Rh7AG028000

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0000063
Physical Location & Seq
Reverse (-)
1871070 .. 1872867
1798 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG028000.1

Sequence Viewer

Length: 1566 bp
ATGTCAACAGCCGCACCTGAATTTGACTATAAGATGTCGTATGGGCGGCATCTTATGGCTACAGCATCATCTCATATGTCAGTGGAGAAGTGTTTTACCATGTTCTACACCCTCAAACACTTTAAAAACTTTCATGTTTGCTACACCAAATGGAAGGTAGCCTTTTTTGCAGACAACGAAGAATCAGATCAGTACTTGTCCGATGATGATTGGAAAGGAACCTGGGGTAGTTTTCTAATCTCAAGAGATTTGCACTACGGCCTAACACTTAGCCGTTATTCTAAGCCCGGGGTAGAAGTCTATCTTCCCAATTATTTTGCTCGTCAATTTGGATTCCTTCAGAGTTGTCCTATTCTTTTAAACAACTCATTGAATCATCTATGTTCATGGCGCCAAAAGCTCAGGACGCAGGATATGTGTGACTCAGTCTCACGACGTTACCAAGAACGTCTCAGCCGTTTCAAAATGGAGCCTTACCAAACGAGTTGCACGGCTACACCTCCTTTCGTTAATTGGTGGTCAGATTACTCAAAGAAATTCGTTGACCCAGATTTAAAGGAACTGTTCACACAGCGGATTGTCCAAGGAGTTGGTGATATCTTGAAGAGCCAAGATGGGAGGAAAAGAAAGCGGACTACGACTGATGGTCGCAAAGAAACTCCAACTTTAGCACAACAGAGTTCGTCTTTTTCTGAAGAATATTCTCTTGCGGGCTCGGATAACAATAGCGGCCATACTATTGAATTAACTATTGATGATGAGCAGGCTGAAACTTTTGCTAATGGTGAGGACCACGCTTTAATTGATGAATCAGTTCATTCTTTCCCTGACGATCGTGAGGCATACATGGAGGTGCAACATACAAGCGAGGCATTAAGTGTTCATAGAGAAACGACATTCATTCAACAAAATACTTTTAATCAAGCAAACTCTTCTAGACCCTTGTTGTCTGCAGAGGCCTTAGCCTTCTTAGACGAGCTTGCTATGCCACCAAAGATGACACCAAAACAGATTGGCAATGATCGGGAGAAGATAGCGGCCGAGTTTGTAACTGCATGTTGCCGCAAACCCCTTTTGACCGTGGTTGACAACAACCTTTATGACCGCTTCAAACAAGAAACAAAATTCTTGATTTCGGTCAATCATTTTAGTCCCGACCGTGTGCAACAAATTGAAGATCATCTCAAAGTTACAGATGTCAGTGTAGTTGCCTATACACATGCTTTGGAAAAATGGGACACTGGCCGCGCTCTAGAAAAGAAATATGGACCTATTGTGGATCGTCAATCTTCAAGGGCCGCGAAACTCACCCAACTCCATGATGAGTTCAACAAAGATGCACAAGAGTTAGCTGAGCTAGAGAGTCGAGTGAATGTGATCCGGGAGCGCATGTCCACAGCTTCAAACGCTATAAACCAAGAGTATAAAGAACATCATGAAGAGCTCAAGTTGTTTTCCATGCATGGTAGGGACACCCAAGCCTTTTTAGAAATCAAGCATGATCTTGATGAAGCAATGAAGAAGAATGACGCTGACTGGGCTGCATGGGAGAGGATCTTGCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

521

Amino Acids

60.31

Weight (kDa)

5.78

Isoelectric Point (pI)

41.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000063)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21382 FvH4_1g29794 FvH4_1g29795 FvH4_2g35573 FvH4_2g35574 FvH4_4g18552 FvH4_5g16044
malus_domestica MD05G1017000.v1.1
prunus_persica Prupe.3G140800_v2.0.a1 Prupe.6G164100_v2.0.a1
pyrus_communis pycom01g04330 pycom03g19820 pycom04g06720 pycom06g11360 pycom06g19000 pycom10g08100 pycom13g16660 pycom13g27590 pycom13g27640 pycom13g27890 pycom16g11770 pycom16g19530
rosa_chinensis RchiOBHm_Chr1g0317341 RchiOBHm_Chr1g0317351 RchiOBHm_Chr1g0320431 RchiOBHm_Chr1g0320711 RchiOBHm_Chr1g0320721 RchiOBHm_Chr1g0321611 RchiOBHm_Chr1g0321621 RchiOBHm_Chr1g0321631 RchiOBHm_Chr1g0323651 RchiOBHm_Chr1g0332991 RchiOBHm_Chr1g0333001 RchiOBHm_Chr1g0335981 RchiOBHm_Chr1g0335991 RchiOBHm_Chr1g0336001 RchiOBHm_Chr1g0350201 RchiOBHm_Chr1g0368201 RchiOBHm_Chr2g0105531 RchiOBHm_Chr2g0105541 RchiOBHm_Chr2g0116571 RchiOBHm_Chr2g0116581 RchiOBHm_Chr2g0121071 RchiOBHm_Chr2g0131351 RchiOBHm_Chr2g0131661 RchiOBHm_Chr2g0133021 RchiOBHm_Chr2g0138181 RchiOBHm_Chr2g0138191 RchiOBHm_Chr2g0142701 RchiOBHm_Chr2g0142711 RchiOBHm_Chr2g0152981 RchiOBHm_Chr3g0456181 RchiOBHm_Chr3g0456191 RchiOBHm_Chr3g0493631 RchiOBHm_Chr3g0496201 RchiOBHm_Chr4g0401541 RchiOBHm_Chr4g0410311 RchiOBHm_Chr4g0410321 RchiOBHm_Chr4g0419231 RchiOBHm_Chr4g0419511 RchiOBHm_Chr4g0419521 RchiOBHm_Chr5g0004311 RchiOBHm_Chr5g0004321 RchiOBHm_Chr5g0038131 RchiOBHm_Chr5g0038251 RchiOBHm_Chr5g0038261 RchiOBHm_Chr5g0038271 RchiOBHm_Chr5g0052241 RchiOBHm_Chr5g0053911 RchiOBHm_Chr5g0074641 RchiOBHm_Chr5g0076651 RchiOBHm_Chr5g0076661 RchiOBHm_Chr6g0249161 RchiOBHm_Chr6g0249171 RchiOBHm_Chr6g0250961 RchiOBHm_Chr6g0253701 RchiOBHm_Chr6g0262131 RchiOBHm_Chr6g0263181 RchiOBHm_Chr6g0263231 RchiOBHm_Chr6g0263241 RchiOBHm_Chr6g0263251 RchiOBHm_Chr6g0291271 RchiOBHm_Chr7g0194611 RchiOBHm_Chr7g0219691 RchiOBHm_Chr7g0219701 RchiOBHm_Chr7g0225431 RchiOBHm_Chr7g0234221 RchiOBHm_Chr7g0238711 RchiOBHm_Chr7g0238721 RchiOBHm_Chr7g0238731 RchiOBHm_Chr7g0239611 RchiOBHm_Chr7g0239621
rosa_laevigata RLG00000001361 RLG00000001376 RLG00000001860 RLG00000002051 RLG00000002362 RLG00000008940 RLG00000012764 RLG00000018782 RLG00000029639 RLG00000030151
rosa_multiflora Rmu_co8090794.1_g000001 Rmu_co8135356.1_g000001 Rmu_co8224968.1_g000001 Rmu_sc0000016.1_g000020 Rmu_sc0000029.1_g000061 Rmu_sc0000035.1_g000032 Rmu_sc0000060.1_g000041 Rmu_sc0000148.1_g000041 Rmu_sc0000315.1_g000084 Rmu_sc0000527.1_g000005 Rmu_sc0000527.1_g000007 Rmu_sc0000527.1_g000008 Rmu_sc0000648.1_g000002 Rmu_sc0000762.1_g000076 Rmu_sc0000870.1_g000003 Rmu_sc0000870.1_g000004 Rmu_sc0000948.1_g000037 Rmu_sc0000997.1_g000003 Rmu_sc0001047.1_g000041 Rmu_sc0001047.1_g000042 Rmu_sc0001075.1_g000044 Rmu_sc0001174.1_g000006 Rmu_sc0001235.1_g000025 Rmu_sc0001292.1_g000008 Rmu_sc0001301.1_g000038 Rmu_sc0001461.1_g000069 Rmu_sc0001461.1_g000070 Rmu_sc0001669.1_g000041 Rmu_sc0001689.1_g000027 Rmu_sc0001896.1_g000008 Rmu_sc0001909.1_g000013 Rmu_sc0002170.1_g000038 Rmu_sc0002200.1_g000014 Rmu_sc0002283.1_g000027 Rmu_sc0002284.1_g000014 Rmu_sc0002294.1_g000017 Rmu_sc0002294.1_g000018 Rmu_sc0002307.1_g000020 Rmu_sc0002307.1_g000021 Rmu_sc0002307.1_g000023 Rmu_sc0002357.1_g000054 Rmu_sc0002409.1_g000005 Rmu_sc0002535.1_g000002 Rmu_sc0002589.1_g000014 Rmu_sc0002759.1_g000016 Rmu_sc0002759.1_g000017 Rmu_sc0002777.1_g000015 Rmu_sc0002824.1_g000016 Rmu_sc0002872.1_g000005 Rmu_sc0002872.1_g000012 Rmu_sc0002872.1_g000013 Rmu_sc0002942.1_g000019 Rmu_sc0003337.1_g000001 Rmu_sc0003410.1_g000052 Rmu_sc0003445.1_g000010 Rmu_sc0003773.1_g000007 Rmu_sc0003773.1_g000008 Rmu_sc0003895.1_g000002 Rmu_sc0004063.1_g000006 Rmu_sc0004088.1_g000009 Rmu_sc0004088.1_g000010 Rmu_sc0004174.1_g000027 Rmu_sc0004196.1_g000010 Rmu_sc0004515.1_g000006 Rmu_sc0004727.1_g000010 Rmu_sc0004755.1_g000018 Rmu_sc0005016.1_g000030 Rmu_sc0005026.1_g000001 Rmu_sc0005044.1_g000007 Rmu_sc0005284.1_g000001 Rmu_sc0005431.1_g000030 Rmu_sc0005802.1_g000014 Rmu_sc0005802.1_g000015 Rmu_sc0005994.1_g000004 Rmu_sc0005994.1_g000005 Rmu_sc0006059.1_g000048 Rmu_sc0006583.1_g000013 Rmu_sc0006824.1_g000009 Rmu_sc0007458.1_g000005 Rmu_sc0007707.1_g000002 Rmu_sc0008242.1_g000012 Rmu_sc0008713.1_g000006 Rmu_sc0008770.1_g000008 Rmu_sc0009785.1_g000004 Rmu_sc0009785.1_g000005 Rmu_sc0010125.1_g000001 Rmu_sc0010211.1_g000004 Rmu_sc0011034.1_g000001 Rmu_sc0011833.1_g000006 Rmu_sc0014851.1_g000001 Rmu_sc0014899.1_g000001 Rmu_sc0015060.1_g000003 Rmu_sc0015186.1_g000001 Rmu_sc0015248.1_g000003 Rmu_sc0015248.1_g000004 Rmu_sc0015314.1_g000001 Rmu_sc0018098.1_g000002 Rmu_sc0022706.1_g000004 Rmu_sc0023350.1_g000002 Rmu_sc0027636.1_g000001 Rmu_sc0027672.1_g000003 Rmu_sc0030879.1_g000001 Rmu_ssc0000008.1_g000029 Rmu_ssc0000019.1_g000014 Rmu_ssc0000050.1_g000082 Rmu_ssc0000282.1_g000004 Rmu_ssc0000311.1_g000010
rosa_roxburghii Rroxscaffold_1G00015190 Rroxscaffold_1G00031880 Rroxscaffold_1G00031890 Rroxscaffold_1G00059310 Rroxscaffold_1G00060420 Rroxscaffold_1G00067930 Rroxscaffold_1G00075030 Rroxscaffold_2G00082210 Rroxscaffold_2G00122970 Rroxscaffold_3G00218230 Rroxscaffold_3G00219020 Rroxscaffold_3G00219030 Rroxscaffold_3G00223680 Rroxscaffold_3G00223690 Rroxscaffold_3G00223700 Rroxscaffold_3G00226870 Rroxscaffold_3G00226880 Rroxscaffold_3G00232990 Rroxscaffold_3G00265610 Rroxscaffold_3G00265620 Rroxscaffold_3G00265630 Rroxscaffold_4G00318660 Rroxscaffold_4G00319060 Rroxscaffold_4G00323500 Rroxscaffold_5G00357520 Rroxscaffold_5G00366150 Rroxscaffold_5G00377470 Rroxscaffold_6G00395700 Rroxscaffold_6G00413950 Rroxscaffold_7G00187650 Rroxscaffold_7G00198290 Rroxscaffold_7G00198300 Rroxscaffold_7G00208060
rosa_rugosa Rorug01G0173900 Rorug01G0174000 Rorug01G0174100 Rorug01G0174100 Rorug02G0341200 Rorug04G0135700 Rorug04G0135800 Rorug05G0032500 Rorug06G0021800
rosa_samantha Rh1AG036600 Rh1AG245800 Rh1CG021700 Rh1CG021800 Rh1CG085800 Rh1CG085900 Rh1CG187900 Rh1CG229600 Rh1CG239600 Rh1CG246500 Rh1CG246600 Rh2BG478100 Rh2DG341300 Rh2DG366600 Rh2DG375700 Rh2DG384300 Rh2DG487000 Rh2DG504000 Rh2DG504100 Rh3AG311800 Rh3AG327500 Rh3AG328300 Rh3BG345100 Rh3CG320100 Rh4AG005700 Rh4AG067900 Rh4AG068000 Rh4AG084400 Rh4AG106700 Rh4AG160000 Rh4AG173900 Rh4AG174000 Rh4CG125300 Rh4CG125500 Rh4CG264500 Rh4DG110800 Rh5AG047300 Rh5AG085200 Rh5AG126300 Rh5AG127300 Rh5AG203000 Rh5AG332400 Rh5AG332500 Rh5AG342400 Rh5AG344100 Rh5AG375600 Rh5AG378300 Rh5AG386000 Rh5AG529600 Rh5BG125200 Rh5CG137600 Rh5CG137700 Rh5DG125200 Rh6BG134100 Rh6BG175400 Rh6BG179500 Rh6BG179600 Rh6BG181600 Rh6BG181700 Rh6BG191100 Rh6BG232900 Rh6BG259700 Rh6BG259800 Rh7AG028000 Rh7AG319400 Rh7AG352700 Rh7AG352800 Rh7AG352900 Rh7AG482500 Rh7AG482600 Rh7AG503800 Rh7BG334700 Rh7CG200100 Rh7CG336200 Rh7CG370200 Rh7CG370400 Rh7CG370500
rosa_wichuraiana Rw1G001580 Rw1G003570 Rw1G004260 Rw1G004270 Rw1G021170 Rw2G019390 Rw2G040280 Rw2G044050 Rw4G004430 Rw5G010950 Rw5G018350 Rw5G032890 Rw6G002840 Rw6G006510 Rw6G007780 Rw6G033790 Rw7G036320 Rw7G040550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 390
AccII CGCG 2 cut(s) 1248, 1301
AclWI GGATC 3 cut(s) 1287, 1372, 1562
AcoI YGGCCR 3 cut(s) 730, 1038, 1243
AcsI RAATTY 3 cut(s) 20, 536, 1124
AcuI CTGAAG 2 cut(s) 323, 714
AcyI GRCGYC 1 cut(s) 391
AfaI GTAC 1 cut(s) 194
AhdI GACNNNNNGTC 1 cut(s) 645
AjnI CCWGG 1 cut(s) 221
AluBI AGCT 6 cut(s) 400, 979, 1352, 1357, 1400, 1444
AluI AGCT 6 cut(s) 400, 979, 1352, 1357, 1400, 1444
Alw21I GWGCWC 1 cut(s) 1446
Alw26I GTCTC 2 cut(s) 433, 455
AlwI GGATC 3 cut(s) 1287, 1372, 1562
Ama87I CYCGRG 1 cut(s) 287
AoxI GGCC 6 cut(s) 259, 730, 957, 1038, 1243, 1296
ApeKI GCWGC 1 cut(s) 1541
ApoI RAATTY 3 cut(s) 20, 536, 1124
Asp700I GAANNNNTTC 1 cut(s) 813
AspLEI GCGC 3 cut(s) 393, 1250, 1389
AspS9I GGNCC 3 cut(s) 790, 1268, 1296
AsuC2I CCSGG 3 cut(s) 288, 289, 1382
AsuHPI GGTGA 3 cut(s) 605, 797, 1300
AvaI CYCGRG 1 cut(s) 287
AvaII GGWCC 2 cut(s) 790, 1268
BanI GGYRCC 1 cut(s) 390
BanII GRGCYC 2 cut(s) 716, 1446
Bbv12I GWGCWC 1 cut(s) 1446
BbvI GCAGC 1 cut(s) 1528
BccI CCATC 2 cut(s) 608, 638
BceAI ACGGC 4 cut(s) 258, 274, 441, 507
BciT130I CCWGG 1 cut(s) 223
BcnI CCSGG 3 cut(s) 288, 289, 1382
BcoDI GTCTC 2 cut(s) 433, 455
BfaI CTAG 3 cut(s) 936, 1253, 1358
BfmI CTRYAG 2 cut(s) 60, 951
BfoI RGCGCY 1 cut(s) 394
BisI GCNGC 8 cut(s) 12, 47, 730, 1038, 1063, 1246, 1299, 1542
BlpI GCTNAGC 1 cut(s) 1353
BlsI GCNGC 8 cut(s) 13, 48, 731, 1039, 1064, 1247, 1300, 1543
BmcAI AGTACT 1 cut(s) 194
Bme1390I CCNGG 4 cut(s) 223, 288, 289, 1382
Bme18I GGWCC 2 cut(s) 790, 1268
BmeRI GACNNNNNGTC 1 cut(s) 645
BmeT110I CYCGRG 1 cut(s) 287
BmgT120I GGNCC 3 cut(s) 790, 1268, 1296
BmiI GGNNCC 3 cut(s) 220, 392, 471
BmrFI CCNGG 4 cut(s) 223, 288, 289, 1382
BmrI ACTGGG 1 cut(s) 1546
BmsI GCATC 3 cut(s) 58, 74, 1327
BmuI ACTGGG 1 cut(s) 1546
Bpu10I CCTNAGC 2 cut(s) 401, 961
Bpu1102I GCTNAGC 1 cut(s) 1353
BpuEI CTTGAG 2 cut(s) 226, 1430
BpuMI CCSGG 3 cut(s) 288, 289, 1382
BsaHI GRCGYC 1 cut(s) 391
BsaJI CCNNGG 5 cut(s) 222, 287, 288, 583, 1080
BsaXI ACNNNNNCTCC 2 cut(s) 1376, 1406
Bse1I ACTGG 2 cut(s) 1246, 1541
Bse3DI GCAATG 2 cut(s) 1024, 1521
BseBI CCWGG 1 cut(s) 223
BseDI CCNNGG 5 cut(s) 222, 287, 288, 583, 1080
BseMI GCAATG 2 cut(s) 1024, 1521
BseMII CTCAG 4 cut(s) 415, 438, 466, 1344
BseNI ACTGG 2 cut(s) 1246, 1541
BseX3I CGGCCG 1 cut(s) 1038
BseXI GCAGC 1 cut(s) 1528
Bsh1236I CGCG 2 cut(s) 1248, 1301
Bsh1285I CGRYCG 3 cut(s) 835, 1041, 1159
BshFI GGCC 6 cut(s) 261, 732, 959, 1040, 1245, 1298
BshNI GGYRCC 1 cut(s) 390
BsiEI CGRYCG 3 cut(s) 835, 1041, 1159
BsiHKAI GWGCWC 1 cut(s) 1446
BsiHKCI CYCGRG 1 cut(s) 287
BsiSI CCGG 2 cut(s) 288, 1381
BslFI GGGAC 3 cut(s) 1137, 1250, 1484
BsmAI GTCTC 2 cut(s) 433, 455
BsmBI CGTCTC 1 cut(s) 455
BsmFI GGGAC 3 cut(s) 1137, 1250, 1484
BsnI GGCC 6 cut(s) 261, 732, 959, 1040, 1245, 1298
BsoBI CYCGRG 1 cut(s) 287
Bsp1286I GDGCHC 2 cut(s) 716, 1446
Bsp143I GATC 8 cut(s) 187, 832, 1021, 1177, 1279, 1377, 1501, 1554
Bsp1720I GCTNAGC 1 cut(s) 1353
BspANI GGCC 6 cut(s) 261, 732, 959, 1040, 1245, 1298
BspCNI CTCAG 4 cut(s) 414, 437, 465, 1345
BspFNI CGCG 2 cut(s) 1248, 1301
BspHI TCATGA 1 cut(s) 1435
BspLI GGNNCC 3 cut(s) 220, 392, 471
BspMAI CTGCAG 1 cut(s) 955
BspPI GGATC 3 cut(s) 1287, 1372, 1562
BspQI GCTCTTC 2 cut(s) 599, 1434
BspT107I GGYRCC 1 cut(s) 390
BsrDI GCAATG 2 cut(s) 1024, 1521
BsrI ACTGG 2 cut(s) 1246, 1541
BssECI CCNNGG 5 cut(s) 222, 287, 288, 583, 1080
BssMI GATC 8 cut(s) 187, 832, 1021, 1177, 1279, 1377, 1501, 1554
BssNI GRCGYC 1 cut(s) 391
BssT1I CCWWGG 1 cut(s) 583
Bst2UI CCWGG 1 cut(s) 223
Bst4CI ACNGT 3 cut(s) 564, 1081, 1160
Bst6I CTCTTC 3 cut(s) 599, 937, 1434
BstACI GRCGYC 1 cut(s) 391
BstC8I GCNNGC 3 cut(s) 712, 765, 981
BstDEI CTNAG 8 cut(s) 269, 282, 401, 424, 452, 961, 970, 1353
BstDSI CCRYGG 1 cut(s) 1080
BstFNI CGCG 2 cut(s) 1248, 1301
BstH2I RGCGCY 1 cut(s) 394
BstHHI GCGC 3 cut(s) 393, 1250, 1389
BstKTI GATC 8 cut(s) 190, 835, 1024, 1180, 1282, 1380, 1504, 1557
BstMAI GTCTC 2 cut(s) 433, 455
BstMBI GATC 8 cut(s) 187, 832, 1021, 1177, 1279, 1377, 1501, 1554
BstMCI CGRYCG 3 cut(s) 835, 1041, 1159
BstMWI GCNNNNNNNGC 6 cut(s) 167, 397, 406, 985, 1406, 1538
BstNI CCWGG 1 cut(s) 223
BstNSI RCATGY 3 cut(s) 1059, 1223, 1393
BstSCI CCNGG 4 cut(s) 221, 286, 287, 1380
BstSFI CTRYAG 2 cut(s) 60, 951
BstUI CGCG 2 cut(s) 1248, 1301
BstV1I GCAGC 1 cut(s) 1528
BstX2I RGATCY 1 cut(s) 1554
BstXI CCANNNNNNTGG 1 cut(s) 590
BstYI RGATCY 1 cut(s) 1554
BstZI CGGCCG 1 cut(s) 1038
BsuRI GGCC 6 cut(s) 261, 732, 959, 1040, 1245, 1298
BtgI CCRYGG 1 cut(s) 1080
BtsIMutI CAGTG 3 cut(s) 87, 1207, 1239
Cac8I GCNNGC 3 cut(s) 712, 765, 981
CciI TCATGA 1 cut(s) 1435
CfoI GCGC 3 cut(s) 393, 1250, 1389
Cfr13I GGNCC 3 cut(s) 790, 1268, 1296
Cfr9I CCCGGG 1 cut(s) 287
CseI GACGC 2 cut(s) 415, 1538
Csp6I GTAC 1 cut(s) 193
CviQI GTAC 1 cut(s) 193
DdeI CTNAG 8 cut(s) 269, 282, 401, 424, 452, 961, 970, 1353
DinI GGCGCC 1 cut(s) 392
DpnI GATC 8 cut(s) 189, 834, 1023, 1179, 1281, 1379, 1503, 1556
DpnII GATC 8 cut(s) 187, 832, 1021, 1177, 1279, 1377, 1501, 1554
DraI TTTAAA 3 cut(s) 124, 360, 555
DriI GACNNNNNGTC 1 cut(s) 645
EaeI YGGCCR 3 cut(s) 730, 1038, 1243
EagI CGGCCG 1 cut(s) 1038
Eam1104I CTCTTC 3 cut(s) 599, 937, 1434
Eam1105I GACNNNNNGTC 1 cut(s) 645
EarI CTCTTC 3 cut(s) 599, 937, 1434
Ecl136II GAGCTC 1 cut(s) 1444
EclXI CGGCCG 1 cut(s) 1038
Eco130I CCWWGG 1 cut(s) 583
Eco147I AGGCCT 1 cut(s) 959
Eco24I GRGCYC 2 cut(s) 716, 1446
Eco32I GATATC 1 cut(s) 598
Eco47I GGWCC 2 cut(s) 790, 1268
Eco52I CGGCCG 1 cut(s) 1038
Eco53kI GAGCTC 1 cut(s) 1444
Eco57I CTGAAG 2 cut(s) 323, 714
Eco88I CYCGRG 1 cut(s) 287
EcoICRI GAGCTC 1 cut(s) 1444
EcoRII CCWGG 1 cut(s) 221
EcoRV GATATC 1 cut(s) 598
EcoT14I CCWWGG 1 cut(s) 583
EcoT22I ATGCAT 1 cut(s) 1464
EcoT38I GRGCYC 2 cut(s) 716, 1446
EgeI GGCGCC 1 cut(s) 392
EheI GGCGCC 1 cut(s) 392
ErhI CCWWGG 1 cut(s) 583
Esp3I CGTCTC 1 cut(s) 455
FalI AAGNNNNNCTT 4 cut(s) 146, 178, 288, 320
FaqI GGGAC 3 cut(s) 1137, 1250, 1484
FauI CCCGC 1 cut(s) 703
FauNDI CATATG 1 cut(s) 75
Fnu4HI GCNGC 8 cut(s) 12, 47, 730, 1038, 1063, 1246, 1299, 1542
FriOI GRGCYC 2 cut(s) 716, 1446
Fsp4HI GCNGC 8 cut(s) 12, 47, 730, 1038, 1063, 1246, 1299, 1542
FspBI CTAG 3 cut(s) 936, 1253, 1358
GlaI GCGC 3 cut(s) 392, 1249, 1388
GluI GCNGC 8 cut(s) 12, 47, 730, 1038, 1063, 1246, 1299, 1542
HaeII RGCGCY 1 cut(s) 394
HaeIII GGCC 6 cut(s) 261, 732, 959, 1040, 1245, 1298
HapII CCGG 2 cut(s) 288, 1381
HgaI GACGC 2 cut(s) 415, 1538
HhaI GCGC 3 cut(s) 393, 1250, 1389
Hin1I GRCGYC 1 cut(s) 391
Hin6I GCGC 3 cut(s) 391, 1248, 1387
HinP1I GCGC 3 cut(s) 391, 1248, 1387
HincII GTYRAC 3 cut(s) 6, 544, 1087
HindII GTYRAC 3 cut(s) 6, 544, 1087
HinfI GANTC 6 cut(s) 182, 333, 373, 422, 809, 1363
HpaII CCGG 2 cut(s) 288, 1381
HphI GGTGA 3 cut(s) 605, 797, 1300
Hpy166II GTNNAC 5 cut(s) 6, 544, 567, 1087, 1395
Hpy188I TCNGA 6 cut(s) 187, 202, 342, 523, 694, 718
Hpy8I GTNNAC 5 cut(s) 6, 544, 567, 1087, 1395
Hpy99I CGWCG 1 cut(s) 438
HpyAV CCTTC 3 cut(s) 148, 347, 976
HpyCH4III ACNGT 3 cut(s) 564, 1081, 1160
HpyCH4IV ACGT 2 cut(s) 436, 448
HpyF10VI GCNNNNNNNGC 6 cut(s) 167, 397, 406, 985, 1406, 1538
HpyF3I CTNAG 8 cut(s) 269, 282, 401, 424, 452, 961, 970, 1353
HpySE526I ACGT 2 cut(s) 436, 448
Hsp92I GRCGYC 1 cut(s) 391
HspAI GCGC 3 cut(s) 391, 1248, 1387
KasI GGCGCC 1 cut(s) 390
Kzo9I GATC 8 cut(s) 187, 832, 1021, 1177, 1279, 1377, 1501, 1554
LguI GCTCTTC 2 cut(s) 599, 1434
LmnI GCTCC 2 cut(s) 469, 1384
Lsp1109I GCAGC 1 cut(s) 1528
LweI GCATC 3 cut(s) 58, 74, 1327
MaeI CTAG 3 cut(s) 936, 1253, 1358
MaeII ACGT 2 cut(s) 436, 448
MaeIII GTNAC 4 cut(s) 419, 437, 1048, 1189
MalI GATC 8 cut(s) 189, 834, 1023, 1179, 1281, 1379, 1503, 1556
MboI GATC 8 cut(s) 187, 832, 1021, 1177, 1279, 1377, 1501, 1554
MflI RGATCY 1 cut(s) 1554
MhlI GDGCHC 2 cut(s) 716, 1446
MluCI AATT 9 cut(s) 20, 310, 326, 511, 536, 743, 801, 1124, 1170
Mly113I GGCGCC 1 cut(s) 391
MlyI GAGTC 2 cut(s) 416, 1372
MmeI TCCRAC 1 cut(s) 686
MnlI CCTC 9 cut(s) 122, 510, 612, 781, 832, 844, 862, 949, 1545
Mph1103I ATGCAT 1 cut(s) 1464
MroXI GAANNNNTTC 1 cut(s) 813
MseI TTAA 8 cut(s) 123, 359, 510, 554, 746, 800, 875, 918
MslI CAYNNNNRTG 1 cut(s) 851
MspA1I CMGCKG 1 cut(s) 574
MspI CCGG 2 cut(s) 288, 1381
MspR9I CCNGG 4 cut(s) 223, 288, 289, 1382
MvaI CCWGG 1 cut(s) 223
MvnI CGCG 2 cut(s) 1248, 1301
MwoI GCNNNNNNNGC 6 cut(s) 167, 397, 406, 985, 1406, 1538
NarI GGCGCC 1 cut(s) 391
NciI CCSGG 3 cut(s) 288, 289, 1382
NdeI CATATG 1 cut(s) 75
NdeII GATC 8 cut(s) 187, 832, 1021, 1177, 1279, 1377, 1501, 1554
NlaIV GGNNCC 3 cut(s) 220, 392, 471
NmeAIII GCCGAG 1 cut(s) 1066
NmuCI GTSAC 1 cut(s) 419
NsiI ATGCAT 1 cut(s) 1464
NspI RCATGY 3 cut(s) 1059, 1223, 1393
PagI TCATGA 1 cut(s) 1435
PceI AGGCCT 1 cut(s) 959
PciSI GCTCTTC 2 cut(s) 599, 1434
PcsI WCGNNNNNNNCGW 1 cut(s) 454
PdmI GAANNNNTTC 1 cut(s) 813
PfeI GAWTC 4 cut(s) 182, 333, 373, 809
PflFI GACNNNGTC 1 cut(s) 425
PfoI TCCNGGA 1 cut(s) 1380
PkrI GCNGC 8 cut(s) 13, 48, 731, 1039, 1064, 1247, 1300, 1543
Ple19I CGATCG 1 cut(s) 835
PleI GAGTC 2 cut(s) 416, 1371
PluTI GGCGCC 1 cut(s) 394
PpsI GAGTC 2 cut(s) 416, 1371
Psp124BI GAGCTC 1 cut(s) 1446
Psp6I CCWGG 1 cut(s) 221
PspGI CCWGG 1 cut(s) 221
PspN4I GGNNCC 3 cut(s) 220, 392, 471
PspPI GGNCC 3 cut(s) 790, 1268, 1296
PstI CTGCAG 1 cut(s) 955
PsuI RGATCY 1 cut(s) 1554
PsyI GACNNNGTC 1 cut(s) 425
PvuI CGATCG 1 cut(s) 835
RsaI GTAC 1 cut(s) 194
RsaNI GTAC 1 cut(s) 193
RseI CAYNNNNRTG 1 cut(s) 851
SacI GAGCTC 1 cut(s) 1446
SapI GCTCTTC 2 cut(s) 599, 1434
SaqAI TTAA 8 cut(s) 123, 359, 510, 554, 746, 800, 875, 918
SatI GCNGC 8 cut(s) 12, 47, 730, 1038, 1063, 1246, 1299, 1542
Sau3AI GATC 8 cut(s) 187, 832, 1021, 1177, 1279, 1377, 1501, 1554
Sau96I GGNCC 3 cut(s) 790, 1268, 1296
ScaI AGTACT 1 cut(s) 194
SchI GAGTC 2 cut(s) 416, 1372
ScrFI CCNGG 4 cut(s) 223, 288, 289, 1382
SduI GDGCHC 2 cut(s) 716, 1446
SfaNI GCATC 3 cut(s) 58, 74, 1327
SfcI CTRYAG 2 cut(s) 60, 951
SfoI GGCGCC 1 cut(s) 392
SinI GGWCC 2 cut(s) 790, 1268
SmaI CCCGGG 1 cut(s) 289
SmiMI CAYNNNNRTG 1 cut(s) 851
SmlI CTYRAG 2 cut(s) 241, 1445
SmoI CTYRAG 2 cut(s) 241, 1445
Sse9I AATT 9 cut(s) 20, 310, 326, 511, 536, 743, 801, 1124, 1170
SseBI AGGCCT 1 cut(s) 959
SspDI GGCGCC 1 cut(s) 390
SspI AATATT 1 cut(s) 701
SspMI CTAG 3 cut(s) 936, 1253, 1358
SstI GAGCTC 1 cut(s) 1446
StuI AGGCCT 1 cut(s) 959
StyD4I CCNGG 4 cut(s) 221, 286, 287, 1380
StyI CCWWGG 1 cut(s) 583
TaaI ACNGT 3 cut(s) 564, 1081, 1160
TaiI ACGT 2 cut(s) 439, 451
TaqI TCGA 1 cut(s) 1366
TaqII GACCGA 1 cut(s) 1126
TasI AATT 9 cut(s) 20, 310, 326, 511, 536, 743, 801, 1124, 1170
TatI WGTACW 1 cut(s) 192
TauI GCSGC 7 cut(s) 14, 49, 732, 1040, 1065, 1248, 1301
TfiI GAWTC 4 cut(s) 182, 333, 373, 809
Tru1I TTAA 8 cut(s) 123, 359, 510, 554, 746, 800, 875, 918
Tru9I TTAA 8 cut(s) 123, 359, 510, 554, 746, 800, 875, 918
TscAI CASTG 3 cut(s) 87, 1207, 1246
TseFI GTSAC 1 cut(s) 419
TseI GCWGC 1 cut(s) 1541
Tsp45I GTSAC 1 cut(s) 419
TspDTI ATGAA 9 cut(s) 122, 375, 806, 822, 872, 889, 1452, 1524, 1532
TspMI CCCGGG 1 cut(s) 287
TspRI CASTG 3 cut(s) 87, 1207, 1246
Tth111I GACNNNGTC 1 cut(s) 425
VpaK11BI GGWCC 2 cut(s) 790, 1268
XapI RAATTY 3 cut(s) 20, 536, 1124
XbaI TCTAGA 2 cut(s) 935, 1252
XceI RCATGY 3 cut(s) 1059, 1223, 1393
XmaI CCCGGG 1 cut(s) 287
XmnI GAANNNNTTC 1 cut(s) 813
XspI CTAG 3 cut(s) 936, 1253, 1358
ZrmI AGTACT 1 cut(s) 194
Zsp2I ATGCAT 1 cut(s) 1464
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.