Rmu_sc0022706.1_g000004

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0022706.1
OG0000063
Physical Location & Seq
Forward (+)
17198 .. 19765
2568 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0022706.1_g000004.1.cds

Sequence Viewer

Length: 1212 bp
atgagtgaatcatcaccggtggtcttggcggtggttctgggttctggcgagctgccaggtccgaggaagtctcttggccacaaaacgaagtgtcctatggctgatgatgcttcagaacaagaggccgggtcagagggtagtgatgcaataaaaataaaatcggccgaattcgcaaccaaatttatgaaggcttttgatgcttccaaagacacacttcaaaattccgtagtttgtcagctggcgaaaaacaaagaaccgctgggaatgtgcacactggggccgcattactacgggggcatgccgctggccgtgcaggaggtactagagggttcgttagttgacacttcatgtcttgcttatggggctagttggtccacctggagctctgagttcaaacttccgcgagtttggccaaaactgacccctgagtggagcaaatgggtgccaaggatggagcatttctttgctcaaaaatggaaggactatggaatatatgatagtataaagatgactgagcaagagatacatatggatcggccccttcttgcggcgagcttatgcttctggtcatccgcaaccaacaccatcaacttgcctctcggtcccatgacccctactttgttagacatggccgcaatatttgggtttcggccgaatggcgaggcggtttgtgctacagccaaattccctagttccttccatgctagtctgaaacctaaagcgataaagaatgacaagaaggctaaagatgacgcagaagctaaggcaaagcaattactcaactatagcaccttttatgccacacatgcagttgatgaagcagtttcggaaactaggaggcagcctccaaaacagcacgaacacgccgccttccttctctattggctttgtaagtttgtattttgctccaagtcaaataagtgcacttttgaatttgttggtattgcagaagctcttagcgtgggtaggcctctagcccttgggccatttgttcttgctcgcctctaccgtgctttacgcaatgcagtgatcgataatatgaatttggatattggagggccattatggatgtttcaagtgtggatacagacctattttcacgagctccggtcgacatgtcctccatttgtccccacaatgacacttggcctgtggattgtcccaatagcacctacaatagaggggactgatatctcattagtggctgcatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

403

Amino Acids

44.57

Weight (kDa)

7.55

Isoelectric Point (pI)

41.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000063)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21382 FvH4_1g29794 FvH4_1g29795 FvH4_2g35573 FvH4_2g35574 FvH4_4g18552 FvH4_5g16044
malus_domestica MD05G1017000.v1.1
prunus_persica Prupe.3G140800_v2.0.a1 Prupe.6G164100_v2.0.a1
pyrus_communis pycom01g04330 pycom03g19820 pycom04g06720 pycom06g11360 pycom06g19000 pycom10g08100 pycom13g16660 pycom13g27590 pycom13g27640 pycom13g27890 pycom16g11770 pycom16g19530
rosa_chinensis RchiOBHm_Chr1g0317341 RchiOBHm_Chr1g0317351 RchiOBHm_Chr1g0320431 RchiOBHm_Chr1g0320711 RchiOBHm_Chr1g0320721 RchiOBHm_Chr1g0321611 RchiOBHm_Chr1g0321621 RchiOBHm_Chr1g0321631 RchiOBHm_Chr1g0323651 RchiOBHm_Chr1g0332991 RchiOBHm_Chr1g0333001 RchiOBHm_Chr1g0335981 RchiOBHm_Chr1g0335991 RchiOBHm_Chr1g0336001 RchiOBHm_Chr1g0350201 RchiOBHm_Chr1g0368201 RchiOBHm_Chr2g0105531 RchiOBHm_Chr2g0105541 RchiOBHm_Chr2g0116571 RchiOBHm_Chr2g0116581 RchiOBHm_Chr2g0121071 RchiOBHm_Chr2g0131351 RchiOBHm_Chr2g0131661 RchiOBHm_Chr2g0133021 RchiOBHm_Chr2g0138181 RchiOBHm_Chr2g0138191 RchiOBHm_Chr2g0142701 RchiOBHm_Chr2g0142711 RchiOBHm_Chr2g0152981 RchiOBHm_Chr3g0456181 RchiOBHm_Chr3g0456191 RchiOBHm_Chr3g0493631 RchiOBHm_Chr3g0496201 RchiOBHm_Chr4g0401541 RchiOBHm_Chr4g0410311 RchiOBHm_Chr4g0410321 RchiOBHm_Chr4g0419231 RchiOBHm_Chr4g0419511 RchiOBHm_Chr4g0419521 RchiOBHm_Chr5g0004311 RchiOBHm_Chr5g0004321 RchiOBHm_Chr5g0038131 RchiOBHm_Chr5g0038251 RchiOBHm_Chr5g0038261 RchiOBHm_Chr5g0038271 RchiOBHm_Chr5g0052241 RchiOBHm_Chr5g0053911 RchiOBHm_Chr5g0074641 RchiOBHm_Chr5g0076651 RchiOBHm_Chr5g0076661 RchiOBHm_Chr6g0249161 RchiOBHm_Chr6g0249171 RchiOBHm_Chr6g0250961 RchiOBHm_Chr6g0253701 RchiOBHm_Chr6g0262131 RchiOBHm_Chr6g0263181 RchiOBHm_Chr6g0263231 RchiOBHm_Chr6g0263241 RchiOBHm_Chr6g0263251 RchiOBHm_Chr6g0291271 RchiOBHm_Chr7g0194611 RchiOBHm_Chr7g0219691 RchiOBHm_Chr7g0219701 RchiOBHm_Chr7g0225431 RchiOBHm_Chr7g0234221 RchiOBHm_Chr7g0238711 RchiOBHm_Chr7g0238721 RchiOBHm_Chr7g0238731 RchiOBHm_Chr7g0239611 RchiOBHm_Chr7g0239621
rosa_laevigata RLG00000001361 RLG00000001376 RLG00000001860 RLG00000002051 RLG00000002362 RLG00000008940 RLG00000012764 RLG00000018782 RLG00000029639 RLG00000030151
rosa_multiflora Rmu_co8090794.1_g000001 Rmu_co8135356.1_g000001 Rmu_co8224968.1_g000001 Rmu_sc0000016.1_g000020 Rmu_sc0000029.1_g000061 Rmu_sc0000035.1_g000032 Rmu_sc0000060.1_g000041 Rmu_sc0000148.1_g000041 Rmu_sc0000315.1_g000084 Rmu_sc0000527.1_g000005 Rmu_sc0000527.1_g000007 Rmu_sc0000527.1_g000008 Rmu_sc0000648.1_g000002 Rmu_sc0000762.1_g000076 Rmu_sc0000870.1_g000003 Rmu_sc0000870.1_g000004 Rmu_sc0000948.1_g000037 Rmu_sc0000997.1_g000003 Rmu_sc0001047.1_g000041 Rmu_sc0001047.1_g000042 Rmu_sc0001075.1_g000044 Rmu_sc0001174.1_g000006 Rmu_sc0001235.1_g000025 Rmu_sc0001292.1_g000008 Rmu_sc0001301.1_g000038 Rmu_sc0001461.1_g000069 Rmu_sc0001461.1_g000070 Rmu_sc0001669.1_g000041 Rmu_sc0001689.1_g000027 Rmu_sc0001896.1_g000008 Rmu_sc0001909.1_g000013 Rmu_sc0002170.1_g000038 Rmu_sc0002200.1_g000014 Rmu_sc0002283.1_g000027 Rmu_sc0002284.1_g000014 Rmu_sc0002294.1_g000017 Rmu_sc0002294.1_g000018 Rmu_sc0002307.1_g000020 Rmu_sc0002307.1_g000021 Rmu_sc0002307.1_g000023 Rmu_sc0002357.1_g000054 Rmu_sc0002409.1_g000005 Rmu_sc0002535.1_g000002 Rmu_sc0002589.1_g000014 Rmu_sc0002759.1_g000016 Rmu_sc0002759.1_g000017 Rmu_sc0002777.1_g000015 Rmu_sc0002824.1_g000016 Rmu_sc0002872.1_g000005 Rmu_sc0002872.1_g000012 Rmu_sc0002872.1_g000013 Rmu_sc0002942.1_g000019 Rmu_sc0003337.1_g000001 Rmu_sc0003410.1_g000052 Rmu_sc0003445.1_g000010 Rmu_sc0003773.1_g000007 Rmu_sc0003773.1_g000008 Rmu_sc0003895.1_g000002 Rmu_sc0004063.1_g000006 Rmu_sc0004088.1_g000009 Rmu_sc0004088.1_g000010 Rmu_sc0004174.1_g000027 Rmu_sc0004196.1_g000010 Rmu_sc0004515.1_g000006 Rmu_sc0004727.1_g000010 Rmu_sc0004755.1_g000018 Rmu_sc0005016.1_g000030 Rmu_sc0005026.1_g000001 Rmu_sc0005044.1_g000007 Rmu_sc0005284.1_g000001 Rmu_sc0005431.1_g000030 Rmu_sc0005802.1_g000014 Rmu_sc0005802.1_g000015 Rmu_sc0005994.1_g000004 Rmu_sc0005994.1_g000005 Rmu_sc0006059.1_g000048 Rmu_sc0006583.1_g000013 Rmu_sc0006824.1_g000009 Rmu_sc0007458.1_g000005 Rmu_sc0007707.1_g000002 Rmu_sc0008242.1_g000012 Rmu_sc0008713.1_g000006 Rmu_sc0008770.1_g000008 Rmu_sc0009785.1_g000004 Rmu_sc0009785.1_g000005 Rmu_sc0010125.1_g000001 Rmu_sc0010211.1_g000004 Rmu_sc0011034.1_g000001 Rmu_sc0011833.1_g000006 Rmu_sc0014851.1_g000001 Rmu_sc0014899.1_g000001 Rmu_sc0015060.1_g000003 Rmu_sc0015186.1_g000001 Rmu_sc0015248.1_g000003 Rmu_sc0015248.1_g000004 Rmu_sc0015314.1_g000001 Rmu_sc0018098.1_g000002 Rmu_sc0022706.1_g000004 Rmu_sc0023350.1_g000002 Rmu_sc0027636.1_g000001 Rmu_sc0027672.1_g000003 Rmu_sc0030879.1_g000001 Rmu_ssc0000008.1_g000029 Rmu_ssc0000019.1_g000014 Rmu_ssc0000050.1_g000082 Rmu_ssc0000282.1_g000004 Rmu_ssc0000311.1_g000010
rosa_roxburghii Rroxscaffold_1G00015190 Rroxscaffold_1G00031880 Rroxscaffold_1G00031890 Rroxscaffold_1G00059310 Rroxscaffold_1G00060420 Rroxscaffold_1G00067930 Rroxscaffold_1G00075030 Rroxscaffold_2G00082210 Rroxscaffold_2G00122970 Rroxscaffold_3G00218230 Rroxscaffold_3G00219020 Rroxscaffold_3G00219030 Rroxscaffold_3G00223680 Rroxscaffold_3G00223690 Rroxscaffold_3G00223700 Rroxscaffold_3G00226870 Rroxscaffold_3G00226880 Rroxscaffold_3G00232990 Rroxscaffold_3G00265610 Rroxscaffold_3G00265620 Rroxscaffold_3G00265630 Rroxscaffold_4G00318660 Rroxscaffold_4G00319060 Rroxscaffold_4G00323500 Rroxscaffold_5G00357520 Rroxscaffold_5G00366150 Rroxscaffold_5G00377470 Rroxscaffold_6G00395700 Rroxscaffold_6G00413950 Rroxscaffold_7G00187650 Rroxscaffold_7G00198290 Rroxscaffold_7G00198300 Rroxscaffold_7G00208060
rosa_rugosa Rorug01G0173900 Rorug01G0174000 Rorug01G0174100 Rorug01G0174100 Rorug02G0341200 Rorug04G0135700 Rorug04G0135800 Rorug05G0032500 Rorug06G0021800
rosa_samantha Rh1AG036600 Rh1AG245800 Rh1CG021700 Rh1CG021800 Rh1CG085800 Rh1CG085900 Rh1CG187900 Rh1CG229600 Rh1CG239600 Rh1CG246500 Rh1CG246600 Rh2BG478100 Rh2DG341300 Rh2DG366600 Rh2DG375700 Rh2DG384300 Rh2DG487000 Rh2DG504000 Rh2DG504100 Rh3AG311800 Rh3AG327500 Rh3AG328300 Rh3BG345100 Rh3CG320100 Rh4AG005700 Rh4AG067900 Rh4AG068000 Rh4AG084400 Rh4AG106700 Rh4AG160000 Rh4AG173900 Rh4AG174000 Rh4CG125300 Rh4CG125500 Rh4CG264500 Rh4DG110800 Rh5AG047300 Rh5AG085200 Rh5AG126300 Rh5AG127300 Rh5AG203000 Rh5AG332400 Rh5AG332500 Rh5AG342400 Rh5AG344100 Rh5AG375600 Rh5AG378300 Rh5AG386000 Rh5AG529600 Rh5BG125200 Rh5CG137600 Rh5CG137700 Rh5DG125200 Rh6BG134100 Rh6BG175400 Rh6BG179500 Rh6BG179600 Rh6BG181600 Rh6BG181700 Rh6BG191100 Rh6BG232900 Rh6BG259700 Rh6BG259800 Rh7AG028000 Rh7AG319400 Rh7AG352700 Rh7AG352800 Rh7AG352900 Rh7AG482500 Rh7AG482600 Rh7AG503800 Rh7BG334700 Rh7CG200100 Rh7CG336200 Rh7CG370200 Rh7CG370400 Rh7CG370500
rosa_wichuraiana Rw1G001580 Rw1G003570 Rw1G004260 Rw1G004270 Rw1G021170 Rw2G019390 Rw2G040280 Rw2G044050 Rw4G004430 Rw5G010950 Rw5G018350 Rw5G032890 Rw6G002840 Rw6G006510 Rw6G007780 Rw6G033790 Rw7G036320 Rw7G040550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 442
AccI GTMKAC 1 cut(s) 1112
AccII CGCG 1 cut(s) 403
AclWI GGATC 1 cut(s) 540
AcoI YGGCCR 6 cut(s) 76, 162, 306, 410, 630, 650
AcsI RAATTY 6 cut(s) 167, 179, 220, 683, 932, 1042
AcuI CTGAAG 1 cut(s) 96
AfaI GTAC 1 cut(s) 321
AfiI CCNNNNNNNGG 2 cut(s) 429, 547
AflIII ACRYGT 1 cut(s) 1115
AgeI ACCGGT 1 cut(s) 16
AgsI TTSAA 4 cut(s) 218, 394, 932, 1076
AjnI CCWGG 2 cut(s) 55, 377
AluBI AGCT 7 cut(s) 52, 238, 384, 555, 761, 953, 1105
AluI AGCT 7 cut(s) 52, 238, 384, 555, 761, 953, 1105
Alw21I GWGCWC 4 cut(s) 272, 386, 926, 1107
Alw26I GTCTC 1 cut(s) 75
Alw44I GTGCAC 2 cut(s) 268, 922
AlwI GGATC 1 cut(s) 540
ApaLI GTGCAC 2 cut(s) 268, 922
ApeKI GCWGC 3 cut(s) 52, 841, 1205
ApoI RAATTY 6 cut(s) 167, 179, 220, 683, 932, 1042
ArsI GACNNNNNNTTYG 2 cut(s) 601, 633
AsiGI ACCGGT 1 cut(s) 16
AspS9I GGNCC 7 cut(s) 59, 278, 372, 537, 602, 983, 1058
AsuC2I CCSGG 1 cut(s) 127
AsuHPI GGTGA 1 cut(s) 6
AvaII GGWCC 3 cut(s) 59, 372, 602
BaeGI GKGCMC 2 cut(s) 272, 926
BalI TGGCCA 2 cut(s) 78, 412
BanI GGYRCC 1 cut(s) 442
BanII GRGCYC 2 cut(s) 386, 1107
BauI CACGAG 1 cut(s) 1100
Bbv12I GWGCWC 4 cut(s) 272, 386, 926, 1107
BbvI GCAGC 3 cut(s) 39, 853, 1192
BccI CCATC 2 cut(s) 445, 593
BceAI ACGGC 1 cut(s) 293
BciT130I CCWGG 2 cut(s) 57, 379
BciVI GTATCC 1 cut(s) 1077
BcnI CCSGG 1 cut(s) 127
BcoDI GTCTC 1 cut(s) 75
BfaI CTAG 6 cut(s) 323, 366, 690, 705, 834, 974
BfmI CTRYAG 2 cut(s) 675, 784
BfuI GTATCC 1 cut(s) 1077
BisI GCNGC 8 cut(s) 53, 281, 302, 549, 633, 842, 867, 1206
BlsI GCNGC 8 cut(s) 54, 282, 303, 550, 634, 843, 868, 1207
Bme1390I CCNGG 3 cut(s) 57, 127, 379
Bme18I GGWCC 3 cut(s) 59, 372, 602
BmgT120I GGNCC 7 cut(s) 59, 278, 372, 537, 602, 983, 1058
BmiI GGNNCC 4 cut(s) 279, 444, 539, 604
BmrFI CCNGG 3 cut(s) 57, 127, 379
BmrI ACTGGG 1 cut(s) 284
BmsI GCATC 3 cut(s) 97, 133, 187
BmuI ACTGGG 1 cut(s) 284
BplI GAGNNNNNCTC 4 cut(s) 55, 87, 829, 861
BpmI CTGGAG 1 cut(s) 400
Bpu10I CCTNAGC 1 cut(s) 762
BpuMI CCSGG 1 cut(s) 127
Bsa29I ATCGAT 1 cut(s) 1032
BsaJI CCNNGG 3 cut(s) 62, 446, 979
BsaWI WCCGGW 2 cut(s) 16, 1107
BsaXI ACNNNNNCTCC 2 cut(s) 1105, 1135
Bsc4I CCNNNNNNNGG 2 cut(s) 429, 547
Bse118I RCCGGY 1 cut(s) 16
Bse1I ACTGG 1 cut(s) 279
Bse3DI GCAATG 1 cut(s) 1027
BseBI CCWGG 2 cut(s) 57, 379
BseCI ATCGAT 1 cut(s) 1032
BseDI CCNNGG 3 cut(s) 62, 446, 979
BseGI GGATG 3 cut(s) 456, 569, 1074
BseLI CCNNNNNNNGG 2 cut(s) 429, 547
BseMI GCAATG 1 cut(s) 1027
BseMII CTCAG 3 cut(s) 378, 417, 504
BseNI ACTGG 1 cut(s) 279
BseSI GKGCMC 2 cut(s) 272, 926
BseX3I CGGCCG 2 cut(s) 162, 650
BseXI GCAGC 3 cut(s) 39, 853, 1192
BseYI CCCAGC 1 cut(s) 259
BsgI GTGCAG 1 cut(s) 332
Bsh1236I CGCG 1 cut(s) 403
Bsh1285I CGRYCG 3 cut(s) 165, 653, 1112
BshNI GGYRCC 1 cut(s) 442
BshTI ACCGGT 1 cut(s) 16
BshVI ATCGAT 1 cut(s) 1032
BsiEI CGRYCG 3 cut(s) 165, 653, 1112
BsiHKAI GWGCWC 4 cut(s) 272, 386, 926, 1107
BsiSI CCGG 3 cut(s) 17, 126, 1108
BslFI GGGAC 4 cut(s) 588, 1115, 1145, 1198
BslI CCNNNNNNNGG 2 cut(s) 429, 547
BsmAI GTCTC 1 cut(s) 75
BsmFI GGGAC 4 cut(s) 588, 1115, 1145, 1198
Bsp1286I GDGCHC 4 cut(s) 272, 386, 926, 1107
Bsp143I GATC 2 cut(s) 532, 1029
BspCNI CTCAG 3 cut(s) 379, 418, 505
BspDI ATCGAT 1 cut(s) 1032
BspFNI CGCG 1 cut(s) 403
BspLI GGNNCC 4 cut(s) 279, 444, 539, 604
BspPI GGATC 1 cut(s) 540
BspT107I GGYRCC 1 cut(s) 442
BsrDI GCAATG 1 cut(s) 1027
BsrFI RCCGGY 1 cut(s) 16
BsrI ACTGG 1 cut(s) 279
BssAI RCCGGY 1 cut(s) 16
BssECI CCNNGG 3 cut(s) 62, 446, 979
BssMI GATC 2 cut(s) 532, 1029
BssSI CACGAG 1 cut(s) 1100
BssT1I CCWWGG 2 cut(s) 446, 979
Bst2BI CACGAG 1 cut(s) 1100
Bst2UI CCWGG 2 cut(s) 57, 379
Bst4CI ACNGT 1 cut(s) 1010
BstC8I GCNNGC 6 cut(s) 50, 240, 299, 306, 553, 1000
BstDEI CTNAG 5 cut(s) 387, 426, 513, 762, 956
BstF5I GGATG 3 cut(s) 456, 569, 1074
BstFNI CGCG 1 cut(s) 403
BstKTI GATC 2 cut(s) 535, 1032
BstMAI GTCTC 1 cut(s) 75
BstMBI GATC 2 cut(s) 532, 1029
BstMCI CGRYCG 3 cut(s) 165, 653, 1112
BstMWI GCNNNNNNNGC 8 cut(s) 107, 170, 197, 310, 362, 409, 671, 806
BstNI CCWGG 2 cut(s) 57, 379
BstNSI RCATGY 3 cut(s) 301, 809, 1119
BstSCI CCNGG 3 cut(s) 55, 125, 377
BstSFI CTRYAG 2 cut(s) 675, 784
BstSLI GKGCMC 2 cut(s) 272, 926
BstUI CGCG 1 cut(s) 403
BstV1I GCAGC 3 cut(s) 39, 853, 1192
BstZI CGGCCG 2 cut(s) 162, 650
Bsu15I ATCGAT 1 cut(s) 1032
BsuI GTATCC 1 cut(s) 1077
BsuTUI ATCGAT 1 cut(s) 1032
BtsCI GGATG 3 cut(s) 456, 569, 1074
BtsI GCAGTG 1 cut(s) 1032
BtsIMutI CAGTG 2 cut(s) 272, 1032
Cac8I GCNNGC 6 cut(s) 50, 240, 299, 306, 553, 1000
Cfr10I RCCGGY 1 cut(s) 16
Cfr13I GGNCC 7 cut(s) 59, 278, 372, 537, 602, 983, 1058
ClaI ATCGAT 1 cut(s) 1032
CseI GACGC 1 cut(s) 761
Csp6I GTAC 1 cut(s) 320
CspAI ACCGGT 1 cut(s) 16
CviAII CATG 7 cut(s) 298, 348, 607, 628, 701, 806, 1116
CviQI GTAC 1 cut(s) 320
DdeI CTNAG 5 cut(s) 387, 426, 513, 762, 956
DpnI GATC 2 cut(s) 534, 1031
DpnII GATC 2 cut(s) 532, 1029
EaeI YGGCCR 6 cut(s) 76, 162, 306, 410, 630, 650
EagI CGGCCG 2 cut(s) 162, 650
Ecl136II GAGCTC 2 cut(s) 384, 1105
EclXI CGGCCG 2 cut(s) 162, 650
Eco130I CCWWGG 2 cut(s) 446, 979
Eco147I AGGCCT 1 cut(s) 970
Eco24I GRGCYC 2 cut(s) 386, 1107
Eco32I GATATC 1 cut(s) 1192
Eco47I GGWCC 3 cut(s) 59, 372, 602
Eco52I CGGCCG 2 cut(s) 162, 650
Eco53kI GAGCTC 2 cut(s) 384, 1105
Eco57I CTGAAG 1 cut(s) 96
EcoICRI GAGCTC 2 cut(s) 384, 1105
EcoRI GAATTC 1 cut(s) 167
EcoRII CCWGG 2 cut(s) 55, 377
EcoRV GATATC 1 cut(s) 1192
EcoT14I CCWWGG 2 cut(s) 446, 979
EcoT38I GRGCYC 2 cut(s) 386, 1107
ErhI CCWWGG 2 cut(s) 446, 979
FaeI CATG 7 cut(s) 301, 351, 610, 631, 704, 809, 1119
FalI AAGNNNNNCTT 2 cut(s) 198, 230
FaqI GGGAC 4 cut(s) 588, 1115, 1145, 1198
FatI CATG 7 cut(s) 297, 347, 606, 627, 700, 805, 1115
FauNDI CATATG 1 cut(s) 528
FblI GTMKAC 1 cut(s) 1112
Fnu4HI GCNGC 8 cut(s) 53, 281, 302, 549, 633, 842, 867, 1206
FokI GGATG 3 cut(s) 463, 556, 1081
FriOI GRGCYC 2 cut(s) 386, 1107
Fsp4HI GCNGC 8 cut(s) 53, 281, 302, 549, 633, 842, 867, 1206
FspBI CTAG 6 cut(s) 323, 366, 690, 705, 834, 974
GluI GCNGC 8 cut(s) 53, 281, 302, 549, 633, 842, 867, 1206
GsaI CCCAGC 1 cut(s) 263
GsuI CTGGAG 1 cut(s) 400
HapII CCGG 3 cut(s) 17, 126, 1108
HgaI GACGC 1 cut(s) 761
Hin1II CATG 7 cut(s) 301, 351, 610, 631, 704, 809, 1119
HincII GTYRAC 2 cut(s) 340, 1113
HindII GTYRAC 2 cut(s) 340, 1113
HinfI GANTC 1 cut(s) 8
HpaII CCGG 3 cut(s) 17, 126, 1108
HphI GGTGA 1 cut(s) 6
Hpy166II GTNNAC 5 cut(s) 270, 340, 375, 924, 1113
Hpy188I TCNGA 6 cut(s) 63, 115, 133, 388, 711, 829
Hpy188III TCNNGA 1 cut(s) 1100
Hpy8I GTNNAC 5 cut(s) 270, 340, 375, 924, 1113
HpyAV CCTTC 7 cut(s) 181, 472, 551, 706, 733, 880, 884
HpyCH4III ACNGT 1 cut(s) 1010
HpyCH4V TGCA 8 cut(s) 146, 270, 313, 809, 924, 947, 1025, 1208
HpyF10VI GCNNNNNNNGC 8 cut(s) 107, 170, 197, 310, 362, 409, 671, 806
HpyF3I CTNAG 5 cut(s) 387, 426, 513, 762, 956
Hsp92II CATG 7 cut(s) 301, 351, 610, 631, 704, 809, 1119
Kzo9I GATC 2 cut(s) 532, 1029
LmnI GCTCC 5 cut(s) 381, 432, 454, 911, 1110
Lsp1109I GCAGC 3 cut(s) 39, 853, 1192
LweI GCATC 3 cut(s) 97, 133, 187
MaeI CTAG 6 cut(s) 323, 366, 690, 705, 834, 974
MalI GATC 2 cut(s) 534, 1031
MboI GATC 2 cut(s) 532, 1029
MhlI GDGCHC 4 cut(s) 272, 386, 926, 1107
MlsI TGGCCA 2 cut(s) 78, 412
MluCI AATT 7 cut(s) 167, 179, 220, 683, 773, 932, 1042
MluNI TGGCCA 2 cut(s) 78, 412
Mox20I TGGCCA 2 cut(s) 78, 412
MscI TGGCCA 2 cut(s) 78, 412
Msp20I TGGCCA 2 cut(s) 78, 412
MspA1I CMGCKG 3 cut(s) 238, 259, 304
MspI CCGG 3 cut(s) 17, 126, 1108
MspR9I CCNGG 3 cut(s) 57, 127, 379
MvaI CCWGG 2 cut(s) 57, 379
MvnI CGCG 1 cut(s) 403
MwoI GCNNNNNNNGC 8 cut(s) 107, 170, 197, 310, 362, 409, 671, 806
NciI CCSGG 1 cut(s) 127
NdeI CATATG 1 cut(s) 528
NdeII GATC 2 cut(s) 532, 1029
NlaIII CATG 7 cut(s) 301, 351, 610, 631, 704, 809, 1119
NlaIV GGNNCC 4 cut(s) 279, 444, 539, 604
NspI RCATGY 3 cut(s) 301, 809, 1119
PaeI GCATGC 1 cut(s) 301
PceI AGGCCT 1 cut(s) 970
PciI ACATGT 1 cut(s) 1115
PcsI WCGNNNNNNNCGW 1 cut(s) 1006
PfeI GAWTC 1 cut(s) 8
PinAI ACCGGT 1 cut(s) 16
PkrI GCNGC 8 cut(s) 54, 282, 303, 550, 634, 843, 868, 1207
PscI ACATGT 1 cut(s) 1115
Psp124BI GAGCTC 2 cut(s) 386, 1107
Psp6I CCWGG 2 cut(s) 55, 377
PspFI CCCAGC 1 cut(s) 259
PspGI CCWGG 2 cut(s) 55, 377
PspN4I GGNNCC 4 cut(s) 279, 444, 539, 604
PspPI GGNCC 7 cut(s) 59, 278, 372, 537, 602, 983, 1058
PvuII CAGCTG 1 cut(s) 238
RsaI GTAC 1 cut(s) 321
RsaNI GTAC 1 cut(s) 320
SacI GAGCTC 2 cut(s) 386, 1107
SalI GTCGAC 1 cut(s) 1111
SatI GCNGC 8 cut(s) 53, 281, 302, 549, 633, 842, 867, 1206
Sau3AI GATC 2 cut(s) 532, 1029
Sau96I GGNCC 7 cut(s) 59, 278, 372, 537, 602, 983, 1058
ScrFI CCNGG 3 cut(s) 57, 127, 379
SduI GDGCHC 4 cut(s) 272, 386, 926, 1107
SfaNI GCATC 3 cut(s) 97, 133, 187
SfcI CTRYAG 2 cut(s) 675, 784
SgrAI CRCCGGYG 1 cut(s) 16
SinI GGWCC 3 cut(s) 59, 372, 602
SphI GCATGC 1 cut(s) 301
Sse9I AATT 7 cut(s) 167, 179, 220, 683, 773, 932, 1042
SseBI AGGCCT 1 cut(s) 970
SspI AATATT 1 cut(s) 639
SspMI CTAG 6 cut(s) 323, 366, 690, 705, 834, 974
SstI GAGCTC 2 cut(s) 386, 1107
StuI AGGCCT 1 cut(s) 970
StyD4I CCNGG 3 cut(s) 55, 125, 377
StyI CCWWGG 2 cut(s) 446, 979
TaaI ACNGT 1 cut(s) 1010
TaqI TCGA 2 cut(s) 1032, 1112
TaqII GACCGA 1 cut(s) 590
TasI AATT 7 cut(s) 167, 179, 220, 683, 773, 932, 1042
TauI GCSGC 5 cut(s) 283, 304, 551, 635, 869
TfiI GAWTC 1 cut(s) 8
TscAI CASTG 2 cut(s) 279, 1032
TseI GCWGC 3 cut(s) 52, 841, 1205
TspDTI ATGAA 4 cut(s) 200, 336, 831, 1055
TspGWI ACGGA 1 cut(s) 214
TspRI CASTG 2 cut(s) 279, 1032
VneI GTGCAC 2 cut(s) 268, 922
VpaK11BI GGWCC 3 cut(s) 59, 372, 602
XapI RAATTY 6 cut(s) 167, 179, 220, 683, 932, 1042
XceI RCATGY 3 cut(s) 301, 809, 1119
XmiI GTMKAC 1 cut(s) 1112
XspI CTAG 6 cut(s) 323, 366, 690, 705, 834, 974
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.