1228
AspLEI GCGC 4 cut(s) 910, 1003, 1070, 1343
AspS9I GGNCC 6 cut(s) 203, 433, 464, 539, 647, 1147
AsuC2I CCSGG 3 cut(s) 958, 1187, 1188
AsuHPI GGTGA 1 cut(s) 1326
AsuII TTCGAA 1 cut(s) 692
AvaI CYCGRG 3 cut(s) 269, 834, 1186
AvaII GGWCC 4 cut(s) 203, 464, 647, 1147
BanI GGYRCC 1 cut(s) 1225
BanII GRGCYC 2 cut(s) 1309, 1508
BauI CACGAG 1 cut(s) 1559
Bbv12I GWGCWC 3 cut(s) 345, 1309, 1560
BbvCI CCTCAGC 1 cut(s) 1461
BbvI GCAGC 1 cut(s) 100
BccI CCATC 2 cut(s) 242, 977
BceAI ACGGC 1 cut(s) 998
BcgI CGANNNNNNTGC 2 cut(s) 1151, 1185
BciT130I CCWGG 4 cut(s) 246, 557, 876, 1338
BciVI GTATCC 1 cut(s) 1602
BclI TGATCA 2 cut(s) 1081, 1579
BcnI CCSGG 3 cut(s) 958, 1187, 1188
BcoDI GTCTC 2 cut(s) 831, 857
BfaI CTAG 3 cut(s) 35, 1433, 1479
BfoI RGCGCY 1 cut(s) 1071
BfuAI ACCTGC 1 cut(s) 1158
BfuI GTATCC 1 cut(s) 1602
BisI GCNGC 4 cut(s) 114, 227, 348, 628
BlsI GCNGC 4 cut(s) 115, 228, 349, 629
BmcAI AGTACT 1 cut(s) 804
Bme1390I CCNGG 7 cut(s) 246, 557, 876, 958, 1187, 1188, 1338
Bme18I GGWCC 4 cut(s) 203, 464, 647, 1147
BmeT110I CYCGRG 3 cut(s) 269, 834, 1186
BmgT120I GGNCC 6 cut(s) 203, 433, 464, 539, 647, 1147
BmiI GGNNCC 3 cut(s) 180, 205, 1227
BmrFI CCNGG 7 cut(s) 246, 557, 876, 958, 1187, 1188, 1338
BmrI ACTGGG 1 cut(s) 875
BmsI GCATC 1 cut(s) 1455
BmuI ACTGGG 1 cut(s) 875
BplI GAGNNNNNCTC 2 cut(s) 1259, 1291
BpmI CTGGAG 1 cut(s) 1476
Bpu10I CCTNAGC 3 cut(s) 437, 1064, 1461
Bpu14I TTCGAA 1 cut(s) 692
BpuEI CTTGAG 1 cut(s) 839
BpuMI CCSGG 3 cut(s) 958, 1187, 1188
BsaI GGTCTC 1 cut(s) 857
BsaJI CCNNGG 8 cut(s) 297, 309, 460, 708, 776, 812, 875, 1186
BsaWI WCCGGW 1 cut(s) 1228
Bsc4I CCNNNNNNNGG 3 cut(s) 30, 442, 562
Bse118I RCCGGY 2 cut(s) 229, 1228
Bse1I ACTGG 3 cut(s) 90, 531, 870
BseBI CCWGG 4 cut(s) 246, 557, 876, 1338
BseDI CCNNGG 8 cut(s) 297, 309, 460, 708, 776, 812, 875, 1186
BseGI GGATG 4 cut(s) 307, 535, 555, 1471
BseLI CCNNNNNNNGG 3 cut(s) 30, 442, 562
BseMII CTCAG 4 cut(s) 30, 1049, 1055, 1452
BseNI ACTGG 3 cut(s) 90, 531, 870
BseX3I CGGCCG 3 cut(s) 625, 1011, 1509
BseXI GCAGC 1 cut(s) 100
Bsh1236I CGCG 5 cut(s) 184, 910, 1001, 1074, 1343
Bsh1285I CGRYCG 3 cut(s) 628, 1014, 1512
BshNI GGYRCC 1 cut(s) 1225
BshTI ACCGGT 1 cut(s) 1228
BsiEI CGRYCG 3 cut(s) 628, 1014, 1512
BsiHKAI GWGCWC 3 cut(s) 345, 1309, 1560
BsiHKCI CYCGRG 3 cut(s) 269, 834, 1186
BsiSI CCGG 5 cut(s) 230, 958, 1187, 1229, 1367
BslFI GGGAC 1 cut(s) 940
BslI CCNNNNNNNGG 3 cut(s) 30, 442, 562
BsmAI GTCTC 2 cut(s) 831, 857
BsmFI GGGAC 1 cut(s) 940
BsmI GAATGC 2 cut(s) 677, 822
Bso31I GGTCTC 1 cut(s) 857
BsoBI CYCGRG 3 cut(s) 269, 834, 1186
Bsp119I TTCGAA 1 cut(s) 692
Bsp1286I GDGCHC 4 cut(s) 345, 1309, 1508, 1560
Bsp143I GATC 4 cut(s) 633, 1055, 1081, 1579
Bsp19I CCATGG 1 cut(s) 776
BspCNI CTCAG 4 cut(s) 29, 1048, 1056, 1453
BspFNI CGCG 5 cut(s) 184, 910, 1001, 1074, 1343
BspLI GGNNCC 3 cut(s) 180, 205, 1227
BspMI ACCTGC 1 cut(s) 1158
BspPI GGATC 1 cut(s) 1050
BspQI GCTCTTC 3 cut(s) 272, 1260, 1297
BspT104I TTCGAA 1 cut(s) 692
BspT107I GGYRCC 1 cut(s) 1225
BspTNI GGTCTC 1 cut(s) 857
BsrFI RCCGGY 2 cut(s) 229, 1228
BsrI ACTGG 3 cut(s) 90, 531, 870
BssAI RCCGGY 2 cut(s) 229, 1228
BssECI CCNNGG 8 cut(s) 297, 309, 460, 708, 776, 812, 875, 1186
BssMI GATC 4 cut(s) 633, 1055, 1081, 1579
BssSI CACGAG 1 cut(s) 1559
BssT1I CCWWGG 4 cut(s) 460, 708, 776, 812
Bst2BI CACGAG 1 cut(s) 1559
Bst2UI CCWGG 4 cut(s) 246, 557, 876, 1338
Bst4CI ACNGT 5 cut(s) 313, 491, 616, 1517, 1542
Bst6I CTCTTC 6 cut(s) 181, 272, 708, 1260, 1297, 1591
BstAPI GCANNNNNTGC 1 cut(s) 1232
BstBI TTCGAA 1 cut(s) 692
BstC8I GCNNGC 3 cut(s) 231, 345, 1072
BstDEI CTNAG 6 cut(s) 16, 437, 1035, 1064, 1260, 1461
BstDSI CCRYGG 2 cut(s) 309, 776
BstF5I GGATG 4 cut(s) 307, 535, 555, 1471
BstFNI CGCG 5 cut(s) 184, 910, 1001, 1074, 1343
BstH2I RGCGCY 1 cut(s) 1071
BstHHI GCGC 4 cut(s) 910, 1003, 1070, 1343
BstKTI GATC 4 cut(s) 636, 1058, 1084, 1582
BstMAI GTCTC 2 cut(s) 831, 857
BstMBI GATC 4 cut(s) 633, 1055, 1081, 1579
BstMCI CGRYCG 3 cut(s) 628, 1014, 1512
BstMWI GCNNNNNNNGC 7 cut(s) 56, 65, 86, 122, 340, 425, 1232
BstNI CCWGG 4 cut(s) 246, 557, 876, 1338
BstNSI RCATGY 1 cut(s) 290
BstSCI CCNGG 7 cut(s) 244, 555, 874, 956, 1185, 1186, 1336
BstUI CGCG 5 cut(s) 184, 910, 1001, 1074, 1343
BstV1I GCAGC 1 cut(s) 100
BstX2I RGATCY 1 cut(s) 1055
BstXI CCANNNNNNTGG 1 cut(s) 252
BstYI RGATCY 1 cut(s) 1055
BstZI CGGCCG 3 cut(s) 625, 1011, 1509
BsuI GTATCC 1 cut(s) 1602
BtgI CCRYGG 2 cut(s) 309, 776
BtsCI GGATG 4 cut(s) 307, 535, 555, 1471
BtsIMutI CAGTG 3 cut(s) 524, 612, 863
BveI ACCTGC 1 cut(s) 1158
Cac8I GCNNGC 3 cut(s) 231, 345, 1072
CfoI GCGC 4 cut(s) 910, 1003, 1070, 1343
Cfr10I RCCGGY 2 cut(s) 229, 1228
Cfr13I GGNCC 6 cut(s) 203, 433, 464, 539, 647, 1147
Cfr9I CCCGGG 1 cut(s) 1186
CseI GACGC 1 cut(s) 899
Csp6I GTAC 4 cut(s) 492, 803, 861, 1177
CspAI ACCGGT 1 cut(s) 1228
CspCI CAANNNNNGTGG 2 cut(s) 1094, 1129
CviAII CATG 9 cut(s) 287, 338, 653, 703, 777, 975, 1450, 1609, 1624
CviQI GTAC 4 cut(s) 492, 803, 861, 1177
DdeI CTNAG 6 cut(s) 16, 437, 1035, 1064, 1260, 1461
DpnI GATC 4 cut(s) 635, 1057, 1083, 1581
DpnII GATC 4 cut(s) 633, 1055, 1081, 1579
EaeI YGGCCR 8 cut(s) 3, 231, 254, 625, 872, 1011, 1470, 1509
EagI CGGCCG 3 cut(s) 625, 1011, 1509
Eam1104I CTCTTC 6 cut(s) 181, 272, 708, 1260, 1297, 1591
EarI CTCTTC 6 cut(s) 181, 272, 708, 1260, 1297, 1591
Ecl136II GAGCTC 1 cut(s) 1307
EclXI CGGCCG 3 cut(s) 625, 1011, 1509
Eco130I CCWWGG 4 cut(s) 460, 708, 776, 812
Eco24I GRGCYC 2 cut(s) 1309, 1508
Eco31I GGTCTC 1 cut(s) 857
Eco47I GGWCC 4 cut(s) 203, 464, 647, 1147
Eco52I CGGCCG 3 cut(s) 625, 1011, 1509
Eco53kI GAGCTC 1 cut(s) 1307
Eco88I CYCGRG 3 cut(s) 269, 834, 1186
EcoICRI GAGCTC 1 cut(s) 1307
EcoO109I RGGNCCY 3 cut(s) 203, 433, 1147
EcoRI GAATTC 1 cut(s) 92
EcoRII CCWGG 4 cut(s) 244, 555, 874, 1336
EcoT14I CCWWGG 4 cut(s) 460, 708, 776, 812
EcoT38I GRGCYC 2 cut(s) 1309, 1508
ErhI CCWWGG 4 cut(s) 460, 708, 776, 812
FaeI CATG 9 cut(s) 290, 341, 656, 706, 780, 978, 1453, 1612, 1627
FaqI GGGAC 1 cut(s) 940
FatI CATG 9 cut(s) 286, 337, 652, 702, 776, 974, 1449, 1608, 1623
FauI CCCGC 1 cut(s) 1079
FauNDI CATATG 1 cut(s) 725
FbaI TGATCA 2 cut(s) 1081, 1579
Fnu4HI GCNGC 4 cut(s) 114, 227, 348, 628
FokI GGATG 4 cut(s) 314, 542, 562, 1478
FriOI GRGCYC 2 cut(s) 1309, 1508
Fsp4HI GCNGC 4 cut(s) 114, 227, 348, 628
FspBI CTAG 3 cut(s) 35, 1433, 1479
GlaI GCGC 4 cut(s) 909, 1002, 1069, 1342
GluI GCNGC 4 cut(s) 114, 227, 348, 628
GsuI CTGGAG 1 cut(s) 1476
HaeII RGCGCY 1 cut(s) 1071
HapII CCGG 5 cut(s) 230, 958, 1187, 1229, 1367
HgaI GACGC 1 cut(s) 899
HhaI GCGC 4 cut(s) 910, 1003, 1070, 1343
Hin1II CATG 9 cut(s) 290, 341, 656, 706, 780, 978, 1453, 1612, 1627
Hin6I GCGC 4 cut(s) 908, 1001, 1068, 1341
HinP1I GCGC 4 cut(s) 908, 1001, 1068, 1341
HincII GTYRAC 1 cut(s) 1119
HindII GTYRAC 1 cut(s) 1119
HinfI GANTC 8 cut(s) 608, 619, 961, 1033, 1182, 1289, 1363, 1475
HpaII CCGG 5 cut(s) 230, 958, 1187, 1229, 1367
HphI GGTGA 1 cut(s) 1326
Hpy166II GTNNAC 7 cut(s) 309, 449, 863, 889, 990, 1119, 1197
Hpy188I TCNGA 4 cut(s) 19, 1032, 1098, 1546
Hpy188III TCNNGA 7 cut(s) 834, 836, 1129, 1299, 1360, 1455, 1598
Hpy8I GTNNAC 7 cut(s) 309, 449, 863, 889, 990, 1119, 1197
HpyAV CCTTC 5 cut(s) 756, 902, 952, 1216, 1315
HpyCH4III ACNGT 5 cut(s) 313, 491, 616, 1517, 1542
HpyCH4V TGCA 6 cut(s) 290, 372, 387, 568, 656, 758
HpyF10VI GCNNNNNNNGC 7 cut(s) 56, 65, 86, 122, 340, 425, 1232
HpyF3I CTNAG 6 cut(s) 16, 437, 1035, 1064, 1260, 1461
Hsp92II CATG 9 cut(s) 290, 341, 656, 706, 780, 978, 1453, 1612, 1627
HspAI GCGC 4 cut(s) 908, 1001, 1068, 1341
KroI GCCGGC 1 cut(s) 229
KroNI GCCGGC 1 cut(s) 231
Ksp22I TGATCA 2 cut(s) 1081, 1579
Kzo9I GATC 4 cut(s) 633, 1055, 1081, 1579
LguI GCTCTTC 3 cut(s) 272, 1260, 1297
LmnI GCTCC 2 cut(s) 819, 1457
Lsp1109I GCAGC 1 cut(s) 100
LweI GCATC 1 cut(s) 1455
MaeI CTAG 3 cut(s) 35, 1433, 1479
MaeIII GTNAC 4 cut(s) 508, 1015, 1332, 1357
MalI GATC 4 cut(s) 635, 1057, 1083, 1581
MboI GATC 4 cut(s) 633, 1055, 1081, 1579
MfeI CAATTG 2 cut(s) 62, 291
MflI RGATCY 1 cut(s) 1055
MhlI GDGCHC 4 cut(s) 345, 1309, 1508, 1560
MluCI AATT 6 cut(s) 62, 92, 104, 291, 1395, 1617
MlyI GAGTC 1 cut(s) 1027
MmeI TCCRAC 2 cut(s) 514, 1121
MroNI GCCGGC 1 cut(s) 229
MseI TTAA 1 cut(s) 761
MslI CAYNNNNRTG 1 cut(s) 271
MspI CCGG 5 cut(s) 230, 958, 1187, 1229, 1367
MspR9I CCNGG 7 cut(s) 246, 557, 876, 958, 1187, 1188, 1338
MunI CAATTG 2 cut(s) 62, 291
Mva1269I GAATGC 2 cut(s) 677, 822
MvaI CCWGG 4 cut(s) 246, 557, 876, 1338
MvnI CGCG 5 cut(s) 184, 910, 1001, 1074, 1343
MwoI GCNNNNNNNGC 7 cut(s) 56, 65, 86, 122, 340, 425, 1232
NaeI GCCGGC 1 cut(s) 231
NciI CCSGG 3 cut(s) 958, 1187, 1188
NcoI CCATGG 1 cut(s) 776
NdeI CATATG 1 cut(s) 725
NdeII GATC 4 cut(s) 633, 1055, 1081, 1579
NgoMIV GCCGGC 1 cut(s) 229
NlaIII CATG 9 cut(s) 290, 341, 656, 706, 780, 978, 1453, 1612, 1627
NlaIV GGNNCC 3 cut(s) 180, 205, 1227
NmeAIII GCCGAG 4 cut(s) 322, 603, 761, 1487
NmuCI GTSAC 4 cut(s) 508, 1015, 1332, 1357
NspI RCATGY 1 cut(s) 290
NspV TTCGAA 1 cut(s) 692
OliI CACNNNNGTG 1 cut(s) 271
PaeR7I CTCGAG 1 cut(s) 834
PciSI GCTCTTC 3 cut(s) 272, 1260, 1297
PcsI WCGNNNNNNNCGW 1 cut(s) 586
PctI GAATGC 2 cut(s) 677, 822
PdiI GCCGGC 1 cut(s) 231
PfeI GAWTC 7 cut(s) 608, 619, 961, 1182, 1289, 1363, 1475
PflFI GACNNNGTC 1 cut(s) 594
PfoI TCCNGGA 1 cut(s) 956
PinAI ACCGGT 1 cut(s) 1228
PkrI GCNGC 4 cut(s) 115, 228, 349, 629
PleI GAGTC 1 cut(s) 1027
PpsI GAGTC 1 cut(s) 1027
PpuMI RGGWCCY 2 cut(s) 203, 1147
Psp124BI GAGCTC 1 cut(s) 1309
Psp5II RGGWCCY 2 cut(s) 203, 1147
Psp6I CCWGG 4 cut(s) 244, 555, 874, 1336
PspGI CCWGG 4 cut(s) 244, 555, 874, 1336
PspN4I GGNNCC 3 cut(s) 180, 205, 1227
PspPI GGNCC 6 cut(s) 203, 433, 464, 539, 647, 1147
PspPPI RGGWCCY 2 cut(s) 203, 1147
PsuI RGATCY 1 cut(s) 1055
PsyI GACNNNGTC 1 cut(s) 594
RsaI GTAC 4 cut(s) 493, 804, 862, 1178
RsaNI GTAC 4 cut(s) 492, 803, 861, 1177
RseI CAYNNNNRTG 1 cut(s) 271
SacI GAGCTC 1 cut(s) 1309
SapI GCTCTTC 3 cut(s) 272, 1260, 1297
SaqAI TTAA 1 cut(s) 761
SatI GCNGC 4 cut(s) 114, 227, 348, 628
Sau3AI GATC 4 cut(s) 633, 1055, 1081, 1579
Sau96I GGNCC 6 cut(s) 203, 433, 464, 539, 647, 1147
ScaI AGTACT 1 cut(s) 804
SchI GAGTC 1 cut(s) 1027
ScrFI CCNGG 7 cut(s) 246, 557, 876, 958, 1187, 1188, 1338
SduI GDGCHC 4 cut(s) 345, 1309, 1508, 1560
SfaNI GCATC 1 cut(s) 1455
Sfr274I CTCGAG 1 cut(s) 834
SfuI TTCGAA 1 cut(s) 692
SinI GGWCC 4 cut(s) 203, 464, 647, 1147
SlaI CTCGAG 1 cut(s) 834
SmaI CCCGGG 1 cut(s) 1188
SmiMI CAYNNNNRTG 1 cut(s) 271
SmlI CTYRAG 2 cut(s) 834, 854
SmoI CTYRAG 2 cut(s) 834, 854
Sse9I AATT 6 cut(s) 62, 92, 104, 291, 1395, 1617
SspMI CTAG 3 cut(s) 35, 1433, 1479
SstI GAGCTC 1 cut(s) 1309
StyD4I CCNGG 7 cut(s) 244, 555, 874, 956, 1185, 1186, 1336
StyI CCWWGG 4 cut(s) 460, 708, 776, 812
TaaI ACNGT 5 cut(s) 313, 491, 616, 1517, 1542
TaqI TCGA 8 cut(s) 263, 395, 411, 589, 692, 835, 1241, 1401
TaqII GACCGA 1 cut(s) 1345
TasI AATT 6 cut(s) 62, 92, 104, 291, 1395, 1617
TatI WGTACW 1 cut(s) 802
TauI GCSGC 3 cut(s) 229, 350, 630
TfiI GAWTC 7 cut(s) 608, 619, 961, 1182, 1289, 1363, 1475
Tru1I TTAA 1 cut(s) 761
Tru9I TTAA 1 cut(s) 761
TscAI CASTG 3 cut(s) 531, 619, 870
TseFI GTSAC 4 cut(s) 508, 1015, 1332, 1357
TseI GCWGC 1 cut(s) 113
Tsp45I GTSAC 4 cut(s) 508, 1015, 1332, 1357
TspDTI ATGAA 4 cut(s) 89, 913, 963, 1548
TspGWI ACGGA 2 cut(s) 456, 1194
TspMI CCCGGG 1 cut(s) 1186
TspRI CASTG 3 cut(s) 531, 619, 870
Tth111I GACNNNGTC 1 cut(s) 594
VpaK11BI GGWCC 4 cut(s) 203, 464, 647, 1147
XapI RAATTY 2 cut(s) 92, 104
XceI RCATGY 1 cut(s) 290
XhoI CTCGAG 1 cut(s) 834
XmaI CCCGGG 1 cut(s) 1186
XspI CTAG 3 cut(s) 35, 1433, 1479
ZrmI AGTACT 1 cut(s) 804
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.