Rmu_sc0001689.1_g000027

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001689.1
OG0000063
Physical Location & Seq
Forward (+)
144460 .. 149316
4857 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001689.1_g000027.1.cds

Sequence Viewer

Length: 2205 bp
atggtggaggctctgagttctttgtttactaattggcgaggcacaatggtgggcagcagcggagtggcgaagctggtgaataagaacagctcaaattttctgcaggtgaggatggtgttgaggccgaagttgtcggctaaaccgatgaagttgcgaaaagaaagaaagaatttaagggtaaatcggtcattttggactttcaagtggtggaggaagaagcagtccttatccccaaacccaatcgagaagcagcggaggatgacgttgttgagagagaacgagagtggtggtggtcaagtcattggcgacggcggcggggatgaactagaagtgtgcggaaaatggcctggtgaaacggccaactggattccgtgggtagaacgagtcgagaagcgatttggggaaatatgtaaacgacttgggatctatgatgccatcaagctgtccactattactattccttgtgaccgccccttgctggctgccgctatgtgtttttggagttctcaaacaaactctctggagcttcagtttggtgcacttagtccgaccttgattgatatagcggccatcataggcctgccgccacatgggcaggtggtggacatcgtatttgcagaaggaaagtatgacattgatcttggctgcgagctaagagatcgaactaagggcagaccagccgttgctaattttaatagatggattgaggtgtttaacaacggtttgggaaacaagtcacttaatagtaatggcagtccagaagagaaaggggaaagccaacaagagacaatggaagtaactcatgtagagcatgctgcgtttcttgccttttggatatgtaagttcttagtgtgcacaacttctacaaaagtgaatgtggagaactacaagttggctgaagcattagcaagtaaagcattgtggctgcacacttactttccctctttcagacagtcgggtttagcattggccgttgacaccactcttggacaacaattggctcctcttgatttacttcctcattcggcagaagagtgttttgaggtgttgttcaagtgtccagagttttctgcagaacagtttgccgtttgtttcagtaggaaatatccaccctaccttgcaatggatatcagccaacacgcctcagaaagtgagatgagatgggagactgcgtgttcagcttggaagagtgcaataggtatgatggatctcttctggggtgccttgtctggtaaaacactcaagtgtggagtggagttatattcaccatcctatttcagtcgtcagttgggatattatcaagctataccggctccggtgccagaatcgtcaaaccgatatagttcattgcgagccgttttctccaataaggacgacattgagcagaataacaaagcgtttgtgtacaacatgagctttcccatgaagataagagtagtaactagcaagagttcctcccagttcagagagtggtgggcgaaacgagtaggtagccgctttaaagatgggttggtgtcggctaggcaatcggcttttgcaggaaatccatgggcacaagagaagccgaaagctgtaaggcgtgatggccaaccaagtagtgacgaacctgtgggggagataatttctcttgaaagaatggctgaaagcgaagttgagacaatgaatatggaagaaacacttgtgctcacccaaacttcaacgcaagccagtattccctcctcgtcgcttagtgagcaacacctggtgttggctaatgaactagaatgtaataaggggtttgaagccgaacttcaggcttttatgagggcattttcggccgatgctctaatccaaccagaatgctgctcggccatttcacagttacctctcgctcaattgacatcaagggaggaagttgatggggctttgaaggtgaaagccttggttcccgagtttgggtggtgtatggaacaaaaacgggttgtggagtctcttgaaagcaagataaatgagttggaaagacaattggcgtccttgaagcaagagagacaagaagtgggggaaaagctccttcaaaggagtaagcagtgtttccaaagccaaggacaactgaaaaaaatagaggccgaattgaaaagttccgagcctaggtgtatgcaacttgagagtgaccttcaggacactagttgtaccttgggagctcttaaagctttattagccgagtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

734

Amino Acids

82.34

Weight (kDa)

7.03

Isoelectric Point (pI)

49.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000063)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21382 FvH4_1g29794 FvH4_1g29795 FvH4_2g35573 FvH4_2g35574 FvH4_4g18552 FvH4_5g16044
malus_domestica MD05G1017000.v1.1
prunus_persica Prupe.3G140800_v2.0.a1 Prupe.6G164100_v2.0.a1
pyrus_communis pycom01g04330 pycom03g19820 pycom04g06720 pycom06g11360 pycom06g19000 pycom10g08100 pycom13g16660 pycom13g27590 pycom13g27640 pycom13g27890 pycom16g11770 pycom16g19530
rosa_chinensis RchiOBHm_Chr1g0317341 RchiOBHm_Chr1g0317351 RchiOBHm_Chr1g0320431 RchiOBHm_Chr1g0320711 RchiOBHm_Chr1g0320721 RchiOBHm_Chr1g0321611 RchiOBHm_Chr1g0321621 RchiOBHm_Chr1g0321631 RchiOBHm_Chr1g0323651 RchiOBHm_Chr1g0332991 RchiOBHm_Chr1g0333001 RchiOBHm_Chr1g0335981 RchiOBHm_Chr1g0335991 RchiOBHm_Chr1g0336001 RchiOBHm_Chr1g0350201 RchiOBHm_Chr1g0368201 RchiOBHm_Chr2g0105531 RchiOBHm_Chr2g0105541 RchiOBHm_Chr2g0116571 RchiOBHm_Chr2g0116581 RchiOBHm_Chr2g0121071 RchiOBHm_Chr2g0131351 RchiOBHm_Chr2g0131661 RchiOBHm_Chr2g0133021 RchiOBHm_Chr2g0138181 RchiOBHm_Chr2g0138191 RchiOBHm_Chr2g0142701 RchiOBHm_Chr2g0142711 RchiOBHm_Chr2g0152981 RchiOBHm_Chr3g0456181 RchiOBHm_Chr3g0456191 RchiOBHm_Chr3g0493631 RchiOBHm_Chr3g0496201 RchiOBHm_Chr4g0401541 RchiOBHm_Chr4g0410311 RchiOBHm_Chr4g0410321 RchiOBHm_Chr4g0419231 RchiOBHm_Chr4g0419511 RchiOBHm_Chr4g0419521 RchiOBHm_Chr5g0004311 RchiOBHm_Chr5g0004321 RchiOBHm_Chr5g0038131 RchiOBHm_Chr5g0038251 RchiOBHm_Chr5g0038261 RchiOBHm_Chr5g0038271 RchiOBHm_Chr5g0052241 RchiOBHm_Chr5g0053911 RchiOBHm_Chr5g0074641 RchiOBHm_Chr5g0076651 RchiOBHm_Chr5g0076661 RchiOBHm_Chr6g0249161 RchiOBHm_Chr6g0249171 RchiOBHm_Chr6g0250961 RchiOBHm_Chr6g0253701 RchiOBHm_Chr6g0262131 RchiOBHm_Chr6g0263181 RchiOBHm_Chr6g0263231 RchiOBHm_Chr6g0263241 RchiOBHm_Chr6g0263251 RchiOBHm_Chr6g0291271 RchiOBHm_Chr7g0194611 RchiOBHm_Chr7g0219691 RchiOBHm_Chr7g0219701 RchiOBHm_Chr7g0225431 RchiOBHm_Chr7g0234221 RchiOBHm_Chr7g0238711 RchiOBHm_Chr7g0238721 RchiOBHm_Chr7g0238731 RchiOBHm_Chr7g0239611 RchiOBHm_Chr7g0239621
rosa_laevigata RLG00000001361 RLG00000001376 RLG00000001860 RLG00000002051 RLG00000002362 RLG00000008940 RLG00000012764 RLG00000018782 RLG00000029639 RLG00000030151
rosa_multiflora Rmu_co8090794.1_g000001 Rmu_co8135356.1_g000001 Rmu_co8224968.1_g000001 Rmu_sc0000016.1_g000020 Rmu_sc0000029.1_g000061 Rmu_sc0000035.1_g000032 Rmu_sc0000060.1_g000041 Rmu_sc0000148.1_g000041 Rmu_sc0000315.1_g000084 Rmu_sc0000527.1_g000005 Rmu_sc0000527.1_g000007 Rmu_sc0000527.1_g000008 Rmu_sc0000648.1_g000002 Rmu_sc0000762.1_g000076 Rmu_sc0000870.1_g000003 Rmu_sc0000870.1_g000004 Rmu_sc0000948.1_g000037 Rmu_sc0000997.1_g000003 Rmu_sc0001047.1_g000041 Rmu_sc0001047.1_g000042 Rmu_sc0001075.1_g000044 Rmu_sc0001174.1_g000006 Rmu_sc0001235.1_g000025 Rmu_sc0001292.1_g000008 Rmu_sc0001301.1_g000038 Rmu_sc0001461.1_g000069 Rmu_sc0001461.1_g000070 Rmu_sc0001669.1_g000041 Rmu_sc0001689.1_g000027 Rmu_sc0001896.1_g000008 Rmu_sc0001909.1_g000013 Rmu_sc0002170.1_g000038 Rmu_sc0002200.1_g000014 Rmu_sc0002283.1_g000027 Rmu_sc0002284.1_g000014 Rmu_sc0002294.1_g000017 Rmu_sc0002294.1_g000018 Rmu_sc0002307.1_g000020 Rmu_sc0002307.1_g000021 Rmu_sc0002307.1_g000023 Rmu_sc0002357.1_g000054 Rmu_sc0002409.1_g000005 Rmu_sc0002535.1_g000002 Rmu_sc0002589.1_g000014 Rmu_sc0002759.1_g000016 Rmu_sc0002759.1_g000017 Rmu_sc0002777.1_g000015 Rmu_sc0002824.1_g000016 Rmu_sc0002872.1_g000005 Rmu_sc0002872.1_g000012 Rmu_sc0002872.1_g000013 Rmu_sc0002942.1_g000019 Rmu_sc0003337.1_g000001 Rmu_sc0003410.1_g000052 Rmu_sc0003445.1_g000010 Rmu_sc0003773.1_g000007 Rmu_sc0003773.1_g000008 Rmu_sc0003895.1_g000002 Rmu_sc0004063.1_g000006 Rmu_sc0004088.1_g000009 Rmu_sc0004088.1_g000010 Rmu_sc0004174.1_g000027 Rmu_sc0004196.1_g000010 Rmu_sc0004515.1_g000006 Rmu_sc0004727.1_g000010 Rmu_sc0004755.1_g000018 Rmu_sc0005016.1_g000030 Rmu_sc0005026.1_g000001 Rmu_sc0005044.1_g000007 Rmu_sc0005284.1_g000001 Rmu_sc0005431.1_g000030 Rmu_sc0005802.1_g000014 Rmu_sc0005802.1_g000015 Rmu_sc0005994.1_g000004 Rmu_sc0005994.1_g000005 Rmu_sc0006059.1_g000048 Rmu_sc0006583.1_g000013 Rmu_sc0006824.1_g000009 Rmu_sc0007458.1_g000005 Rmu_sc0007707.1_g000002 Rmu_sc0008242.1_g000012 Rmu_sc0008713.1_g000006 Rmu_sc0008770.1_g000008 Rmu_sc0009785.1_g000004 Rmu_sc0009785.1_g000005 Rmu_sc0010125.1_g000001 Rmu_sc0010211.1_g000004 Rmu_sc0011034.1_g000001 Rmu_sc0011833.1_g000006 Rmu_sc0014851.1_g000001 Rmu_sc0014899.1_g000001 Rmu_sc0015060.1_g000003 Rmu_sc0015186.1_g000001 Rmu_sc0015248.1_g000003 Rmu_sc0015248.1_g000004 Rmu_sc0015314.1_g000001 Rmu_sc0018098.1_g000002 Rmu_sc0022706.1_g000004 Rmu_sc0023350.1_g000002 Rmu_sc0027636.1_g000001 Rmu_sc0027672.1_g000003 Rmu_sc0030879.1_g000001 Rmu_ssc0000008.1_g000029 Rmu_ssc0000019.1_g000014 Rmu_ssc0000050.1_g000082 Rmu_ssc0000282.1_g000004 Rmu_ssc0000311.1_g000010
rosa_roxburghii Rroxscaffold_1G00015190 Rroxscaffold_1G00031880 Rroxscaffold_1G00031890 Rroxscaffold_1G00059310 Rroxscaffold_1G00060420 Rroxscaffold_1G00067930 Rroxscaffold_1G00075030 Rroxscaffold_2G00082210 Rroxscaffold_2G00122970 Rroxscaffold_3G00218230 Rroxscaffold_3G00219020 Rroxscaffold_3G00219030 Rroxscaffold_3G00223680 Rroxscaffold_3G00223690 Rroxscaffold_3G00223700 Rroxscaffold_3G00226870 Rroxscaffold_3G00226880 Rroxscaffold_3G00232990 Rroxscaffold_3G00265610 Rroxscaffold_3G00265620 Rroxscaffold_3G00265630 Rroxscaffold_4G00318660 Rroxscaffold_4G00319060 Rroxscaffold_4G00323500 Rroxscaffold_5G00357520 Rroxscaffold_5G00366150 Rroxscaffold_5G00377470 Rroxscaffold_6G00395700 Rroxscaffold_6G00413950 Rroxscaffold_7G00187650 Rroxscaffold_7G00198290 Rroxscaffold_7G00198300 Rroxscaffold_7G00208060
rosa_rugosa Rorug01G0173900 Rorug01G0174000 Rorug01G0174100 Rorug01G0174100 Rorug02G0341200 Rorug04G0135700 Rorug04G0135800 Rorug05G0032500 Rorug06G0021800
rosa_samantha Rh1AG036600 Rh1AG245800 Rh1CG021700 Rh1CG021800 Rh1CG085800 Rh1CG085900 Rh1CG187900 Rh1CG229600 Rh1CG239600 Rh1CG246500 Rh1CG246600 Rh2BG478100 Rh2DG341300 Rh2DG366600 Rh2DG375700 Rh2DG384300 Rh2DG487000 Rh2DG504000 Rh2DG504100 Rh3AG311800 Rh3AG327500 Rh3AG328300 Rh3BG345100 Rh3CG320100 Rh4AG005700 Rh4AG067900 Rh4AG068000 Rh4AG084400 Rh4AG106700 Rh4AG160000 Rh4AG173900 Rh4AG174000 Rh4CG125300 Rh4CG125500 Rh4CG264500 Rh4DG110800 Rh5AG047300 Rh5AG085200 Rh5AG126300 Rh5AG127300 Rh5AG203000 Rh5AG332400 Rh5AG332500 Rh5AG342400 Rh5AG344100 Rh5AG375600 Rh5AG378300 Rh5AG386000 Rh5AG529600 Rh5BG125200 Rh5CG137600 Rh5CG137700 Rh5DG125200 Rh6BG134100 Rh6BG175400 Rh6BG179500 Rh6BG179600 Rh6BG181600 Rh6BG181700 Rh6BG191100 Rh6BG232900 Rh6BG259700 Rh6BG259800 Rh7AG028000 Rh7AG319400 Rh7AG352700 Rh7AG352800 Rh7AG352900 Rh7AG482500 Rh7AG482600 Rh7AG503800 Rh7BG334700 Rh7CG200100 Rh7CG336200 Rh7CG370200 Rh7CG370400 Rh7CG370500
rosa_wichuraiana Rw1G001580 Rw1G003570 Rw1G004260 Rw1G004270 Rw1G021170 Rw2G019390 Rw2G040280 Rw2G044050 Rw4G004430 Rw5G010950 Rw5G018350 Rw5G032890 Rw6G002840 Rw6G006510 Rw6G007780 Rw6G033790 Rw7G036320 Rw7G040550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 94, 586
Acc36I ACCTGC 2 cut(s) 94, 586
AccB1I GGYRCC 2 cut(s) 1220, 1318
AclWI GGATC 2 cut(s) 431, 1215
AcoI YGGCCR 6 cut(s) 357, 567, 969, 1585, 1815, 1848
AcsI RAATTY 2 cut(s) 94, 169
AcuI CTGAAG 4 cut(s) 512, 918, 1775, 2138
AcyI GRCGYC 1 cut(s) 2009
AdeI CACNNNGTG 1 cut(s) 1744
AfaI GTAC 2 cut(s) 1406, 2170
AfiI CCNNNNNNNGG 7 cut(s) 478, 590, 1123, 1747, 1934, 1935, 2127
AhlI ACTAGT 1 cut(s) 2162
AjnI CCWGG 2 cut(s) 346, 1740
AjuI GAANNNNNNNTTGG 2 cut(s) 875, 907
AleI CACNNNNGTG 2 cut(s) 47, 1243
Alw21I GWGCWC 4 cut(s) 541, 857, 1686, 2182
Alw26I GTCTC 5 cut(s) 779, 1160, 1649, 1974, 2020
Alw44I GTGCAC 2 cut(s) 537, 853
AlwI GGATC 2 cut(s) 431, 1215
Ama87I CYCGRG 1 cut(s) 1928
ApaLI GTGCAC 2 cut(s) 537, 853
ApeKI GCWGC 8 cut(s) 54, 57, 250, 482, 645, 815, 925, 1842
ApoI RAATTY 2 cut(s) 94, 169
ArsI GACNNNNNNTTYG 2 cut(s) 596, 628
AspA2I CCTAGG 1 cut(s) 2126
AsuHPI GGTGA 6 cut(s) 88, 118, 362, 1257, 1678, 1924
AvaI CYCGRG 1 cut(s) 1928
AvrII CCTAGG 1 cut(s) 2126
BaeGI GKGCMC 3 cut(s) 541, 857, 1555
BalI TGGCCA 1 cut(s) 1587
BanI GGYRCC 2 cut(s) 1220, 1318
BanII GRGCYC 1 cut(s) 2182
Bbv12I GWGCWC 4 cut(s) 541, 857, 1686, 2182
BbvI GCAGC 8 cut(s) 66, 69, 262, 469, 632, 802, 912, 1829
BceAI ACGGC 6 cut(s) 325, 372, 665, 956, 1070, 1340
BcgI CGANNNNNNTGC 2 cut(s) 133, 167
BciT130I CCWGG 2 cut(s) 348, 1742
BcoDI GTCTC 5 cut(s) 779, 1160, 1649, 1974, 2020
BcuI ACTAGT 1 cut(s) 2162
BfaI CTAG 6 cut(s) 326, 1443, 1521, 1760, 2127, 2163
BfmI CTRYAG 2 cut(s) 101, 1071
BfuAI ACCTGC 2 cut(s) 94, 586
BglI GCCNNNNNGGC 1 cut(s) 592
BlnI CCTAGG 1 cut(s) 2126
Bme1390I CCNGG 2 cut(s) 348, 1742
BmeT110I CYCGRG 1 cut(s) 1928
BmiI GGNNCC 5 cut(s) 1002, 1222, 1314, 1320, 1926
BmrFI CCNGG 2 cut(s) 348, 1742
BmrI ACTGGG 1 cut(s) 1453
BmsI GCATC 2 cut(s) 421, 1810
BmuI ACTGGG 1 cut(s) 1453
BpmI CTGGAG 1 cut(s) 542
BpuEI CTTGAG 2 cut(s) 1226, 2162
BsaHI GRCGYC 1 cut(s) 2009
BsaJI CCNNGG 6 cut(s) 371, 1547, 1920, 2080, 2126, 2172
BsaWI WCCGGW 1 cut(s) 1315
BsaXI ACNNNNNCTCC 4 cut(s) 515, 545, 1157, 1187
Bsc4I CCNNNNNNNGG 7 cut(s) 478, 590, 1123, 1747, 1934, 1935, 2127
Bse118I RCCGGY 1 cut(s) 1309
Bse1I ACTGG 3 cut(s) 368, 1459, 1707
Bse3DI GCAATG 2 cut(s) 1128, 1346
BseBI CCWGG 2 cut(s) 348, 1742
BseDI CCNNGG 6 cut(s) 371, 1547, 1920, 2080, 2126, 2172
BseGI GGATG 4 cut(s) 117, 264, 325, 1268
BseLI CCNNNNNNNGG 7 cut(s) 478, 590, 1123, 1747, 1934, 1935, 2127
BseMI GCAATG 2 cut(s) 1128, 1346
BseMII CTCAG 2 cut(s) 5, 1158
BseNI ACTGG 3 cut(s) 368, 1459, 1707
BseRI GAGGAG 2 cut(s) 993, 1708
BseSI GKGCMC 3 cut(s) 541, 857, 1555
BseX3I CGGCCG 1 cut(s) 1815
BseXI GCAGC 8 cut(s) 66, 69, 262, 469, 632, 802, 912, 1829
BsgI GTGCAG 1 cut(s) 911
Bsh1285I CGRYCG 1 cut(s) 1818
BshNI GGYRCC 2 cut(s) 1220, 1318
BsiEI CGRYCG 1 cut(s) 1818
BsiHKAI GWGCWC 4 cut(s) 541, 857, 1686, 2182
BsiHKCI CYCGRG 1 cut(s) 1928
BsiSI CCGG 2 cut(s) 1310, 1316
BslI CCNNNNNNNGG 7 cut(s) 478, 590, 1123, 1747, 1934, 1935, 2127
BsmAI GTCTC 5 cut(s) 779, 1160, 1649, 1974, 2020
BsmI GAATGC 1 cut(s) 1844
BsoBI CYCGRG 1 cut(s) 1928
Bsp1286I GDGCHC 5 cut(s) 541, 857, 1555, 1686, 2182
Bsp1407I TGTACA 1 cut(s) 1404
Bsp143I GATC 4 cut(s) 423, 637, 658, 1207
Bsp19I CCATGG 1 cut(s) 1547
BspCNI CTCAG 2 cut(s) 6, 1157
BspLI GGNNCC 5 cut(s) 1002, 1222, 1314, 1320, 1926
BspMAI CTGCAG 2 cut(s) 105, 1075
BspMI ACCTGC 2 cut(s) 94, 586
BspPI GGATC 2 cut(s) 431, 1215
BspT107I GGYRCC 2 cut(s) 1220, 1318
BsrDI GCAATG 2 cut(s) 1128, 1346
BsrFI RCCGGY 1 cut(s) 1309
BsrGI TGTACA 1 cut(s) 1404
BsrI ACTGG 3 cut(s) 368, 1459, 1707
BssAI RCCGGY 1 cut(s) 1309
BssECI CCNNGG 6 cut(s) 371, 1547, 1920, 2080, 2126, 2172
BssMI GATC 4 cut(s) 423, 637, 658, 1207
BssNI GRCGYC 1 cut(s) 2009
BssT1I CCWWGG 5 cut(s) 1547, 1920, 2080, 2126, 2172
Bst2UI CCWGG 2 cut(s) 348, 1742
Bst4CI ACNGT 4 cut(s) 722, 954, 1080, 1860
Bst6I CTCTTC 4 cut(s) 756, 1026, 1181, 1217
BstACI GRCGYC 1 cut(s) 2009
BstAUI TGTACA 1 cut(s) 1404
BstC8I GCNNGC 6 cut(s) 480, 581, 650, 813, 1353, 1704
BstDEI CTNAG 7 cut(s) 14, 542, 653, 666, 847, 1144, 1727
BstDSI CCRYGG 2 cut(s) 371, 1547
BstF5I GGATG 4 cut(s) 117, 264, 325, 1268
BstKTI GATC 4 cut(s) 426, 640, 661, 1210
BstMAI GTCTC 5 cut(s) 779, 1160, 1649, 1974, 2020
BstMBI GATC 4 cut(s) 423, 637, 658, 1207
BstMCI CGRYCG 1 cut(s) 1818
BstNI CCWGG 2 cut(s) 348, 1742
BstNSI RCATGY 1 cut(s) 815
BstSCI CCNGG 2 cut(s) 346, 1740
BstSFI CTRYAG 2 cut(s) 101, 1071
BstSLI GKGCMC 3 cut(s) 541, 857, 1555
BstV1I GCAGC 8 cut(s) 66, 69, 262, 469, 632, 802, 912, 1829
BstX2I RGATCY 2 cut(s) 423, 1207
BstYI RGATCY 2 cut(s) 423, 1207
BstZI CGGCCG 1 cut(s) 1815
BtgI CCRYGG 2 cut(s) 371, 1547
BtsCI GGATG 4 cut(s) 117, 264, 325, 1268
BtsI GCAGTG 1 cut(s) 2072
BtsIMutI CAGTG 1 cut(s) 2072
BveI ACCTGC 2 cut(s) 94, 586
Cac8I GCNNGC 6 cut(s) 480, 581, 650, 813, 1353, 1704
Cfr10I RCCGGY 1 cut(s) 1309
CseI GACGC 1 cut(s) 1998
CsiI ACCWGGT 1 cut(s) 1740
Csp6I GTAC 2 cut(s) 1405, 2169
CviAII CATG 6 cut(s) 590, 803, 812, 1411, 1423, 1548
CviQI GTAC 2 cut(s) 1405, 2169
DdeI CTNAG 7 cut(s) 14, 542, 653, 666, 847, 1144, 1727
DpnI GATC 4 cut(s) 425, 639, 660, 1209
DpnII GATC 4 cut(s) 423, 637, 658, 1207
DraI TTTAAA 1 cut(s) 1501
DraIII CACNNNGTG 1 cut(s) 1744
EaeI YGGCCR 6 cut(s) 357, 567, 969, 1585, 1815, 1848
EagI CGGCCG 1 cut(s) 1815
Eam1104I CTCTTC 4 cut(s) 756, 1026, 1181, 1217
EarI CTCTTC 4 cut(s) 756, 1026, 1181, 1217
Ecl136II GAGCTC 1 cut(s) 2180
EclXI CGGCCG 1 cut(s) 1815
Eco130I CCWWGG 5 cut(s) 1547, 1920, 2080, 2126, 2172
Eco147I AGGCCT 1 cut(s) 579
Eco24I GRGCYC 1 cut(s) 2182
Eco32I GATATC 1 cut(s) 1129
Eco52I CGGCCG 1 cut(s) 1815
Eco53kI GAGCTC 1 cut(s) 2180
Eco57I CTGAAG 4 cut(s) 512, 918, 1775, 2138
Eco88I CYCGRG 1 cut(s) 1928
EcoICRI GAGCTC 1 cut(s) 2180
EcoRII CCWGG 2 cut(s) 346, 1740
EcoRV GATATC 1 cut(s) 1129
EcoT14I CCWWGG 5 cut(s) 1547, 1920, 2080, 2126, 2172
EcoT38I GRGCYC 1 cut(s) 2182
ErhI CCWWGG 5 cut(s) 1547, 1920, 2080, 2126, 2172
FaeI CATG 6 cut(s) 593, 806, 815, 1414, 1426, 1551
FalI AAGNNNNNCTT 6 cut(s) 209, 241, 1662, 1694, 1773, 1805
FatI CATG 6 cut(s) 589, 802, 811, 1410, 1422, 1547
FauI CCCGC 1 cut(s) 308
FokI GGATG 4 cut(s) 124, 271, 332, 1255
FriOI GRGCYC 1 cut(s) 2182
FspBI CTAG 6 cut(s) 326, 1443, 1521, 1760, 2127, 2163
GsuI CTGGAG 1 cut(s) 542
HapII CCGG 2 cut(s) 1310, 1316
HgaI GACGC 1 cut(s) 1998
Hin1I GRCGYC 1 cut(s) 2009
Hin1II CATG 6 cut(s) 593, 806, 815, 1414, 1426, 1551
HincII GTYRAC 1 cut(s) 976
HindII GTYRAC 1 cut(s) 976
HindIII AAGCTT 1 cut(s) 2187
HinfI GANTC 4 cut(s) 367, 384, 1325, 1967
HpaII CCGG 2 cut(s) 1310, 1316
HphI GGTGA 6 cut(s) 88, 118, 362, 1257, 1678, 1924
Hpy166II GTNNAC 8 cut(s) 27, 413, 447, 539, 604, 855, 976, 1405
Hpy188I TCNGA 6 cut(s) 15, 549, 950, 1147, 1466, 2122
Hpy8I GTNNAC 8 cut(s) 27, 413, 447, 539, 604, 855, 976, 1405
Hpy99I CGWCG 2 cut(s) 311, 1726
HpyAV CCTTC 4 cut(s) 614, 1903, 2060, 2162
HpyCH4III ACNGT 4 cut(s) 722, 954, 1080, 1860
HpyCH4IV ACGT 1 cut(s) 263
HpyF3I CTNAG 7 cut(s) 14, 542, 653, 666, 847, 1144, 1727
HpySE526I ACGT 1 cut(s) 263
Hsp92I GRCGYC 1 cut(s) 2009
Hsp92II CATG 6 cut(s) 593, 806, 815, 1414, 1426, 1551
Kzo9I GATC 4 cut(s) 423, 637, 658, 1207
LmnI GCTCC 5 cut(s) 523, 1006, 1318, 2052, 2177
Lsp1109I GCAGC 8 cut(s) 66, 69, 262, 469, 632, 802, 912, 1829
LweI GCATC 2 cut(s) 421, 1810
MabI ACCWGGT 1 cut(s) 1740
MaeI CTAG 6 cut(s) 326, 1443, 1521, 1760, 2127, 2163
MaeII ACGT 1 cut(s) 263
MaeIII GTNAC 7 cut(s) 464, 735, 796, 1438, 1598, 1860, 2147
MalI GATC 4 cut(s) 425, 639, 660, 1209
MboI GATC 4 cut(s) 423, 637, 658, 1207
MboII GAAGA 7 cut(s) 226, 773, 1043, 1198, 1204, 1438, 1682
MfeI CAATTG 3 cut(s) 995, 1874, 2003
MflI RGATCY 2 cut(s) 423, 1207
MhlI GDGCHC 5 cut(s) 541, 857, 1555, 1686, 2182
MlsI TGGCCA 1 cut(s) 1587
MluCI AATT 9 cut(s) 31, 94, 169, 688, 995, 1620, 1874, 2003, 2108
MluNI TGGCCA 1 cut(s) 1587
MlyI GAGTC 2 cut(s) 393, 1976
MmeI TCCRAC 3 cut(s) 572, 1855, 1974
Mox20I TGGCCA 1 cut(s) 1587
MscI TGGCCA 1 cut(s) 1587
MseI TTAA 6 cut(s) 173, 693, 714, 741, 1500, 2184
MslI CAYNNNNRTG 2 cut(s) 47, 1243
Msp20I TGGCCA 1 cut(s) 1587
MspA1I CMGCKG 2 cut(s) 60, 253
MspI CCGG 2 cut(s) 1310, 1316
MspR9I CCNGG 2 cut(s) 348, 1742
MunI CAATTG 3 cut(s) 995, 1874, 2003
Mva1269I GAATGC 1 cut(s) 1844
MvaI CCWGG 2 cut(s) 348, 1742
NcoI CCATGG 1 cut(s) 1547
NdeII GATC 4 cut(s) 423, 637, 658, 1207
NlaIII CATG 6 cut(s) 593, 806, 815, 1414, 1426, 1551
NlaIV GGNNCC 5 cut(s) 1002, 1222, 1314, 1320, 1926
NmeAIII GCCGAG 1 cut(s) 1826
NmuCI GTSAC 4 cut(s) 464, 735, 1598, 2147
NspI RCATGY 1 cut(s) 815
OliI CACNNNNGTG 2 cut(s) 47, 1243
PaeI GCATGC 1 cut(s) 815
PaqCI CACCTGC 2 cut(s) 94, 586
PceI AGGCCT 1 cut(s) 579
PcsI WCGNNNNNNNCGW 1 cut(s) 140
PctI GAATGC 1 cut(s) 1844
PfeI GAWTC 2 cut(s) 367, 1325
PleI GAGTC 2 cut(s) 392, 1975
PpsI GAGTC 2 cut(s) 392, 1975
Psp124BI GAGCTC 1 cut(s) 2182
Psp6I CCWGG 2 cut(s) 346, 1740
PspGI CCWGG 2 cut(s) 346, 1740
PspN4I GGNNCC 5 cut(s) 1002, 1222, 1314, 1320, 1926
PstI CTGCAG 2 cut(s) 105, 1075
PsuI RGATCY 2 cut(s) 423, 1207
RsaI GTAC 2 cut(s) 1406, 2170
RsaNI GTAC 2 cut(s) 1405, 2169
RseI CAYNNNNRTG 2 cut(s) 47, 1243
SacI GAGCTC 1 cut(s) 2182
SaqAI TTAA 6 cut(s) 173, 693, 714, 741, 1500, 2184
Sau3AI GATC 4 cut(s) 423, 637, 658, 1207
SchI GAGTC 2 cut(s) 393, 1976
ScrFI CCNGG 2 cut(s) 348, 1742
SduI GDGCHC 5 cut(s) 541, 857, 1555, 1686, 2182
SexAI ACCWGGT 1 cut(s) 1740
SfaNI GCATC 2 cut(s) 421, 1810
SfcI CTRYAG 2 cut(s) 101, 1071
SmiMI CAYNNNNRTG 2 cut(s) 47, 1243
SmlI CTYRAG 2 cut(s) 1241, 2141
SmoI CTYRAG 2 cut(s) 1241, 2141
SpeI ACTAGT 1 cut(s) 2162
SphI GCATGC 1 cut(s) 815
Sse9I AATT 9 cut(s) 31, 94, 169, 688, 995, 1620, 1874, 2003, 2108
SseBI AGGCCT 1 cut(s) 579
SspMI CTAG 6 cut(s) 326, 1443, 1521, 1760, 2127, 2163
SstI GAGCTC 1 cut(s) 2182
StuI AGGCCT 1 cut(s) 579
StyD4I CCNGG 2 cut(s) 346, 1740
StyI CCWWGG 5 cut(s) 1547, 1920, 2080, 2126, 2172
TaaI ACNGT 4 cut(s) 722, 954, 1080, 1860
TaiI ACGT 1 cut(s) 266
TaqI TCGA 3 cut(s) 243, 387, 661
TaqII GACCGA 1 cut(s) 174
TasI AATT 9 cut(s) 31, 94, 169, 688, 995, 1620, 1874, 2003, 2108
TatI WGTACW 1 cut(s) 1404
TauI GCSGC 5 cut(s) 315, 488, 569, 586, 1497
TfiI GAWTC 2 cut(s) 367, 1325
Tru1I TTAA 6 cut(s) 173, 693, 714, 741, 1500, 2184
Tru9I TTAA 6 cut(s) 173, 693, 714, 741, 1500, 2184
TscAI CASTG 1 cut(s) 2072
TseFI GTSAC 4 cut(s) 464, 735, 1598, 2147
TseI GCWGC 8 cut(s) 54, 57, 250, 482, 645, 815, 925, 1842
Tsp45I GTSAC 4 cut(s) 464, 735, 1598, 2147
TspDTI ATGAA 6 cut(s) 161, 336, 1335, 1439, 1676, 1770
TspGWI ACGGA 1 cut(s) 360
TspRI CASTG 1 cut(s) 2072
VneI GTGCAC 2 cut(s) 537, 853
XapI RAATTY 2 cut(s) 94, 169
XceI RCATGY 1 cut(s) 815
XmaJI CCTAGG 1 cut(s) 2126
XspI CTAG 6 cut(s) 326, 1443, 1521, 1760, 2127, 2163
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.