Plant mobile domain
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PMD | PF10536 | 118 - 442 | 5.7e-29 | Plant mobile domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 122 |
| AccB1I | GGYRCC | 2 cut(s) | 521, 1091 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 827 |
| AccBSI | CCGCTC | 1 cut(s) | 2486 |
| AccI | GTMKAC | 2 cut(s) | 1174, 1237 |
| AciI | CCGC | 7 cut(s) | 5, 24, 31, 375, 525, 1313, 2486 |
| AclI | AACGTT | 1 cut(s) | 986 |
| AclWI | GGATC | 4 cut(s) | 78, 1686, 1699, 2433 |
| AcoI | YGGCCR | 3 cut(s) | 272, 1723, 2236 |
| AcsI | RAATTY | 7 cut(s) | 231, 1196, 1245, 1333, 2368, 2493, 2588 |
| AcuI | CTGAAG | 5 cut(s) | 684, 1825, 1932, 1950, 2187 |
| AfaI | GTAC | 5 cut(s) | 80, 696, 791, 1299, 2523 |
| AfeI | AGCGCT | 1 cut(s) | 412 |
| AjiI | CACGTC | 1 cut(s) | 2200 |
| AjnI | CCWGG | 8 cut(s) | 290, 299, 377, 1188, 1370, 1399, 1519, 2238 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 422, 454 |
| Alw21I | GWGCWC | 2 cut(s) | 651, 1762 |
| Alw26I | GTCTC | 1 cut(s) | 726 |
| AlwI | GGATC | 4 cut(s) | 78, 1686, 1699, 2433 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1673 |
| Aor51HI | AGCGCT | 1 cut(s) | 412 |
| ApaI | GGGCCC | 1 cut(s) | 1464 |
| ApeKI | GCWGC | 6 cut(s) | 413, 494, 1310, 1985, 1988, 2471 |
| ApoI | RAATTY | 7 cut(s) | 231, 1196, 1245, 1333, 2368, 2493, 2588 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1061, 1214, 1361 |
| AspA2I | CCTAGG | 1 cut(s) | 889 |
| AspLEI | GCGC | 3 cut(s) | 384, 413, 2348 |
| AsuC2I | CCSGG | 3 cut(s) | 896, 1044, 1496 |
| AsuHPI | GGTGA | 7 cut(s) | 109, 236, 341, 779, 1360, 1568, 2215 |
| AsuII | TTCGAA | 2 cut(s) | 585, 1995 |
| AsuNHI | GCTAGC | 1 cut(s) | 778 |
| AvaII | GGWCC | 5 cut(s) | 134, 208, 1073, 2082, 2242 |
| AvrII | CCTAGG | 1 cut(s) | 889 |
| AxyI | CCTNAGG | 2 cut(s) | 763, 1052 |
| BaeGI | GKGCMC | 1 cut(s) | 1464 |
| BalI | TGGCCA | 2 cut(s) | 274, 2238 |
| BamHI | GGATCC | 1 cut(s) | 1691 |
| BanI | GGYRCC | 2 cut(s) | 521, 1091 |
| BanII | GRGCYC | 1 cut(s) | 1464 |
| BauI | CACGAG | 2 cut(s) | 969, 2215 |
| BbsI | GAAGAC | 3 cut(s) | 679, 1658, 1688 |
| Bbv12I | GWGCWC | 2 cut(s) | 651, 1762 |
| BbvCI | CCTCAGC | 3 cut(s) | 407, 837, 1859 |
| BbvI | GCAGC | 6 cut(s) | 400, 481, 1297, 1972, 1975, 2458 |
| BceAI | ACGGC | 2 cut(s) | 1710, 2086 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 75, 109, 1970, 2004, 2618, 2652 |
| BciT130I | CCWGG | 8 cut(s) | 292, 301, 379, 1190, 1372, 1401, 1521, 2240 |
| BciVI | GTATCC | 1 cut(s) | 1050 |
| BclI | TGATCA | 2 cut(s) | 331, 2173 |
| BcnI | CCSGG | 3 cut(s) | 896, 1044, 1496 |
| BcoDI | GTCTC | 1 cut(s) | 726 |
| BfaI | CTAG | 6 cut(s) | 779, 890, 1511, 1644, 2066, 2564 |
| BfmI | CTRYAG | 1 cut(s) | 676 |
| BfoI | RGCGCY | 2 cut(s) | 385, 414 |
| BfuI | GTATCC | 1 cut(s) | 1050 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 850 |
| BglII | AGATCT | 2 cut(s) | 1144, 1844 |
| BisI | GCNGC | 6 cut(s) | 414, 495, 1311, 1986, 1989, 2472 |
| BlnI | CCTAGG | 1 cut(s) | 889 |
| BlsI | GCNGC | 6 cut(s) | 415, 496, 1312, 1987, 1990, 2473 |
| Bme18I | GGWCC | 5 cut(s) | 134, 208, 1073, 2082, 2242 |
| BmgBI | CACGTC | 1 cut(s) | 2200 |
| BmiI | GGNNCC | 7 cut(s) | 523, 843, 1093, 1462, 1693, 2084, 2244 |
| BmrI | ACTGGG | 1 cut(s) | 1959 |
| BmsI | GCATC | 6 cut(s) | 303, 751, 1297, 1972, 2302, 2450 |
| BmtI | GCTAGC | 1 cut(s) | 782 |
| BmuI | ACTGGG | 1 cut(s) | 1959 |
| BpiI | GAAGAC | 3 cut(s) | 679, 1658, 1688 |
| Bpu10I | CCTNAGC | 4 cut(s) | 147, 407, 837, 1859 |
| Bpu14I | TTCGAA | 2 cut(s) | 585, 1995 |
| BpuEI | CTTGAG | 2 cut(s) | 1644, 2074 |
| BpuMI | CCSGG | 3 cut(s) | 896, 1044, 1496 |
| Bsa29I | ATCGAT | 1 cut(s) | 1438 |
| BsaAI | YACGTR | 1 cut(s) | 78 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1503 |
| BsaI | GGTCTC | 1 cut(s) | 726 |
| BsaJI | CCNNGG | 3 cut(s) | 300, 889, 1399 |
| BsaWI | WCCGGW | 1 cut(s) | 205 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1615, 1645 |
| Bse1I | ACTGG | 6 cut(s) | 341, 674, 1338, 1954, 2016, 2051 |
| Bse21I | CCTNAGG | 2 cut(s) | 763, 1052 |
| Bse3DI | GCAATG | 2 cut(s) | 498, 2080 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1503 |
| BseBI | CCWGG | 8 cut(s) | 292, 301, 379, 1190, 1372, 1401, 1521, 2240 |
| BseCI | ATCGAT | 1 cut(s) | 1438 |
| BseDI | CCNNGG | 3 cut(s) | 300, 889, 1399 |
| BseGI | GGATG | 3 cut(s) | 437, 1167, 1300 |
| BseJI | GATNNNNATC | 1 cut(s) | 1503 |
| BseMI | GCAATG | 2 cut(s) | 498, 2080 |
| BseMII | CTCAG | 4 cut(s) | 421, 557, 828, 1850 |
| BseNI | ACTGG | 6 cut(s) | 341, 674, 1338, 1954, 2016, 2051 |
| BseRI | GAGGAG | 4 cut(s) | 395, 653, 2555, 2704 |
| BseSI | GKGCMC | 1 cut(s) | 1464 |
| BseXI | GCAGC | 6 cut(s) | 400, 481, 1297, 1972, 1975, 2458 |
| BseYI | CCCAGC | 3 cut(s) | 503, 2026, 2245 |
| BsgI | GTGCAG | 1 cut(s) | 520 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2638 |
| BshNI | GGYRCC | 2 cut(s) | 521, 1091 |
| BshVI | ATCGAT | 1 cut(s) | 1438 |
| BsiEI | CGRYCG | 1 cut(s) | 2638 |
| BsiHKAI | GWGCWC | 2 cut(s) | 651, 1762 |
| BsiSI | CCGG | 4 cut(s) | 206, 896, 1044, 1495 |
| BslFI | GGGAC | 2 cut(s) | 935, 2228 |
| BsmAI | GTCTC | 1 cut(s) | 726 |
| BsmFI | GGGAC | 2 cut(s) | 935, 2228 |
| Bso31I | GGTCTC | 1 cut(s) | 726 |
| Bsp119I | TTCGAA | 2 cut(s) | 585, 1995 |
| Bsp120I | GGGCCC | 1 cut(s) | 1460 |
| Bsp1286I | GDGCHC | 3 cut(s) | 651, 1464, 1762 |
| Bsp1407I | TGTACA | 1 cut(s) | 789 |
| BspACI | CCGC | 7 cut(s) | 5, 24, 31, 375, 525, 1313, 2486 |
| BspCNI | CTCAG | 4 cut(s) | 420, 556, 829, 1851 |
| BspDI | ATCGAT | 1 cut(s) | 1438 |
| BspHI | TCATGA | 1 cut(s) | 2230 |
| BspLI | GGNNCC | 7 cut(s) | 523, 843, 1093, 1462, 1693, 2084, 2244 |
| BspOI | GCTAGC | 1 cut(s) | 782 |
| BspPI | GGATC | 4 cut(s) | 78, 1686, 1699, 2433 |
| BspQI | GCTCTTC | 1 cut(s) | 2541 |
| BspT104I | TTCGAA | 2 cut(s) | 585, 1995 |
| BspT107I | GGYRCC | 2 cut(s) | 521, 1091 |
| BspTNI | GGTCTC | 1 cut(s) | 726 |
| BsrBI | CCGCTC | 1 cut(s) | 2486 |
| BsrDI | GCAATG | 2 cut(s) | 498, 2080 |
| BsrGI | TGTACA | 1 cut(s) | 789 |
| BsrI | ACTGG | 6 cut(s) | 341, 674, 1338, 1954, 2016, 2051 |
| BssECI | CCNNGG | 3 cut(s) | 300, 889, 1399 |
| BssNAI | GTATAC | 1 cut(s) | 1238 |
| BssSI | CACGAG | 2 cut(s) | 969, 2215 |
| BssT1I | CCWWGG | 1 cut(s) | 889 |
| Bst1107I | GTATAC | 1 cut(s) | 1238 |
| Bst2BI | CACGAG | 2 cut(s) | 969, 2215 |
| Bst2UI | CCWGG | 8 cut(s) | 292, 301, 379, 1190, 1372, 1401, 1521, 2240 |
| Bst4CI | ACNGT | 9 cut(s) | 12, 83, 124, 215, 329, 789, 814, 1669, 1780 |
| Bst6I | CTCTTC | 2 cut(s) | 1554, 2541 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 911 |
| BstAUI | TGTACA | 1 cut(s) | 789 |
| BstBAI | YACGTR | 1 cut(s) | 78 |
| BstBI | TTCGAA | 2 cut(s) | 585, 1995 |
| BstC8I | GCNNGC | 2 cut(s) | 780, 2659 |
| BstDEI | CTNAG | 9 cut(s) | 147, 407, 543, 763, 837, 1052, 1096, 1859, 2255 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1288, 2258 |
| BstF5I | GGATG | 3 cut(s) | 437, 1167, 1300 |
| BstH2I | RGCGCY | 2 cut(s) | 385, 414 |
| BstHHI | GCGC | 3 cut(s) | 384, 413, 2348 |
| BstMAI | GTCTC | 1 cut(s) | 726 |
| BstMCI | CGRYCG | 1 cut(s) | 2638 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 500, 850, 911, 2047, 2162 |
| BstNI | CCWGG | 8 cut(s) | 292, 301, 379, 1190, 1372, 1401, 1521, 2240 |
| BstSFI | CTRYAG | 1 cut(s) | 676 |
| BstSLI | GKGCMC | 1 cut(s) | 1464 |
| BstV1I | GCAGC | 6 cut(s) | 400, 481, 1297, 1972, 1975, 2458 |
| BstV2I | GAAGAC | 3 cut(s) | 679, 1658, 1688 |
| BstX2I | RGATCY | 3 cut(s) | 1144, 1691, 1844 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 448 |
| BstYI | RGATCY | 3 cut(s) | 1144, 1691, 1844 |
| BstZ17I | GTATAC | 1 cut(s) | 1238 |
| Bsu15I | ATCGAT | 1 cut(s) | 1438 |
| Bsu36I | CCTNAGG | 2 cut(s) | 763, 1052 |
| BsuI | GTATCC | 1 cut(s) | 1050 |
| BsuTUI | ATCGAT | 1 cut(s) | 1438 |
| BtgZI | GCGATG | 1 cut(s) | 1995 |
| BtrI | CACGTC | 1 cut(s) | 2200 |
| BtsCI | GGATG | 3 cut(s) | 437, 1167, 1300 |
| BtsI | GCAGTG | 2 cut(s) | 26, 537 |
| BtsIMutI | CAGTG | 7 cut(s) | 26, 211, 334, 537, 785, 810, 1776 |
| Cac8I | GCNNGC | 2 cut(s) | 780, 2659 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1673 |
| CciI | TCATGA | 1 cut(s) | 2230 |
| CfoI | GCGC | 3 cut(s) | 384, 413, 2348 |
| ClaI | ATCGAT | 1 cut(s) | 1438 |
| CseI | GACGC | 1 cut(s) | 1027 |
| CsiI | ACCWGGT | 1 cut(s) | 1370 |
| Csp6I | GTAC | 5 cut(s) | 79, 695, 790, 1298, 2522 |
| CviAII | CATG | 9 cut(s) | 237, 466, 518, 1011, 1287, 1454, 2177, 2231, 2300 |
| CviQI | GTAC | 5 cut(s) | 79, 695, 790, 1298, 2522 |
| DdeI | CTNAG | 9 cut(s) | 147, 407, 543, 763, 837, 1052, 1096, 1859, 2255 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 122 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 122 |
| EaeI | YGGCCR | 3 cut(s) | 272, 1723, 2236 |
| Eam1104I | CTCTTC | 2 cut(s) | 1554, 2541 |
| EarI | CTCTTC | 2 cut(s) | 1554, 2541 |
| EciI | GGCGGA | 2 cut(s) | 20, 364 |
| Eco130I | CCWWGG | 1 cut(s) | 889 |
| Eco147I | AGGCCT | 1 cut(s) | 514 |
| Eco24I | GRGCYC | 1 cut(s) | 1464 |
| Eco31I | GGTCTC | 1 cut(s) | 726 |
| Eco47I | GGWCC | 5 cut(s) | 134, 208, 1073, 2082, 2242 |
| Eco47III | AGCGCT | 1 cut(s) | 412 |
| Eco57I | CTGAAG | 5 cut(s) | 684, 1825, 1932, 1950, 2187 |
| Eco81I | CCTNAGG | 2 cut(s) | 763, 1052 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1288, 2258 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1461, 2082, 2242 |
| EcoRI | GAATTC | 1 cut(s) | 1245 |
| EcoRII | CCWGG | 8 cut(s) | 290, 299, 377, 1188, 1370, 1399, 1519, 2238 |
| EcoT14I | CCWWGG | 1 cut(s) | 889 |
| EcoT22I | ATGCAT | 1 cut(s) | 1485 |
| EcoT38I | GRGCYC | 1 cut(s) | 1464 |
| ErhI | CCWWGG | 1 cut(s) | 889 |
| FaeI | CATG | 9 cut(s) | 240, 469, 521, 1014, 1290, 1457, 2180, 2234, 2303 |
| FaqI | GGGAC | 2 cut(s) | 935, 2228 |
| FatI | CATG | 9 cut(s) | 236, 465, 517, 1010, 1286, 1453, 2176, 2230, 2299 |
| FbaI | TGATCA | 2 cut(s) | 331, 2173 |
| FblI | GTMKAC | 2 cut(s) | 1174, 1237 |
| Fnu4HI | GCNGC | 6 cut(s) | 414, 495, 1311, 1986, 1989, 2472 |
| FokI | GGATG | 3 cut(s) | 424, 1174, 1307 |
| FriOI | GRGCYC | 1 cut(s) | 1464 |
| Fsp4HI | GCNGC | 6 cut(s) | 414, 495, 1311, 1986, 1989, 2472 |
| FspBI | CTAG | 6 cut(s) | 779, 890, 1511, 1644, 2066, 2564 |
| GlaI | GCGC | 3 cut(s) | 383, 412, 2347 |
| GluI | GCNGC | 6 cut(s) | 414, 495, 1311, 1986, 1989, 2472 |
| GsaI | CCCAGC | 3 cut(s) | 507, 2030, 2249 |
| HaeII | RGCGCY | 2 cut(s) | 385, 414 |
| HapII | CCGG | 4 cut(s) | 206, 896, 1044, 1495 |
| HgaI | GACGC | 1 cut(s) | 1027 |
| HhaI | GCGC | 3 cut(s) | 384, 413, 2348 |
| Hin1II | CATG | 9 cut(s) | 240, 469, 521, 1014, 1290, 1457, 2180, 2234, 2303 |
| Hin6I | GCGC | 3 cut(s) | 382, 411, 2346 |
| HinP1I | GCGC | 3 cut(s) | 382, 411, 2346 |
| HincII | GTYRAC | 3 cut(s) | 817, 939, 1783 |
| HindII | GTYRAC | 3 cut(s) | 817, 939, 1783 |
| HindIII | AAGCTT | 2 cut(s) | 149, 2154 |
| HinfI | GANTC | 7 cut(s) | 92, 478, 1185, 1603, 1772, 2206, 2696 |
| HpaII | CCGG | 4 cut(s) | 206, 896, 1044, 1495 |
| HphI | GGTGA | 7 cut(s) | 109, 236, 341, 779, 1360, 1568, 2215 |
| Hpy166II | GTNNAC | 9 cut(s) | 211, 695, 817, 939, 1175, 1238, 1783, 1967, 2382 |
| Hpy188I | TCNGA | 9 cut(s) | 16, 253, 1084, 1322, 1844, 1867, 1888, 1907, 2647 |
| Hpy8I | GTNNAC | 9 cut(s) | 211, 695, 817, 939, 1175, 1238, 1783, 1967, 2382 |
| Hpy99I | CGWCG | 3 cut(s) | 2201, 2409, 2709 |
| HpyAV | CCTTC | 9 cut(s) | 201, 337, 708, 1029, 1547, 1849, 1925, 2002, 2444 |
| HpyCH4III | ACNGT | 9 cut(s) | 12, 83, 124, 215, 329, 789, 814, 1669, 1780 |
| HpyCH4IV | ACGT | 6 cut(s) | 77, 489, 986, 2199, 2384, 2704 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 500, 850, 911, 2047, 2162 |
| HpyF3I | CTNAG | 9 cut(s) | 147, 407, 543, 763, 837, 1052, 1096, 1859, 2255 |
| HpySE526I | ACGT | 6 cut(s) | 77, 489, 986, 2199, 2384, 2704 |
| Hsp92II | CATG | 9 cut(s) | 240, 469, 521, 1014, 1290, 1457, 2180, 2234, 2303 |
| HspAI | GCGC | 3 cut(s) | 382, 411, 2346 |
| Ksp22I | TGATCA | 2 cut(s) | 331, 2173 |
| LguI | GCTCTTC | 1 cut(s) | 2541 |
| LmnI | GCTCC | 2 cut(s) | 1636, 2335 |
| Lsp1109I | GCAGC | 6 cut(s) | 400, 481, 1297, 1972, 1975, 2458 |
| LweI | GCATC | 6 cut(s) | 303, 751, 1297, 1972, 2302, 2450 |
| MabI | ACCWGGT | 1 cut(s) | 1370 |
| MaeI | CTAG | 6 cut(s) | 779, 890, 1511, 1644, 2066, 2564 |
| MaeII | ACGT | 6 cut(s) | 77, 489, 986, 2199, 2384, 2704 |
| MaeIII | GTNAC | 7 cut(s) | 113, 617, 867, 1390, 1663, 1877, 2693 |
| MbiI | CCGCTC | 1 cut(s) | 2486 |
| MflI | RGATCY | 3 cut(s) | 1144, 1691, 1844 |
| MhlI | GDGCHC | 3 cut(s) | 651, 1464, 1762 |
| MlsI | TGGCCA | 2 cut(s) | 274, 2238 |
| MluNI | TGGCCA | 2 cut(s) | 274, 2238 |
| MlyI | GAGTC | 3 cut(s) | 487, 1194, 2690 |
| MmeI | TCCRAC | 5 cut(s) | 231, 465, 578, 995, 1100 |
| Mox20I | TGGCCA | 2 cut(s) | 274, 2238 |
| Mph1103I | ATGCAT | 1 cut(s) | 1485 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1061, 1214, 1361 |
| MscI | TGGCCA | 2 cut(s) | 274, 2238 |
| MslI | CAYNNNNRTG | 2 cut(s) | 615, 1791 |
| Msp20I | TGGCCA | 2 cut(s) | 274, 2238 |
| MspA1I | CMGCKG | 1 cut(s) | 2431 |
| MspI | CCGG | 4 cut(s) | 206, 896, 1044, 1495 |
| MvaI | CCWGG | 8 cut(s) | 292, 301, 379, 1190, 1372, 1401, 1521, 2240 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 500, 850, 911, 2047, 2162 |
| NciI | CCSGG | 3 cut(s) | 896, 1044, 1496 |
| NheI | GCTAGC | 1 cut(s) | 778 |
| NlaIII | CATG | 9 cut(s) | 240, 469, 521, 1014, 1290, 1457, 2180, 2234, 2303 |
| NlaIV | GGNNCC | 7 cut(s) | 523, 843, 1093, 1462, 1693, 2084, 2244 |
| NmeAIII | GCCGAG | 1 cut(s) | 441 |
| NmuCI | GTSAC | 5 cut(s) | 113, 617, 1663, 1877, 2693 |
| NsiI | ATGCAT | 1 cut(s) | 1485 |
| NspV | TTCGAA | 2 cut(s) | 585, 1995 |
| PagI | TCATGA | 1 cut(s) | 2230 |
| PceI | AGGCCT | 1 cut(s) | 514 |
| PciSI | GCTCTTC | 1 cut(s) | 2541 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 79, 123 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1061, 1214, 1361 |
| PfeI | GAWTC | 4 cut(s) | 92, 1603, 1772, 2206 |
| PflFI | GACNNNGTC | 1 cut(s) | 947 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 827 |
| PfoI | TCCNGGA | 1 cut(s) | 1494 |
| PkrI | GCNGC | 6 cut(s) | 415, 496, 1312, 1987, 1990, 2473 |
| Ple19I | CGATCG | 1 cut(s) | 2638 |
| PleI | GAGTC | 3 cut(s) | 486, 1193, 2690 |
| PpsI | GAGTC | 3 cut(s) | 486, 1193, 2690 |
| Ppu21I | YACGTR | 1 cut(s) | 78 |
| PpuMI | RGGWCCY | 2 cut(s) | 2082, 2242 |
| Psp1406I | AACGTT | 1 cut(s) | 986 |
| Psp5II | RGGWCCY | 2 cut(s) | 2082, 2242 |
| Psp6I | CCWGG | 8 cut(s) | 290, 299, 377, 1188, 1370, 1399, 1519, 2238 |
| PspFI | CCCAGC | 3 cut(s) | 503, 2026, 2245 |
| PspGI | CCWGG | 8 cut(s) | 290, 299, 377, 1188, 1370, 1399, 1519, 2238 |
| PspN4I | GGNNCC | 7 cut(s) | 523, 843, 1093, 1462, 1693, 2084, 2244 |
| PspOMI | GGGCCC | 1 cut(s) | 1460 |
| PspPPI | RGGWCCY | 2 cut(s) | 2082, 2242 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1673 |
| PsuI | RGATCY | 3 cut(s) | 1144, 1691, 1844 |
| PsyI | GACNNNGTC | 1 cut(s) | 947 |
| PvuI | CGATCG | 1 cut(s) | 2638 |
| PvuII | CAGCTG | 1 cut(s) | 2431 |
| RsaI | GTAC | 5 cut(s) | 80, 696, 791, 1299, 2523 |
| RsaNI | GTAC | 5 cut(s) | 79, 695, 790, 1298, 2522 |
| RseI | CAYNNNNRTG | 2 cut(s) | 615, 1791 |
| SapI | GCTCTTC | 1 cut(s) | 2541 |
| SatI | GCNGC | 6 cut(s) | 414, 495, 1311, 1986, 1989, 2472 |
| SchI | GAGTC | 3 cut(s) | 487, 1194, 2690 |
| SduI | GDGCHC | 3 cut(s) | 651, 1464, 1762 |
| SexAI | ACCWGGT | 1 cut(s) | 1370 |
| SfaNI | GCATC | 6 cut(s) | 303, 751, 1297, 1972, 2302, 2450 |
| SfcI | CTRYAG | 1 cut(s) | 676 |
| SfuI | TTCGAA | 2 cut(s) | 585, 1995 |
| SinI | GGWCC | 5 cut(s) | 134, 208, 1073, 2082, 2242 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 615, 1791 |
| SmlI | CTYRAG | 2 cut(s) | 1659, 2089 |
| SmoI | CTYRAG | 2 cut(s) | 1659, 2089 |
| SseBI | AGGCCT | 1 cut(s) | 514 |
| SsiI | CCGC | 7 cut(s) | 5, 24, 31, 375, 525, 1313, 2486 |
| SspI | AATATT | 1 cut(s) | 2575 |
| SspMI | CTAG | 6 cut(s) | 779, 890, 1511, 1644, 2066, 2564 |
| StuI | AGGCCT | 1 cut(s) | 514 |
| StyI | CCWWGG | 1 cut(s) | 889 |
| TaaI | ACNGT | 9 cut(s) | 12, 83, 124, 215, 329, 789, 814, 1669, 1780 |
| TaiI | ACGT | 6 cut(s) | 80, 492, 989, 2202, 2387, 2707 |
| TatI | WGTACW | 2 cut(s) | 789, 1297 |
| TfiI | GAWTC | 4 cut(s) | 92, 1603, 1772, 2206 |
| TscAI | CASTG | 7 cut(s) | 33, 218, 341, 544, 792, 817, 1783 |
| TseFI | GTSAC | 5 cut(s) | 113, 617, 1663, 1877, 2693 |
| TseI | GCWGC | 6 cut(s) | 413, 494, 1310, 1985, 1988, 2471 |
| Tsp45I | GTSAC | 5 cut(s) | 113, 617, 1663, 1877, 2693 |
| TspGWI | ACGGA | 1 cut(s) | 2176 |
| TspRI | CASTG | 7 cut(s) | 33, 218, 341, 544, 792, 817, 1783 |
| Tth111I | GACNNNGTC | 1 cut(s) | 947 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 827 |
| VpaK11BI | GGWCC | 5 cut(s) | 134, 208, 1073, 2082, 2242 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1288, 2258 |
| XapI | RAATTY | 7 cut(s) | 231, 1196, 1245, 1333, 2368, 2493, 2588 |
| XbaI | TCTAGA | 1 cut(s) | 1510 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 267 |
| XmaJI | CCTAGG | 1 cut(s) | 889 |
| XmiI | GTMKAC | 2 cut(s) | 1174, 1237 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1061, 1214, 1361 |
| XspI | CTAG | 6 cut(s) | 779, 890, 1511, 1644, 2066, 2564 |
| Zsp2I | ATGCAT | 1 cut(s) | 1485 |