Rmu_sc0011034.1_g000001

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0011034.1
OG0000063
Physical Location & Seq
Forward (+)
119 .. 2519
2401 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0011034.1_g000001.1.cds

Sequence Viewer

Length: 1950 bp
atgacacttggccgtcagattattgctcttggcactcatacacattccgctgcgcagtgttttgctttcttttattcaaaaaagactatgtccaaagatgagtttgccatatgttacagccgagatcacccttcttgccttgagatcaacatatcaaaaccatgggataaaaaatttgaattggatgtgattctgacttgggggagttttctgatccctcgagacctgaactatggcctcaaaggcaccgtgggtcggtatggtgttgaggtctatcttcccaattttgttgcacgtcagcttggcttcatacagagttgtccggccttattcttgatgtcaagaaaccacttctcgtcatggagagatgggttcacacgaacttctcagtgttcggccgttggtaactactatgaagagcaatttggcaagtttgagaggtccggcctaaagcctcgttgtcctgatcatagagccaccccacacttccaagcttggtggtcgacttttatcatgaaaaatcttggaaaggacttggctgggacccaacgtgctgcattacaaggacttccgaacttgctaggccccaaggaaggtaatggtaagaagaaagcacaggatggcaagttaaaatcaaccaaaggatcctctaaacaaggacaaacatcgaagaaacgtggctcaacattggcgtatactcggaacgccaagaaatcaaagaaatcatcggatgtggtggagaattcggtcacaaacccgacggacactatggttagtgaggacatattttttgaggctaatatggatgatgggcacgatgctttggctgaaaaccgaaatacgtctgaaattgaggatatggccgaaactggtgacgcctcgatccatagcgcggactcggctgatagcgaaggttattcggaagaagctcaatcagaaagtggcgatcaagagagagatggccgcattgatcattctttgcccccacttgaaaactccatgattgagattgacatggacgacttgggtgagagccaactgcacaacacgttgagcatcgaccaacagcttgccatatcaaacaacttttccaaggatgttgaaaacacagatgcacgtgaccgagaaacactacttatccatcagacattggttcaggtgggagaatctcgaagtagtacaaccctagaattggctcttctcaaccaaactgaaccacatcctcctatgttcggaacacttacctctcctcctaatgacgggatgtgtcaaagtgagcaagctatcgtttgcgctccatcttcggccgagcttgtggtgagtgccctggatcatacagcgggtgatcttggtttggatctacttcaattcctaaatactctagataacaccacgagtcccgaagaggaaaaacttgaaacagccgaaaccaaaaaggcacttgagacggtcagacagtttttgggttgtgatgtgagaatagtgacagaggctagttttctctctttgaaggaggcgattgaagtacttatttcagccaaacatttctcacaggtagaggcttatgaagttcatgctcgtttggctgttgtaaattttagtctctctccttgtctagaagcacaaaaagagtttgaagcaggcgagaagctgaaaagcgagtacgatgacattcgccagtccaccgatcttggccaactccagaagttgaagacttctttggacgaaggaaggcaaaaagtgcttgatctgaggaagcaagtcaaagtcacttcggccgccatccaaaacattgttccccaacaagatctcaccaagtatagctcgattctgtcatcggtcaagtcatataacaagaagaggggcatcttgaagcgaaaggtcgaccagggtatgcaagacttagaagatgttaaagaaactcttcggtcactcttgcccactgattag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

649

Amino Acids

72.14

Weight (kDa)

5.39

Isoelectric Point (pI)

39.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000063)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21382 FvH4_1g29794 FvH4_1g29795 FvH4_2g35573 FvH4_2g35574 FvH4_4g18552 FvH4_5g16044
malus_domestica MD05G1017000.v1.1
prunus_persica Prupe.3G140800_v2.0.a1 Prupe.6G164100_v2.0.a1
pyrus_communis pycom01g04330 pycom03g19820 pycom04g06720 pycom06g11360 pycom06g19000 pycom10g08100 pycom13g16660 pycom13g27590 pycom13g27640 pycom13g27890 pycom16g11770 pycom16g19530
rosa_chinensis RchiOBHm_Chr1g0317341 RchiOBHm_Chr1g0317351 RchiOBHm_Chr1g0320431 RchiOBHm_Chr1g0320711 RchiOBHm_Chr1g0320721 RchiOBHm_Chr1g0321611 RchiOBHm_Chr1g0321621 RchiOBHm_Chr1g0321631 RchiOBHm_Chr1g0323651 RchiOBHm_Chr1g0332991 RchiOBHm_Chr1g0333001 RchiOBHm_Chr1g0335981 RchiOBHm_Chr1g0335991 RchiOBHm_Chr1g0336001 RchiOBHm_Chr1g0350201 RchiOBHm_Chr1g0368201 RchiOBHm_Chr2g0105531 RchiOBHm_Chr2g0105541 RchiOBHm_Chr2g0116571 RchiOBHm_Chr2g0116581 RchiOBHm_Chr2g0121071 RchiOBHm_Chr2g0131351 RchiOBHm_Chr2g0131661 RchiOBHm_Chr2g0133021 RchiOBHm_Chr2g0138181 RchiOBHm_Chr2g0138191 RchiOBHm_Chr2g0142701 RchiOBHm_Chr2g0142711 RchiOBHm_Chr2g0152981 RchiOBHm_Chr3g0456181 RchiOBHm_Chr3g0456191 RchiOBHm_Chr3g0493631 RchiOBHm_Chr3g0496201 RchiOBHm_Chr4g0401541 RchiOBHm_Chr4g0410311 RchiOBHm_Chr4g0410321 RchiOBHm_Chr4g0419231 RchiOBHm_Chr4g0419511 RchiOBHm_Chr4g0419521 RchiOBHm_Chr5g0004311 RchiOBHm_Chr5g0004321 RchiOBHm_Chr5g0038131 RchiOBHm_Chr5g0038251 RchiOBHm_Chr5g0038261 RchiOBHm_Chr5g0038271 RchiOBHm_Chr5g0052241 RchiOBHm_Chr5g0053911 RchiOBHm_Chr5g0074641 RchiOBHm_Chr5g0076651 RchiOBHm_Chr5g0076661 RchiOBHm_Chr6g0249161 RchiOBHm_Chr6g0249171 RchiOBHm_Chr6g0250961 RchiOBHm_Chr6g0253701 RchiOBHm_Chr6g0262131 RchiOBHm_Chr6g0263181 RchiOBHm_Chr6g0263231 RchiOBHm_Chr6g0263241 RchiOBHm_Chr6g0263251 RchiOBHm_Chr6g0291271 RchiOBHm_Chr7g0194611 RchiOBHm_Chr7g0219691 RchiOBHm_Chr7g0219701 RchiOBHm_Chr7g0225431 RchiOBHm_Chr7g0234221 RchiOBHm_Chr7g0238711 RchiOBHm_Chr7g0238721 RchiOBHm_Chr7g0238731 RchiOBHm_Chr7g0239611 RchiOBHm_Chr7g0239621
rosa_laevigata RLG00000001361 RLG00000001376 RLG00000001860 RLG00000002051 RLG00000002362 RLG00000008940 RLG00000012764 RLG00000018782 RLG00000029639 RLG00000030151
rosa_multiflora Rmu_co8090794.1_g000001 Rmu_co8135356.1_g000001 Rmu_co8224968.1_g000001 Rmu_sc0000016.1_g000020 Rmu_sc0000029.1_g000061 Rmu_sc0000035.1_g000032 Rmu_sc0000060.1_g000041 Rmu_sc0000148.1_g000041 Rmu_sc0000315.1_g000084 Rmu_sc0000527.1_g000005 Rmu_sc0000527.1_g000007 Rmu_sc0000527.1_g000008 Rmu_sc0000648.1_g000002 Rmu_sc0000762.1_g000076 Rmu_sc0000870.1_g000003 Rmu_sc0000870.1_g000004 Rmu_sc0000948.1_g000037 Rmu_sc0000997.1_g000003 Rmu_sc0001047.1_g000041 Rmu_sc0001047.1_g000042 Rmu_sc0001075.1_g000044 Rmu_sc0001174.1_g000006 Rmu_sc0001235.1_g000025 Rmu_sc0001292.1_g000008 Rmu_sc0001301.1_g000038 Rmu_sc0001461.1_g000069 Rmu_sc0001461.1_g000070 Rmu_sc0001669.1_g000041 Rmu_sc0001689.1_g000027 Rmu_sc0001896.1_g000008 Rmu_sc0001909.1_g000013 Rmu_sc0002170.1_g000038 Rmu_sc0002200.1_g000014 Rmu_sc0002283.1_g000027 Rmu_sc0002284.1_g000014 Rmu_sc0002294.1_g000017 Rmu_sc0002294.1_g000018 Rmu_sc0002307.1_g000020 Rmu_sc0002307.1_g000021 Rmu_sc0002307.1_g000023 Rmu_sc0002357.1_g000054 Rmu_sc0002409.1_g000005 Rmu_sc0002535.1_g000002 Rmu_sc0002589.1_g000014 Rmu_sc0002759.1_g000016 Rmu_sc0002759.1_g000017 Rmu_sc0002777.1_g000015 Rmu_sc0002824.1_g000016 Rmu_sc0002872.1_g000005 Rmu_sc0002872.1_g000012 Rmu_sc0002872.1_g000013 Rmu_sc0002942.1_g000019 Rmu_sc0003337.1_g000001 Rmu_sc0003410.1_g000052 Rmu_sc0003445.1_g000010 Rmu_sc0003773.1_g000007 Rmu_sc0003773.1_g000008 Rmu_sc0003895.1_g000002 Rmu_sc0004063.1_g000006 Rmu_sc0004088.1_g000009 Rmu_sc0004088.1_g000010 Rmu_sc0004174.1_g000027 Rmu_sc0004196.1_g000010 Rmu_sc0004515.1_g000006 Rmu_sc0004727.1_g000010 Rmu_sc0004755.1_g000018 Rmu_sc0005016.1_g000030 Rmu_sc0005026.1_g000001 Rmu_sc0005044.1_g000007 Rmu_sc0005284.1_g000001 Rmu_sc0005431.1_g000030 Rmu_sc0005802.1_g000014 Rmu_sc0005802.1_g000015 Rmu_sc0005994.1_g000004 Rmu_sc0005994.1_g000005 Rmu_sc0006059.1_g000048 Rmu_sc0006583.1_g000013 Rmu_sc0006824.1_g000009 Rmu_sc0007458.1_g000005 Rmu_sc0007707.1_g000002 Rmu_sc0008242.1_g000012 Rmu_sc0008713.1_g000006 Rmu_sc0008770.1_g000008 Rmu_sc0009785.1_g000004 Rmu_sc0009785.1_g000005 Rmu_sc0010125.1_g000001 Rmu_sc0010211.1_g000004 Rmu_sc0011034.1_g000001 Rmu_sc0011833.1_g000006 Rmu_sc0014851.1_g000001 Rmu_sc0014899.1_g000001 Rmu_sc0015060.1_g000003 Rmu_sc0015186.1_g000001 Rmu_sc0015248.1_g000003 Rmu_sc0015248.1_g000004 Rmu_sc0015314.1_g000001 Rmu_sc0018098.1_g000002 Rmu_sc0022706.1_g000004 Rmu_sc0023350.1_g000002 Rmu_sc0027636.1_g000001 Rmu_sc0027672.1_g000003 Rmu_sc0030879.1_g000001 Rmu_ssc0000008.1_g000029 Rmu_ssc0000019.1_g000014 Rmu_ssc0000050.1_g000082 Rmu_ssc0000282.1_g000004 Rmu_ssc0000311.1_g000010
rosa_roxburghii Rroxscaffold_1G00015190 Rroxscaffold_1G00031880 Rroxscaffold_1G00031890 Rroxscaffold_1G00059310 Rroxscaffold_1G00060420 Rroxscaffold_1G00067930 Rroxscaffold_1G00075030 Rroxscaffold_2G00082210 Rroxscaffold_2G00122970 Rroxscaffold_3G00218230 Rroxscaffold_3G00219020 Rroxscaffold_3G00219030 Rroxscaffold_3G00223680 Rroxscaffold_3G00223690 Rroxscaffold_3G00223700 Rroxscaffold_3G00226870 Rroxscaffold_3G00226880 Rroxscaffold_3G00232990 Rroxscaffold_3G00265610 Rroxscaffold_3G00265620 Rroxscaffold_3G00265630 Rroxscaffold_4G00318660 Rroxscaffold_4G00319060 Rroxscaffold_4G00323500 Rroxscaffold_5G00357520 Rroxscaffold_5G00366150 Rroxscaffold_5G00377470 Rroxscaffold_6G00395700 Rroxscaffold_6G00413950 Rroxscaffold_7G00187650 Rroxscaffold_7G00198290 Rroxscaffold_7G00198300 Rroxscaffold_7G00208060
rosa_rugosa Rorug01G0173900 Rorug01G0174000 Rorug01G0174100 Rorug01G0174100 Rorug02G0341200 Rorug04G0135700 Rorug04G0135800 Rorug05G0032500 Rorug06G0021800
rosa_samantha Rh1AG036600 Rh1AG245800 Rh1CG021700 Rh1CG021800 Rh1CG085800 Rh1CG085900 Rh1CG187900 Rh1CG229600 Rh1CG239600 Rh1CG246500 Rh1CG246600 Rh2BG478100 Rh2DG341300 Rh2DG366600 Rh2DG375700 Rh2DG384300 Rh2DG487000 Rh2DG504000 Rh2DG504100 Rh3AG311800 Rh3AG327500 Rh3AG328300 Rh3BG345100 Rh3CG320100 Rh4AG005700 Rh4AG067900 Rh4AG068000 Rh4AG084400 Rh4AG106700 Rh4AG160000 Rh4AG173900 Rh4AG174000 Rh4CG125300 Rh4CG125500 Rh4CG264500 Rh4DG110800 Rh5AG047300 Rh5AG085200 Rh5AG126300 Rh5AG127300 Rh5AG203000 Rh5AG332400 Rh5AG332500 Rh5AG342400 Rh5AG344100 Rh5AG375600 Rh5AG378300 Rh5AG386000 Rh5AG529600 Rh5BG125200 Rh5CG137600 Rh5CG137700 Rh5DG125200 Rh6BG134100 Rh6BG175400 Rh6BG179500 Rh6BG179600 Rh6BG181600 Rh6BG181700 Rh6BG191100 Rh6BG232900 Rh6BG259700 Rh6BG259800 Rh7AG028000 Rh7AG319400 Rh7AG352700 Rh7AG352800 Rh7AG352900 Rh7AG482500 Rh7AG482600 Rh7AG503800 Rh7BG334700 Rh7CG200100 Rh7CG336200 Rh7CG370200 Rh7CG370400 Rh7CG370500
rosa_wichuraiana Rw1G001580 Rw1G003570 Rw1G004260 Rw1G004270 Rw1G021170 Rw2G019390 Rw2G040280 Rw2G044050 Rw4G004430 Rw5G010950 Rw5G018350 Rw5G032890 Rw6G002840 Rw6G006510 Rw6G007780 Rw6G033790 Rw7G036320 Rw7G040550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 54
AccB1I GGYRCC 1 cut(s) 245
AccI GTMKAC 3 cut(s) 503, 695, 1884
AccII CGCG 1 cut(s) 893
AciI CCGC 5 cut(s) 48, 893, 964, 1340, 1779
AclWI GGATC 6 cut(s) 208, 639, 652, 877, 1338, 1365
AcoI YGGCCR 7 cut(s) 10, 396, 861, 961, 1305, 1693, 1776
AcsI RAATTY 3 cut(s) 173, 742, 1594
AcvI CACGTG 1 cut(s) 1118
AcyI GRCGYC 1 cut(s) 876
AfaI GTAC 3 cut(s) 1180, 1527, 1664
AfiI CCNNNNNNNGG 6 cut(s) 255, 593, 892, 1192, 1232, 1259
AflIII ACRYGT 1 cut(s) 1047
AjiI CACGTC 1 cut(s) 296
AjnI CCWGG 2 cut(s) 1326, 1887
AjuI GAANNNNNNNTTGG 6 cut(s) 408, 440, 1703, 1735, 1779, 1811
AluBI AGCT 8 cut(s) 301, 494, 929, 1069, 1283, 1312, 1651, 1824
AluI AGCT 8 cut(s) 301, 494, 929, 1069, 1283, 1312, 1651, 1824
Alw26I GTCTC 3 cut(s) 216, 1439, 1607
AlwI GGATC 6 cut(s) 208, 639, 652, 877, 1338, 1365
Ama87I CYCGRG 1 cut(s) 219
ApeKI GCWGC 2 cut(s) 50, 554
ApoI RAATTY 3 cut(s) 173, 742, 1594
ArsI GACNNNNNNTTYG 2 cut(s) 773, 805
Asp700I GAANNNNTTC 1 cut(s) 1923
AspLEI GCGC 3 cut(s) 55, 893, 1295
AspS9I GGNCC 3 cut(s) 441, 543, 584
AsuHPI GGTGA 6 cut(s) 119, 884, 1040, 1330, 1355, 1804
AvaI CYCGRG 1 cut(s) 219
AvaII GGWCC 2 cut(s) 441, 543
BaeGI GKGCMC 2 cut(s) 816, 1327
BalI TGGCCA 1 cut(s) 1695
BamHI GGATCC 1 cut(s) 644
BanI GGYRCC 1 cut(s) 245
BauI CACGAG 1 cut(s) 1393
BbrPI CACGTG 1 cut(s) 1118
BbsI GAAGAC 1 cut(s) 1718
BbvI GCAGC 2 cut(s) 37, 541
BccI CCATC 7 cut(s) 362, 614, 803, 953, 1149, 1306, 1790
BceAI ACGGC 1 cut(s) 383
BciT130I CCWGG 2 cut(s) 1328, 1889
BclI TGATCA 2 cut(s) 466, 970
BcoDI GTCTC 3 cut(s) 216, 1439, 1607
BfaI CTAG 5 cut(s) 581, 1187, 1382, 1494, 1616
BglI GCCNNNNNGGC 1 cut(s) 243
BglII AGATCT 1 cut(s) 1807
BisI GCNGC 4 cut(s) 51, 555, 964, 1779
BlsI GCNGC 4 cut(s) 52, 556, 965, 1780
BmcAI AGTACT 1 cut(s) 1527
Bme1390I CCNGG 2 cut(s) 1328, 1889
Bme18I GGWCC 2 cut(s) 441, 543
BmeT110I CYCGRG 1 cut(s) 219
BmgBI CACGTC 1 cut(s) 296
BmgT120I GGNCC 3 cut(s) 441, 543, 584
BmiI GGNNCC 5 cut(s) 247, 544, 545, 586, 646
BmrFI CCNGG 2 cut(s) 1328, 1889
BmsI GCATC 4 cut(s) 808, 1065, 1102, 1875
BpiI GAAGAC 1 cut(s) 1718
BpmI CTGGAG 1 cut(s) 1685
BpuEI CTTGAG 2 cut(s) 161, 1463
BsaAI YACGTR 1 cut(s) 1118
BsaHI GRCGYC 1 cut(s) 876
BsaI GGTCTC 1 cut(s) 216
BsaJI CCNNGG 6 cut(s) 161, 249, 588, 1092, 1326, 1888
BsaXI ACNNNNNCTCC 2 cut(s) 1234, 1264
Bsc4I CCNNNNNNNGG 6 cut(s) 255, 593, 892, 1192, 1232, 1259
Bse1I ACTGG 2 cut(s) 874, 1678
BseBI CCWGG 2 cut(s) 1328, 1889
BseDI CCNNGG 6 cut(s) 161, 249, 588, 1092, 1326, 1888
BseGI GGATG 8 cut(s) 190, 625, 736, 811, 1102, 1219, 1269, 1782
BseLI CCNNNNNNNGG 6 cut(s) 255, 593, 892, 1192, 1232, 1259
BseMII CTCAG 2 cut(s) 401, 1742
BseNI ACTGG 2 cut(s) 874, 1678
BseRI GAGGAG 1 cut(s) 1239
BseSI GKGCMC 2 cut(s) 816, 1327
BseX3I CGGCCG 3 cut(s) 396, 1305, 1776
BseXI GCAGC 2 cut(s) 37, 541
BseYI CCCAGC 1 cut(s) 539
BsgI GTGCAG 1 cut(s) 1025
Bsh1236I CGCG 1 cut(s) 893
Bsh1285I CGRYCG 3 cut(s) 399, 1308, 1779
BshNI GGYRCC 1 cut(s) 245
BsiEI CGRYCG 3 cut(s) 399, 1308, 1779
BsiHKCI CYCGRG 1 cut(s) 219
BsiSI CCGG 2 cut(s) 323, 444
BslFI GGGAC 2 cut(s) 556, 1383
BslI CCNNNNNNNGG 6 cut(s) 255, 593, 892, 1192, 1232, 1259
BsmAI GTCTC 3 cut(s) 216, 1439, 1607
BsmBI CGTCTC 1 cut(s) 1439
BsmFI GGGAC 2 cut(s) 556, 1383
Bso31I GGTCTC 1 cut(s) 216
BsoBI CYCGRG 1 cut(s) 219
Bsp1286I GDGCHC 2 cut(s) 816, 1327
Bsp19I CCATGG 1 cut(s) 161
BspACI CCGC 5 cut(s) 48, 893, 964, 1340, 1779
BspCNI CTCAG 2 cut(s) 400, 1743
BspFNI CGCG 1 cut(s) 893
BspHI TCATGA 1 cut(s) 513
BspLI GGNNCC 5 cut(s) 247, 544, 545, 586, 646
BspPI GGATC 6 cut(s) 208, 639, 652, 877, 1338, 1365
BspQI GCTCTTC 2 cut(s) 411, 1203
BspT107I GGYRCC 1 cut(s) 245
BspTNI GGTCTC 1 cut(s) 216
BsrI ACTGG 2 cut(s) 874, 1678
BssECI CCNNGG 6 cut(s) 161, 249, 588, 1092, 1326, 1888
BssNAI GTATAC 1 cut(s) 696
BssNI GRCGYC 1 cut(s) 876
BssSI CACGAG 1 cut(s) 1393
BssT1I CCWWGG 3 cut(s) 161, 588, 1092
Bst1107I GTATAC 1 cut(s) 696
Bst2BI CACGAG 1 cut(s) 1393
Bst2UI CCWGG 2 cut(s) 1328, 1889
Bst4CI ACNGT 3 cut(s) 250, 1450, 1458
Bst6I CTCTTC 5 cut(s) 411, 1203, 1398, 1853, 1929
BstACI GRCGYC 1 cut(s) 876
BstAPI GCANNNNNTGC 1 cut(s) 1741
BstBAI YACGTR 1 cut(s) 1118
BstC8I GCNNGC 3 cut(s) 1071, 1281, 1642
BstDEI CTNAG 3 cut(s) 387, 1751, 1903
BstDSI CCRYGG 2 cut(s) 161, 249
BstF5I GGATG 8 cut(s) 190, 625, 736, 811, 1102, 1219, 1269, 1782
BstFNI CGCG 1 cut(s) 893
BstHHI GCGC 3 cut(s) 55, 893, 1295
BstMAI GTCTC 3 cut(s) 216, 1439, 1607
BstMCI CGRYCG 3 cut(s) 399, 1308, 1779
BstMWI GCNNNNNNNGC 4 cut(s) 243, 899, 1583, 1741
BstNI CCWGG 2 cut(s) 1328, 1889
BstSCI CCNGG 2 cut(s) 1326, 1887
BstSLI GKGCMC 2 cut(s) 816, 1327
BstUI CGCG 1 cut(s) 893
BstV1I GCAGC 2 cut(s) 37, 541
BstV2I GAAGAC 1 cut(s) 1718
BstX2I RGATCY 3 cut(s) 644, 1357, 1807
BstYI RGATCY 3 cut(s) 644, 1357, 1807
BstZ17I GTATAC 1 cut(s) 696
BstZI CGGCCG 3 cut(s) 396, 1305, 1776
BtgI CCRYGG 2 cut(s) 161, 249
BtrI CACGTC 1 cut(s) 296
BtsCI GGATG 8 cut(s) 190, 625, 736, 811, 1102, 1219, 1269, 1782
BtsI GCAGTG 1 cut(s) 62
BtsIMutI CAGTG 3 cut(s) 62, 395, 1941
Cac8I GCNNGC 3 cut(s) 1071, 1281, 1642
CciI TCATGA 1 cut(s) 513
CfoI GCGC 3 cut(s) 55, 893, 1295
Cfr13I GGNCC 3 cut(s) 441, 543, 584
CseI GACGC 1 cut(s) 884
Csp6I GTAC 3 cut(s) 1179, 1526, 1663
CspCI CAANNNNNGTGG 4 cut(s) 479, 514, 1672, 1707
CviAII CATG 6 cut(s) 162, 360, 514, 1000, 1015, 1574
CviQI GTAC 3 cut(s) 1179, 1526, 1663
DdeI CTNAG 3 cut(s) 387, 1751, 1903
EaeI YGGCCR 7 cut(s) 10, 396, 861, 961, 1305, 1693, 1776
EagI CGGCCG 3 cut(s) 396, 1305, 1776
Eam1104I CTCTTC 5 cut(s) 411, 1203, 1398, 1853, 1929
EarI CTCTTC 5 cut(s) 411, 1203, 1398, 1853, 1929
EclXI CGGCCG 3 cut(s) 396, 1305, 1776
Eco130I CCWWGG 3 cut(s) 161, 588, 1092
Eco31I GGTCTC 1 cut(s) 216
Eco47I GGWCC 2 cut(s) 441, 543
Eco52I CGGCCG 3 cut(s) 396, 1305, 1776
Eco72I CACGTG 1 cut(s) 1118
Eco88I CYCGRG 1 cut(s) 219
EcoO109I RGGNCCY 2 cut(s) 543, 584
EcoRI GAATTC 1 cut(s) 742
EcoRII CCWGG 2 cut(s) 1326, 1887
EcoT14I CCWWGG 3 cut(s) 161, 588, 1092
ErhI CCWWGG 3 cut(s) 161, 588, 1092
Esp3I CGTCTC 1 cut(s) 1439
FaeI CATG 6 cut(s) 165, 363, 517, 1003, 1018, 1577
FalI AAGNNNNNCTT 2 cut(s) 1908, 1940
FaqI GGGAC 2 cut(s) 556, 1383
FatI CATG 6 cut(s) 161, 359, 513, 999, 1014, 1573
FauI CCCGC 1 cut(s) 1333
FauNDI CATATG 1 cut(s) 110
FbaI TGATCA 2 cut(s) 466, 970
FblI GTMKAC 3 cut(s) 503, 695, 1884
Fnu4HI GCNGC 4 cut(s) 51, 555, 964, 1779
FokI GGATG 8 cut(s) 197, 632, 743, 818, 1109, 1206, 1276, 1769
Fsp4HI GCNGC 4 cut(s) 51, 555, 964, 1779
FspBI CTAG 5 cut(s) 581, 1187, 1382, 1494, 1616
FspI TGCGCA 1 cut(s) 54
GlaI GCGC 3 cut(s) 54, 892, 1294
GluI GCNGC 4 cut(s) 51, 555, 964, 1779
GsaI CCCAGC 1 cut(s) 543
GsuI CTGGAG 1 cut(s) 1685
HapII CCGG 2 cut(s) 323, 444
HgaI GACGC 1 cut(s) 884
HhaI GCGC 3 cut(s) 55, 893, 1295
Hin1I GRCGYC 1 cut(s) 876
Hin1II CATG 6 cut(s) 165, 363, 517, 1003, 1018, 1577
Hin6I GCGC 3 cut(s) 53, 891, 1293
HinP1I GCGC 3 cut(s) 53, 891, 1293
HincII GTYRAC 2 cut(s) 504, 1885
HindII GTYRAC 2 cut(s) 504, 1885
HindIII AAGCTT 1 cut(s) 492
HinfI GANTC 5 cut(s) 190, 896, 1166, 1396, 1828
HpaII CCGG 2 cut(s) 323, 444
HphI GGTGA 6 cut(s) 119, 884, 1040, 1330, 1355, 1804
Hpy166II GTNNAC 5 cut(s) 375, 504, 696, 1683, 1885
Hpy8I GTNNAC 5 cut(s) 375, 504, 696, 1683, 1885
Hpy99I CGWCG 1 cut(s) 763
HpyAV CCTTC 6 cut(s) 141, 587, 905, 1504, 1721, 1725
HpyCH4III ACNGT 3 cut(s) 250, 1450, 1458
HpyCH4IV ACGT 6 cut(s) 295, 550, 676, 842, 1049, 1117
HpyCH4V TGCA 5 cut(s) 293, 557, 1042, 1115, 1897
HpyF10VI GCNNNNNNNGC 4 cut(s) 243, 899, 1583, 1741
HpyF3I CTNAG 3 cut(s) 387, 1751, 1903
HpySE526I ACGT 6 cut(s) 295, 550, 676, 842, 1049, 1117
Hsp92I GRCGYC 1 cut(s) 876
Hsp92II CATG 6 cut(s) 165, 363, 517, 1003, 1018, 1577
HspAI GCGC 3 cut(s) 53, 891, 1293
KflI GGGWCCC 1 cut(s) 543
Ksp22I TGATCA 2 cut(s) 466, 970
LguI GCTCTTC 2 cut(s) 411, 1203
LmnI GCTCC 1 cut(s) 1300
Lsp1109I GCAGC 2 cut(s) 37, 541
LweI GCATC 4 cut(s) 808, 1065, 1102, 1875
MaeI CTAG 5 cut(s) 581, 1187, 1382, 1494, 1616
MaeII ACGT 6 cut(s) 295, 550, 676, 842, 1049, 1117
MaeIII GTNAC 8 cut(s) 113, 404, 748, 872, 1118, 1483, 1768, 1929
MflI RGATCY 3 cut(s) 644, 1357, 1807
MhlI GDGCHC 2 cut(s) 816, 1327
MlsI TGGCCA 1 cut(s) 1695
MluCI AATT 9 cut(s) 173, 179, 283, 422, 742, 849, 1190, 1367, 1594
MluNI TGGCCA 1 cut(s) 1695
MlyI GAGTC 2 cut(s) 890, 1405
Mox20I TGGCCA 1 cut(s) 1695
MroXI GAANNNNTTC 1 cut(s) 1923
MscI TGGCCA 1 cut(s) 1695
MseI TTAA 2 cut(s) 629, 1914
Msp20I TGGCCA 1 cut(s) 1695
MspA1I CMGCKG 2 cut(s) 50, 1340
MspI CCGG 2 cut(s) 323, 444
MspR9I CCNGG 2 cut(s) 1328, 1889
MvaI CCWGG 2 cut(s) 1328, 1889
MvnI CGCG 1 cut(s) 893
MwoI GCNNNNNNNGC 4 cut(s) 243, 899, 1583, 1741
NcoI CCATGG 1 cut(s) 161
NdeI CATATG 1 cut(s) 110
NlaIII CATG 6 cut(s) 165, 363, 517, 1003, 1018, 1577
NlaIV GGNNCC 5 cut(s) 247, 544, 545, 586, 646
NmeAIII GCCGAG 3 cut(s) 146, 878, 1333
NmuCI GTSAC 6 cut(s) 748, 872, 1118, 1483, 1768, 1929
NsbI TGCGCA 1 cut(s) 54
PaeR7I CTCGAG 1 cut(s) 219
PagI TCATGA 1 cut(s) 513
PciSI GCTCTTC 2 cut(s) 411, 1203
PdmI GAANNNNTTC 1 cut(s) 1923
PfeI GAWTC 3 cut(s) 190, 1166, 1828
PflFI GACNNNGTC 1 cut(s) 88
PkrI GCNGC 4 cut(s) 52, 556, 965, 1780
PleI GAGTC 2 cut(s) 890, 1404
PmaCI CACGTG 1 cut(s) 1118
PmlI CACGTG 1 cut(s) 1118
PpsI GAGTC 2 cut(s) 890, 1404
Ppu21I YACGTR 1 cut(s) 1118
PpuMI RGGWCCY 1 cut(s) 543
Psp5II RGGWCCY 1 cut(s) 543
Psp6I CCWGG 2 cut(s) 1326, 1887
PspCI CACGTG 1 cut(s) 1118
PspFI CCCAGC 1 cut(s) 539
PspGI CCWGG 2 cut(s) 1326, 1887
PspN4I GGNNCC 5 cut(s) 247, 544, 545, 586, 646
PspPI GGNCC 3 cut(s) 441, 543, 584
PspPPI RGGWCCY 1 cut(s) 543
PsuI RGATCY 3 cut(s) 644, 1357, 1807
PsyI GACNNNGTC 1 cut(s) 88
RsaI GTAC 3 cut(s) 1180, 1527, 1664
RsaNI GTAC 3 cut(s) 1179, 1526, 1663
SalI GTCGAC 2 cut(s) 502, 1883
SapI GCTCTTC 2 cut(s) 411, 1203
SaqAI TTAA 2 cut(s) 629, 1914
SatI GCNGC 4 cut(s) 51, 555, 964, 1779
Sau96I GGNCC 3 cut(s) 441, 543, 584
ScaI AGTACT 1 cut(s) 1527
SchI GAGTC 2 cut(s) 890, 1405
ScrFI CCNGG 2 cut(s) 1328, 1889
SduI GDGCHC 2 cut(s) 816, 1327
SfaNI GCATC 4 cut(s) 808, 1065, 1102, 1875
Sfr274I CTCGAG 1 cut(s) 219
SinI GGWCC 2 cut(s) 441, 543
SlaI CTCGAG 1 cut(s) 219
SmlI CTYRAG 3 cut(s) 140, 219, 1442
SmoI CTYRAG 3 cut(s) 140, 219, 1442
Sse9I AATT 9 cut(s) 173, 179, 283, 422, 742, 849, 1190, 1367, 1594
SsiI CCGC 5 cut(s) 48, 893, 964, 1340, 1779
SspMI CTAG 5 cut(s) 581, 1187, 1382, 1494, 1616
StyD4I CCNGG 2 cut(s) 1326, 1887
StyI CCWWGG 3 cut(s) 161, 588, 1092
TaaI ACNGT 3 cut(s) 250, 1450, 1458
TaiI ACGT 6 cut(s) 298, 553, 679, 845, 1052, 1120
TaqI TCGA 8 cut(s) 220, 503, 668, 881, 1059, 1171, 1826, 1884
TaqII GACCGA 4 cut(s) 736, 1137, 1828, 1917
TasI AATT 9 cut(s) 173, 179, 283, 422, 742, 849, 1190, 1367, 1594
TatI WGTACW 2 cut(s) 1178, 1525
TauI GCSGC 2 cut(s) 966, 1781
TfiI GAWTC 3 cut(s) 190, 1166, 1828
Tru1I TTAA 2 cut(s) 629, 1914
Tru9I TTAA 2 cut(s) 629, 1914
TscAI CASTG 3 cut(s) 62, 395, 1948
TseFI GTSAC 6 cut(s) 748, 872, 1118, 1483, 1768, 1929
TseI GCWGC 2 cut(s) 50, 554
Tsp45I GTSAC 6 cut(s) 748, 872, 1118, 1483, 1768, 1929
TspDTI ATGAA 5 cut(s) 298, 429, 530, 1562, 1581
TspGWI ACGGA 1 cut(s) 776
TspRI CASTG 3 cut(s) 62, 395, 1948
Tth111I GACNNNGTC 1 cut(s) 88
VpaK11BI GGWCC 2 cut(s) 441, 543
XapI RAATTY 3 cut(s) 173, 742, 1594
XbaI TCTAGA 2 cut(s) 1381, 1615
XhoI CTCGAG 1 cut(s) 219
XmiI GTMKAC 3 cut(s) 503, 695, 1884
XmnI GAANNNNTTC 1 cut(s) 1923
XspI CTAG 5 cut(s) 581, 1187, 1382, 1494, 1616
ZrmI AGTACT 1 cut(s) 1527
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.