RLG00000018782

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000063
Physical Location & Seq
Forward (+)
35997237 .. 35999932
2696 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000018782

Sequence Viewer

Length: 1587 bp
ATGGAGGATGCGGTGTATGAAGGAGTAATTCATGAATTATCAGGGGACAATCCACCATCCTGTTATTTGGGTCCTCACTTTCCTGGAGGCATGCCGCAAGTAATCTCGCAGGTTCTTGATGAATACCAAACTGACACCTCGTGGCATTTTTCTGAACACTGCTTTAAGATGTTCTACACACTTAGAAGTTTAGAGAGCTTCTCTGTCTGCTATTCTCAATGGCATCCAGCCTCCACTGCACTCGGTTTGAATGAACCATCAGAAGTTCTTAGTGATGTTCAATTAAGAGAAACTTGGGCCAGCTTTCTAATTTCACGGGATCTGCATTATGGGCTTGCAACCTCCAGCAAATACAAACCAGGTGTTGAGATTTACCTCCCCAACTACTTCGCTCGTCAGTTTGGATTCATGCAAAGTTGCCCTGTCCCATATCAACATTCTGAAAATCTTTTGAGTTCATGGCGCCGGAAATTCAGATCAAAGAGCTTGTGTATCTCGGTTTCAAAACACTTCCGTCAACACTTCAACCGTTTTAAGATGAGAATATTTCAACCATGCAGTAGACCAACTCCTCCTTTTTCTATCTGGTGGTCAAGTTACTCTTCAAAATTTGTCAATGCAGATCTGATGGACCTATTCACAACACGAATATTACAAGGTATCTCCAATGGTCCTGAGTATCGGCGAGCTCAGAAAAGGGGACGAACAGATGAAGATTTGGCTAGCCCAAATGACCGAGATGGAGAGAATCACTCGGCCTCAAAAAAACGAAACACCATTCTTATTACCGATATTACTGAAATCTCTCCTTCTAACTCTAGTGACAGCAACCACACAGTAGAATTATTCCTCGACTATAATGAAGCTGCCAATAAGACTTGGGTGGAAAGTAAAGACACCATGTCAATTGAAGATTCTGCTCAATCCGTACCCAAGGATGATGAGCCAAATCAAACATCATATTATCAAGAACCTTCTCCAATCGAGATTGTAGAAGAGACAACAAGCTTCCAATATCAACAAACTAATCAGGTCATTCCACCAACTCATCTTCTATCAGCAGATACCTTAGCTTTGCTAGACAAGCTCACCGATCAACAAACTAGCCATGAACAAGATATGGTCAACAATGACCAAATAGCAGTCGCGGCCAAGTTTGTAGACGATCTTTGTCATACTGAACTTGTAGGTGTGGTCGGCGATAACCTTTACAGCCGTTTCAAGGAGGAGCTAAACGTTTTGATCTCGGCGCACCATTTTAGTCATGAAAAAGCACAAAAAATTGAAGAACACCTTGAGATTATGGACGCTAGCATTCCTGTTTACATCACTGCTCTAAAAAAGTGGGACACCGGCCGTAAACTTGAAAGAAATTTTGGAGATATTGTTGCACGACAAATTCGCGACCGTATGACTCAGACGACAGCTACTATCCAGCAACAATCTAGTGAACATCACCGTGAGCTTGAAATTTTCTCAAGGCACGGTAAAGCTACTCAAGAATTCTTGGCTAAGAAAGAAGAAATTGACAGCGTGCTGACCACGACTAGTATTGACTGGGACGCATGGAGGAAGATTCTTCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

529

Amino Acids

60.75

Weight (kDa)

5.51

Isoelectric Point (pI)

48.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000063)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21382 FvH4_1g29794 FvH4_1g29795 FvH4_2g35573 FvH4_2g35574 FvH4_4g18552 FvH4_5g16044
malus_domestica MD05G1017000.v1.1
prunus_persica Prupe.3G140800_v2.0.a1 Prupe.6G164100_v2.0.a1
pyrus_communis pycom01g04330 pycom03g19820 pycom04g06720 pycom06g11360 pycom06g19000 pycom10g08100 pycom13g16660 pycom13g27590 pycom13g27640 pycom13g27890 pycom16g11770 pycom16g19530
rosa_chinensis RchiOBHm_Chr1g0317341 RchiOBHm_Chr1g0317351 RchiOBHm_Chr1g0320431 RchiOBHm_Chr1g0320711 RchiOBHm_Chr1g0320721 RchiOBHm_Chr1g0321611 RchiOBHm_Chr1g0321621 RchiOBHm_Chr1g0321631 RchiOBHm_Chr1g0323651 RchiOBHm_Chr1g0332991 RchiOBHm_Chr1g0333001 RchiOBHm_Chr1g0335981 RchiOBHm_Chr1g0335991 RchiOBHm_Chr1g0336001 RchiOBHm_Chr1g0350201 RchiOBHm_Chr1g0368201 RchiOBHm_Chr2g0105531 RchiOBHm_Chr2g0105541 RchiOBHm_Chr2g0116571 RchiOBHm_Chr2g0116581 RchiOBHm_Chr2g0121071 RchiOBHm_Chr2g0131351 RchiOBHm_Chr2g0131661 RchiOBHm_Chr2g0133021 RchiOBHm_Chr2g0138181 RchiOBHm_Chr2g0138191 RchiOBHm_Chr2g0142701 RchiOBHm_Chr2g0142711 RchiOBHm_Chr2g0152981 RchiOBHm_Chr3g0456181 RchiOBHm_Chr3g0456191 RchiOBHm_Chr3g0493631 RchiOBHm_Chr3g0496201 RchiOBHm_Chr4g0401541 RchiOBHm_Chr4g0410311 RchiOBHm_Chr4g0410321 RchiOBHm_Chr4g0419231 RchiOBHm_Chr4g0419511 RchiOBHm_Chr4g0419521 RchiOBHm_Chr5g0004311 RchiOBHm_Chr5g0004321 RchiOBHm_Chr5g0038131 RchiOBHm_Chr5g0038251 RchiOBHm_Chr5g0038261 RchiOBHm_Chr5g0038271 RchiOBHm_Chr5g0052241 RchiOBHm_Chr5g0053911 RchiOBHm_Chr5g0074641 RchiOBHm_Chr5g0076651 RchiOBHm_Chr5g0076661 RchiOBHm_Chr6g0249161 RchiOBHm_Chr6g0249171 RchiOBHm_Chr6g0250961 RchiOBHm_Chr6g0253701 RchiOBHm_Chr6g0262131 RchiOBHm_Chr6g0263181 RchiOBHm_Chr6g0263231 RchiOBHm_Chr6g0263241 RchiOBHm_Chr6g0263251 RchiOBHm_Chr6g0291271 RchiOBHm_Chr7g0194611 RchiOBHm_Chr7g0219691 RchiOBHm_Chr7g0219701 RchiOBHm_Chr7g0225431 RchiOBHm_Chr7g0234221 RchiOBHm_Chr7g0238711 RchiOBHm_Chr7g0238721 RchiOBHm_Chr7g0238731 RchiOBHm_Chr7g0239611 RchiOBHm_Chr7g0239621
rosa_laevigata RLG00000001361 RLG00000001376 RLG00000001860 RLG00000002051 RLG00000002362 RLG00000008940 RLG00000012764 RLG00000018782 RLG00000029639 RLG00000030151
rosa_multiflora Rmu_co8090794.1_g000001 Rmu_co8135356.1_g000001 Rmu_co8224968.1_g000001 Rmu_sc0000016.1_g000020 Rmu_sc0000029.1_g000061 Rmu_sc0000035.1_g000032 Rmu_sc0000060.1_g000041 Rmu_sc0000148.1_g000041 Rmu_sc0000315.1_g000084 Rmu_sc0000527.1_g000005 Rmu_sc0000527.1_g000007 Rmu_sc0000527.1_g000008 Rmu_sc0000648.1_g000002 Rmu_sc0000762.1_g000076 Rmu_sc0000870.1_g000003 Rmu_sc0000870.1_g000004 Rmu_sc0000948.1_g000037 Rmu_sc0000997.1_g000003 Rmu_sc0001047.1_g000041 Rmu_sc0001047.1_g000042 Rmu_sc0001075.1_g000044 Rmu_sc0001174.1_g000006 Rmu_sc0001235.1_g000025 Rmu_sc0001292.1_g000008 Rmu_sc0001301.1_g000038 Rmu_sc0001461.1_g000069 Rmu_sc0001461.1_g000070 Rmu_sc0001669.1_g000041 Rmu_sc0001689.1_g000027 Rmu_sc0001896.1_g000008 Rmu_sc0001909.1_g000013 Rmu_sc0002170.1_g000038 Rmu_sc0002200.1_g000014 Rmu_sc0002283.1_g000027 Rmu_sc0002284.1_g000014 Rmu_sc0002294.1_g000017 Rmu_sc0002294.1_g000018 Rmu_sc0002307.1_g000020 Rmu_sc0002307.1_g000021 Rmu_sc0002307.1_g000023 Rmu_sc0002357.1_g000054 Rmu_sc0002409.1_g000005 Rmu_sc0002535.1_g000002 Rmu_sc0002589.1_g000014 Rmu_sc0002759.1_g000016 Rmu_sc0002759.1_g000017 Rmu_sc0002777.1_g000015 Rmu_sc0002824.1_g000016 Rmu_sc0002872.1_g000005 Rmu_sc0002872.1_g000012 Rmu_sc0002872.1_g000013 Rmu_sc0002942.1_g000019 Rmu_sc0003337.1_g000001 Rmu_sc0003410.1_g000052 Rmu_sc0003445.1_g000010 Rmu_sc0003773.1_g000007 Rmu_sc0003773.1_g000008 Rmu_sc0003895.1_g000002 Rmu_sc0004063.1_g000006 Rmu_sc0004088.1_g000009 Rmu_sc0004088.1_g000010 Rmu_sc0004174.1_g000027 Rmu_sc0004196.1_g000010 Rmu_sc0004515.1_g000006 Rmu_sc0004727.1_g000010 Rmu_sc0004755.1_g000018 Rmu_sc0005016.1_g000030 Rmu_sc0005026.1_g000001 Rmu_sc0005044.1_g000007 Rmu_sc0005284.1_g000001 Rmu_sc0005431.1_g000030 Rmu_sc0005802.1_g000014 Rmu_sc0005802.1_g000015 Rmu_sc0005994.1_g000004 Rmu_sc0005994.1_g000005 Rmu_sc0006059.1_g000048 Rmu_sc0006583.1_g000013 Rmu_sc0006824.1_g000009 Rmu_sc0007458.1_g000005 Rmu_sc0007707.1_g000002 Rmu_sc0008242.1_g000012 Rmu_sc0008713.1_g000006 Rmu_sc0008770.1_g000008 Rmu_sc0009785.1_g000004 Rmu_sc0009785.1_g000005 Rmu_sc0010125.1_g000001 Rmu_sc0010211.1_g000004 Rmu_sc0011034.1_g000001 Rmu_sc0011833.1_g000006 Rmu_sc0014851.1_g000001 Rmu_sc0014899.1_g000001 Rmu_sc0015060.1_g000003 Rmu_sc0015186.1_g000001 Rmu_sc0015248.1_g000003 Rmu_sc0015248.1_g000004 Rmu_sc0015314.1_g000001 Rmu_sc0018098.1_g000002 Rmu_sc0022706.1_g000004 Rmu_sc0023350.1_g000002 Rmu_sc0027636.1_g000001 Rmu_sc0027672.1_g000003 Rmu_sc0030879.1_g000001 Rmu_ssc0000008.1_g000029 Rmu_ssc0000019.1_g000014 Rmu_ssc0000050.1_g000082 Rmu_ssc0000282.1_g000004 Rmu_ssc0000311.1_g000010
rosa_roxburghii Rroxscaffold_1G00015190 Rroxscaffold_1G00031880 Rroxscaffold_1G00031890 Rroxscaffold_1G00059310 Rroxscaffold_1G00060420 Rroxscaffold_1G00067930 Rroxscaffold_1G00075030 Rroxscaffold_2G00082210 Rroxscaffold_2G00122970 Rroxscaffold_3G00218230 Rroxscaffold_3G00219020 Rroxscaffold_3G00219030 Rroxscaffold_3G00223680 Rroxscaffold_3G00223690 Rroxscaffold_3G00223700 Rroxscaffold_3G00226870 Rroxscaffold_3G00226880 Rroxscaffold_3G00232990 Rroxscaffold_3G00265610 Rroxscaffold_3G00265620 Rroxscaffold_3G00265630 Rroxscaffold_4G00318660 Rroxscaffold_4G00319060 Rroxscaffold_4G00323500 Rroxscaffold_5G00357520 Rroxscaffold_5G00366150 Rroxscaffold_5G00377470 Rroxscaffold_6G00395700 Rroxscaffold_6G00413950 Rroxscaffold_7G00187650 Rroxscaffold_7G00198290 Rroxscaffold_7G00198300 Rroxscaffold_7G00208060
rosa_rugosa Rorug01G0173900 Rorug01G0174000 Rorug01G0174100 Rorug01G0174100 Rorug02G0341200 Rorug04G0135700 Rorug04G0135800 Rorug05G0032500 Rorug06G0021800
rosa_samantha Rh1AG036600 Rh1AG245800 Rh1CG021700 Rh1CG021800 Rh1CG085800 Rh1CG085900 Rh1CG187900 Rh1CG229600 Rh1CG239600 Rh1CG246500 Rh1CG246600 Rh2BG478100 Rh2DG341300 Rh2DG366600 Rh2DG375700 Rh2DG384300 Rh2DG487000 Rh2DG504000 Rh2DG504100 Rh3AG311800 Rh3AG327500 Rh3AG328300 Rh3BG345100 Rh3CG320100 Rh4AG005700 Rh4AG067900 Rh4AG068000 Rh4AG084400 Rh4AG106700 Rh4AG160000 Rh4AG173900 Rh4AG174000 Rh4CG125300 Rh4CG125500 Rh4CG264500 Rh4DG110800 Rh5AG047300 Rh5AG085200 Rh5AG126300 Rh5AG127300 Rh5AG203000 Rh5AG332400 Rh5AG332500 Rh5AG342400 Rh5AG344100 Rh5AG375600 Rh5AG378300 Rh5AG386000 Rh5AG529600 Rh5BG125200 Rh5CG137600 Rh5CG137700 Rh5DG125200 Rh6BG134100 Rh6BG175400 Rh6BG179500 Rh6BG179600 Rh6BG181600 Rh6BG181700 Rh6BG191100 Rh6BG232900 Rh6BG259700 Rh6BG259800 Rh7AG028000 Rh7AG319400 Rh7AG352700 Rh7AG352800 Rh7AG352900 Rh7AG482500 Rh7AG482600 Rh7AG503800 Rh7BG334700 Rh7CG200100 Rh7CG336200 Rh7CG370200 Rh7CG370400 Rh7CG370500
rosa_wichuraiana Rw1G001580 Rw1G003570 Rw1G004260 Rw1G004270 Rw1G021170 Rw2G019390 Rw2G040280 Rw2G044050 Rw4G004430 Rw5G010950 Rw5G018350 Rw5G032890 Rw6G002840 Rw6G006510 Rw6G007780 Rw6G033790 Rw7G036320 Rw7G040550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 100
AccB1I GGYRCC 1 cut(s) 462
AccI GTMKAC 2 cut(s) 562, 1161
AccII CGCG 2 cut(s) 1148, 1404
AciI CCGC 3 cut(s) 11, 95, 1148
AclI AACGTT 1 cut(s) 1236
AclWI GGATC 1 cut(s) 327
AcoI YGGCCR 2 cut(s) 1149, 1354
AcsI RAATTY 6 cut(s) 470, 608, 1372, 1398, 1470, 1502
AcyI GRCGYC 1 cut(s) 463
AdeI CACNNNGTG 1 cut(s) 141
AfaI GTAC 1 cut(s) 930
AfiI CCNNNNNNNGG 1 cut(s) 1222
AhdI GACNNNNNGTC 1 cut(s) 901
AhlI ACTAGT 1 cut(s) 1547
AjnI CCWGG 2 cut(s) 82, 358
AjuI GAANNNNNNNTTGG 2 cut(s) 1359, 1391
Alw21I GWGCWC 1 cut(s) 691
Alw26I GTCTC 1 cut(s) 992
AlwI GGATC 1 cut(s) 327
AoxI GGCC 4 cut(s) 297, 756, 1149, 1354
ApeKI GCWGC 1 cut(s) 866
ApoI RAATTY 6 cut(s) 470, 608, 1372, 1398, 1470, 1502
AspLEI GCGC 2 cut(s) 465, 1252
AspS9I GGNCC 4 cut(s) 71, 297, 631, 671
AsuHPI GGTGA 2 cut(s) 1081, 1448
AsuNHI GCTAGC 2 cut(s) 722, 1310
AvaII GGWCC 3 cut(s) 71, 631, 671
BanI GGYRCC 1 cut(s) 462
BanII GRGCYC 1 cut(s) 691
BauI CACGAG 1 cut(s) 139
Bbv12I GWGCWC 1 cut(s) 691
BbvI GCAGC 1 cut(s) 853
BccI CCATC 4 cut(s) 64, 265, 622, 734
BceAI ACGGC 2 cut(s) 1200, 1341
BciT130I CCWGG 2 cut(s) 84, 360
BcoDI GTCTC 1 cut(s) 992
BcuI ACTAGT 1 cut(s) 1547
BfaI CTAG 7 cut(s) 723, 819, 1079, 1104, 1311, 1446, 1548
BfoI RGCGCY 1 cut(s) 466
BfuAI ACCTGC 1 cut(s) 100
BglII AGATCT 1 cut(s) 622
BisI GCNGC 3 cut(s) 95, 867, 1149
BlsI GCNGC 3 cut(s) 96, 868, 1150
Bme1390I CCNGG 2 cut(s) 84, 360
Bme18I GGWCC 3 cut(s) 71, 631, 671
BmeRI GACNNNNNGTC 1 cut(s) 901
BmgT120I GGNCC 4 cut(s) 71, 297, 631, 671
BmiI GGNNCC 2 cut(s) 72, 464
BmrFI CCNGG 2 cut(s) 84, 360
BmrI ACTGGG 1 cut(s) 1567
BmsI GCATC 1 cut(s) 232
BmtI GCTAGC 2 cut(s) 726, 1314
BmuI ACTGGG 1 cut(s) 1567
BplI GAGNNNNNCTC 4 cut(s) 185, 217, 737, 769
BpmI CTGGAG 2 cut(s) 105, 328
Bpu10I CCTNAGC 1 cut(s) 1069
BpuEI CTTGAG 3 cut(s) 1316, 1462, 1482
BsaHI GRCGYC 1 cut(s) 463
BsaJI CCNNGG 1 cut(s) 933
BsaXI ACNNNNNCTCC 2 cut(s) 1371, 1401
Bsc4I CCNNNNNNNGG 1 cut(s) 1222
Bse118I RCCGGY 1 cut(s) 1352
Bse1I ACTGG 1 cut(s) 1562
BseBI CCWGG 2 cut(s) 84, 360
BseDI CCNNGG 1 cut(s) 933
BseGI GGATG 4 cut(s) 13, 56, 223, 943
BseLI CCNNNNNNNGG 1 cut(s) 1222
BseMII CTCAG 3 cut(s) 666, 704, 1430
BseNI ACTGG 1 cut(s) 1562
BseRI GAGGAG 2 cut(s) 561, 1241
BseX3I CGGCCG 1 cut(s) 1354
BseXI GCAGC 1 cut(s) 853
BsgI GTGCAG 1 cut(s) 222
Bsh1236I CGCG 2 cut(s) 1148, 1404
Bsh1285I CGRYCG 2 cut(s) 1357, 1408
BshFI GGCC 4 cut(s) 299, 758, 1151, 1356
BshNI GGYRCC 1 cut(s) 462
BsiEI CGRYCG 2 cut(s) 1357, 1408
BsiHKAI GWGCWC 1 cut(s) 691
BsiSI CCGG 2 cut(s) 466, 1353
BslFI GGGAC 5 cut(s) 59, 410, 714, 1361, 1574
BslI CCNNNNNNNGG 1 cut(s) 1222
BsmAI GTCTC 1 cut(s) 992
BsmFI GGGAC 5 cut(s) 59, 410, 714, 1361, 1574
BsmI GAATGC 1 cut(s) 1314
BsnI GGCC 4 cut(s) 299, 758, 1151, 1356
Bsp1286I GDGCHC 1 cut(s) 691
Bsp143I GATC 6 cut(s) 319, 476, 622, 1093, 1165, 1242
Bsp68I TCGCGA 1 cut(s) 1404
BspACI CCGC 3 cut(s) 11, 95, 1148
BspANI GGCC 4 cut(s) 299, 758, 1151, 1356
BspCNI CTCAG 3 cut(s) 667, 703, 1429
BspFNI CGCG 2 cut(s) 1148, 1404
BspHI TCATGA 2 cut(s) 31, 1264
BspLI GGNNCC 2 cut(s) 72, 464
BspMI ACCTGC 1 cut(s) 100
BspOI GCTAGC 2 cut(s) 726, 1314
BspPI GGATC 1 cut(s) 327
BspT107I GGYRCC 1 cut(s) 462
BsrFI RCCGGY 1 cut(s) 1352
BsrI ACTGG 1 cut(s) 1562
BssAI RCCGGY 1 cut(s) 1352
BssECI CCNNGG 1 cut(s) 933
BssMI GATC 6 cut(s) 319, 476, 622, 1093, 1165, 1242
BssNI GRCGYC 1 cut(s) 463
BssSI CACGAG 1 cut(s) 139
BssT1I CCWWGG 1 cut(s) 933
Bst2BI CACGAG 1 cut(s) 139
Bst2UI CCWGG 2 cut(s) 84, 360
Bst4CI ACNGT 5 cut(s) 530, 838, 1409, 1460, 1487
Bst6I CTCTTC 2 cut(s) 607, 990
BstACI GRCGYC 1 cut(s) 463
BstC8I GCNNGC 7 cut(s) 92, 301, 336, 687, 724, 1312, 1535
BstDEI CTNAG 7 cut(s) 182, 269, 675, 690, 1069, 1416, 1512
BstF5I GGATG 4 cut(s) 13, 56, 223, 943
BstFNI CGCG 2 cut(s) 1148, 1404
BstH2I RGCGCY 1 cut(s) 466
BstHHI GCGC 2 cut(s) 465, 1252
BstKTI GATC 6 cut(s) 322, 479, 625, 1096, 1168, 1245
BstMAI GTCTC 1 cut(s) 992
BstMBI GATC 6 cut(s) 319, 476, 622, 1093, 1165, 1242
BstMCI CGRYCG 2 cut(s) 1357, 1408
BstMWI GCNNNNNNNGC 4 cut(s) 236, 331, 1084, 1148
BstNI CCWGG 2 cut(s) 84, 360
BstNSI RCATGY 1 cut(s) 94
BstSCI CCNGG 2 cut(s) 82, 358
BstUI CGCG 2 cut(s) 1148, 1404
BstV1I GCAGC 1 cut(s) 853
BstX2I RGATCY 2 cut(s) 319, 622
BstYI RGATCY 2 cut(s) 319, 622
BstZI CGGCCG 1 cut(s) 1354
BsuRI GGCC 4 cut(s) 299, 758, 1151, 1356
BtsCI GGATG 4 cut(s) 13, 56, 223, 943
BtsI GCAGTG 3 cut(s) 157, 234, 1329
BtsIMutI CAGTG 3 cut(s) 157, 234, 1329
BtuMI TCGCGA 1 cut(s) 1404
BveI ACCTGC 1 cut(s) 100
Cac8I GCNNGC 7 cut(s) 92, 301, 336, 687, 724, 1312, 1535
CciI TCATGA 2 cut(s) 31, 1264
CfoI GCGC 2 cut(s) 465, 1252
Cfr10I RCCGGY 1 cut(s) 1352
Cfr13I GGNCC 4 cut(s) 71, 297, 631, 671
CseI GACGC 2 cut(s) 1316, 1571
CsiI ACCWGGT 1 cut(s) 358
Csp6I GTAC 1 cut(s) 929
CviAII CATG 9 cut(s) 32, 91, 409, 459, 555, 901, 1109, 1265, 1566
CviQI GTAC 1 cut(s) 929
DdeI CTNAG 7 cut(s) 182, 269, 675, 690, 1069, 1416, 1512
DinI GGCGCC 1 cut(s) 464
DpnI GATC 6 cut(s) 321, 478, 624, 1095, 1167, 1244
DpnII GATC 6 cut(s) 319, 476, 622, 1093, 1165, 1242
DraIII CACNNNGTG 1 cut(s) 141
DriI GACNNNNNGTC 1 cut(s) 901
EaeI YGGCCR 2 cut(s) 1149, 1354
EagI CGGCCG 1 cut(s) 1354
Eam1104I CTCTTC 2 cut(s) 607, 990
Eam1105I GACNNNNNGTC 1 cut(s) 901
EarI CTCTTC 2 cut(s) 607, 990
Ecl136II GAGCTC 1 cut(s) 689
EclXI CGGCCG 1 cut(s) 1354
Eco130I CCWWGG 1 cut(s) 933
Eco24I GRGCYC 1 cut(s) 691
Eco47I GGWCC 3 cut(s) 71, 631, 671
Eco52I CGGCCG 1 cut(s) 1354
Eco53kI GAGCTC 1 cut(s) 689
EcoICRI GAGCTC 1 cut(s) 689
EcoO109I RGGNCCY 1 cut(s) 71
EcoRI GAATTC 1 cut(s) 1502
EcoRII CCWGG 2 cut(s) 82, 358
EcoT14I CCWWGG 1 cut(s) 933
EcoT38I GRGCYC 1 cut(s) 691
EgeI GGCGCC 1 cut(s) 464
EheI GGCGCC 1 cut(s) 464
ErhI CCWWGG 1 cut(s) 933
FaeI CATG 9 cut(s) 35, 94, 412, 462, 558, 904, 1112, 1268, 1569
FalI AAGNNNNNCTT 6 cut(s) 277, 309, 586, 618, 1278, 1310
FaqI GGGAC 5 cut(s) 59, 410, 714, 1361, 1574
FatI CATG 9 cut(s) 31, 90, 408, 458, 554, 900, 1108, 1264, 1565
FblI GTMKAC 2 cut(s) 562, 1161
Fnu4HI GCNGC 3 cut(s) 95, 867, 1149
FokI GGATG 4 cut(s) 20, 43, 210, 950
FriOI GRGCYC 1 cut(s) 691
Fsp4HI GCNGC 3 cut(s) 95, 867, 1149
FspBI CTAG 7 cut(s) 723, 819, 1079, 1104, 1311, 1446, 1548
GlaI GCGC 2 cut(s) 464, 1251
GluI GCNGC 3 cut(s) 95, 867, 1149
GsuI CTGGAG 2 cut(s) 105, 328
HaeII RGCGCY 1 cut(s) 466
HaeIII GGCC 4 cut(s) 299, 758, 1151, 1356
HapII CCGG 2 cut(s) 466, 1353
HgaI GACGC 2 cut(s) 1316, 1571
HhaI GCGC 2 cut(s) 465, 1252
Hin1I GRCGYC 1 cut(s) 463
Hin1II CATG 9 cut(s) 35, 94, 412, 462, 558, 904, 1112, 1268, 1569
Hin6I GCGC 2 cut(s) 463, 1250
HinP1I GCGC 2 cut(s) 463, 1250
HincII GTYRAC 2 cut(s) 518, 1126
HindII GTYRAC 2 cut(s) 518, 1126
HindIII AAGCTT 1 cut(s) 1006
HinfI GANTC 5 cut(s) 405, 748, 914, 1414, 1576
HpaII CCGG 2 cut(s) 466, 1353
HphI GGTGA 2 cut(s) 1081, 1448
Hpy166II GTNNAC 7 cut(s) 518, 563, 1126, 1162, 1324, 1361, 1451
Hpy188I TCNGA 7 cut(s) 154, 262, 442, 476, 627, 693, 1419
Hpy188III TCNNGA 8 cut(s) 32, 116, 674, 968, 985, 1265, 1403, 1499
Hpy8I GTNNAC 7 cut(s) 518, 563, 1126, 1162, 1324, 1361, 1451
HpyAV CCTTC 3 cut(s) 14, 819, 984
HpyCH4III ACNGT 5 cut(s) 530, 838, 1409, 1460, 1487
HpyCH4IV ACGT 1 cut(s) 1236
HpyCH4V TGCA 7 cut(s) 239, 325, 338, 412, 558, 620, 1391
HpyF10VI GCNNNNNNNGC 4 cut(s) 236, 331, 1084, 1148
HpyF3I CTNAG 7 cut(s) 182, 269, 675, 690, 1069, 1416, 1512
HpySE526I ACGT 1 cut(s) 1236
Hsp92I GRCGYC 1 cut(s) 463
Hsp92II CATG 9 cut(s) 35, 94, 412, 462, 558, 904, 1112, 1268, 1569
HspAI GCGC 2 cut(s) 463, 1250
KasI GGCGCC 1 cut(s) 462
Kzo9I GATC 6 cut(s) 319, 476, 622, 1093, 1165, 1242
LmnI GCTCC 1 cut(s) 1228
Lsp1109I GCAGC 1 cut(s) 853
LweI GCATC 1 cut(s) 232
MabI ACCWGGT 1 cut(s) 358
MaeI CTAG 7 cut(s) 723, 819, 1079, 1104, 1311, 1446, 1548
MaeII ACGT 1 cut(s) 1236
MaeIII GTNAC 2 cut(s) 596, 821
MalI GATC 6 cut(s) 321, 478, 624, 1095, 1167, 1244
MboI GATC 6 cut(s) 319, 476, 622, 1093, 1165, 1242
MboII GAAGA 9 cut(s) 594, 725, 923, 1007, 1043, 1298, 1532, 1571, 1585
MfeI CAATTG 1 cut(s) 906
MflI RGATCY 2 cut(s) 319, 622
MhlI GDGCHC 1 cut(s) 691
Mly113I GGCGCC 1 cut(s) 463
MlyI GAGTC 1 cut(s) 1408
MseI TTAA 3 cut(s) 165, 284, 534
MslI CAYNNNNRTG 1 cut(s) 1458
MspI CCGG 2 cut(s) 466, 1353
MspR9I CCNGG 2 cut(s) 84, 360
MunI CAATTG 1 cut(s) 906
Mva1269I GAATGC 1 cut(s) 1314
MvaI CCWGG 2 cut(s) 84, 360
MvnI CGCG 2 cut(s) 1148, 1404
MwoI GCNNNNNNNGC 4 cut(s) 236, 331, 1084, 1148
NarI GGCGCC 1 cut(s) 463
NdeII GATC 6 cut(s) 319, 476, 622, 1093, 1165, 1242
NheI GCTAGC 2 cut(s) 722, 1310
NlaIII CATG 9 cut(s) 35, 94, 412, 462, 558, 904, 1112, 1268, 1569
NlaIV GGNNCC 2 cut(s) 72, 464
NmeAIII GCCGAG 2 cut(s) 734, 1226
NmuCI GTSAC 1 cut(s) 821
NruI TCGCGA 1 cut(s) 1404
NspI RCATGY 1 cut(s) 94
PaeI GCATGC 1 cut(s) 94
PagI TCATGA 2 cut(s) 31, 1264
PctI GAATGC 1 cut(s) 1314
PfeI GAWTC 4 cut(s) 405, 748, 914, 1576
PfoI TCCNGGA 1 cut(s) 82
PkrI GCNGC 3 cut(s) 96, 868, 1150
PleI GAGTC 1 cut(s) 1408
PluTI GGCGCC 1 cut(s) 466
PpsI GAGTC 1 cut(s) 1408
PpuMI RGGWCCY 1 cut(s) 71
Psp124BI GAGCTC 1 cut(s) 691
Psp1406I AACGTT 1 cut(s) 1236
Psp5II RGGWCCY 1 cut(s) 71
Psp6I CCWGG 2 cut(s) 82, 358
PspGI CCWGG 2 cut(s) 82, 358
PspN4I GGNNCC 2 cut(s) 72, 464
PspPI GGNCC 4 cut(s) 71, 297, 631, 671
PspPPI RGGWCCY 1 cut(s) 71
PsuI RGATCY 2 cut(s) 319, 622
RruI TCGCGA 1 cut(s) 1404
RsaI GTAC 1 cut(s) 930
RsaNI GTAC 1 cut(s) 929
RseI CAYNNNNRTG 1 cut(s) 1458
SacI GAGCTC 1 cut(s) 691
SaqAI TTAA 3 cut(s) 165, 284, 534
SatI GCNGC 3 cut(s) 95, 867, 1149
Sau3AI GATC 6 cut(s) 319, 476, 622, 1093, 1165, 1242
Sau96I GGNCC 4 cut(s) 71, 297, 631, 671
SchI GAGTC 1 cut(s) 1408
ScrFI CCNGG 2 cut(s) 84, 360
SduI GDGCHC 1 cut(s) 691
SexAI ACCWGGT 1 cut(s) 358
SfaNI GCATC 1 cut(s) 232
SfoI GGCGCC 1 cut(s) 464
SinI GGWCC 3 cut(s) 71, 631, 671
SmiMI CAYNNNNRTG 1 cut(s) 1458
SmlI CTYRAG 3 cut(s) 1295, 1477, 1497
SmoI CTYRAG 3 cut(s) 1295, 1477, 1497
SpeI ACTAGT 1 cut(s) 1547
SphI GCATGC 1 cut(s) 94
SsiI CCGC 3 cut(s) 11, 95, 1148
SspDI GGCGCC 1 cut(s) 462
SspI AATATT 2 cut(s) 546, 651
SspMI CTAG 7 cut(s) 723, 819, 1079, 1104, 1311, 1446, 1548
SstI GAGCTC 1 cut(s) 691
StyD4I CCNGG 2 cut(s) 82, 358
StyI CCWWGG 1 cut(s) 933
TaaI ACNGT 5 cut(s) 530, 838, 1409, 1460, 1487
TaiI ACGT 1 cut(s) 1239
TaqI TCGA 2 cut(s) 852, 984
TaqII GACCGA 1 cut(s) 750
TauI GCSGC 2 cut(s) 97, 1151
TfiI GAWTC 4 cut(s) 405, 748, 914, 1576
Tru1I TTAA 3 cut(s) 165, 284, 534
Tru9I TTAA 3 cut(s) 165, 284, 534
TscAI CASTG 3 cut(s) 164, 241, 1336
TseFI GTSAC 1 cut(s) 821
TseI GCWGC 1 cut(s) 866
Tsp45I GTSAC 1 cut(s) 821
TspGWI ACGGA 2 cut(s) 503, 916
TspRI CASTG 3 cut(s) 164, 241, 1336
VpaK11BI GGWCC 3 cut(s) 71, 631, 671
XapI RAATTY 6 cut(s) 470, 608, 1372, 1398, 1470, 1502
XceI RCATGY 1 cut(s) 94
XmiI GTMKAC 2 cut(s) 562, 1161
XspI CTAG 7 cut(s) 723, 819, 1079, 1104, 1311, 1446, 1548
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.