RchiOBHm_Chr1g0335991

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000063
Physical Location & Seq
Reverse (-)
27720085 .. 27721602
1518 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ56402

Sequence Viewer

Length: 903 bp
ATGTCAAGAAACTACTTCTCGTCATGGAGAGATGGGTTCACACGAACTTCTCAGTGTTCGGCCGTTGGTAACTACTATGAAGAGCAATTTGGCAAGTTTGAGAGGTCCGGCCTAAAGCCTCGTTGTCCTGATCATAGAGCCACCCCACACTTCCAAGCTTGGTGGTCGACTTTTATCATGAAAAATCTTGGAAAGGACTTGGCTGGGACCCAACGTGCTGCTTTACAAGGACTTCCGAACTTGCCAGGGCCCAAGGAAGGTAATGGTAAGAAGAAAGCACCGGATGGCAAGTTAAAATCAACCAAAGGATCCTCTAAACAAGGACAAACATCGAAGAAACGTGGCTCAACATTGGGGTATACTTGGAACGCCAAGAAAACAAAGAAATCATCGGATGTGTTGGAGAATTCGGTCACAAACCCGACGGACACTATGGTTAGTGAGGACATATTTTTCGAGGCTAATATGGATGATGGCCATGATGCTTTGGCTGAAAACCAAAATACGTCTGAAATTGAGGATATGGCCGAAACTGGTGACGCCTCGATCCATAGCGCGGACTCGGCTGATAGCGAAGGTTATTCGGAAGAAGCTCAATCAGAAAGCGGCGACCAAGAGAGAGATGGCCGCATTGATCATTCTTTGCCCCCACTTGAAAACTCCATGATTGAGATTGACATGGACAACTTGGGTGAGAGCCAACTTCACAACACGTCGAGCATCGGCCAACAGCTTGCCATATCAAACAACTTTTCCAAGGATGTTGAAAACACAGATGCACGTGGCCGAGAAACACTACTTATCCATCAGACATTGGTTCAGGTGGGAGAATCTCGAAGCAGCACAACCCTAGAATTGGCTCTTCTCAACCCCTATGTTCGGAACACTTACCTCTCCTCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

300

Amino Acids

33.09

Weight (kDa)

5.19

Isoelectric Point (pI)

35.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000063)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21382 FvH4_1g29794 FvH4_1g29795 FvH4_2g35573 FvH4_2g35574 FvH4_4g18552 FvH4_5g16044
malus_domestica MD05G1017000.v1.1
prunus_persica Prupe.3G140800_v2.0.a1 Prupe.6G164100_v2.0.a1
pyrus_communis pycom01g04330 pycom03g19820 pycom04g06720 pycom06g11360 pycom06g19000 pycom10g08100 pycom13g16660 pycom13g27590 pycom13g27640 pycom13g27890 pycom16g11770 pycom16g19530
rosa_chinensis RchiOBHm_Chr1g0317341 RchiOBHm_Chr1g0317351 RchiOBHm_Chr1g0320431 RchiOBHm_Chr1g0320711 RchiOBHm_Chr1g0320721 RchiOBHm_Chr1g0321611 RchiOBHm_Chr1g0321621 RchiOBHm_Chr1g0321631 RchiOBHm_Chr1g0323651 RchiOBHm_Chr1g0332991 RchiOBHm_Chr1g0333001 RchiOBHm_Chr1g0335981 RchiOBHm_Chr1g0335991 RchiOBHm_Chr1g0336001 RchiOBHm_Chr1g0350201 RchiOBHm_Chr1g0368201 RchiOBHm_Chr2g0105531 RchiOBHm_Chr2g0105541 RchiOBHm_Chr2g0116571 RchiOBHm_Chr2g0116581 RchiOBHm_Chr2g0121071 RchiOBHm_Chr2g0131351 RchiOBHm_Chr2g0131661 RchiOBHm_Chr2g0133021 RchiOBHm_Chr2g0138181 RchiOBHm_Chr2g0138191 RchiOBHm_Chr2g0142701 RchiOBHm_Chr2g0142711 RchiOBHm_Chr2g0152981 RchiOBHm_Chr3g0456181 RchiOBHm_Chr3g0456191 RchiOBHm_Chr3g0493631 RchiOBHm_Chr3g0496201 RchiOBHm_Chr4g0401541 RchiOBHm_Chr4g0410311 RchiOBHm_Chr4g0410321 RchiOBHm_Chr4g0419231 RchiOBHm_Chr4g0419511 RchiOBHm_Chr4g0419521 RchiOBHm_Chr5g0004311 RchiOBHm_Chr5g0004321 RchiOBHm_Chr5g0038131 RchiOBHm_Chr5g0038251 RchiOBHm_Chr5g0038261 RchiOBHm_Chr5g0038271 RchiOBHm_Chr5g0052241 RchiOBHm_Chr5g0053911 RchiOBHm_Chr5g0074641 RchiOBHm_Chr5g0076651 RchiOBHm_Chr5g0076661 RchiOBHm_Chr6g0249161 RchiOBHm_Chr6g0249171 RchiOBHm_Chr6g0250961 RchiOBHm_Chr6g0253701 RchiOBHm_Chr6g0262131 RchiOBHm_Chr6g0263181 RchiOBHm_Chr6g0263231 RchiOBHm_Chr6g0263241 RchiOBHm_Chr6g0263251 RchiOBHm_Chr6g0291271 RchiOBHm_Chr7g0194611 RchiOBHm_Chr7g0219691 RchiOBHm_Chr7g0219701 RchiOBHm_Chr7g0225431 RchiOBHm_Chr7g0234221 RchiOBHm_Chr7g0238711 RchiOBHm_Chr7g0238721 RchiOBHm_Chr7g0238731 RchiOBHm_Chr7g0239611 RchiOBHm_Chr7g0239621
rosa_laevigata RLG00000001361 RLG00000001376 RLG00000001860 RLG00000002051 RLG00000002362 RLG00000008940 RLG00000012764 RLG00000018782 RLG00000029639 RLG00000030151
rosa_multiflora Rmu_co8090794.1_g000001 Rmu_co8135356.1_g000001 Rmu_co8224968.1_g000001 Rmu_sc0000016.1_g000020 Rmu_sc0000029.1_g000061 Rmu_sc0000035.1_g000032 Rmu_sc0000060.1_g000041 Rmu_sc0000148.1_g000041 Rmu_sc0000315.1_g000084 Rmu_sc0000527.1_g000005 Rmu_sc0000527.1_g000007 Rmu_sc0000527.1_g000008 Rmu_sc0000648.1_g000002 Rmu_sc0000762.1_g000076 Rmu_sc0000870.1_g000003 Rmu_sc0000870.1_g000004 Rmu_sc0000948.1_g000037 Rmu_sc0000997.1_g000003 Rmu_sc0001047.1_g000041 Rmu_sc0001047.1_g000042 Rmu_sc0001075.1_g000044 Rmu_sc0001174.1_g000006 Rmu_sc0001235.1_g000025 Rmu_sc0001292.1_g000008 Rmu_sc0001301.1_g000038 Rmu_sc0001461.1_g000069 Rmu_sc0001461.1_g000070 Rmu_sc0001669.1_g000041 Rmu_sc0001689.1_g000027 Rmu_sc0001896.1_g000008 Rmu_sc0001909.1_g000013 Rmu_sc0002170.1_g000038 Rmu_sc0002200.1_g000014 Rmu_sc0002283.1_g000027 Rmu_sc0002284.1_g000014 Rmu_sc0002294.1_g000017 Rmu_sc0002294.1_g000018 Rmu_sc0002307.1_g000020 Rmu_sc0002307.1_g000021 Rmu_sc0002307.1_g000023 Rmu_sc0002357.1_g000054 Rmu_sc0002409.1_g000005 Rmu_sc0002535.1_g000002 Rmu_sc0002589.1_g000014 Rmu_sc0002759.1_g000016 Rmu_sc0002759.1_g000017 Rmu_sc0002777.1_g000015 Rmu_sc0002824.1_g000016 Rmu_sc0002872.1_g000005 Rmu_sc0002872.1_g000012 Rmu_sc0002872.1_g000013 Rmu_sc0002942.1_g000019 Rmu_sc0003337.1_g000001 Rmu_sc0003410.1_g000052 Rmu_sc0003445.1_g000010 Rmu_sc0003773.1_g000007 Rmu_sc0003773.1_g000008 Rmu_sc0003895.1_g000002 Rmu_sc0004063.1_g000006 Rmu_sc0004088.1_g000009 Rmu_sc0004088.1_g000010 Rmu_sc0004174.1_g000027 Rmu_sc0004196.1_g000010 Rmu_sc0004515.1_g000006 Rmu_sc0004727.1_g000010 Rmu_sc0004755.1_g000018 Rmu_sc0005016.1_g000030 Rmu_sc0005026.1_g000001 Rmu_sc0005044.1_g000007 Rmu_sc0005284.1_g000001 Rmu_sc0005431.1_g000030 Rmu_sc0005802.1_g000014 Rmu_sc0005802.1_g000015 Rmu_sc0005994.1_g000004 Rmu_sc0005994.1_g000005 Rmu_sc0006059.1_g000048 Rmu_sc0006583.1_g000013 Rmu_sc0006824.1_g000009 Rmu_sc0007458.1_g000005 Rmu_sc0007707.1_g000002 Rmu_sc0008242.1_g000012 Rmu_sc0008713.1_g000006 Rmu_sc0008770.1_g000008 Rmu_sc0009785.1_g000004 Rmu_sc0009785.1_g000005 Rmu_sc0010125.1_g000001 Rmu_sc0010211.1_g000004 Rmu_sc0011034.1_g000001 Rmu_sc0011833.1_g000006 Rmu_sc0014851.1_g000001 Rmu_sc0014899.1_g000001 Rmu_sc0015060.1_g000003 Rmu_sc0015186.1_g000001 Rmu_sc0015248.1_g000003 Rmu_sc0015248.1_g000004 Rmu_sc0015314.1_g000001 Rmu_sc0018098.1_g000002 Rmu_sc0022706.1_g000004 Rmu_sc0023350.1_g000002 Rmu_sc0027636.1_g000001 Rmu_sc0027672.1_g000003 Rmu_sc0030879.1_g000001 Rmu_ssc0000008.1_g000029 Rmu_ssc0000019.1_g000014 Rmu_ssc0000050.1_g000082 Rmu_ssc0000282.1_g000004 Rmu_ssc0000311.1_g000010
rosa_roxburghii Rroxscaffold_1G00015190 Rroxscaffold_1G00031880 Rroxscaffold_1G00031890 Rroxscaffold_1G00059310 Rroxscaffold_1G00060420 Rroxscaffold_1G00067930 Rroxscaffold_1G00075030 Rroxscaffold_2G00082210 Rroxscaffold_2G00122970 Rroxscaffold_3G00218230 Rroxscaffold_3G00219020 Rroxscaffold_3G00219030 Rroxscaffold_3G00223680 Rroxscaffold_3G00223690 Rroxscaffold_3G00223700 Rroxscaffold_3G00226870 Rroxscaffold_3G00226880 Rroxscaffold_3G00232990 Rroxscaffold_3G00265610 Rroxscaffold_3G00265620 Rroxscaffold_3G00265630 Rroxscaffold_4G00318660 Rroxscaffold_4G00319060 Rroxscaffold_4G00323500 Rroxscaffold_5G00357520 Rroxscaffold_5G00366150 Rroxscaffold_5G00377470 Rroxscaffold_6G00395700 Rroxscaffold_6G00413950 Rroxscaffold_7G00187650 Rroxscaffold_7G00198290 Rroxscaffold_7G00198300 Rroxscaffold_7G00208060
rosa_rugosa Rorug01G0173900 Rorug01G0174000 Rorug01G0174100 Rorug01G0174100 Rorug02G0341200 Rorug04G0135700 Rorug04G0135800 Rorug05G0032500 Rorug06G0021800
rosa_samantha Rh1AG036600 Rh1AG245800 Rh1CG021700 Rh1CG021800 Rh1CG085800 Rh1CG085900 Rh1CG187900 Rh1CG229600 Rh1CG239600 Rh1CG246500 Rh1CG246600 Rh2BG478100 Rh2DG341300 Rh2DG366600 Rh2DG375700 Rh2DG384300 Rh2DG487000 Rh2DG504000 Rh2DG504100 Rh3AG311800 Rh3AG327500 Rh3AG328300 Rh3BG345100 Rh3CG320100 Rh4AG005700 Rh4AG067900 Rh4AG068000 Rh4AG084400 Rh4AG106700 Rh4AG160000 Rh4AG173900 Rh4AG174000 Rh4CG125300 Rh4CG125500 Rh4CG264500 Rh4DG110800 Rh5AG047300 Rh5AG085200 Rh5AG126300 Rh5AG127300 Rh5AG203000 Rh5AG332400 Rh5AG332500 Rh5AG342400 Rh5AG344100 Rh5AG375600 Rh5AG378300 Rh5AG386000 Rh5AG529600 Rh5BG125200 Rh5CG137600 Rh5CG137700 Rh5DG125200 Rh6BG134100 Rh6BG175400 Rh6BG179500 Rh6BG179600 Rh6BG181600 Rh6BG181700 Rh6BG191100 Rh6BG232900 Rh6BG259700 Rh6BG259800 Rh7AG028000 Rh7AG319400 Rh7AG352700 Rh7AG352800 Rh7AG352900 Rh7AG482500 Rh7AG482600 Rh7AG503800 Rh7BG334700 Rh7CG200100 Rh7CG336200 Rh7CG370200 Rh7CG370400 Rh7CG370500
rosa_wichuraiana Rw1G001580 Rw1G003570 Rw1G004260 Rw1G004270 Rw1G021170 Rw2G019390 Rw2G040280 Rw2G044050 Rw4G004430 Rw5G010950 Rw5G018350 Rw5G032890 Rw6G002840 Rw6G006510 Rw6G007780 Rw6G033790 Rw7G036320 Rw7G040550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 167, 359
AccII CGCG 1 cut(s) 557
AciI CCGC 3 cut(s) 557, 606, 628
AclWI GGATC 3 cut(s) 303, 316, 541
AcoI YGGCCR 6 cut(s) 60, 475, 525, 625, 724, 784
AcsI RAATTY 1 cut(s) 406
AcvI CACGTG 1 cut(s) 782
AcyI GRCGYC 1 cut(s) 540
AfiI CCNNNNNNNGG 4 cut(s) 257, 556, 856, 879
AflIII ACRYGT 1 cut(s) 711
AgsI TTSAA 2 cut(s) 656, 767
AjiI CACGTC 1 cut(s) 714
AjnI CCWGG 1 cut(s) 244
AjuI GAANNNNNNNTTGG 2 cut(s) 72, 104
AluBI AGCT 3 cut(s) 158, 593, 733
AluI AGCT 3 cut(s) 158, 593, 733
AlwI GGATC 3 cut(s) 303, 316, 541
AoxI GGCC 8 cut(s) 60, 109, 248, 475, 525, 625, 724, 784
ApaI GGGCCC 1 cut(s) 252
ApeKI GCWGC 2 cut(s) 218, 840
ApoI RAATTY 1 cut(s) 406
ArsI GACNNNNNNTTYG 2 cut(s) 437, 469
AspLEI GCGC 1 cut(s) 557
AspS9I GGNCC 4 cut(s) 105, 207, 248, 249
AsuHPI GGTGA 2 cut(s) 548, 704
AvaII GGWCC 2 cut(s) 105, 207
BaeGI GKGCMC 1 cut(s) 252
BalI TGGCCA 1 cut(s) 477
BamHI GGATCC 1 cut(s) 308
BanII GRGCYC 1 cut(s) 252
BbrPI CACGTG 1 cut(s) 782
BbvI GCAGC 2 cut(s) 205, 852
BccI CCATC 5 cut(s) 26, 278, 467, 617, 813
BceAI ACGGC 1 cut(s) 47
BciT130I CCWGG 1 cut(s) 246
BclI TGATCA 2 cut(s) 130, 634
BfaI CTAG 1 cut(s) 851
BisI GCNGC 4 cut(s) 219, 607, 628, 841
BlsI GCNGC 4 cut(s) 220, 608, 629, 842
Bme1390I CCNGG 1 cut(s) 246
Bme18I GGWCC 2 cut(s) 105, 207
BmgBI CACGTC 1 cut(s) 714
BmgT120I GGNCC 4 cut(s) 105, 207, 248, 249
BmiI GGNNCC 4 cut(s) 208, 209, 250, 310
BmrFI CCNGG 1 cut(s) 246
BmsI GCATC 3 cut(s) 472, 729, 766
BsaAI YACGTR 1 cut(s) 782
BsaHI GRCGYC 1 cut(s) 540
BsaJI CCNNGG 3 cut(s) 245, 252, 756
BsaWI WCCGGW 1 cut(s) 280
BsaXI ACNNNNNCTCC 1 cut(s) 881
Bsc4I CCNNNNNNNGG 4 cut(s) 257, 556, 856, 879
Bse1I ACTGG 1 cut(s) 538
BseBI CCWGG 1 cut(s) 246
BseDI CCNNGG 3 cut(s) 245, 252, 756
BseGI GGATG 4 cut(s) 289, 400, 475, 766
BseLI CCNNNNNNNGG 4 cut(s) 257, 556, 856, 879
BseMII CTCAG 1 cut(s) 65
BseNI ACTGG 1 cut(s) 538
BseRI GAGGAG 1 cut(s) 886
BseSI GKGCMC 1 cut(s) 252
BseX3I CGGCCG 1 cut(s) 60
BseXI GCAGC 2 cut(s) 205, 852
BseYI CCCAGC 1 cut(s) 203
Bsh1236I CGCG 1 cut(s) 557
Bsh1285I CGRYCG 1 cut(s) 63
BshFI GGCC 8 cut(s) 62, 111, 250, 477, 527, 627, 726, 786
BsiEI CGRYCG 1 cut(s) 63
BsiSI CCGG 2 cut(s) 108, 281
BslFI GGGAC 1 cut(s) 220
BslI CCNNNNNNNGG 4 cut(s) 257, 556, 856, 879
BsmFI GGGAC 1 cut(s) 220
BsnI GGCC 8 cut(s) 62, 111, 250, 477, 527, 627, 726, 786
Bsp120I GGGCCC 1 cut(s) 248
Bsp1286I GDGCHC 1 cut(s) 252
Bsp143I GATC 4 cut(s) 130, 308, 546, 634
BspACI CCGC 3 cut(s) 557, 606, 628
BspANI GGCC 8 cut(s) 62, 111, 250, 477, 527, 627, 726, 786
BspCNI CTCAG 1 cut(s) 64
BspFNI CGCG 1 cut(s) 557
BspHI TCATGA 1 cut(s) 177
BspLI GGNNCC 4 cut(s) 208, 209, 250, 310
BspPI GGATC 3 cut(s) 303, 316, 541
BspQI GCTCTTC 2 cut(s) 75, 867
BsrI ACTGG 1 cut(s) 538
BssECI CCNNGG 3 cut(s) 245, 252, 756
BssMI GATC 4 cut(s) 130, 308, 546, 634
BssNAI GTATAC 1 cut(s) 360
BssNI GRCGYC 1 cut(s) 540
BssT1I CCWWGG 2 cut(s) 252, 756
Bst1107I GTATAC 1 cut(s) 360
Bst2UI CCWGG 1 cut(s) 246
Bst6I CTCTTC 2 cut(s) 75, 867
BstACI GRCGYC 1 cut(s) 540
BstBAI YACGTR 1 cut(s) 782
BstC8I GCNNGC 1 cut(s) 735
BstDEI CTNAG 1 cut(s) 51
BstF5I GGATG 4 cut(s) 289, 400, 475, 766
BstFNI CGCG 1 cut(s) 557
BstHHI GCGC 1 cut(s) 557
BstKTI GATC 4 cut(s) 133, 311, 549, 637
BstMBI GATC 4 cut(s) 130, 308, 546, 634
BstMCI CGRYCG 1 cut(s) 63
BstMWI GCNNNNNNNGC 1 cut(s) 563
BstNI CCWGG 1 cut(s) 246
BstSCI CCNGG 1 cut(s) 244
BstSLI GKGCMC 1 cut(s) 252
BstUI CGCG 1 cut(s) 557
BstV1I GCAGC 2 cut(s) 205, 852
BstX2I RGATCY 1 cut(s) 308
BstYI RGATCY 1 cut(s) 308
BstZ17I GTATAC 1 cut(s) 360
BstZI CGGCCG 1 cut(s) 60
BsuRI GGCC 8 cut(s) 62, 111, 250, 477, 527, 627, 726, 786
BtrI CACGTC 1 cut(s) 714
BtsCI GGATG 4 cut(s) 289, 400, 475, 766
BtsIMutI CAGTG 1 cut(s) 59
Cac8I GCNNGC 1 cut(s) 735
CciI TCATGA 1 cut(s) 177
CfoI GCGC 1 cut(s) 557
Cfr13I GGNCC 4 cut(s) 105, 207, 248, 249
CseI GACGC 1 cut(s) 548
CspCI CAANNNNNGTGG 2 cut(s) 143, 178
CviAII CATG 5 cut(s) 24, 178, 479, 664, 679
DdeI CTNAG 1 cut(s) 51
DpnI GATC 4 cut(s) 132, 310, 548, 636
DpnII GATC 4 cut(s) 130, 308, 546, 634
EaeI YGGCCR 6 cut(s) 60, 475, 525, 625, 724, 784
EagI CGGCCG 1 cut(s) 60
Eam1104I CTCTTC 2 cut(s) 75, 867
EarI CTCTTC 2 cut(s) 75, 867
EclXI CGGCCG 1 cut(s) 60
Eco130I CCWWGG 2 cut(s) 252, 756
Eco24I GRGCYC 1 cut(s) 252
Eco47I GGWCC 2 cut(s) 105, 207
Eco52I CGGCCG 1 cut(s) 60
Eco72I CACGTG 1 cut(s) 782
EcoO109I RGGNCCY 2 cut(s) 207, 248
EcoRI GAATTC 1 cut(s) 406
EcoRII CCWGG 1 cut(s) 244
EcoT14I CCWWGG 2 cut(s) 252, 756
EcoT38I GRGCYC 1 cut(s) 252
ErhI CCWWGG 2 cut(s) 252, 756
FaeI CATG 5 cut(s) 27, 181, 482, 667, 682
FaqI GGGAC 1 cut(s) 220
FatI CATG 5 cut(s) 23, 177, 478, 663, 678
FbaI TGATCA 2 cut(s) 130, 634
FblI GTMKAC 2 cut(s) 167, 359
Fnu4HI GCNGC 4 cut(s) 219, 607, 628, 841
FokI GGATG 4 cut(s) 296, 407, 482, 773
FriOI GRGCYC 1 cut(s) 252
Fsp4HI GCNGC 4 cut(s) 219, 607, 628, 841
FspBI CTAG 1 cut(s) 851
GlaI GCGC 1 cut(s) 556
GluI GCNGC 4 cut(s) 219, 607, 628, 841
GsaI CCCAGC 1 cut(s) 207
HaeIII GGCC 8 cut(s) 62, 111, 250, 477, 527, 627, 726, 786
HapII CCGG 2 cut(s) 108, 281
HgaI GACGC 1 cut(s) 548
HhaI GCGC 1 cut(s) 557
Hin1I GRCGYC 1 cut(s) 540
Hin1II CATG 5 cut(s) 27, 181, 482, 667, 682
Hin6I GCGC 1 cut(s) 555
HinP1I GCGC 1 cut(s) 555
HincII GTYRAC 1 cut(s) 168
HindII GTYRAC 1 cut(s) 168
HindIII AAGCTT 1 cut(s) 156
HinfI GANTC 2 cut(s) 560, 830
HpaII CCGG 2 cut(s) 108, 281
HphI GGTGA 2 cut(s) 548, 704
Hpy166II GTNNAC 3 cut(s) 39, 168, 360
Hpy188I TCNGA 7 cut(s) 237, 394, 511, 586, 601, 810, 882
Hpy188III TCNNGA 4 cut(s) 6, 128, 178, 834
Hpy8I GTNNAC 3 cut(s) 39, 168, 360
Hpy99I CGWCG 2 cut(s) 427, 718
HpyAV CCTTC 2 cut(s) 251, 569
HpyCH4IV ACGT 5 cut(s) 214, 340, 506, 713, 781
HpyCH4V TGCA 1 cut(s) 779
HpyF10VI GCNNNNNNNGC 1 cut(s) 563
HpyF3I CTNAG 1 cut(s) 51
HpySE526I ACGT 5 cut(s) 214, 340, 506, 713, 781
Hsp92I GRCGYC 1 cut(s) 540
Hsp92II CATG 5 cut(s) 27, 181, 482, 667, 682
HspAI GCGC 1 cut(s) 555
KflI GGGWCCC 1 cut(s) 207
Ksp22I TGATCA 2 cut(s) 130, 634
Kzo9I GATC 4 cut(s) 130, 308, 546, 634
LguI GCTCTTC 2 cut(s) 75, 867
LpnPI CCDG 8 cut(s) 121, 141, 189, 231, 258, 294, 519, 806
Lsp1109I GCAGC 2 cut(s) 205, 852
LweI GCATC 3 cut(s) 472, 729, 766
MaeI CTAG 1 cut(s) 851
MaeII ACGT 5 cut(s) 214, 340, 506, 713, 781
MaeIII GTNAC 3 cut(s) 68, 412, 536
MalI GATC 4 cut(s) 132, 310, 548, 636
MboI GATC 4 cut(s) 130, 308, 546, 634
MboII GAAGA 5 cut(s) 92, 283, 346, 599, 854
MflI RGATCY 1 cut(s) 308
MhlI GDGCHC 1 cut(s) 252
MlsI TGGCCA 1 cut(s) 477
MluCI AATT 4 cut(s) 86, 406, 513, 854
MluNI TGGCCA 1 cut(s) 477
MlyI GAGTC 1 cut(s) 554
MmeI TCCRAC 1 cut(s) 381
MnlI CCTC 8 cut(s) 96, 129, 322, 436, 451, 511, 553, 902
Mox20I TGGCCA 1 cut(s) 477
MscI TGGCCA 1 cut(s) 477
MseI TTAA 1 cut(s) 293
Msp20I TGGCCA 1 cut(s) 477
MspI CCGG 2 cut(s) 108, 281
MspR9I CCNGG 1 cut(s) 246
MvaI CCWGG 1 cut(s) 246
MvnI CGCG 1 cut(s) 557
MwoI GCNNNNNNNGC 1 cut(s) 563
NdeII GATC 4 cut(s) 130, 308, 546, 634
NlaIII CATG 5 cut(s) 27, 181, 482, 667, 682
NlaIV GGNNCC 4 cut(s) 208, 209, 250, 310
NmeAIII GCCGAG 2 cut(s) 542, 812
NmuCI GTSAC 2 cut(s) 412, 536
PagI TCATGA 1 cut(s) 177
PciSI GCTCTTC 2 cut(s) 75, 867
PfeI GAWTC 1 cut(s) 830
PkrI GCNGC 4 cut(s) 220, 608, 629, 842
PleI GAGTC 1 cut(s) 554
PmaCI CACGTG 1 cut(s) 782
PmlI CACGTG 1 cut(s) 782
PpsI GAGTC 1 cut(s) 554
Ppu21I YACGTR 1 cut(s) 782
PpuMI RGGWCCY 1 cut(s) 207
Psp5II RGGWCCY 1 cut(s) 207
Psp6I CCWGG 1 cut(s) 244
PspCI CACGTG 1 cut(s) 782
PspFI CCCAGC 1 cut(s) 203
PspGI CCWGG 1 cut(s) 244
PspN4I GGNNCC 4 cut(s) 208, 209, 250, 310
PspOMI GGGCCC 1 cut(s) 248
PspPI GGNCC 4 cut(s) 105, 207, 248, 249
PspPPI RGGWCCY 1 cut(s) 207
PsuI RGATCY 1 cut(s) 308
SalI GTCGAC 1 cut(s) 166
SapI GCTCTTC 2 cut(s) 75, 867
SaqAI TTAA 1 cut(s) 293
SatI GCNGC 4 cut(s) 219, 607, 628, 841
Sau3AI GATC 4 cut(s) 130, 308, 546, 634
Sau96I GGNCC 4 cut(s) 105, 207, 248, 249
SchI GAGTC 1 cut(s) 554
ScrFI CCNGG 1 cut(s) 246
SduI GDGCHC 1 cut(s) 252
SfaNI GCATC 3 cut(s) 472, 729, 766
SinI GGWCC 2 cut(s) 105, 207
Sse9I AATT 4 cut(s) 86, 406, 513, 854
SsiI CCGC 3 cut(s) 557, 606, 628
SspMI CTAG 1 cut(s) 851
StyD4I CCNGG 1 cut(s) 244
StyI CCWWGG 2 cut(s) 252, 756
TaiI ACGT 5 cut(s) 217, 343, 509, 716, 784
TaqI TCGA 6 cut(s) 167, 332, 456, 545, 716, 835
TaqII GACCGA 1 cut(s) 400
TasI AATT 4 cut(s) 86, 406, 513, 854
TauI GCSGC 2 cut(s) 609, 630
TfiI GAWTC 1 cut(s) 830
Tru1I TTAA 1 cut(s) 293
Tru9I TTAA 1 cut(s) 293
TscAI CASTG 1 cut(s) 59
TseFI GTSAC 2 cut(s) 412, 536
TseI GCWGC 2 cut(s) 218, 840
Tsp45I GTSAC 2 cut(s) 412, 536
TspDTI ATGAA 2 cut(s) 93, 194
TspGWI ACGGA 1 cut(s) 440
TspRI CASTG 1 cut(s) 59
VpaK11BI GGWCC 2 cut(s) 105, 207
XapI RAATTY 1 cut(s) 406
XcmI CCANNNNNNNNNTGG 1 cut(s) 620
XmiI GTMKAC 2 cut(s) 167, 359
XspI CTAG 1 cut(s) 851
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.