Rmu_sc0005016.1_g000030

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005016.1
OG0000063
Physical Location & Seq
Forward (+)
123849 .. 125216
1368 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005016.1_g000030.1.cds

Sequence Viewer

Length: 1368 bp
atggacaacgcagtaaaagaagaggctgtagaattttcagcaaaatacaacctagctctattgtcaatgaaggatgtggtgcatgaaggagtaattcatgaattatcaggggacactccaccatcctgttatttaggtcctcactttcctggaggcatgccacaagtaatctcacaagttcttgatgagtaccaaacggacacctcatggcattttactgaacgtgactggtcttcgtggcatgccagctggaagccgcaaggttggccaactcttacagacgagtggaaagcatgggttccaagaatggagcattactttggcgacctttggaaagaaattggtatctttcacgccatcaaactcacgaaacaagacatagtggcagaaaaacccatgttagccgcagcactatgtttttgggcctctactactaataccatgaatctgccattaggctacatgagtcctacaattttagacatatgtaccatcaccggcctatcacccaatggtattgaaattagtgcgaaccacagtcttccaacaacttttatagatagctttcttcctcccaaatatgatgataaagaagaacaaatggatgctacaaacgaatcaaagaggcatcacaactacaacactttgtataacacatatggtgtggtcgactcaaaagaatctttagaaagacaaccggtcaaagagtatgaacacgcggctttcttgttctactggttatgcaagtacatattttgttgcaagtcaggaccgtgcccttgtgactatgcagcaatagccgaggccttggcttctggtaccaaactagccctcgacccatttgttcttgcgcatctttatagatgtttgcaccgtattgtgactaaccgcatgaatcctaatgttggcggtccgctttggatgttccagctgtggctacgagcttatttccctcaattgtctgctgctcggcctgaatacaactacgatgttatctaccgccgataccttatggctataccttcatcccacatgtcttttgaagactgctttaagatgttttacacacttcgaagtttagagagcttctctgtctgctattctcaatggcatccagcctccactacacttggtttgaatgaagcatcagaagttcttagtgaagttcaattaagagaaacttgggccagctttctaatttcacaggatctacattttggacttgcaacctccagcaaatacaaaccaggtgttgagatttacctccccaactactttgctcgtcagtttggatttatgcagagctgccctgtcccatatcaacattctgaaaaaaatttgagttcatggtgccgaaagttcagataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

455

Amino Acids

52.41

Weight (kDa)

5.86

Isoelectric Point (pI)

47.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000063)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21382 FvH4_1g29794 FvH4_1g29795 FvH4_2g35573 FvH4_2g35574 FvH4_4g18552 FvH4_5g16044
malus_domestica MD05G1017000.v1.1
prunus_persica Prupe.3G140800_v2.0.a1 Prupe.6G164100_v2.0.a1
pyrus_communis pycom01g04330 pycom03g19820 pycom04g06720 pycom06g11360 pycom06g19000 pycom10g08100 pycom13g16660 pycom13g27590 pycom13g27640 pycom13g27890 pycom16g11770 pycom16g19530
rosa_chinensis RchiOBHm_Chr1g0317341 RchiOBHm_Chr1g0317351 RchiOBHm_Chr1g0320431 RchiOBHm_Chr1g0320711 RchiOBHm_Chr1g0320721 RchiOBHm_Chr1g0321611 RchiOBHm_Chr1g0321621 RchiOBHm_Chr1g0321631 RchiOBHm_Chr1g0323651 RchiOBHm_Chr1g0332991 RchiOBHm_Chr1g0333001 RchiOBHm_Chr1g0335981 RchiOBHm_Chr1g0335991 RchiOBHm_Chr1g0336001 RchiOBHm_Chr1g0350201 RchiOBHm_Chr1g0368201 RchiOBHm_Chr2g0105531 RchiOBHm_Chr2g0105541 RchiOBHm_Chr2g0116571 RchiOBHm_Chr2g0116581 RchiOBHm_Chr2g0121071 RchiOBHm_Chr2g0131351 RchiOBHm_Chr2g0131661 RchiOBHm_Chr2g0133021 RchiOBHm_Chr2g0138181 RchiOBHm_Chr2g0138191 RchiOBHm_Chr2g0142701 RchiOBHm_Chr2g0142711 RchiOBHm_Chr2g0152981 RchiOBHm_Chr3g0456181 RchiOBHm_Chr3g0456191 RchiOBHm_Chr3g0493631 RchiOBHm_Chr3g0496201 RchiOBHm_Chr4g0401541 RchiOBHm_Chr4g0410311 RchiOBHm_Chr4g0410321 RchiOBHm_Chr4g0419231 RchiOBHm_Chr4g0419511 RchiOBHm_Chr4g0419521 RchiOBHm_Chr5g0004311 RchiOBHm_Chr5g0004321 RchiOBHm_Chr5g0038131 RchiOBHm_Chr5g0038251 RchiOBHm_Chr5g0038261 RchiOBHm_Chr5g0038271 RchiOBHm_Chr5g0052241 RchiOBHm_Chr5g0053911 RchiOBHm_Chr5g0074641 RchiOBHm_Chr5g0076651 RchiOBHm_Chr5g0076661 RchiOBHm_Chr6g0249161 RchiOBHm_Chr6g0249171 RchiOBHm_Chr6g0250961 RchiOBHm_Chr6g0253701 RchiOBHm_Chr6g0262131 RchiOBHm_Chr6g0263181 RchiOBHm_Chr6g0263231 RchiOBHm_Chr6g0263241 RchiOBHm_Chr6g0263251 RchiOBHm_Chr6g0291271 RchiOBHm_Chr7g0194611 RchiOBHm_Chr7g0219691 RchiOBHm_Chr7g0219701 RchiOBHm_Chr7g0225431 RchiOBHm_Chr7g0234221 RchiOBHm_Chr7g0238711 RchiOBHm_Chr7g0238721 RchiOBHm_Chr7g0238731 RchiOBHm_Chr7g0239611 RchiOBHm_Chr7g0239621
rosa_laevigata RLG00000001361 RLG00000001376 RLG00000001860 RLG00000002051 RLG00000002362 RLG00000008940 RLG00000012764 RLG00000018782 RLG00000029639 RLG00000030151
rosa_multiflora Rmu_co8090794.1_g000001 Rmu_co8135356.1_g000001 Rmu_co8224968.1_g000001 Rmu_sc0000016.1_g000020 Rmu_sc0000029.1_g000061 Rmu_sc0000035.1_g000032 Rmu_sc0000060.1_g000041 Rmu_sc0000148.1_g000041 Rmu_sc0000315.1_g000084 Rmu_sc0000527.1_g000005 Rmu_sc0000527.1_g000007 Rmu_sc0000527.1_g000008 Rmu_sc0000648.1_g000002 Rmu_sc0000762.1_g000076 Rmu_sc0000870.1_g000003 Rmu_sc0000870.1_g000004 Rmu_sc0000948.1_g000037 Rmu_sc0000997.1_g000003 Rmu_sc0001047.1_g000041 Rmu_sc0001047.1_g000042 Rmu_sc0001075.1_g000044 Rmu_sc0001174.1_g000006 Rmu_sc0001235.1_g000025 Rmu_sc0001292.1_g000008 Rmu_sc0001301.1_g000038 Rmu_sc0001461.1_g000069 Rmu_sc0001461.1_g000070 Rmu_sc0001669.1_g000041 Rmu_sc0001689.1_g000027 Rmu_sc0001896.1_g000008 Rmu_sc0001909.1_g000013 Rmu_sc0002170.1_g000038 Rmu_sc0002200.1_g000014 Rmu_sc0002283.1_g000027 Rmu_sc0002284.1_g000014 Rmu_sc0002294.1_g000017 Rmu_sc0002294.1_g000018 Rmu_sc0002307.1_g000020 Rmu_sc0002307.1_g000021 Rmu_sc0002307.1_g000023 Rmu_sc0002357.1_g000054 Rmu_sc0002409.1_g000005 Rmu_sc0002535.1_g000002 Rmu_sc0002589.1_g000014 Rmu_sc0002759.1_g000016 Rmu_sc0002759.1_g000017 Rmu_sc0002777.1_g000015 Rmu_sc0002824.1_g000016 Rmu_sc0002872.1_g000005 Rmu_sc0002872.1_g000012 Rmu_sc0002872.1_g000013 Rmu_sc0002942.1_g000019 Rmu_sc0003337.1_g000001 Rmu_sc0003410.1_g000052 Rmu_sc0003445.1_g000010 Rmu_sc0003773.1_g000007 Rmu_sc0003773.1_g000008 Rmu_sc0003895.1_g000002 Rmu_sc0004063.1_g000006 Rmu_sc0004088.1_g000009 Rmu_sc0004088.1_g000010 Rmu_sc0004174.1_g000027 Rmu_sc0004196.1_g000010 Rmu_sc0004515.1_g000006 Rmu_sc0004727.1_g000010 Rmu_sc0004755.1_g000018 Rmu_sc0005016.1_g000030 Rmu_sc0005026.1_g000001 Rmu_sc0005044.1_g000007 Rmu_sc0005284.1_g000001 Rmu_sc0005431.1_g000030 Rmu_sc0005802.1_g000014 Rmu_sc0005802.1_g000015 Rmu_sc0005994.1_g000004 Rmu_sc0005994.1_g000005 Rmu_sc0006059.1_g000048 Rmu_sc0006583.1_g000013 Rmu_sc0006824.1_g000009 Rmu_sc0007458.1_g000005 Rmu_sc0007707.1_g000002 Rmu_sc0008242.1_g000012 Rmu_sc0008713.1_g000006 Rmu_sc0008770.1_g000008 Rmu_sc0009785.1_g000004 Rmu_sc0009785.1_g000005 Rmu_sc0010125.1_g000001 Rmu_sc0010211.1_g000004 Rmu_sc0011034.1_g000001 Rmu_sc0011833.1_g000006 Rmu_sc0014851.1_g000001 Rmu_sc0014899.1_g000001 Rmu_sc0015060.1_g000003 Rmu_sc0015186.1_g000001 Rmu_sc0015248.1_g000003 Rmu_sc0015248.1_g000004 Rmu_sc0015314.1_g000001 Rmu_sc0018098.1_g000002 Rmu_sc0022706.1_g000004 Rmu_sc0023350.1_g000002 Rmu_sc0027636.1_g000001 Rmu_sc0027672.1_g000003 Rmu_sc0030879.1_g000001 Rmu_ssc0000008.1_g000029 Rmu_ssc0000019.1_g000014 Rmu_ssc0000050.1_g000082 Rmu_ssc0000282.1_g000004 Rmu_ssc0000311.1_g000010
rosa_roxburghii Rroxscaffold_1G00015190 Rroxscaffold_1G00031880 Rroxscaffold_1G00031890 Rroxscaffold_1G00059310 Rroxscaffold_1G00060420 Rroxscaffold_1G00067930 Rroxscaffold_1G00075030 Rroxscaffold_2G00082210 Rroxscaffold_2G00122970 Rroxscaffold_3G00218230 Rroxscaffold_3G00219020 Rroxscaffold_3G00219030 Rroxscaffold_3G00223680 Rroxscaffold_3G00223690 Rroxscaffold_3G00223700 Rroxscaffold_3G00226870 Rroxscaffold_3G00226880 Rroxscaffold_3G00232990 Rroxscaffold_3G00265610 Rroxscaffold_3G00265620 Rroxscaffold_3G00265630 Rroxscaffold_4G00318660 Rroxscaffold_4G00319060 Rroxscaffold_4G00323500 Rroxscaffold_5G00357520 Rroxscaffold_5G00366150 Rroxscaffold_5G00377470 Rroxscaffold_6G00395700 Rroxscaffold_6G00413950 Rroxscaffold_7G00187650 Rroxscaffold_7G00198290 Rroxscaffold_7G00198300 Rroxscaffold_7G00208060
rosa_rugosa Rorug01G0173900 Rorug01G0174000 Rorug01G0174100 Rorug01G0174100 Rorug02G0341200 Rorug04G0135700 Rorug04G0135800 Rorug05G0032500 Rorug06G0021800
rosa_samantha Rh1AG036600 Rh1AG245800 Rh1CG021700 Rh1CG021800 Rh1CG085800 Rh1CG085900 Rh1CG187900 Rh1CG229600 Rh1CG239600 Rh1CG246500 Rh1CG246600 Rh2BG478100 Rh2DG341300 Rh2DG366600 Rh2DG375700 Rh2DG384300 Rh2DG487000 Rh2DG504000 Rh2DG504100 Rh3AG311800 Rh3AG327500 Rh3AG328300 Rh3BG345100 Rh3CG320100 Rh4AG005700 Rh4AG067900 Rh4AG068000 Rh4AG084400 Rh4AG106700 Rh4AG160000 Rh4AG173900 Rh4AG174000 Rh4CG125300 Rh4CG125500 Rh4CG264500 Rh4DG110800 Rh5AG047300 Rh5AG085200 Rh5AG126300 Rh5AG127300 Rh5AG203000 Rh5AG332400 Rh5AG332500 Rh5AG342400 Rh5AG344100 Rh5AG375600 Rh5AG378300 Rh5AG386000 Rh5AG529600 Rh5BG125200 Rh5CG137600 Rh5CG137700 Rh5DG125200 Rh6BG134100 Rh6BG175400 Rh6BG179500 Rh6BG179600 Rh6BG181600 Rh6BG181700 Rh6BG191100 Rh6BG232900 Rh6BG259700 Rh6BG259800 Rh7AG028000 Rh7AG319400 Rh7AG352700 Rh7AG352800 Rh7AG352900 Rh7AG482500 Rh7AG482600 Rh7AG503800 Rh7BG334700 Rh7CG200100 Rh7CG336200 Rh7CG370200 Rh7CG370400 Rh7CG370500
rosa_wichuraiana Rw1G001580 Rw1G003570 Rw1G004260 Rw1G004270 Rw1G021170 Rw2G019390 Rw2G040280 Rw2G044050 Rw4G004430 Rw5G010950 Rw5G018350 Rw5G032890 Rw6G002840 Rw6G006510 Rw6G007780 Rw6G033790 Rw7G036320 Rw7G040550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 852
Acc65I GGTACC 1 cut(s) 818
AccB1I GGYRCC 2 cut(s) 818, 1350
AccI GTMKAC 1 cut(s) 669
AccII CGCG 1 cut(s) 719
AciI CCGC 7 cut(s) 257, 405, 719, 889, 909, 914, 1000
AclWI GGATC 1 cut(s) 1215
AcoI YGGCCR 1 cut(s) 266
AcsI RAATTY 2 cut(s) 32, 1336
AfaI GTAC 4 cut(s) 191, 490, 749, 820
AfiI CCNNNNNNNGG 1 cut(s) 905
AflIII ACRYGT 1 cut(s) 1032
AgeI ACCGGT 1 cut(s) 697
AgsI TTSAA 4 cut(s) 521, 1043, 1138, 1169
AhdI GACNNNNNGTC 1 cut(s) 698
AjnI CCWGG 2 cut(s) 148, 1246
AluBI AGCT 8 cut(s) 56, 249, 564, 931, 944, 1086, 1191, 1305
AluI AGCT 8 cut(s) 56, 249, 564, 931, 944, 1086, 1191, 1305
AlwI GGATC 1 cut(s) 1215
AoxI GGCC 6 cut(s) 266, 423, 499, 804, 971, 1185
ApeKI GCWGC 4 cut(s) 407, 791, 965, 1305
ApoI RAATTY 2 cut(s) 32, 1336
AsiGI ACCGGT 1 cut(s) 697
Asp718I GGTACC 1 cut(s) 818
AspLEI GCGC 1 cut(s) 853
AspS9I GGNCC 5 cut(s) 137, 423, 770, 911, 1185
AsuHPI GGTGA 2 cut(s) 487, 498
AsuII TTCGAA 1 cut(s) 1072
AvaII GGWCC 3 cut(s) 137, 770, 911
BaeGI GKGCMC 1 cut(s) 779
BaeI ACNNNNGTAYC 2 cut(s) 472, 505
BalI TGGCCA 1 cut(s) 268
BanI GGYRCC 2 cut(s) 818, 1350
BbsI GAAGAC 3 cut(s) 225, 533, 1050
BbvI GCAGC 4 cut(s) 419, 803, 952, 1292
BccI CCATC 3 cut(s) 130, 365, 500
BciT130I CCWGG 2 cut(s) 150, 1248
BfaI CTAG 2 cut(s) 53, 827
BfmI CTRYAG 1 cut(s) 27
BisI GCNGC 7 cut(s) 257, 405, 408, 720, 792, 966, 1306
BlsI GCNGC 7 cut(s) 258, 406, 409, 721, 793, 967, 1307
Bme1390I CCNGG 2 cut(s) 150, 1248
Bme18I GGWCC 3 cut(s) 137, 770, 911
BmeRI GACNNNNNGTC 1 cut(s) 698
BmgT120I GGNCC 5 cut(s) 137, 423, 770, 911, 1185
BmiI GGNNCC 3 cut(s) 300, 820, 1352
BmrFI CCNGG 2 cut(s) 150, 1248
BmsI GCATC 5 cut(s) 595, 637, 862, 1120, 1154
BpiI GAAGAC 3 cut(s) 225, 533, 1050
BplI GAGNNNNNCTC 2 cut(s) 1073, 1105
BpmI CTGGAG 2 cut(s) 171, 1216
Bpu14I TTCGAA 1 cut(s) 1072
BsaJI CCNNGG 2 cut(s) 801, 807
BsaWI WCCGGW 1 cut(s) 697
Bsc4I CCNNNNNNNGG 1 cut(s) 905
Bse118I RCCGGY 2 cut(s) 497, 697
Bse1I ACTGG 2 cut(s) 233, 740
BseBI CCWGG 2 cut(s) 150, 1248
BseDI CCNNGG 2 cut(s) 801, 807
BseGI GGATG 6 cut(s) 79, 122, 610, 927, 1025, 1111
BseLI CCNNNNNNNGG 1 cut(s) 905
BseNI ACTGG 2 cut(s) 233, 740
BseSI GKGCMC 1 cut(s) 779
BseXI GCAGC 4 cut(s) 419, 803, 952, 1292
Bsh1236I CGCG 1 cut(s) 719
BshFI GGCC 6 cut(s) 268, 425, 501, 806, 973, 1187
BshNI GGYRCC 2 cut(s) 818, 1350
BshTI ACCGGT 1 cut(s) 697
BsiSI CCGG 2 cut(s) 498, 698
BslFI GGGAC 2 cut(s) 125, 1298
BslI CCNNNNNNNGG 1 cut(s) 905
BsmFI GGGAC 2 cut(s) 125, 1298
BsnI GGCC 6 cut(s) 268, 425, 501, 806, 973, 1187
Bsp119I TTCGAA 1 cut(s) 1072
Bsp1286I GDGCHC 1 cut(s) 779
Bsp143I GATC 1 cut(s) 1207
BspACI CCGC 7 cut(s) 257, 405, 719, 889, 909, 914, 1000
BspANI GGCC 6 cut(s) 268, 425, 501, 806, 973, 1187
BspFNI CGCG 1 cut(s) 719
BspHI TCATGA 1 cut(s) 97
BspLI GGNNCC 3 cut(s) 300, 820, 1352
BspPI GGATC 1 cut(s) 1215
BspT104I TTCGAA 1 cut(s) 1072
BspT107I GGYRCC 2 cut(s) 818, 1350
BsrFI RCCGGY 2 cut(s) 497, 697
BsrI ACTGG 2 cut(s) 233, 740
BssAI RCCGGY 2 cut(s) 497, 697
BssECI CCNNGG 2 cut(s) 801, 807
BssMI GATC 1 cut(s) 1207
BssT1I CCWWGG 1 cut(s) 807
Bst2UI CCWGG 2 cut(s) 150, 1248
Bst4CI ACNGT 3 cut(s) 539, 774, 875
Bst6I CTCTTC 1 cut(s) 15
BstBI TTCGAA 1 cut(s) 1072
BstC8I GCNNGC 4 cut(s) 158, 243, 247, 1189
BstDEI CTNAG 1 cut(s) 1157
BstF5I GGATG 6 cut(s) 79, 122, 610, 927, 1025, 1111
BstFNI CGCG 1 cut(s) 719
BstHHI GCGC 1 cut(s) 853
BstKTI GATC 1 cut(s) 1210
BstMBI GATC 1 cut(s) 1207
BstMWI GCNNNNNNNGC 2 cut(s) 265, 797
BstNI CCWGG 2 cut(s) 150, 1248
BstNSI RCATGY 3 cut(s) 160, 245, 1036
BstSCI CCNGG 2 cut(s) 148, 1246
BstSFI CTRYAG 1 cut(s) 27
BstSLI GKGCMC 1 cut(s) 779
BstUI CGCG 1 cut(s) 719
BstV1I GCAGC 4 cut(s) 419, 803, 952, 1292
BstV2I GAAGAC 3 cut(s) 225, 533, 1050
BstX2I RGATCY 1 cut(s) 1207
BstYI RGATCY 1 cut(s) 1207
BsuRI GGCC 6 cut(s) 268, 425, 501, 806, 973, 1187
BtsCI GGATG 6 cut(s) 79, 122, 610, 927, 1025, 1111
Cac8I GCNNGC 4 cut(s) 158, 243, 247, 1189
CciI TCATGA 1 cut(s) 97
CfoI GCGC 1 cut(s) 853
Cfr10I RCCGGY 2 cut(s) 497, 697
Cfr13I GGNCC 5 cut(s) 137, 423, 770, 911, 1185
CpoI CGGWCCG 1 cut(s) 911
CsiI ACCWGGT 1 cut(s) 1246
Csp6I GTAC 4 cut(s) 190, 489, 748, 819
CspAI ACCGGT 1 cut(s) 697
CspCI CAANNNNNGTGG 2 cut(s) 1111, 1146
CspI CGGWCCG 1 cut(s) 911
CviQI GTAC 4 cut(s) 190, 489, 748, 819
DdeI CTNAG 1 cut(s) 1157
DpnI GATC 1 cut(s) 1209
DpnII GATC 1 cut(s) 1207
DriI GACNNNNNGTC 1 cut(s) 698
EaeI YGGCCR 1 cut(s) 266
Eam1104I CTCTTC 1 cut(s) 15
Eam1105I GACNNNNNGTC 1 cut(s) 698
EarI CTCTTC 1 cut(s) 15
Eco130I CCWWGG 1 cut(s) 807
Eco147I AGGCCT 1 cut(s) 806
Eco47I GGWCC 3 cut(s) 137, 770, 911
EcoO109I RGGNCCY 1 cut(s) 137
EcoRII CCWGG 2 cut(s) 148, 1246
EcoT14I CCWWGG 1 cut(s) 807
ErhI CCWWGG 1 cut(s) 807
FalI AAGNNNNNCTT 2 cut(s) 1165, 1197
FaqI GGGAC 2 cut(s) 125, 1298
FauNDI CATATG 2 cut(s) 485, 658
FblI GTMKAC 1 cut(s) 669
Fnu4HI GCNGC 7 cut(s) 257, 405, 408, 720, 792, 966, 1306
FokI GGATG 6 cut(s) 86, 109, 617, 934, 1012, 1098
Fsp4HI GCNGC 7 cut(s) 257, 405, 408, 720, 792, 966, 1306
FspBI CTAG 2 cut(s) 53, 827
FspI TGCGCA 1 cut(s) 852
GlaI GCGC 1 cut(s) 852
GluI GCNGC 7 cut(s) 257, 405, 408, 720, 792, 966, 1306
GsuI CTGGAG 2 cut(s) 171, 1216
HaeIII GGCC 6 cut(s) 268, 425, 501, 806, 973, 1187
HapII CCGG 2 cut(s) 498, 698
HhaI GCGC 1 cut(s) 853
Hin6I GCGC 1 cut(s) 851
HinP1I GCGC 1 cut(s) 851
HincII GTYRAC 1 cut(s) 670
HindII GTYRAC 1 cut(s) 670
HinfI GANTC 6 cut(s) 445, 466, 617, 671, 680, 895
HpaII CCGG 2 cut(s) 498, 698
HphI GGTGA 2 cut(s) 487, 498
Hpy166II GTNNAC 1 cut(s) 670
Hpy188I TCNGA 3 cut(s) 1150, 1330, 1364
Hpy188III TCNNGA 4 cut(s) 98, 182, 367, 768
Hpy8I GTNNAC 1 cut(s) 670
HpyAV CCTTC 3 cut(s) 64, 80, 1032
HpyCH4III ACNGT 3 cut(s) 539, 774, 875
HpyCH4IV ACGT 1 cut(s) 223
HpyCH4V TGCA 7 cut(s) 82, 744, 762, 791, 871, 1226, 1300
HpyF10VI GCNNNNNNNGC 2 cut(s) 265, 797
HpyF3I CTNAG 1 cut(s) 1157
HpySE526I ACGT 1 cut(s) 223
HspAI GCGC 1 cut(s) 851
KpnI GGTACC 1 cut(s) 822
Kzo9I GATC 1 cut(s) 1207
LmnI GCTCC 1 cut(s) 310
Lsp1109I GCAGC 4 cut(s) 419, 803, 952, 1292
LweI GCATC 5 cut(s) 595, 637, 862, 1120, 1154
MabI ACCWGGT 1 cut(s) 1246
MaeI CTAG 2 cut(s) 53, 827
MaeII ACGT 1 cut(s) 223
MaeIII GTNAC 3 cut(s) 224, 782, 880
MalI GATC 1 cut(s) 1209
MboI GATC 1 cut(s) 1207
MboII GAAGA 6 cut(s) 32, 225, 533, 560, 605, 1055
MfeI CAATTG 1 cut(s) 956
MflI RGATCY 1 cut(s) 1207
MhlI GDGCHC 1 cut(s) 779
MlsI TGGCCA 1 cut(s) 268
MluNI TGGCCA 1 cut(s) 268
MlyI GAGTC 2 cut(s) 475, 665
MmeI TCCRAC 1 cut(s) 569
Mox20I TGGCCA 1 cut(s) 268
MscI TGGCCA 1 cut(s) 268
MseI TTAA 2 cut(s) 1053, 1172
Msp20I TGGCCA 1 cut(s) 268
MspA1I CMGCKG 2 cut(s) 249, 931
MspI CCGG 2 cut(s) 498, 698
MspR9I CCNGG 2 cut(s) 150, 1248
MunI CAATTG 1 cut(s) 956
MvaI CCWGG 2 cut(s) 150, 1248
MvnI CGCG 1 cut(s) 719
MwoI GCNNNNNNNGC 2 cut(s) 265, 797
NdeI CATATG 2 cut(s) 485, 658
NdeII GATC 1 cut(s) 1207
NlaIV GGNNCC 3 cut(s) 300, 820, 1352
NmeAIII GCCGAG 2 cut(s) 826, 949
NmuCI GTSAC 3 cut(s) 224, 782, 880
NsbI TGCGCA 1 cut(s) 852
NspI RCATGY 3 cut(s) 160, 245, 1036
NspV TTCGAA 1 cut(s) 1072
PaeI GCATGC 2 cut(s) 160, 245
PagI TCATGA 1 cut(s) 97
PceI AGGCCT 1 cut(s) 806
PciI ACATGT 1 cut(s) 1032
PfeI GAWTC 4 cut(s) 445, 617, 680, 895
PfoI TCCNGGA 1 cut(s) 148
PinAI ACCGGT 1 cut(s) 697
PkrI GCNGC 7 cut(s) 258, 406, 409, 721, 793, 967, 1307
PleI GAGTC 2 cut(s) 474, 665
PpsI GAGTC 2 cut(s) 474, 665
PpuMI RGGWCCY 1 cut(s) 137
PscI ACATGT 1 cut(s) 1032
Psp5II RGGWCCY 1 cut(s) 137
Psp6I CCWGG 2 cut(s) 148, 1246
PspGI CCWGG 2 cut(s) 148, 1246
PspN4I GGNNCC 3 cut(s) 300, 820, 1352
PspPI GGNCC 5 cut(s) 137, 423, 770, 911, 1185
PspPPI RGGWCCY 1 cut(s) 137
PsuI RGATCY 1 cut(s) 1207
PvuII CAGCTG 2 cut(s) 249, 931
RsaI GTAC 4 cut(s) 191, 490, 749, 820
RsaNI GTAC 4 cut(s) 190, 489, 748, 819
Rsr2I CGGWCCG 1 cut(s) 911
RsrII CGGWCCG 1 cut(s) 911
SalI GTCGAC 1 cut(s) 668
SaqAI TTAA 2 cut(s) 1053, 1172
SatI GCNGC 7 cut(s) 257, 405, 408, 720, 792, 966, 1306
Sau3AI GATC 1 cut(s) 1207
Sau96I GGNCC 5 cut(s) 137, 423, 770, 911, 1185
SchI GAGTC 2 cut(s) 475, 665
ScrFI CCNGG 2 cut(s) 150, 1248
SduI GDGCHC 1 cut(s) 779
SexAI ACCWGGT 1 cut(s) 1246
SfaNI GCATC 5 cut(s) 595, 637, 862, 1120, 1154
SfcI CTRYAG 1 cut(s) 27
SfuI TTCGAA 1 cut(s) 1072
SinI GGWCC 3 cut(s) 137, 770, 911
SphI GCATGC 2 cut(s) 160, 245
SseBI AGGCCT 1 cut(s) 806
SsiI CCGC 7 cut(s) 257, 405, 719, 889, 909, 914, 1000
SspMI CTAG 2 cut(s) 53, 827
StuI AGGCCT 1 cut(s) 806
StyD4I CCNGG 2 cut(s) 148, 1246
StyI CCWWGG 1 cut(s) 807
TaaI ACNGT 3 cut(s) 539, 774, 875
TaiI ACGT 1 cut(s) 226
TaqI TCGA 3 cut(s) 669, 834, 1072
TatI WGTACW 1 cut(s) 747
TauI GCSGC 3 cut(s) 259, 407, 722
TfiI GAWTC 4 cut(s) 445, 617, 680, 895
Tru1I TTAA 2 cut(s) 1053, 1172
Tru9I TTAA 2 cut(s) 1053, 1172
TseFI GTSAC 3 cut(s) 224, 782, 880
TseI GCWGC 4 cut(s) 407, 791, 965, 1305
Tsp45I GTSAC 3 cut(s) 224, 782, 880
TspGWI ACGGA 1 cut(s) 212
VpaK11BI GGWCC 3 cut(s) 137, 770, 911
XapI RAATTY 2 cut(s) 32, 1336
XceI RCATGY 3 cut(s) 160, 245, 1036
XmiI GTMKAC 1 cut(s) 669
XspI CTAG 2 cut(s) 53, 827
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.