Rmu_sc0000870.1_g000004

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000870.1
OG0000063
Physical Location & Seq
Forward (+)
14803 .. 16880
2078 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000870.1_g000004.1.cds

Sequence Viewer

Length: 1284 bp
atgtcaagaaaccacttctcgtcatggagagatgggttcacacgaacttctcagtgttcggccgttggtaagtactatgaggagcaatttggcaagtttgaaaggtcccgcctaaagcctcattgtcctgatcatagagccaccccacacttccaagcatggtggtcaacttttatcatgaaaaatcttggaaaggacttggttgggacccaacgcgctgcattacaaggacttctgaacttgctaggccccaatgaaggacaaacatcgaagaaacgtggctcaacattggggtatactcgaaacgccaagaaaacaaaaaaatcattcgatgtggtggagaattcggctaatatggatgatggccatgatgctttggctgacaaccaaaatacgtctgaaattgaggatatggccgaaactggtgacgcctcgatcaatagcgcggactcggctgatagcgaaggttcttcggaagaagctcaatcagaaagtggcgatcaagaggtgggagaatctcgaaatagtacaaacctagaattggctcttctcaaccaaactaaaacacattcccctatgttcggaacacttacctctcctcctaatgacgggatgtgtcaaagtgagcaagctatcgtttgcgctccatcttcagccgagcttgtggtgagtgccttggtaacttcaaatactctagacaacaccaagagtcccgaagaggaaaaacttgaaacagcagaaaccaaaaaggcacttgagacggtcagacaatttttgggttgtgatgtgaggacagtgaccgaggctagttttctctctttcaaggaggcggttgaagtacttatttcagccaaatatttctctgaggtagaggcttatgaagttcatgctcgtttggctgttgtaaattttagtctccctccttgtctagaagcccaaaaagagtttgaagccggcgagaagttgaaaagtgagtacaatgacattcgccaatccaacgatcttggccaactccagaagttgaagacttttttggacgagggaaggcaaaaagtgcttgatctgaggaagcagttggccgaagctgaaaagcaagtcaaagtcacttcagccgccatccgaaccattgttccccaacaagatcttaccaagtatagcttgattctgtcatcggtcaagtcgtataacaagaagaggggcatcttgaagcgaaaagtcgaccaaggtatgcaagacttagaagatgttaaagaagctcttcggtcactcttgcccactgattag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

427

Amino Acids

47.37

Weight (kDa)

5.45

Isoelectric Point (pI)

40.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000063)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21382 FvH4_1g29794 FvH4_1g29795 FvH4_2g35573 FvH4_2g35574 FvH4_4g18552 FvH4_5g16044
malus_domestica MD05G1017000.v1.1
prunus_persica Prupe.3G140800_v2.0.a1 Prupe.6G164100_v2.0.a1
pyrus_communis pycom01g04330 pycom03g19820 pycom04g06720 pycom06g11360 pycom06g19000 pycom10g08100 pycom13g16660 pycom13g27590 pycom13g27640 pycom13g27890 pycom16g11770 pycom16g19530
rosa_chinensis RchiOBHm_Chr1g0317341 RchiOBHm_Chr1g0317351 RchiOBHm_Chr1g0320431 RchiOBHm_Chr1g0320711 RchiOBHm_Chr1g0320721 RchiOBHm_Chr1g0321611 RchiOBHm_Chr1g0321621 RchiOBHm_Chr1g0321631 RchiOBHm_Chr1g0323651 RchiOBHm_Chr1g0332991 RchiOBHm_Chr1g0333001 RchiOBHm_Chr1g0335981 RchiOBHm_Chr1g0335991 RchiOBHm_Chr1g0336001 RchiOBHm_Chr1g0350201 RchiOBHm_Chr1g0368201 RchiOBHm_Chr2g0105531 RchiOBHm_Chr2g0105541 RchiOBHm_Chr2g0116571 RchiOBHm_Chr2g0116581 RchiOBHm_Chr2g0121071 RchiOBHm_Chr2g0131351 RchiOBHm_Chr2g0131661 RchiOBHm_Chr2g0133021 RchiOBHm_Chr2g0138181 RchiOBHm_Chr2g0138191 RchiOBHm_Chr2g0142701 RchiOBHm_Chr2g0142711 RchiOBHm_Chr2g0152981 RchiOBHm_Chr3g0456181 RchiOBHm_Chr3g0456191 RchiOBHm_Chr3g0493631 RchiOBHm_Chr3g0496201 RchiOBHm_Chr4g0401541 RchiOBHm_Chr4g0410311 RchiOBHm_Chr4g0410321 RchiOBHm_Chr4g0419231 RchiOBHm_Chr4g0419511 RchiOBHm_Chr4g0419521 RchiOBHm_Chr5g0004311 RchiOBHm_Chr5g0004321 RchiOBHm_Chr5g0038131 RchiOBHm_Chr5g0038251 RchiOBHm_Chr5g0038261 RchiOBHm_Chr5g0038271 RchiOBHm_Chr5g0052241 RchiOBHm_Chr5g0053911 RchiOBHm_Chr5g0074641 RchiOBHm_Chr5g0076651 RchiOBHm_Chr5g0076661 RchiOBHm_Chr6g0249161 RchiOBHm_Chr6g0249171 RchiOBHm_Chr6g0250961 RchiOBHm_Chr6g0253701 RchiOBHm_Chr6g0262131 RchiOBHm_Chr6g0263181 RchiOBHm_Chr6g0263231 RchiOBHm_Chr6g0263241 RchiOBHm_Chr6g0263251 RchiOBHm_Chr6g0291271 RchiOBHm_Chr7g0194611 RchiOBHm_Chr7g0219691 RchiOBHm_Chr7g0219701 RchiOBHm_Chr7g0225431 RchiOBHm_Chr7g0234221 RchiOBHm_Chr7g0238711 RchiOBHm_Chr7g0238721 RchiOBHm_Chr7g0238731 RchiOBHm_Chr7g0239611 RchiOBHm_Chr7g0239621
rosa_laevigata RLG00000001361 RLG00000001376 RLG00000001860 RLG00000002051 RLG00000002362 RLG00000008940 RLG00000012764 RLG00000018782 RLG00000029639 RLG00000030151
rosa_multiflora Rmu_co8090794.1_g000001 Rmu_co8135356.1_g000001 Rmu_co8224968.1_g000001 Rmu_sc0000016.1_g000020 Rmu_sc0000029.1_g000061 Rmu_sc0000035.1_g000032 Rmu_sc0000060.1_g000041 Rmu_sc0000148.1_g000041 Rmu_sc0000315.1_g000084 Rmu_sc0000527.1_g000005 Rmu_sc0000527.1_g000007 Rmu_sc0000527.1_g000008 Rmu_sc0000648.1_g000002 Rmu_sc0000762.1_g000076 Rmu_sc0000870.1_g000003 Rmu_sc0000870.1_g000004 Rmu_sc0000948.1_g000037 Rmu_sc0000997.1_g000003 Rmu_sc0001047.1_g000041 Rmu_sc0001047.1_g000042 Rmu_sc0001075.1_g000044 Rmu_sc0001174.1_g000006 Rmu_sc0001235.1_g000025 Rmu_sc0001292.1_g000008 Rmu_sc0001301.1_g000038 Rmu_sc0001461.1_g000069 Rmu_sc0001461.1_g000070 Rmu_sc0001669.1_g000041 Rmu_sc0001689.1_g000027 Rmu_sc0001896.1_g000008 Rmu_sc0001909.1_g000013 Rmu_sc0002170.1_g000038 Rmu_sc0002200.1_g000014 Rmu_sc0002283.1_g000027 Rmu_sc0002284.1_g000014 Rmu_sc0002294.1_g000017 Rmu_sc0002294.1_g000018 Rmu_sc0002307.1_g000020 Rmu_sc0002307.1_g000021 Rmu_sc0002307.1_g000023 Rmu_sc0002357.1_g000054 Rmu_sc0002409.1_g000005 Rmu_sc0002535.1_g000002 Rmu_sc0002589.1_g000014 Rmu_sc0002759.1_g000016 Rmu_sc0002759.1_g000017 Rmu_sc0002777.1_g000015 Rmu_sc0002824.1_g000016 Rmu_sc0002872.1_g000005 Rmu_sc0002872.1_g000012 Rmu_sc0002872.1_g000013 Rmu_sc0002942.1_g000019 Rmu_sc0003337.1_g000001 Rmu_sc0003410.1_g000052 Rmu_sc0003445.1_g000010 Rmu_sc0003773.1_g000007 Rmu_sc0003773.1_g000008 Rmu_sc0003895.1_g000002 Rmu_sc0004063.1_g000006 Rmu_sc0004088.1_g000009 Rmu_sc0004088.1_g000010 Rmu_sc0004174.1_g000027 Rmu_sc0004196.1_g000010 Rmu_sc0004515.1_g000006 Rmu_sc0004727.1_g000010 Rmu_sc0004755.1_g000018 Rmu_sc0005016.1_g000030 Rmu_sc0005026.1_g000001 Rmu_sc0005044.1_g000007 Rmu_sc0005284.1_g000001 Rmu_sc0005431.1_g000030 Rmu_sc0005802.1_g000014 Rmu_sc0005802.1_g000015 Rmu_sc0005994.1_g000004 Rmu_sc0005994.1_g000005 Rmu_sc0006059.1_g000048 Rmu_sc0006583.1_g000013 Rmu_sc0006824.1_g000009 Rmu_sc0007458.1_g000005 Rmu_sc0007707.1_g000002 Rmu_sc0008242.1_g000012 Rmu_sc0008713.1_g000006 Rmu_sc0008770.1_g000008 Rmu_sc0009785.1_g000004 Rmu_sc0009785.1_g000005 Rmu_sc0010125.1_g000001 Rmu_sc0010211.1_g000004 Rmu_sc0011034.1_g000001 Rmu_sc0011833.1_g000006 Rmu_sc0014851.1_g000001 Rmu_sc0014899.1_g000001 Rmu_sc0015060.1_g000003 Rmu_sc0015186.1_g000001 Rmu_sc0015248.1_g000003 Rmu_sc0015248.1_g000004 Rmu_sc0015314.1_g000001 Rmu_sc0018098.1_g000002 Rmu_sc0022706.1_g000004 Rmu_sc0023350.1_g000002 Rmu_sc0027636.1_g000001 Rmu_sc0027672.1_g000003 Rmu_sc0030879.1_g000001 Rmu_ssc0000008.1_g000029 Rmu_ssc0000019.1_g000014 Rmu_ssc0000050.1_g000082 Rmu_ssc0000282.1_g000004 Rmu_ssc0000311.1_g000010
rosa_roxburghii Rroxscaffold_1G00015190 Rroxscaffold_1G00031880 Rroxscaffold_1G00031890 Rroxscaffold_1G00059310 Rroxscaffold_1G00060420 Rroxscaffold_1G00067930 Rroxscaffold_1G00075030 Rroxscaffold_2G00082210 Rroxscaffold_2G00122970 Rroxscaffold_3G00218230 Rroxscaffold_3G00219020 Rroxscaffold_3G00219030 Rroxscaffold_3G00223680 Rroxscaffold_3G00223690 Rroxscaffold_3G00223700 Rroxscaffold_3G00226870 Rroxscaffold_3G00226880 Rroxscaffold_3G00232990 Rroxscaffold_3G00265610 Rroxscaffold_3G00265620 Rroxscaffold_3G00265630 Rroxscaffold_4G00318660 Rroxscaffold_4G00319060 Rroxscaffold_4G00323500 Rroxscaffold_5G00357520 Rroxscaffold_5G00366150 Rroxscaffold_5G00377470 Rroxscaffold_6G00395700 Rroxscaffold_6G00413950 Rroxscaffold_7G00187650 Rroxscaffold_7G00198290 Rroxscaffold_7G00198300 Rroxscaffold_7G00208060
rosa_rugosa Rorug01G0173900 Rorug01G0174000 Rorug01G0174100 Rorug01G0174100 Rorug02G0341200 Rorug04G0135700 Rorug04G0135800 Rorug05G0032500 Rorug06G0021800
rosa_samantha Rh1AG036600 Rh1AG245800 Rh1CG021700 Rh1CG021800 Rh1CG085800 Rh1CG085900 Rh1CG187900 Rh1CG229600 Rh1CG239600 Rh1CG246500 Rh1CG246600 Rh2BG478100 Rh2DG341300 Rh2DG366600 Rh2DG375700 Rh2DG384300 Rh2DG487000 Rh2DG504000 Rh2DG504100 Rh3AG311800 Rh3AG327500 Rh3AG328300 Rh3BG345100 Rh3CG320100 Rh4AG005700 Rh4AG067900 Rh4AG068000 Rh4AG084400 Rh4AG106700 Rh4AG160000 Rh4AG173900 Rh4AG174000 Rh4CG125300 Rh4CG125500 Rh4CG264500 Rh4DG110800 Rh5AG047300 Rh5AG085200 Rh5AG126300 Rh5AG127300 Rh5AG203000 Rh5AG332400 Rh5AG332500 Rh5AG342400 Rh5AG344100 Rh5AG375600 Rh5AG378300 Rh5AG386000 Rh5AG529600 Rh5BG125200 Rh5CG137600 Rh5CG137700 Rh5DG125200 Rh6BG134100 Rh6BG175400 Rh6BG179500 Rh6BG179600 Rh6BG181600 Rh6BG181700 Rh6BG191100 Rh6BG232900 Rh6BG259700 Rh6BG259800 Rh7AG028000 Rh7AG319400 Rh7AG352700 Rh7AG352800 Rh7AG352900 Rh7AG482500 Rh7AG482600 Rh7AG503800 Rh7BG334700 Rh7CG200100 Rh7CG336200 Rh7CG370200 Rh7CG370400 Rh7CG370500
rosa_wichuraiana Rw1G001580 Rw1G003570 Rw1G004260 Rw1G004270 Rw1G021170 Rw2G019390 Rw2G040280 Rw2G044050 Rw4G004430 Rw5G010950 Rw5G018350 Rw5G032890 Rw6G002840 Rw6G006510 Rw6G007780 Rw6G033790 Rw7G036320 Rw7G040550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 296, 1218
AccII CGCG 2 cut(s) 216, 446
AciI CCGC 4 cut(s) 109, 446, 830, 1113
AcoI YGGCCR 5 cut(s) 60, 364, 414, 1006, 1077
AcsI RAATTY 2 cut(s) 343, 907
AcuI CTGAAG 2 cut(s) 636, 1092
AcyI GRCGYC 1 cut(s) 429
AfaI GTAC 4 cut(s) 74, 529, 840, 977
AfiI CCNNNNNNNGG 4 cut(s) 257, 541, 581, 608
AgsI TTSAA 9 cut(s) 101, 687, 731, 823, 836, 950, 967, 1024, 1207
AjuI GAANNNNNNNTTGG 2 cut(s) 1016, 1048
AloI GAACNNNNNNTCC 2 cut(s) 1114, 1146
AluBI AGCT 6 cut(s) 482, 632, 661, 1085, 1158, 1256
AluI AGCT 6 cut(s) 482, 632, 661, 1085, 1158, 1256
Alw26I GTCTC 2 cut(s) 752, 920
AoxI GGCC 6 cut(s) 60, 247, 364, 414, 1006, 1077
ApeKI GCWGC 1 cut(s) 218
ApoI RAATTY 2 cut(s) 343, 907
Asp700I GAANNNNTTC 1 cut(s) 1257
AspLEI GCGC 3 cut(s) 218, 446, 644
AspS9I GGNCC 3 cut(s) 105, 207, 248
AsuHPI GGTGA 2 cut(s) 437, 679
AvaII GGWCC 2 cut(s) 105, 207
BalI TGGCCA 2 cut(s) 366, 1008
BbsI GAAGAC 1 cut(s) 1031
BbvI GCAGC 1 cut(s) 205
BccI CCATC 4 cut(s) 26, 356, 655, 1124
BceAI ACGGC 1 cut(s) 47
BclI TGATCA 1 cut(s) 130
BcoDI GTCTC 2 cut(s) 752, 920
BfaI CTAG 5 cut(s) 245, 536, 695, 807, 929
BglII AGATCT 1 cut(s) 1141
BisI GCNGC 2 cut(s) 219, 1113
BlsI GCNGC 2 cut(s) 220, 1114
BmcAI AGTACT 2 cut(s) 74, 840
Bme18I GGWCC 2 cut(s) 105, 207
BmgT120I GGNCC 3 cut(s) 105, 207, 248
BmiI GGNNCC 4 cut(s) 107, 208, 209, 250
BmsI GCATC 2 cut(s) 361, 1209
BpiI GAAGAC 1 cut(s) 1031
BpmI CTGGAG 1 cut(s) 998
BpuEI CTTGAG 1 cut(s) 776
BsaHI GRCGYC 1 cut(s) 429
BsaJI CCNNGG 3 cut(s) 675, 801, 1222
BsaXI ACNNNNNCTCC 2 cut(s) 583, 613
Bsc4I CCNNNNNNNGG 4 cut(s) 257, 541, 581, 608
Bse118I RCCGGY 1 cut(s) 953
Bse1I ACTGG 1 cut(s) 427
BseDI CCNNGG 3 cut(s) 675, 801, 1222
BseGI GGATG 3 cut(s) 364, 618, 1116
BseLI CCNNNNNNNGG 4 cut(s) 257, 541, 581, 608
BseMII CTCAG 3 cut(s) 65, 855, 1055
BseNI ACTGG 1 cut(s) 427
BseRI GAGGAG 2 cut(s) 95, 588
BseX3I CGGCCG 1 cut(s) 60
BseXI GCAGC 1 cut(s) 205
Bsh1236I CGCG 2 cut(s) 216, 446
Bsh1285I CGRYCG 1 cut(s) 63
BshFI GGCC 6 cut(s) 62, 249, 366, 416, 1008, 1079
BsiEI CGRYCG 1 cut(s) 63
BsiSI CCGG 1 cut(s) 954
BslFI GGGAC 3 cut(s) 91, 220, 696
BslI CCNNNNNNNGG 4 cut(s) 257, 541, 581, 608
BsmAI GTCTC 2 cut(s) 752, 920
BsmBI CGTCTC 1 cut(s) 752
BsmFI GGGAC 3 cut(s) 91, 220, 696
BsnI GGCC 6 cut(s) 62, 249, 366, 416, 1008, 1079
Bsp143I GATC 6 cut(s) 130, 435, 499, 1000, 1060, 1141
BspACI CCGC 4 cut(s) 109, 446, 830, 1113
BspANI GGCC 6 cut(s) 62, 249, 366, 416, 1008, 1079
BspCNI CTCAG 3 cut(s) 64, 856, 1056
BspFNI CGCG 2 cut(s) 216, 446
BspHI TCATGA 1 cut(s) 177
BspLI GGNNCC 4 cut(s) 107, 208, 209, 250
BspQI GCTCTTC 2 cut(s) 552, 1263
BsrFI RCCGGY 1 cut(s) 953
BsrI ACTGG 1 cut(s) 427
BssAI RCCGGY 1 cut(s) 953
BssECI CCNNGG 3 cut(s) 675, 801, 1222
BssMI GATC 6 cut(s) 130, 435, 499, 1000, 1060, 1141
BssNAI GTATAC 1 cut(s) 297
BssNI GRCGYC 1 cut(s) 429
BssT1I CCWWGG 2 cut(s) 675, 1222
Bst1107I GTATAC 1 cut(s) 297
Bst4CI ACNGT 2 cut(s) 763, 796
Bst6I CTCTTC 4 cut(s) 552, 711, 1187, 1263
BstACI GRCGYC 1 cut(s) 429
BstAPI GCANNNNNTGC 1 cut(s) 1054
BstC8I GCNNGC 2 cut(s) 630, 955
BstDEI CTNAG 4 cut(s) 51, 864, 1064, 1237
BstF5I GGATG 3 cut(s) 364, 618, 1116
BstFNI CGCG 2 cut(s) 216, 446
BstHHI GCGC 3 cut(s) 218, 446, 644
BstKTI GATC 6 cut(s) 133, 438, 502, 1003, 1063, 1144
BstMAI GTCTC 2 cut(s) 752, 920
BstMBI GATC 6 cut(s) 130, 435, 499, 1000, 1060, 1141
BstMCI CGRYCG 1 cut(s) 63
BstMWI GCNNNNNNNGC 3 cut(s) 452, 896, 1054
BstUI CGCG 2 cut(s) 216, 446
BstV1I GCAGC 1 cut(s) 205
BstV2I GAAGAC 1 cut(s) 1031
BstX2I RGATCY 1 cut(s) 1141
BstYI RGATCY 1 cut(s) 1141
BstZ17I GTATAC 1 cut(s) 297
BstZI CGGCCG 1 cut(s) 60
BsuRI GGCC 6 cut(s) 62, 249, 366, 416, 1008, 1079
BtsCI GGATG 3 cut(s) 364, 618, 1116
BtsIMutI CAGTG 3 cut(s) 59, 801, 1275
Cac8I GCNNGC 2 cut(s) 630, 955
CciI TCATGA 1 cut(s) 177
CfoI GCGC 3 cut(s) 218, 446, 644
Cfr10I RCCGGY 1 cut(s) 953
Cfr13I GGNCC 3 cut(s) 105, 207, 248
CseI GACGC 1 cut(s) 437
Csp6I GTAC 4 cut(s) 73, 528, 839, 976
CspCI CAANNNNNGTGG 2 cut(s) 143, 178
CviAII CATG 5 cut(s) 24, 159, 178, 368, 887
CviQI GTAC 4 cut(s) 73, 528, 839, 976
DdeI CTNAG 4 cut(s) 51, 864, 1064, 1237
DpnI GATC 6 cut(s) 132, 437, 501, 1002, 1062, 1143
DpnII GATC 6 cut(s) 130, 435, 499, 1000, 1060, 1141
EaeI YGGCCR 5 cut(s) 60, 364, 414, 1006, 1077
EagI CGGCCG 1 cut(s) 60
Eam1104I CTCTTC 4 cut(s) 552, 711, 1187, 1263
EarI CTCTTC 4 cut(s) 552, 711, 1187, 1263
EclXI CGGCCG 1 cut(s) 60
Eco130I CCWWGG 2 cut(s) 675, 1222
Eco47I GGWCC 2 cut(s) 105, 207
Eco52I CGGCCG 1 cut(s) 60
Eco57I CTGAAG 2 cut(s) 636, 1092
EcoO109I RGGNCCY 3 cut(s) 105, 207, 248
EcoRI GAATTC 1 cut(s) 343
EcoT14I CCWWGG 2 cut(s) 675, 1222
ErhI CCWWGG 2 cut(s) 675, 1222
Esp3I CGTCTC 1 cut(s) 752
FaeI CATG 5 cut(s) 27, 162, 181, 371, 890
FalI AAGNNNNNCTT 4 cut(s) 1142, 1174, 1242, 1274
FaqI GGGAC 3 cut(s) 91, 220, 696
FatI CATG 5 cut(s) 23, 158, 177, 367, 886
FauI CCCGC 1 cut(s) 116
FbaI TGATCA 1 cut(s) 130
FblI GTMKAC 2 cut(s) 296, 1218
Fnu4HI GCNGC 2 cut(s) 219, 1113
FokI GGATG 3 cut(s) 371, 625, 1103
Fsp4HI GCNGC 2 cut(s) 219, 1113
FspBI CTAG 5 cut(s) 245, 536, 695, 807, 929
GlaI GCGC 3 cut(s) 217, 445, 643
GluI GCNGC 2 cut(s) 219, 1113
GsuI CTGGAG 1 cut(s) 998
HaeIII GGCC 6 cut(s) 62, 249, 366, 416, 1008, 1079
HapII CCGG 1 cut(s) 954
HgaI GACGC 1 cut(s) 437
HhaI GCGC 3 cut(s) 218, 446, 644
Hin1I GRCGYC 1 cut(s) 429
Hin1II CATG 5 cut(s) 27, 162, 181, 371, 890
Hin6I GCGC 3 cut(s) 216, 444, 642
HinP1I GCGC 3 cut(s) 216, 444, 642
HincII GTYRAC 2 cut(s) 168, 1219
HindII GTYRAC 2 cut(s) 168, 1219
HinfI GANTC 4 cut(s) 449, 515, 709, 1162
HpaII CCGG 1 cut(s) 954
HphI GGTGA 2 cut(s) 437, 679
Hpy166II GTNNAC 4 cut(s) 39, 168, 297, 1219
Hpy188I TCNGA 9 cut(s) 237, 400, 475, 490, 584, 767, 865, 1065, 1121
Hpy8I GTNNAC 4 cut(s) 39, 168, 297, 1219
HpyAV CCTTC 3 cut(s) 251, 458, 1038
HpyCH4III ACNGT 2 cut(s) 763, 796
HpyCH4IV ACGT 2 cut(s) 277, 395
HpyCH4V TGCA 2 cut(s) 221, 1231
HpyF10VI GCNNNNNNNGC 3 cut(s) 452, 896, 1054
HpyF3I CTNAG 4 cut(s) 51, 864, 1064, 1237
HpySE526I ACGT 2 cut(s) 277, 395
Hsp92I GRCGYC 1 cut(s) 429
Hsp92II CATG 5 cut(s) 27, 162, 181, 371, 890
HspAI GCGC 3 cut(s) 216, 444, 642
KflI GGGWCCC 1 cut(s) 207
KroI GCCGGC 1 cut(s) 953
KroNI GCCGGC 1 cut(s) 955
Ksp22I TGATCA 1 cut(s) 130
Kzo9I GATC 6 cut(s) 130, 435, 499, 1000, 1060, 1141
LguI GCTCTTC 2 cut(s) 552, 1263
LmnI GCTCC 2 cut(s) 82, 649
LpnPI CCDG 4 cut(s) 141, 408, 967, 1028
Lsp1109I GCAGC 1 cut(s) 205
LweI GCATC 2 cut(s) 361, 1209
MaeI CTAG 5 cut(s) 245, 536, 695, 807, 929
MaeII ACGT 2 cut(s) 277, 395
MaeIII GTNAC 5 cut(s) 425, 679, 796, 1102, 1263
MalI GATC 6 cut(s) 132, 437, 501, 1002, 1062, 1143
MboI GATC 6 cut(s) 130, 435, 499, 1000, 1060, 1141
MflI RGATCY 1 cut(s) 1141
MlsI TGGCCA 2 cut(s) 366, 1008
MluCI AATT 6 cut(s) 86, 343, 402, 539, 770, 907
MluNI TGGCCA 2 cut(s) 366, 1008
MlyI GAGTC 2 cut(s) 443, 718
MmeI TCCRAC 1 cut(s) 1020
Mox20I TGGCCA 2 cut(s) 366, 1008
MroNI GCCGGC 1 cut(s) 953
MroXI GAANNNNTTC 1 cut(s) 1257
MscI TGGCCA 2 cut(s) 366, 1008
MseI TTAA 1 cut(s) 1248
Msp20I TGGCCA 2 cut(s) 366, 1008
MspI CCGG 1 cut(s) 954
MvnI CGCG 2 cut(s) 216, 446
MwoI GCNNNNNNNGC 3 cut(s) 452, 896, 1054
NaeI GCCGGC 1 cut(s) 955
NdeII GATC 6 cut(s) 130, 435, 499, 1000, 1060, 1141
NgoMIV GCCGGC 1 cut(s) 953
NlaIII CATG 5 cut(s) 27, 162, 181, 371, 890
NlaIV GGNNCC 4 cut(s) 107, 208, 209, 250
NmeAIII GCCGAG 2 cut(s) 431, 682
NmuCI GTSAC 4 cut(s) 425, 796, 1102, 1263
PagI TCATGA 1 cut(s) 177
PciSI GCTCTTC 2 cut(s) 552, 1263
PcsI WCGNNNNNNNCGW 1 cut(s) 1178
PdiI GCCGGC 1 cut(s) 955
PdmI GAANNNNTTC 1 cut(s) 1257
PfeI GAWTC 2 cut(s) 515, 1162
PkrI GCNGC 2 cut(s) 220, 1114
PleI GAGTC 2 cut(s) 443, 717
PpsI GAGTC 2 cut(s) 443, 717
PpuMI RGGWCCY 2 cut(s) 105, 207
Psp5II RGGWCCY 2 cut(s) 105, 207
PspN4I GGNNCC 4 cut(s) 107, 208, 209, 250
PspPI GGNCC 3 cut(s) 105, 207, 248
PspPPI RGGWCCY 2 cut(s) 105, 207
PsuI RGATCY 1 cut(s) 1141
RsaI GTAC 4 cut(s) 74, 529, 840, 977
RsaNI GTAC 4 cut(s) 73, 528, 839, 976
SalI GTCGAC 1 cut(s) 1217
SapI GCTCTTC 2 cut(s) 552, 1263
SaqAI TTAA 1 cut(s) 1248
SatI GCNGC 2 cut(s) 219, 1113
Sau3AI GATC 6 cut(s) 130, 435, 499, 1000, 1060, 1141
Sau96I GGNCC 3 cut(s) 105, 207, 248
ScaI AGTACT 2 cut(s) 74, 840
SchI GAGTC 2 cut(s) 443, 718
SfaNI GCATC 2 cut(s) 361, 1209
SinI GGWCC 2 cut(s) 105, 207
SmlI CTYRAG 1 cut(s) 755
SmoI CTYRAG 1 cut(s) 755
Sse9I AATT 6 cut(s) 86, 343, 402, 539, 770, 907
SsiI CCGC 4 cut(s) 109, 446, 830, 1113
SspI AATATT 1 cut(s) 857
SspMI CTAG 5 cut(s) 245, 536, 695, 807, 929
StyI CCWWGG 2 cut(s) 675, 1222
TaaI ACNGT 2 cut(s) 763, 796
TaiI ACGT 2 cut(s) 280, 398
TaqI TCGA 6 cut(s) 269, 301, 330, 434, 520, 1218
TaqII GACCGA 3 cut(s) 815, 1162, 1251
TasI AATT 6 cut(s) 86, 343, 402, 539, 770, 907
TatI WGTACW 4 cut(s) 72, 527, 838, 975
TauI GCSGC 1 cut(s) 1115
TfiI GAWTC 2 cut(s) 515, 1162
Tru1I TTAA 1 cut(s) 1248
Tru9I TTAA 1 cut(s) 1248
TscAI CASTG 3 cut(s) 59, 801, 1282
TseFI GTSAC 4 cut(s) 425, 796, 1102, 1263
TseI GCWGC 1 cut(s) 218
Tsp45I GTSAC 4 cut(s) 425, 796, 1102, 1263
TspDTI ATGAA 4 cut(s) 194, 270, 875, 894
TspRI CASTG 3 cut(s) 59, 801, 1282
VpaK11BI GGWCC 2 cut(s) 105, 207
XapI RAATTY 2 cut(s) 343, 907
XbaI TCTAGA 2 cut(s) 694, 928
XmiI GTMKAC 2 cut(s) 296, 1218
XmnI GAANNNNTTC 1 cut(s) 1257
XspI CTAG 5 cut(s) 245, 536, 695, 807, 929
ZrmI AGTACT 2 cut(s) 74, 840
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.