Rmu_sc0001047.1_g000042

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001047.1
OG0000063
Physical Location & Seq
Forward (+)
203645 .. 206972
3328 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001047.1_g000042.1.cds

Sequence Viewer

Length: 1848 bp
atgtcaagaaaccacttctcgtcatggagagatgggttcacacaaacttctcagggttcggccgttggtaactactatgaagagcaatttggcaagtttgagaggtccggcctaaagcgtcgttgtcctgatcatagagccaccccacacttccaagcttggtgctcgacttttatcatgaaaaatcttggaaaggacttggctgggacccaacgtgctgcattacaaggacttccgaacttgctaggccccaaggaaggtaatggtaagaagaaagcacaggatggcaagttaaaatcaaccaaaggatcctctaaacaaggacaaacatcgaagaaatgtggctcaacattggggtatactcggaacgccaagaaatcaaagaaatcatcggatgtggtggagaatttggtcacaaacccgacggacactatggttagtgaggacatattttttgaggctaatatggatgatggccacgatgctttggctgaaaaccgaaatacttctgaaattgaggctatggccgaaactggtgacgcctcgatccatagcgcggactcggctgatagcgaaggttattcagaagaagttcaatcagaaagtggcgatcaagagagagatggccgcattgatcattctttgcccccacttgaaaactccatgattgaggttgacatggacgacttgggtgagagccaactgcacaacacatcgagcatcggccaacagcttgccaaatcaaacaacttttccgaggatgttgaaaacacagatgcacgtggccgagaaacactacttatccatcagacattggttcaggtgggagaatctcgaagcagtacaaccctagaattggctcttctcaaccaaactgaaccacatcctcctatgttcgaaacacttacctctcctcctcatgacaggatgtgtcaaagtgagcaagctatcgtttgcgctccatcttcggccgagcttgtggtgagtgccctggatcatacagcggatgatcttggtttggacatacttcaattcctaaatactctagacaacagcacgagtcccgaagaggaaaaacttgaaacagccgaaaccaaaaaggcacttgagactgtcagacagtttttgggttgtgatgtgagaacagtgaccgaggctagttttctctctttgaaggaagcggttgaagtacttatttcagccaaacatttctctcaggtagaggcttatgaagttcatgctcatttggctgttgtaaattttagtctctctccttgtctaaaagcacaaaaagagtttgaagcaggcgagaagctgaaaagtgagtacgatgacattcgccagtccaccgatcttggccaactccagaagttgaagacttctttggacgaaggaaggcaaaaagtgctcgatctgaggaagcagttggccgaagctgaaaagcaagtcaaagtcacttcggccgccatccgaaacattgttccccaacaggaactcaccaagtatagcttgattctgtcatcggtcaagtcgtataacaagaagaggggcatcttgaagcgaaaggtcgaccaagctcggctgaaactcttgttcacctcggccgagattacctcacttcggccaagattacctcagtcgtctcggccatcattacttgacttcggccaacacaattatggttggttcggccgatacctcaacattttaactttggccaacgaaaaactcaacattttagccaaccaaatcaacaactcgagcttggctgaagctcttgttcacctcggccgagattacctcacttcggccaagattacctcagtcgtctcggccaacattacttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

615

Amino Acids

67.99

Weight (kDa)

5.69

Isoelectric Point (pI)

42.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000063)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21382 FvH4_1g29794 FvH4_1g29795 FvH4_2g35573 FvH4_2g35574 FvH4_4g18552 FvH4_5g16044
malus_domestica MD05G1017000.v1.1
prunus_persica Prupe.3G140800_v2.0.a1 Prupe.6G164100_v2.0.a1
pyrus_communis pycom01g04330 pycom03g19820 pycom04g06720 pycom06g11360 pycom06g19000 pycom10g08100 pycom13g16660 pycom13g27590 pycom13g27640 pycom13g27890 pycom16g11770 pycom16g19530
rosa_chinensis RchiOBHm_Chr1g0317341 RchiOBHm_Chr1g0317351 RchiOBHm_Chr1g0320431 RchiOBHm_Chr1g0320711 RchiOBHm_Chr1g0320721 RchiOBHm_Chr1g0321611 RchiOBHm_Chr1g0321621 RchiOBHm_Chr1g0321631 RchiOBHm_Chr1g0323651 RchiOBHm_Chr1g0332991 RchiOBHm_Chr1g0333001 RchiOBHm_Chr1g0335981 RchiOBHm_Chr1g0335991 RchiOBHm_Chr1g0336001 RchiOBHm_Chr1g0350201 RchiOBHm_Chr1g0368201 RchiOBHm_Chr2g0105531 RchiOBHm_Chr2g0105541 RchiOBHm_Chr2g0116571 RchiOBHm_Chr2g0116581 RchiOBHm_Chr2g0121071 RchiOBHm_Chr2g0131351 RchiOBHm_Chr2g0131661 RchiOBHm_Chr2g0133021 RchiOBHm_Chr2g0138181 RchiOBHm_Chr2g0138191 RchiOBHm_Chr2g0142701 RchiOBHm_Chr2g0142711 RchiOBHm_Chr2g0152981 RchiOBHm_Chr3g0456181 RchiOBHm_Chr3g0456191 RchiOBHm_Chr3g0493631 RchiOBHm_Chr3g0496201 RchiOBHm_Chr4g0401541 RchiOBHm_Chr4g0410311 RchiOBHm_Chr4g0410321 RchiOBHm_Chr4g0419231 RchiOBHm_Chr4g0419511 RchiOBHm_Chr4g0419521 RchiOBHm_Chr5g0004311 RchiOBHm_Chr5g0004321 RchiOBHm_Chr5g0038131 RchiOBHm_Chr5g0038251 RchiOBHm_Chr5g0038261 RchiOBHm_Chr5g0038271 RchiOBHm_Chr5g0052241 RchiOBHm_Chr5g0053911 RchiOBHm_Chr5g0074641 RchiOBHm_Chr5g0076651 RchiOBHm_Chr5g0076661 RchiOBHm_Chr6g0249161 RchiOBHm_Chr6g0249171 RchiOBHm_Chr6g0250961 RchiOBHm_Chr6g0253701 RchiOBHm_Chr6g0262131 RchiOBHm_Chr6g0263181 RchiOBHm_Chr6g0263231 RchiOBHm_Chr6g0263241 RchiOBHm_Chr6g0263251 RchiOBHm_Chr6g0291271 RchiOBHm_Chr7g0194611 RchiOBHm_Chr7g0219691 RchiOBHm_Chr7g0219701 RchiOBHm_Chr7g0225431 RchiOBHm_Chr7g0234221 RchiOBHm_Chr7g0238711 RchiOBHm_Chr7g0238721 RchiOBHm_Chr7g0238731 RchiOBHm_Chr7g0239611 RchiOBHm_Chr7g0239621
rosa_laevigata RLG00000001361 RLG00000001376 RLG00000001860 RLG00000002051 RLG00000002362 RLG00000008940 RLG00000012764 RLG00000018782 RLG00000029639 RLG00000030151
rosa_multiflora Rmu_co8090794.1_g000001 Rmu_co8135356.1_g000001 Rmu_co8224968.1_g000001 Rmu_sc0000016.1_g000020 Rmu_sc0000029.1_g000061 Rmu_sc0000035.1_g000032 Rmu_sc0000060.1_g000041 Rmu_sc0000148.1_g000041 Rmu_sc0000315.1_g000084 Rmu_sc0000527.1_g000005 Rmu_sc0000527.1_g000007 Rmu_sc0000527.1_g000008 Rmu_sc0000648.1_g000002 Rmu_sc0000762.1_g000076 Rmu_sc0000870.1_g000003 Rmu_sc0000870.1_g000004 Rmu_sc0000948.1_g000037 Rmu_sc0000997.1_g000003 Rmu_sc0001047.1_g000041 Rmu_sc0001047.1_g000042 Rmu_sc0001075.1_g000044 Rmu_sc0001174.1_g000006 Rmu_sc0001235.1_g000025 Rmu_sc0001292.1_g000008 Rmu_sc0001301.1_g000038 Rmu_sc0001461.1_g000069 Rmu_sc0001461.1_g000070 Rmu_sc0001669.1_g000041 Rmu_sc0001689.1_g000027 Rmu_sc0001896.1_g000008 Rmu_sc0001909.1_g000013 Rmu_sc0002170.1_g000038 Rmu_sc0002200.1_g000014 Rmu_sc0002283.1_g000027 Rmu_sc0002284.1_g000014 Rmu_sc0002294.1_g000017 Rmu_sc0002294.1_g000018 Rmu_sc0002307.1_g000020 Rmu_sc0002307.1_g000021 Rmu_sc0002307.1_g000023 Rmu_sc0002357.1_g000054 Rmu_sc0002409.1_g000005 Rmu_sc0002535.1_g000002 Rmu_sc0002589.1_g000014 Rmu_sc0002759.1_g000016 Rmu_sc0002759.1_g000017 Rmu_sc0002777.1_g000015 Rmu_sc0002824.1_g000016 Rmu_sc0002872.1_g000005 Rmu_sc0002872.1_g000012 Rmu_sc0002872.1_g000013 Rmu_sc0002942.1_g000019 Rmu_sc0003337.1_g000001 Rmu_sc0003410.1_g000052 Rmu_sc0003445.1_g000010 Rmu_sc0003773.1_g000007 Rmu_sc0003773.1_g000008 Rmu_sc0003895.1_g000002 Rmu_sc0004063.1_g000006 Rmu_sc0004088.1_g000009 Rmu_sc0004088.1_g000010 Rmu_sc0004174.1_g000027 Rmu_sc0004196.1_g000010 Rmu_sc0004515.1_g000006 Rmu_sc0004727.1_g000010 Rmu_sc0004755.1_g000018 Rmu_sc0005016.1_g000030 Rmu_sc0005026.1_g000001 Rmu_sc0005044.1_g000007 Rmu_sc0005284.1_g000001 Rmu_sc0005431.1_g000030 Rmu_sc0005802.1_g000014 Rmu_sc0005802.1_g000015 Rmu_sc0005994.1_g000004 Rmu_sc0005994.1_g000005 Rmu_sc0006059.1_g000048 Rmu_sc0006583.1_g000013 Rmu_sc0006824.1_g000009 Rmu_sc0007458.1_g000005 Rmu_sc0007707.1_g000002 Rmu_sc0008242.1_g000012 Rmu_sc0008713.1_g000006 Rmu_sc0008770.1_g000008 Rmu_sc0009785.1_g000004 Rmu_sc0009785.1_g000005 Rmu_sc0010125.1_g000001 Rmu_sc0010211.1_g000004 Rmu_sc0011034.1_g000001 Rmu_sc0011833.1_g000006 Rmu_sc0014851.1_g000001 Rmu_sc0014899.1_g000001 Rmu_sc0015060.1_g000003 Rmu_sc0015186.1_g000001 Rmu_sc0015248.1_g000003 Rmu_sc0015248.1_g000004 Rmu_sc0015314.1_g000001 Rmu_sc0018098.1_g000002 Rmu_sc0022706.1_g000004 Rmu_sc0023350.1_g000002 Rmu_sc0027636.1_g000001 Rmu_sc0027672.1_g000003 Rmu_sc0030879.1_g000001 Rmu_ssc0000008.1_g000029 Rmu_ssc0000019.1_g000014 Rmu_ssc0000050.1_g000082 Rmu_ssc0000282.1_g000004 Rmu_ssc0000311.1_g000010
rosa_roxburghii Rroxscaffold_1G00015190 Rroxscaffold_1G00031880 Rroxscaffold_1G00031890 Rroxscaffold_1G00059310 Rroxscaffold_1G00060420 Rroxscaffold_1G00067930 Rroxscaffold_1G00075030 Rroxscaffold_2G00082210 Rroxscaffold_2G00122970 Rroxscaffold_3G00218230 Rroxscaffold_3G00219020 Rroxscaffold_3G00219030 Rroxscaffold_3G00223680 Rroxscaffold_3G00223690 Rroxscaffold_3G00223700 Rroxscaffold_3G00226870 Rroxscaffold_3G00226880 Rroxscaffold_3G00232990 Rroxscaffold_3G00265610 Rroxscaffold_3G00265620 Rroxscaffold_3G00265630 Rroxscaffold_4G00318660 Rroxscaffold_4G00319060 Rroxscaffold_4G00323500 Rroxscaffold_5G00357520 Rroxscaffold_5G00366150 Rroxscaffold_5G00377470 Rroxscaffold_6G00395700 Rroxscaffold_6G00413950 Rroxscaffold_7G00187650 Rroxscaffold_7G00198290 Rroxscaffold_7G00198300 Rroxscaffold_7G00208060
rosa_rugosa Rorug01G0173900 Rorug01G0174000 Rorug01G0174100 Rorug01G0174100 Rorug02G0341200 Rorug04G0135700 Rorug04G0135800 Rorug05G0032500 Rorug06G0021800
rosa_samantha Rh1AG036600 Rh1AG245800 Rh1CG021700 Rh1CG021800 Rh1CG085800 Rh1CG085900 Rh1CG187900 Rh1CG229600 Rh1CG239600 Rh1CG246500 Rh1CG246600 Rh2BG478100 Rh2DG341300 Rh2DG366600 Rh2DG375700 Rh2DG384300 Rh2DG487000 Rh2DG504000 Rh2DG504100 Rh3AG311800 Rh3AG327500 Rh3AG328300 Rh3BG345100 Rh3CG320100 Rh4AG005700 Rh4AG067900 Rh4AG068000 Rh4AG084400 Rh4AG106700 Rh4AG160000 Rh4AG173900 Rh4AG174000 Rh4CG125300 Rh4CG125500 Rh4CG264500 Rh4DG110800 Rh5AG047300 Rh5AG085200 Rh5AG126300 Rh5AG127300 Rh5AG203000 Rh5AG332400 Rh5AG332500 Rh5AG342400 Rh5AG344100 Rh5AG375600 Rh5AG378300 Rh5AG386000 Rh5AG529600 Rh5BG125200 Rh5CG137600 Rh5CG137700 Rh5DG125200 Rh6BG134100 Rh6BG175400 Rh6BG179500 Rh6BG179600 Rh6BG181600 Rh6BG181700 Rh6BG191100 Rh6BG232900 Rh6BG259700 Rh6BG259800 Rh7AG028000 Rh7AG319400 Rh7AG352700 Rh7AG352800 Rh7AG352900 Rh7AG482500 Rh7AG482600 Rh7AG503800 Rh7BG334700 Rh7CG200100 Rh7CG336200 Rh7CG370200 Rh7CG370400 Rh7CG370500
rosa_wichuraiana Rw1G001580 Rw1G003570 Rw1G004260 Rw1G004270 Rw1G021170 Rw2G019390 Rw2G040280 Rw2G044050 Rw4G004430 Rw5G010950 Rw5G018350 Rw5G032890 Rw6G002840 Rw6G006510 Rw6G007780 Rw6G033790 Rw7G036320 Rw7G040550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 359, 1569
AccII CGCG 1 cut(s) 557
AciI CCGC 5 cut(s) 557, 628, 1004, 1181, 1464
AclWI GGATC 4 cut(s) 303, 316, 541, 1002
AcsI RAATTY 2 cut(s) 406, 1258
AcuI CTGAAG 1 cut(s) 1791
AcvI CACGTG 1 cut(s) 782
AcyI GRCGYC 1 cut(s) 540
AfaI GTAC 3 cut(s) 844, 1191, 1328
AfiI CCNNNNNNNGG 5 cut(s) 257, 556, 856, 1620, 1807
AjnI CCWGG 1 cut(s) 990
AjuI GAANNNNNNNTTGG 4 cut(s) 72, 104, 1367, 1399
Alw21I GWGCWC 2 cut(s) 167, 1410
Alw26I GTCTC 4 cut(s) 1103, 1271, 1647, 1834
AlwI GGATC 4 cut(s) 303, 316, 541, 1002
Ama87I CYCGRG 1 cut(s) 1759
ApeKI GCWGC 1 cut(s) 218
ApoI RAATTY 2 cut(s) 406, 1258
ArsI GACNNNNNNTTYG 2 cut(s) 437, 469
Asp700I GAANNNNTTC 2 cut(s) 505, 591
AspLEI GCGC 2 cut(s) 557, 959
AspS9I GGNCC 3 cut(s) 105, 207, 248
AsuHPI GGTGA 6 cut(s) 548, 704, 994, 1489, 1588, 1775
AsuII TTCGAA 1 cut(s) 897
AvaI CYCGRG 1 cut(s) 1759
AvaII GGWCC 2 cut(s) 105, 207
BaeGI GKGCMC 1 cut(s) 991
BalI TGGCCA 3 cut(s) 477, 1359, 1718
BamHI GGATCC 1 cut(s) 308
BauI CACGAG 1 cut(s) 1057
BbrPI CACGTG 1 cut(s) 782
BbsI GAAGAC 1 cut(s) 1382
Bbv12I GWGCWC 2 cut(s) 167, 1410
BbvI GCAGC 1 cut(s) 205
BccI CCATC 8 cut(s) 26, 278, 467, 617, 813, 970, 1475, 1657
BceAI ACGGC 1 cut(s) 47
BciT130I CCWGG 1 cut(s) 992
BclI TGATCA 2 cut(s) 130, 634
BcoDI GTCTC 4 cut(s) 1103, 1271, 1647, 1834
BfaI CTAG 4 cut(s) 245, 851, 1046, 1158
BisI GCNGC 3 cut(s) 219, 628, 1464
BlsI GCNGC 3 cut(s) 220, 629, 1465
BmcAI AGTACT 1 cut(s) 1191
Bme1390I CCNGG 1 cut(s) 992
Bme18I GGWCC 2 cut(s) 105, 207
BmeT110I CYCGRG 1 cut(s) 1759
BmgT120I GGNCC 3 cut(s) 105, 207, 248
BmiI GGNNCC 4 cut(s) 208, 209, 250, 310
BmrFI CCNGG 1 cut(s) 992
BmsI GCATC 4 cut(s) 472, 729, 766, 1560
BpiI GAAGAC 1 cut(s) 1382
BplI GAGNNNNNCTC 4 cut(s) 1598, 1630, 1785, 1817
BpmI CTGGAG 1 cut(s) 1349
Bpu14I TTCGAA 1 cut(s) 897
BpuEI CTTGAG 1 cut(s) 1127
BsaAI YACGTR 1 cut(s) 782
BsaHI GRCGYC 1 cut(s) 540
BsaJI CCNNGG 6 cut(s) 252, 756, 990, 1152, 1599, 1786
BsaXI ACNNNNNCTCC 2 cut(s) 898, 928
Bsc4I CCNNNNNNNGG 5 cut(s) 257, 556, 856, 1620, 1807
Bse1I ACTGG 2 cut(s) 538, 1342
BseBI CCWGG 1 cut(s) 992
BseDI CCNNGG 6 cut(s) 252, 756, 990, 1152, 1599, 1786
BseGI GGATG 8 cut(s) 289, 400, 475, 766, 883, 933, 1012, 1467
BseLI CCNNNNNNNGG 5 cut(s) 257, 556, 856, 1620, 1807
BseMII CTCAG 5 cut(s) 65, 1229, 1406, 1649, 1836
BseNI ACTGG 2 cut(s) 538, 1342
BseRI GAGGAG 2 cut(s) 903, 906
BseSI GKGCMC 1 cut(s) 991
BseX3I CGGCCG 6 cut(s) 60, 969, 1461, 1602, 1690, 1789
BseXI GCAGC 1 cut(s) 205
BseYI CCCAGC 1 cut(s) 203
BsgI GTGCAG 1 cut(s) 689
Bsh1236I CGCG 1 cut(s) 557
Bsh1285I CGRYCG 6 cut(s) 63, 972, 1464, 1605, 1693, 1792
BsiEI CGRYCG 6 cut(s) 63, 972, 1464, 1605, 1693, 1792
BsiHKAI GWGCWC 2 cut(s) 167, 1410
BsiHKCI CYCGRG 1 cut(s) 1759
BsiSI CCGG 1 cut(s) 108
BslFI GGGAC 2 cut(s) 220, 1047
BslI CCNNNNNNNGG 5 cut(s) 257, 556, 856, 1620, 1807
BsmAI GTCTC 4 cut(s) 1103, 1271, 1647, 1834
BsmBI CGTCTC 2 cut(s) 1647, 1834
BsmFI GGGAC 2 cut(s) 220, 1047
BsoBI CYCGRG 1 cut(s) 1759
Bsp119I TTCGAA 1 cut(s) 897
Bsp1286I GDGCHC 3 cut(s) 167, 991, 1410
Bsp143I GATC 9 cut(s) 130, 308, 546, 610, 634, 994, 1009, 1351, 1411
BspACI CCGC 5 cut(s) 557, 628, 1004, 1181, 1464
BspCNI CTCAG 5 cut(s) 64, 1228, 1407, 1648, 1835
BspFNI CGCG 1 cut(s) 557
BspHI TCATGA 2 cut(s) 177, 919
BspLI GGNNCC 4 cut(s) 208, 209, 250, 310
BspPI GGATC 4 cut(s) 303, 316, 541, 1002
BspQI GCTCTTC 2 cut(s) 75, 867
BspT104I TTCGAA 1 cut(s) 897
BsrI ACTGG 2 cut(s) 538, 1342
BssECI CCNNGG 6 cut(s) 252, 756, 990, 1152, 1599, 1786
BssMI GATC 9 cut(s) 130, 308, 546, 610, 634, 994, 1009, 1351, 1411
BssNAI GTATAC 1 cut(s) 360
BssNI GRCGYC 1 cut(s) 540
BssSI CACGAG 1 cut(s) 1057
BssT1I CCWWGG 1 cut(s) 252
Bst1107I GTATAC 1 cut(s) 360
Bst2BI CACGAG 1 cut(s) 1057
Bst2UI CCWGG 1 cut(s) 992
Bst4CI ACNGT 3 cut(s) 1114, 1122, 1147
Bst6I CTCTTC 4 cut(s) 75, 867, 1062, 1538
BstACI GRCGYC 1 cut(s) 540
BstAPI GCANNNNNTGC 1 cut(s) 1405
BstBAI YACGTR 1 cut(s) 782
BstBI TTCGAA 1 cut(s) 897
BstC8I GCNNGC 3 cut(s) 735, 945, 1306
BstDEI CTNAG 5 cut(s) 51, 1215, 1415, 1635, 1822
BstF5I GGATG 8 cut(s) 289, 400, 475, 766, 883, 933, 1012, 1467
BstFNI CGCG 1 cut(s) 557
BstHHI GCGC 2 cut(s) 557, 959
BstKTI GATC 9 cut(s) 133, 311, 549, 613, 637, 997, 1012, 1354, 1414
BstMAI GTCTC 4 cut(s) 1103, 1271, 1647, 1834
BstMBI GATC 9 cut(s) 130, 308, 546, 610, 634, 994, 1009, 1351, 1411
BstMCI CGRYCG 6 cut(s) 63, 972, 1464, 1605, 1693, 1792
BstMWI GCNNNNNNNGC 3 cut(s) 563, 1247, 1405
BstNI CCWGG 1 cut(s) 992
BstSCI CCNGG 1 cut(s) 990
BstSLI GKGCMC 1 cut(s) 991
BstUI CGCG 1 cut(s) 557
BstV1I GCAGC 1 cut(s) 205
BstV2I GAAGAC 1 cut(s) 1382
BstX2I RGATCY 1 cut(s) 308
BstYI RGATCY 1 cut(s) 308
BstZ17I GTATAC 1 cut(s) 360
BstZI CGGCCG 6 cut(s) 60, 969, 1461, 1602, 1690, 1789
BtsCI GGATG 8 cut(s) 289, 400, 475, 766, 883, 933, 1012, 1467
BtsIMutI CAGTG 1 cut(s) 1152
Cac8I GCNNGC 3 cut(s) 735, 945, 1306
CciI TCATGA 2 cut(s) 177, 919
CfoI GCGC 2 cut(s) 557, 959
Cfr13I GGNCC 3 cut(s) 105, 207, 248
CseI GACGC 2 cut(s) 107, 548
Csp6I GTAC 3 cut(s) 843, 1190, 1327
CspCI CAANNNNNGTGG 2 cut(s) 1336, 1371
CviAII CATG 6 cut(s) 24, 178, 664, 679, 920, 1238
CviQI GTAC 3 cut(s) 843, 1190, 1327
DdeI CTNAG 5 cut(s) 51, 1215, 1415, 1635, 1822
DpnI GATC 9 cut(s) 132, 310, 548, 612, 636, 996, 1011, 1353, 1413
DpnII GATC 9 cut(s) 130, 308, 546, 610, 634, 994, 1009, 1351, 1411
EagI CGGCCG 6 cut(s) 60, 969, 1461, 1602, 1690, 1789
Eam1104I CTCTTC 4 cut(s) 75, 867, 1062, 1538
EarI CTCTTC 4 cut(s) 75, 867, 1062, 1538
EclXI CGGCCG 6 cut(s) 60, 969, 1461, 1602, 1690, 1789
Eco130I CCWWGG 1 cut(s) 252
Eco47I GGWCC 2 cut(s) 105, 207
Eco52I CGGCCG 6 cut(s) 60, 969, 1461, 1602, 1690, 1789
Eco57I CTGAAG 1 cut(s) 1791
Eco72I CACGTG 1 cut(s) 782
Eco88I CYCGRG 1 cut(s) 1759
EcoO109I RGGNCCY 2 cut(s) 207, 248
EcoRII CCWGG 1 cut(s) 990
EcoT14I CCWWGG 1 cut(s) 252
ErhI CCWWGG 1 cut(s) 252
Esp3I CGTCTC 2 cut(s) 1647, 1834
FaeI CATG 6 cut(s) 27, 181, 667, 682, 923, 1241
FalI AAGNNNNNCTT 2 cut(s) 1493, 1525
FaqI GGGAC 2 cut(s) 220, 1047
FatI CATG 6 cut(s) 23, 177, 663, 678, 919, 1237
FbaI TGATCA 2 cut(s) 130, 634
FblI GTMKAC 2 cut(s) 359, 1569
Fnu4HI GCNGC 3 cut(s) 219, 628, 1464
FokI GGATG 8 cut(s) 296, 407, 482, 773, 870, 940, 1019, 1454
Fsp4HI GCNGC 3 cut(s) 219, 628, 1464
FspBI CTAG 4 cut(s) 245, 851, 1046, 1158
GlaI GCGC 2 cut(s) 556, 958
GluI GCNGC 3 cut(s) 219, 628, 1464
GsaI CCCAGC 1 cut(s) 207
GsuI CTGGAG 1 cut(s) 1349
HapII CCGG 1 cut(s) 108
HgaI GACGC 2 cut(s) 107, 548
HhaI GCGC 2 cut(s) 557, 959
Hin1I GRCGYC 1 cut(s) 540
Hin1II CATG 6 cut(s) 27, 181, 667, 682, 923, 1241
Hin6I GCGC 2 cut(s) 555, 957
HinP1I GCGC 2 cut(s) 555, 957
HincII GTYRAC 2 cut(s) 676, 1570
HindII GTYRAC 2 cut(s) 676, 1570
HindIII AAGCTT 1 cut(s) 156
HinfI GANTC 4 cut(s) 560, 830, 1060, 1513
HpaII CCGG 1 cut(s) 108
HphI GGTGA 6 cut(s) 548, 704, 994, 1489, 1588, 1775
Hpy166II GTNNAC 7 cut(s) 39, 360, 676, 1347, 1570, 1596, 1783
Hpy8I GTNNAC 7 cut(s) 39, 360, 676, 1347, 1570, 1596, 1783
Hpy99I CGWCG 2 cut(s) 123, 427
HpyAV CCTTC 5 cut(s) 251, 569, 1168, 1385, 1389
HpyCH4III ACNGT 3 cut(s) 1114, 1122, 1147
HpyCH4IV ACGT 2 cut(s) 214, 781
HpyCH4V TGCA 3 cut(s) 221, 706, 779
HpyF10VI GCNNNNNNNGC 3 cut(s) 563, 1247, 1405
HpyF3I CTNAG 5 cut(s) 51, 1215, 1415, 1635, 1822
HpySE526I ACGT 2 cut(s) 214, 781
Hsp92I GRCGYC 1 cut(s) 540
Hsp92II CATG 6 cut(s) 27, 181, 667, 682, 923, 1241
HspAI GCGC 2 cut(s) 555, 957
KflI GGGWCCC 1 cut(s) 207
Ksp22I TGATCA 2 cut(s) 130, 634
Kzo9I GATC 9 cut(s) 130, 308, 546, 610, 634, 994, 1009, 1351, 1411
LguI GCTCTTC 2 cut(s) 75, 867
LmnI GCTCC 1 cut(s) 964
Lsp1109I GCAGC 1 cut(s) 205
LweI GCATC 4 cut(s) 472, 729, 766, 1560
MaeI CTAG 4 cut(s) 245, 851, 1046, 1158
MaeII ACGT 2 cut(s) 214, 781
MaeIII GTNAC 5 cut(s) 68, 412, 536, 1147, 1453
MalI GATC 9 cut(s) 132, 310, 548, 612, 636, 996, 1011, 1353, 1413
MboI GATC 9 cut(s) 130, 308, 546, 610, 634, 994, 1009, 1351, 1411
MboII GAAGA 9 cut(s) 92, 283, 346, 599, 854, 957, 1079, 1387, 1555
MflI RGATCY 1 cut(s) 308
MhlI GDGCHC 3 cut(s) 167, 991, 1410
MlsI TGGCCA 3 cut(s) 477, 1359, 1718
MluCI AATT 7 cut(s) 86, 406, 513, 854, 1031, 1258, 1675
MluNI TGGCCA 3 cut(s) 477, 1359, 1718
MlyI GAGTC 2 cut(s) 554, 1069
Mox20I TGGCCA 3 cut(s) 477, 1359, 1718
MroXI GAANNNNTTC 2 cut(s) 505, 591
MscI TGGCCA 3 cut(s) 477, 1359, 1718
MseI TTAA 2 cut(s) 293, 1709
MslI CAYNNNNRTG 1 cut(s) 1677
Msp20I TGGCCA 3 cut(s) 477, 1359, 1718
MspA1I CMGCKG 1 cut(s) 1004
MspI CCGG 1 cut(s) 108
MspR9I CCNGG 1 cut(s) 992
MvaI CCWGG 1 cut(s) 992
MvnI CGCG 1 cut(s) 557
MwoI GCNNNNNNNGC 3 cut(s) 563, 1247, 1405
NdeII GATC 9 cut(s) 130, 308, 546, 610, 634, 994, 1009, 1351, 1411
NlaIII CATG 6 cut(s) 27, 181, 667, 682, 923, 1241
NlaIV GGNNCC 4 cut(s) 208, 209, 250, 310
NmuCI GTSAC 4 cut(s) 412, 536, 1147, 1453
NspV TTCGAA 1 cut(s) 897
PaeR7I CTCGAG 1 cut(s) 1759
PagI TCATGA 2 cut(s) 177, 919
PciSI GCTCTTC 2 cut(s) 75, 867
PcsI WCGNNNNNNNCGW 1 cut(s) 1529
PdmI GAANNNNTTC 2 cut(s) 505, 591
PfeI GAWTC 2 cut(s) 830, 1513
PkrI GCNGC 3 cut(s) 220, 629, 1465
PleI GAGTC 2 cut(s) 554, 1068
PmaCI CACGTG 1 cut(s) 782
PmlI CACGTG 1 cut(s) 782
PpsI GAGTC 2 cut(s) 554, 1068
Ppu21I YACGTR 1 cut(s) 782
PpuMI RGGWCCY 1 cut(s) 207
Psp5II RGGWCCY 1 cut(s) 207
Psp6I CCWGG 1 cut(s) 990
PspCI CACGTG 1 cut(s) 782
PspFI CCCAGC 1 cut(s) 203
PspGI CCWGG 1 cut(s) 990
PspN4I GGNNCC 4 cut(s) 208, 209, 250, 310
PspPI GGNCC 3 cut(s) 105, 207, 248
PspPPI RGGWCCY 1 cut(s) 207
PspXI VCTCGAGB 1 cut(s) 1759
PsuI RGATCY 1 cut(s) 308
RsaI GTAC 3 cut(s) 844, 1191, 1328
RsaNI GTAC 3 cut(s) 843, 1190, 1327
RseI CAYNNNNRTG 1 cut(s) 1677
SalI GTCGAC 1 cut(s) 1568
SapI GCTCTTC 2 cut(s) 75, 867
SaqAI TTAA 2 cut(s) 293, 1709
SatI GCNGC 3 cut(s) 219, 628, 1464
Sau3AI GATC 9 cut(s) 130, 308, 546, 610, 634, 994, 1009, 1351, 1411
Sau96I GGNCC 3 cut(s) 105, 207, 248
ScaI AGTACT 1 cut(s) 1191
SchI GAGTC 2 cut(s) 554, 1069
ScrFI CCNGG 1 cut(s) 992
SduI GDGCHC 3 cut(s) 167, 991, 1410
SfaNI GCATC 4 cut(s) 472, 729, 766, 1560
Sfr274I CTCGAG 1 cut(s) 1759
SfuI TTCGAA 1 cut(s) 897
SinI GGWCC 2 cut(s) 105, 207
SlaI CTCGAG 1 cut(s) 1759
SmiMI CAYNNNNRTG 1 cut(s) 1677
SmlI CTYRAG 2 cut(s) 1106, 1759
SmoI CTYRAG 2 cut(s) 1106, 1759
Sse9I AATT 7 cut(s) 86, 406, 513, 854, 1031, 1258, 1675
SsiI CCGC 5 cut(s) 557, 628, 1004, 1181, 1464
SspMI CTAG 4 cut(s) 245, 851, 1046, 1158
StyD4I CCNGG 1 cut(s) 990
StyI CCWWGG 1 cut(s) 252
TaaI ACNGT 3 cut(s) 1114, 1122, 1147
TaiI ACGT 2 cut(s) 217, 784
TaqI TCGA 9 cut(s) 167, 332, 545, 716, 835, 897, 1410, 1569, 1760
TaqII GACCGA 2 cut(s) 1166, 1513
TasI AATT 7 cut(s) 86, 406, 513, 854, 1031, 1258, 1675
TatI WGTACW 2 cut(s) 842, 1189
TauI GCSGC 2 cut(s) 630, 1466
TfiI GAWTC 2 cut(s) 830, 1513
Tru1I TTAA 2 cut(s) 293, 1709
Tru9I TTAA 2 cut(s) 293, 1709
TscAI CASTG 1 cut(s) 1152
TseFI GTSAC 4 cut(s) 412, 536, 1147, 1453
TseI GCWGC 1 cut(s) 218
Tsp45I GTSAC 4 cut(s) 412, 536, 1147, 1453
TspDTI ATGAA 4 cut(s) 93, 194, 1226, 1245
TspGWI ACGGA 1 cut(s) 440
TspRI CASTG 1 cut(s) 1152
VpaK11BI GGWCC 2 cut(s) 105, 207
XapI RAATTY 2 cut(s) 406, 1258
XbaI TCTAGA 1 cut(s) 1045
XcmI CCANNNNNNNNNTGG 1 cut(s) 1676
XhoI CTCGAG 1 cut(s) 1759
XmiI GTMKAC 2 cut(s) 359, 1569
XmnI GAANNNNTTC 2 cut(s) 505, 591
XspI CTAG 4 cut(s) 245, 851, 1046, 1158
ZrmI AGTACT 1 cut(s) 1191
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.