RchiOBHm_Chr5g0074641

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000063
Physical Location & Seq
Forward (+)
80576547 .. 80577667
1121 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ34942

Sequence Viewer

Length: 936 bp
ATGATGAATTTGCAGAAGGCCAACGTCCAAAATGCCATTCCTAGTGAAATAGAGGAATCCGTGGAACTAACCATTGATAAAGATGGCCACCCGAGTAGTGACGAACCTGTGGGGGAGATAATTTCTCTTGAAAGAATGGCTGAAAGCGAAGTTGTGACAATGAATATGGAAGAGACACTTGTGCTCACCCAAACTTCAACGCAAGCCAGTATTCCCTCCTCGTCGCTTAGTGAGCAACACCTGGTGTTGGCTAATGAACTAGAAGGTAATCAAGGGTTTGAAGCCGAACTTCAGGCTTTCATGAGGGCATTTTCGGCCGATGCTCTAATCCAACCAGAATGCTGCTCGGCCATTTCGCAGTTACCAACCGCGCAATTGACATCAAGGGAGGAAGTTGATAGGGCTCTGAAGGTGGTAAAGGAAACGTTAGCGCAGCCATTAAAAGAATTTGTGGAAACAGGCCAACTATCAAAAGTGAAAGTGGCCATGGACTTGTTACTTGGAGCCAAATACTTTGCCCCTCCCAAGGTAGCTCTCATTGGTGAGAAGCTAGAAGTGTTGACCCAACAAATATCCCGTGTAGCTGGTTCATACCAAGAAATAGAAAAAAGGAGACAACAAATCTTGGCTTGTGAGCAAATGAAGAAAGCCTTGGTTCCCGAGTTTGGGTGGTGTATGGAACAAAAACGGGTTGTGGAGTCTCTTGAAGGCAAGATAAATGAGTTGGAAAGACAATTGGCATCCTTGAAACAAGAGAGACAAGAAGTGGGGGAAAAGCTCCTTCAAAGGAGTAAGCAGTGTTTCCAAAGCCAAGGACAACTGAAAAAAATAGAGGCCGAATTGAAAAATTCCGAGCCTAGGTGTATGCAACTTGAGAGTGACCTTCAAGACACTAGTTGTACCTTGGGAGCTCTTAAAGCTTTATTAGCCGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

311

Amino Acids

34.62

Weight (kDa)

4.85

Isoelectric Point (pI)

54.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000063)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21382 FvH4_1g29794 FvH4_1g29795 FvH4_2g35573 FvH4_2g35574 FvH4_4g18552 FvH4_5g16044
malus_domestica MD05G1017000.v1.1
prunus_persica Prupe.3G140800_v2.0.a1 Prupe.6G164100_v2.0.a1
pyrus_communis pycom01g04330 pycom03g19820 pycom04g06720 pycom06g11360 pycom06g19000 pycom10g08100 pycom13g16660 pycom13g27590 pycom13g27640 pycom13g27890 pycom16g11770 pycom16g19530
rosa_chinensis RchiOBHm_Chr1g0317341 RchiOBHm_Chr1g0317351 RchiOBHm_Chr1g0320431 RchiOBHm_Chr1g0320711 RchiOBHm_Chr1g0320721 RchiOBHm_Chr1g0321611 RchiOBHm_Chr1g0321621 RchiOBHm_Chr1g0321631 RchiOBHm_Chr1g0323651 RchiOBHm_Chr1g0332991 RchiOBHm_Chr1g0333001 RchiOBHm_Chr1g0335981 RchiOBHm_Chr1g0335991 RchiOBHm_Chr1g0336001 RchiOBHm_Chr1g0350201 RchiOBHm_Chr1g0368201 RchiOBHm_Chr2g0105531 RchiOBHm_Chr2g0105541 RchiOBHm_Chr2g0116571 RchiOBHm_Chr2g0116581 RchiOBHm_Chr2g0121071 RchiOBHm_Chr2g0131351 RchiOBHm_Chr2g0131661 RchiOBHm_Chr2g0133021 RchiOBHm_Chr2g0138181 RchiOBHm_Chr2g0138191 RchiOBHm_Chr2g0142701 RchiOBHm_Chr2g0142711 RchiOBHm_Chr2g0152981 RchiOBHm_Chr3g0456181 RchiOBHm_Chr3g0456191 RchiOBHm_Chr3g0493631 RchiOBHm_Chr3g0496201 RchiOBHm_Chr4g0401541 RchiOBHm_Chr4g0410311 RchiOBHm_Chr4g0410321 RchiOBHm_Chr4g0419231 RchiOBHm_Chr4g0419511 RchiOBHm_Chr4g0419521 RchiOBHm_Chr5g0004311 RchiOBHm_Chr5g0004321 RchiOBHm_Chr5g0038131 RchiOBHm_Chr5g0038251 RchiOBHm_Chr5g0038261 RchiOBHm_Chr5g0038271 RchiOBHm_Chr5g0052241 RchiOBHm_Chr5g0053911 RchiOBHm_Chr5g0074641 RchiOBHm_Chr5g0076651 RchiOBHm_Chr5g0076661 RchiOBHm_Chr6g0249161 RchiOBHm_Chr6g0249171 RchiOBHm_Chr6g0250961 RchiOBHm_Chr6g0253701 RchiOBHm_Chr6g0262131 RchiOBHm_Chr6g0263181 RchiOBHm_Chr6g0263231 RchiOBHm_Chr6g0263241 RchiOBHm_Chr6g0263251 RchiOBHm_Chr6g0291271 RchiOBHm_Chr7g0194611 RchiOBHm_Chr7g0219691 RchiOBHm_Chr7g0219701 RchiOBHm_Chr7g0225431 RchiOBHm_Chr7g0234221 RchiOBHm_Chr7g0238711 RchiOBHm_Chr7g0238721 RchiOBHm_Chr7g0238731 RchiOBHm_Chr7g0239611 RchiOBHm_Chr7g0239621
rosa_laevigata RLG00000001361 RLG00000001376 RLG00000001860 RLG00000002051 RLG00000002362 RLG00000008940 RLG00000012764 RLG00000018782 RLG00000029639 RLG00000030151
rosa_multiflora Rmu_co8090794.1_g000001 Rmu_co8135356.1_g000001 Rmu_co8224968.1_g000001 Rmu_sc0000016.1_g000020 Rmu_sc0000029.1_g000061 Rmu_sc0000035.1_g000032 Rmu_sc0000060.1_g000041 Rmu_sc0000148.1_g000041 Rmu_sc0000315.1_g000084 Rmu_sc0000527.1_g000005 Rmu_sc0000527.1_g000007 Rmu_sc0000527.1_g000008 Rmu_sc0000648.1_g000002 Rmu_sc0000762.1_g000076 Rmu_sc0000870.1_g000003 Rmu_sc0000870.1_g000004 Rmu_sc0000948.1_g000037 Rmu_sc0000997.1_g000003 Rmu_sc0001047.1_g000041 Rmu_sc0001047.1_g000042 Rmu_sc0001075.1_g000044 Rmu_sc0001174.1_g000006 Rmu_sc0001235.1_g000025 Rmu_sc0001292.1_g000008 Rmu_sc0001301.1_g000038 Rmu_sc0001461.1_g000069 Rmu_sc0001461.1_g000070 Rmu_sc0001669.1_g000041 Rmu_sc0001689.1_g000027 Rmu_sc0001896.1_g000008 Rmu_sc0001909.1_g000013 Rmu_sc0002170.1_g000038 Rmu_sc0002200.1_g000014 Rmu_sc0002283.1_g000027 Rmu_sc0002284.1_g000014 Rmu_sc0002294.1_g000017 Rmu_sc0002294.1_g000018 Rmu_sc0002307.1_g000020 Rmu_sc0002307.1_g000021 Rmu_sc0002307.1_g000023 Rmu_sc0002357.1_g000054 Rmu_sc0002409.1_g000005 Rmu_sc0002535.1_g000002 Rmu_sc0002589.1_g000014 Rmu_sc0002759.1_g000016 Rmu_sc0002759.1_g000017 Rmu_sc0002777.1_g000015 Rmu_sc0002824.1_g000016 Rmu_sc0002872.1_g000005 Rmu_sc0002872.1_g000012 Rmu_sc0002872.1_g000013 Rmu_sc0002942.1_g000019 Rmu_sc0003337.1_g000001 Rmu_sc0003410.1_g000052 Rmu_sc0003445.1_g000010 Rmu_sc0003773.1_g000007 Rmu_sc0003773.1_g000008 Rmu_sc0003895.1_g000002 Rmu_sc0004063.1_g000006 Rmu_sc0004088.1_g000009 Rmu_sc0004088.1_g000010 Rmu_sc0004174.1_g000027 Rmu_sc0004196.1_g000010 Rmu_sc0004515.1_g000006 Rmu_sc0004727.1_g000010 Rmu_sc0004755.1_g000018 Rmu_sc0005016.1_g000030 Rmu_sc0005026.1_g000001 Rmu_sc0005044.1_g000007 Rmu_sc0005284.1_g000001 Rmu_sc0005431.1_g000030 Rmu_sc0005802.1_g000014 Rmu_sc0005802.1_g000015 Rmu_sc0005994.1_g000004 Rmu_sc0005994.1_g000005 Rmu_sc0006059.1_g000048 Rmu_sc0006583.1_g000013 Rmu_sc0006824.1_g000009 Rmu_sc0007458.1_g000005 Rmu_sc0007707.1_g000002 Rmu_sc0008242.1_g000012 Rmu_sc0008713.1_g000006 Rmu_sc0008770.1_g000008 Rmu_sc0009785.1_g000004 Rmu_sc0009785.1_g000005 Rmu_sc0010125.1_g000001 Rmu_sc0010211.1_g000004 Rmu_sc0011034.1_g000001 Rmu_sc0011833.1_g000006 Rmu_sc0014851.1_g000001 Rmu_sc0014899.1_g000001 Rmu_sc0015060.1_g000003 Rmu_sc0015186.1_g000001 Rmu_sc0015248.1_g000003 Rmu_sc0015248.1_g000004 Rmu_sc0015314.1_g000001 Rmu_sc0018098.1_g000002 Rmu_sc0022706.1_g000004 Rmu_sc0023350.1_g000002 Rmu_sc0027636.1_g000001 Rmu_sc0027672.1_g000003 Rmu_sc0030879.1_g000001 Rmu_ssc0000008.1_g000029 Rmu_ssc0000019.1_g000014 Rmu_ssc0000050.1_g000082 Rmu_ssc0000282.1_g000004 Rmu_ssc0000311.1_g000010
rosa_roxburghii Rroxscaffold_1G00015190 Rroxscaffold_1G00031880 Rroxscaffold_1G00031890 Rroxscaffold_1G00059310 Rroxscaffold_1G00060420 Rroxscaffold_1G00067930 Rroxscaffold_1G00075030 Rroxscaffold_2G00082210 Rroxscaffold_2G00122970 Rroxscaffold_3G00218230 Rroxscaffold_3G00219020 Rroxscaffold_3G00219030 Rroxscaffold_3G00223680 Rroxscaffold_3G00223690 Rroxscaffold_3G00223700 Rroxscaffold_3G00226870 Rroxscaffold_3G00226880 Rroxscaffold_3G00232990 Rroxscaffold_3G00265610 Rroxscaffold_3G00265620 Rroxscaffold_3G00265630 Rroxscaffold_4G00318660 Rroxscaffold_4G00319060 Rroxscaffold_4G00323500 Rroxscaffold_5G00357520 Rroxscaffold_5G00366150 Rroxscaffold_5G00377470 Rroxscaffold_6G00395700 Rroxscaffold_6G00413950 Rroxscaffold_7G00187650 Rroxscaffold_7G00198290 Rroxscaffold_7G00198300 Rroxscaffold_7G00208060
rosa_rugosa Rorug01G0173900 Rorug01G0174000 Rorug01G0174100 Rorug01G0174100 Rorug02G0341200 Rorug04G0135700 Rorug04G0135800 Rorug05G0032500 Rorug06G0021800
rosa_samantha Rh1AG036600 Rh1AG245800 Rh1CG021700 Rh1CG021800 Rh1CG085800 Rh1CG085900 Rh1CG187900 Rh1CG229600 Rh1CG239600 Rh1CG246500 Rh1CG246600 Rh2BG478100 Rh2DG341300 Rh2DG366600 Rh2DG375700 Rh2DG384300 Rh2DG487000 Rh2DG504000 Rh2DG504100 Rh3AG311800 Rh3AG327500 Rh3AG328300 Rh3BG345100 Rh3CG320100 Rh4AG005700 Rh4AG067900 Rh4AG068000 Rh4AG084400 Rh4AG106700 Rh4AG160000 Rh4AG173900 Rh4AG174000 Rh4CG125300 Rh4CG125500 Rh4CG264500 Rh4DG110800 Rh5AG047300 Rh5AG085200 Rh5AG126300 Rh5AG127300 Rh5AG203000 Rh5AG332400 Rh5AG332500 Rh5AG342400 Rh5AG344100 Rh5AG375600 Rh5AG378300 Rh5AG386000 Rh5AG529600 Rh5BG125200 Rh5CG137600 Rh5CG137700 Rh5DG125200 Rh6BG134100 Rh6BG175400 Rh6BG179500 Rh6BG179600 Rh6BG181600 Rh6BG181700 Rh6BG191100 Rh6BG232900 Rh6BG259700 Rh6BG259800 Rh7AG028000 Rh7AG319400 Rh7AG352700 Rh7AG352800 Rh7AG352900 Rh7AG482500 Rh7AG482600 Rh7AG503800 Rh7BG334700 Rh7CG200100 Rh7CG336200 Rh7CG370200 Rh7CG370400 Rh7CG370500
rosa_wichuraiana Rw1G001580 Rw1G003570 Rw1G004260 Rw1G004270 Rw1G021170 Rw2G019390 Rw2G040280 Rw2G044050 Rw4G004430 Rw5G010950 Rw5G018350 Rw5G032890 Rw6G002840 Rw6G006510 Rw6G007780 Rw6G033790 Rw7G036320 Rw7G040550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 371
AciI CCGC 1 cut(s) 369
AclI AACGTT 1 cut(s) 425
AcoI YGGCCR 4 cut(s) 85, 315, 348, 483
AcsI RAATTY 3 cut(s) 7, 446, 847
AcuI CTGAAG 2 cut(s) 275, 428
AdeI CACNNNGTG 1 cut(s) 244
AfaI GTAC 1 cut(s) 901
AfiI CCNNNNNNNGG 5 cut(s) 247, 526, 665, 666, 858
AgsI TTSAA 8 cut(s) 131, 198, 281, 707, 748, 785, 844, 887
AhlI ACTAGT 1 cut(s) 893
AjnI CCWGG 1 cut(s) 240
AjuI GAANNNNNNNTTGG 4 cut(s) 21, 53, 635, 667
AluBI AGCT 6 cut(s) 533, 550, 584, 778, 911, 920
AluI AGCT 6 cut(s) 533, 550, 584, 778, 911, 920
Alw21I GWGCWC 2 cut(s) 186, 913
Alw26I GTCTC 4 cut(s) 167, 607, 705, 751
Ama87I CYCGRG 2 cut(s) 91, 659
AoxI GGCC 7 cut(s) 18, 85, 315, 348, 460, 483, 834
ApeKI GCWGC 2 cut(s) 342, 433
ApoI RAATTY 3 cut(s) 7, 446, 847
AspA2I CCTAGG 1 cut(s) 857
AspLEI GCGC 2 cut(s) 373, 433
AsuHPI GGTGA 2 cut(s) 178, 554
AvaI CYCGRG 2 cut(s) 91, 659
AvrII CCTAGG 1 cut(s) 857
BalI TGGCCA 2 cut(s) 87, 485
BanII GRGCYC 2 cut(s) 406, 913
Bbv12I GWGCWC 2 cut(s) 186, 913
BbvI GCAGC 2 cut(s) 329, 445
BccI CCATC 1 cut(s) 77
BciT130I CCWGG 1 cut(s) 242
BcoDI GTCTC 4 cut(s) 167, 607, 705, 751
BcuI ACTAGT 1 cut(s) 893
BfaI CTAG 5 cut(s) 42, 260, 551, 858, 894
BisI GCNGC 2 cut(s) 343, 434
BlnI CCTAGG 1 cut(s) 857
BlsI GCNGC 2 cut(s) 344, 435
Bme1390I CCNGG 1 cut(s) 242
BmeT110I CYCGRG 2 cut(s) 91, 659
BmiI GGNNCC 2 cut(s) 505, 657
BmrFI CCNGG 1 cut(s) 242
BmsI GCATC 2 cut(s) 310, 749
BpuEI CTTGAG 1 cut(s) 893
BsaJI CCNNGG 7 cut(s) 60, 486, 525, 651, 811, 857, 903
Bsc4I CCNNNNNNNGG 5 cut(s) 247, 526, 665, 666, 858
Bse1I ACTGG 1 cut(s) 207
BseBI CCWGG 1 cut(s) 242
BseDI CCNNGG 7 cut(s) 60, 486, 525, 651, 811, 857, 903
BseGI GGATG 1 cut(s) 740
BseLI CCNNNNNNNGG 5 cut(s) 247, 526, 665, 666, 858
BseNI ACTGG 1 cut(s) 207
BseRI GAGGAG 1 cut(s) 208
BseX3I CGGCCG 1 cut(s) 315
BseXI GCAGC 2 cut(s) 329, 445
Bsh1236I CGCG 1 cut(s) 371
Bsh1285I CGRYCG 1 cut(s) 318
BshFI GGCC 7 cut(s) 20, 87, 317, 350, 462, 485, 836
BsiEI CGRYCG 1 cut(s) 318
BsiHKAI GWGCWC 2 cut(s) 186, 913
BsiHKCI CYCGRG 2 cut(s) 91, 659
BslI CCNNNNNNNGG 5 cut(s) 247, 526, 665, 666, 858
BsmAI GTCTC 4 cut(s) 167, 607, 705, 751
BsmI GAATGC 1 cut(s) 344
BsnI GGCC 7 cut(s) 20, 87, 317, 350, 462, 485, 836
BsoBI CYCGRG 2 cut(s) 91, 659
Bsp1286I GDGCHC 3 cut(s) 186, 406, 913
Bsp19I CCATGG 1 cut(s) 486
BspACI CCGC 1 cut(s) 369
BspANI GGCC 7 cut(s) 20, 87, 317, 350, 462, 485, 836
BspFNI CGCG 1 cut(s) 371
BspHI TCATGA 1 cut(s) 300
BspLI GGNNCC 2 cut(s) 505, 657
BsrI ACTGG 1 cut(s) 207
BssECI CCNNGG 7 cut(s) 60, 486, 525, 651, 811, 857, 903
BssT1I CCWWGG 6 cut(s) 486, 525, 651, 811, 857, 903
Bst2UI CCWGG 1 cut(s) 242
Bst6I CTCTTC 1 cut(s) 165
BstC8I GCNNGC 1 cut(s) 204
BstDEI CTNAG 1 cut(s) 227
BstDSI CCRYGG 2 cut(s) 60, 486
BstF5I GGATG 1 cut(s) 740
BstFNI CGCG 1 cut(s) 371
BstHHI GCGC 2 cut(s) 373, 433
BstMAI GTCTC 4 cut(s) 167, 607, 705, 751
BstMCI CGRYCG 1 cut(s) 318
BstMWI GCNNNNNNNGC 4 cut(s) 232, 314, 917, 926
BstNI CCWGG 1 cut(s) 242
BstSCI CCNGG 1 cut(s) 240
BstUI CGCG 1 cut(s) 371
BstV1I GCAGC 2 cut(s) 329, 445
BstZI CGGCCG 1 cut(s) 315
BsuRI GGCC 7 cut(s) 20, 87, 317, 350, 462, 485, 836
BtgI CCRYGG 2 cut(s) 60, 486
BtsCI GGATG 1 cut(s) 740
BtsI GCAGTG 1 cut(s) 803
BtsIMutI CAGTG 1 cut(s) 803
Cac8I GCNNGC 1 cut(s) 204
CciI TCATGA 1 cut(s) 300
CfoI GCGC 2 cut(s) 373, 433
CsiI ACCWGGT 1 cut(s) 240
Csp6I GTAC 1 cut(s) 900
CviAII CATG 2 cut(s) 301, 487
CviQI GTAC 1 cut(s) 900
DdeI CTNAG 1 cut(s) 227
DraIII CACNNNGTG 1 cut(s) 244
EaeI YGGCCR 4 cut(s) 85, 315, 348, 483
EagI CGGCCG 1 cut(s) 315
Eam1104I CTCTTC 1 cut(s) 165
EarI CTCTTC 1 cut(s) 165
Ecl136II GAGCTC 1 cut(s) 911
EclXI CGGCCG 1 cut(s) 315
Eco130I CCWWGG 6 cut(s) 486, 525, 651, 811, 857, 903
Eco24I GRGCYC 2 cut(s) 406, 913
Eco52I CGGCCG 1 cut(s) 315
Eco53kI GAGCTC 1 cut(s) 911
Eco57I CTGAAG 2 cut(s) 275, 428
Eco88I CYCGRG 2 cut(s) 91, 659
EcoICRI GAGCTC 1 cut(s) 911
EcoRII CCWGG 1 cut(s) 240
EcoT14I CCWWGG 6 cut(s) 486, 525, 651, 811, 857, 903
EcoT38I GRGCYC 2 cut(s) 406, 913
ErhI CCWWGG 6 cut(s) 486, 525, 651, 811, 857, 903
FaeI CATG 2 cut(s) 304, 490
FaiI YATR 6 cut(s) 167, 302, 488, 592, 677, 866
FalI AAGNNNNNCTT 6 cut(s) 162, 194, 273, 305, 635, 667
FatI CATG 2 cut(s) 300, 486
Fnu4HI GCNGC 2 cut(s) 343, 434
FokI GGATG 1 cut(s) 727
FriOI GRGCYC 2 cut(s) 406, 913
Fsp4HI GCNGC 2 cut(s) 343, 434
FspBI CTAG 5 cut(s) 42, 260, 551, 858, 894
GlaI GCGC 2 cut(s) 372, 432
GluI GCNGC 2 cut(s) 343, 434
HaeIII GGCC 7 cut(s) 20, 87, 317, 350, 462, 485, 836
HhaI GCGC 2 cut(s) 373, 433
Hin1II CATG 2 cut(s) 304, 490
Hin6I GCGC 2 cut(s) 371, 431
HinP1I GCGC 2 cut(s) 371, 431
HincII GTYRAC 1 cut(s) 561
HindII GTYRAC 1 cut(s) 561
HindIII AAGCTT 1 cut(s) 918
HinfI GANTC 2 cut(s) 56, 698
HphI GGTGA 2 cut(s) 178, 554
Hpy166II GTNNAC 1 cut(s) 561
Hpy188I TCNGA 2 cut(s) 408, 853
Hpy188III TCNNGA 5 cut(s) 128, 301, 659, 704, 887
Hpy8I GTNNAC 1 cut(s) 561
Hpy99I CGWCG 1 cut(s) 226
HpyAV CCTTC 6 cut(s) 10, 257, 403, 701, 791, 893
HpyCH4IV ACGT 2 cut(s) 24, 425
HpyCH4V TGCA 2 cut(s) 13, 868
HpyF10VI GCNNNNNNNGC 4 cut(s) 232, 314, 917, 926
HpyF3I CTNAG 1 cut(s) 227
HpySE526I ACGT 2 cut(s) 24, 425
Hsp92II CATG 2 cut(s) 304, 490
HspAI GCGC 2 cut(s) 371, 431
LmnI GCTCC 3 cut(s) 503, 783, 908
LpnPI CCDG 8 cut(s) 120, 220, 227, 254, 278, 348, 444, 570
Lsp1109I GCAGC 2 cut(s) 329, 445
LweI GCATC 2 cut(s) 310, 749
MabI ACCWGGT 1 cut(s) 240
MaeI CTAG 5 cut(s) 42, 260, 551, 858, 894
MaeII ACGT 2 cut(s) 24, 425
MaeIII GTNAC 5 cut(s) 98, 154, 360, 495, 878
MboII GAAGA 2 cut(s) 182, 655
MfeI CAATTG 2 cut(s) 374, 734
MhlI GDGCHC 3 cut(s) 186, 406, 913
MlsI TGGCCA 2 cut(s) 87, 485
MluCI AATT 7 cut(s) 7, 120, 374, 446, 734, 839, 847
MluNI TGGCCA 2 cut(s) 87, 485
MlyI GAGTC 1 cut(s) 707
MmeI TCCRAC 2 cut(s) 355, 705
MnlI CCTC 7 cut(s) 46, 226, 229, 297, 382, 531, 826
Mox20I TGGCCA 2 cut(s) 87, 485
MscI TGGCCA 2 cut(s) 87, 485
MseI TTAA 2 cut(s) 440, 915
Msp20I TGGCCA 2 cut(s) 87, 485
MspR9I CCNGG 1 cut(s) 242
MunI CAATTG 2 cut(s) 374, 734
Mva1269I GAATGC 1 cut(s) 344
MvaI CCWGG 1 cut(s) 242
MvnI CGCG 1 cut(s) 371
MwoI GCNNNNNNNGC 4 cut(s) 232, 314, 917, 926
NcoI CCATGG 1 cut(s) 486
NlaIII CATG 2 cut(s) 304, 490
NlaIV GGNNCC 2 cut(s) 505, 657
NmeAIII GCCGAG 1 cut(s) 326
NmuCI GTSAC 3 cut(s) 98, 154, 878
PagI TCATGA 1 cut(s) 300
PctI GAATGC 1 cut(s) 344
PfeI GAWTC 1 cut(s) 56
PkrI GCNGC 2 cut(s) 344, 435
PleI GAGTC 1 cut(s) 706
PpsI GAGTC 1 cut(s) 706
Psp124BI GAGCTC 1 cut(s) 913
Psp1406I AACGTT 1 cut(s) 425
Psp6I CCWGG 1 cut(s) 240
PspGI CCWGG 1 cut(s) 240
PspN4I GGNNCC 2 cut(s) 505, 657
RsaI GTAC 1 cut(s) 901
RsaNI GTAC 1 cut(s) 900
SacI GAGCTC 1 cut(s) 913
SaqAI TTAA 2 cut(s) 440, 915
SatI GCNGC 2 cut(s) 343, 434
SchI GAGTC 1 cut(s) 707
ScrFI CCNGG 1 cut(s) 242
SduI GDGCHC 3 cut(s) 186, 406, 913
SexAI ACCWGGT 1 cut(s) 240
SfaNI GCATC 2 cut(s) 310, 749
SmlI CTYRAG 1 cut(s) 872
SmoI CTYRAG 1 cut(s) 872
SpeI ACTAGT 1 cut(s) 893
Sse9I AATT 7 cut(s) 7, 120, 374, 446, 734, 839, 847
SsiI CCGC 1 cut(s) 369
SspMI CTAG 5 cut(s) 42, 260, 551, 858, 894
SstI GAGCTC 1 cut(s) 913
StyD4I CCNGG 1 cut(s) 240
StyI CCWWGG 6 cut(s) 486, 525, 651, 811, 857, 903
TaiI ACGT 2 cut(s) 27, 428
TasI AATT 7 cut(s) 7, 120, 374, 446, 734, 839, 847
TfiI GAWTC 1 cut(s) 56
Tru1I TTAA 2 cut(s) 440, 915
Tru9I TTAA 2 cut(s) 440, 915
TscAI CASTG 1 cut(s) 803
TseFI GTSAC 3 cut(s) 98, 154, 878
TseI GCWGC 2 cut(s) 342, 433
Tsp45I GTSAC 3 cut(s) 98, 154, 878
TspDTI ATGAA 6 cut(s) 20, 176, 270, 289, 579, 656
TspGWI ACGGA 1 cut(s) 49
TspRI CASTG 1 cut(s) 803
XapI RAATTY 3 cut(s) 7, 446, 847
XmaJI CCTAGG 1 cut(s) 857
XspI CTAG 5 cut(s) 42, 260, 551, 858, 894
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.