Rh6BG259700

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0000063
Physical Location & Seq
Forward (+)
47335834 .. 47337474
1641 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG259700.1

Sequence Viewer

Length: 1053 bp
ATGTCCAAAGACGAGTTTGCCATATGTTACAGCCGAGATCACCCTTCTTGCCTTGAGATCAACATATCAAAACCATGGGATAAAAAATTTGAATTGGATGTGATTCTGACTTGGGGGAGTTTTCTGATCTCTCGAGACCTGAACTATGGCCTCAAAGGCACCGTGGGTCGGTATGGTGTGGAGAGCCACCCCACACTTCCATGCTTGGTGGTCGACTTTTATCATAAAAATCTTGGAAAGGACCTGGCTGGGACCCAACGTGCTGCATTACAAGGACTTCCGAACTTGCTAGGCCCCAAGGAAGGTAATGGTAAGAAGAAAACATCGGATGACAAGTCAAAATCAACAAAAGGATCCTCCAAACAAGGACAAACATCGAAGAAACGTGGCTCAACATTGGGGTATACTCGGAACGCCAAGAAAACAAAGAAATCATCGGATGTGGTGGAGAATTCGGTCACAAACCCGGTTAGTGAGGACATACTTTTTGAGGCTAATATGGATGATGGCCACGATGCTTTGGCTGAAAACCAAAATACGACTGAAATTGAGGATATGGCCGAAACTGGTGATGCCTCGATCCATAACACGGACTCGTCTGATAGCGAAGGTTTTTCGGAAGAAGCTCGATCAGAAAGCGGTGATCAAGAGAGAGATGGCCGCATTGATCATTCTTTGCCCCCACTTGAAAACTCCATGATTGAGATTGACATGGACGACTTGGGTGAGAGCTACCTTCACAACACATCGAGCATCGGCCAACAGCTTGCCATATCAAACAACTTTTCCAAGGATGTTGAAAACACAGATGCACGTGGTCGAGAAACACTACCTATCCATCAGACATTGGTTCAGGTGGGAGAATCTCGAAGCAGTACAACCCTAGAATTGGCTCTTCTCAACCAAACTGAATCACATCCCCCTATGTTCGGAACACTTACCTCTCCTCCTAATGACAGGATGTGTCAAAGTGAGCAAGTTATCGTTTGCGCTCCATCTTCGGCCGAGCTTGTGGTGAGTGCCCTGGTAACTTCAAGTCTGGTTTGCCTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

350

Amino Acids

38.17

Weight (kDa)

4.89

Isoelectric Point (pI)

43.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000063)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21382 FvH4_1g29794 FvH4_1g29795 FvH4_2g35573 FvH4_2g35574 FvH4_4g18552 FvH4_5g16044
malus_domestica MD05G1017000.v1.1
prunus_persica Prupe.3G140800_v2.0.a1 Prupe.6G164100_v2.0.a1
pyrus_communis pycom01g04330 pycom03g19820 pycom04g06720 pycom06g11360 pycom06g19000 pycom10g08100 pycom13g16660 pycom13g27590 pycom13g27640 pycom13g27890 pycom16g11770 pycom16g19530
rosa_chinensis RchiOBHm_Chr1g0317341 RchiOBHm_Chr1g0317351 RchiOBHm_Chr1g0320431 RchiOBHm_Chr1g0320711 RchiOBHm_Chr1g0320721 RchiOBHm_Chr1g0321611 RchiOBHm_Chr1g0321621 RchiOBHm_Chr1g0321631 RchiOBHm_Chr1g0323651 RchiOBHm_Chr1g0332991 RchiOBHm_Chr1g0333001 RchiOBHm_Chr1g0335981 RchiOBHm_Chr1g0335991 RchiOBHm_Chr1g0336001 RchiOBHm_Chr1g0350201 RchiOBHm_Chr1g0368201 RchiOBHm_Chr2g0105531 RchiOBHm_Chr2g0105541 RchiOBHm_Chr2g0116571 RchiOBHm_Chr2g0116581 RchiOBHm_Chr2g0121071 RchiOBHm_Chr2g0131351 RchiOBHm_Chr2g0131661 RchiOBHm_Chr2g0133021 RchiOBHm_Chr2g0138181 RchiOBHm_Chr2g0138191 RchiOBHm_Chr2g0142701 RchiOBHm_Chr2g0142711 RchiOBHm_Chr2g0152981 RchiOBHm_Chr3g0456181 RchiOBHm_Chr3g0456191 RchiOBHm_Chr3g0493631 RchiOBHm_Chr3g0496201 RchiOBHm_Chr4g0401541 RchiOBHm_Chr4g0410311 RchiOBHm_Chr4g0410321 RchiOBHm_Chr4g0419231 RchiOBHm_Chr4g0419511 RchiOBHm_Chr4g0419521 RchiOBHm_Chr5g0004311 RchiOBHm_Chr5g0004321 RchiOBHm_Chr5g0038131 RchiOBHm_Chr5g0038251 RchiOBHm_Chr5g0038261 RchiOBHm_Chr5g0038271 RchiOBHm_Chr5g0052241 RchiOBHm_Chr5g0053911 RchiOBHm_Chr5g0074641 RchiOBHm_Chr5g0076651 RchiOBHm_Chr5g0076661 RchiOBHm_Chr6g0249161 RchiOBHm_Chr6g0249171 RchiOBHm_Chr6g0250961 RchiOBHm_Chr6g0253701 RchiOBHm_Chr6g0262131 RchiOBHm_Chr6g0263181 RchiOBHm_Chr6g0263231 RchiOBHm_Chr6g0263241 RchiOBHm_Chr6g0263251 RchiOBHm_Chr6g0291271 RchiOBHm_Chr7g0194611 RchiOBHm_Chr7g0219691 RchiOBHm_Chr7g0219701 RchiOBHm_Chr7g0225431 RchiOBHm_Chr7g0234221 RchiOBHm_Chr7g0238711 RchiOBHm_Chr7g0238721 RchiOBHm_Chr7g0238731 RchiOBHm_Chr7g0239611 RchiOBHm_Chr7g0239621
rosa_laevigata RLG00000001361 RLG00000001376 RLG00000001860 RLG00000002051 RLG00000002362 RLG00000008940 RLG00000012764 RLG00000018782 RLG00000029639 RLG00000030151
rosa_multiflora Rmu_co8090794.1_g000001 Rmu_co8135356.1_g000001 Rmu_co8224968.1_g000001 Rmu_sc0000016.1_g000020 Rmu_sc0000029.1_g000061 Rmu_sc0000035.1_g000032 Rmu_sc0000060.1_g000041 Rmu_sc0000148.1_g000041 Rmu_sc0000315.1_g000084 Rmu_sc0000527.1_g000005 Rmu_sc0000527.1_g000007 Rmu_sc0000527.1_g000008 Rmu_sc0000648.1_g000002 Rmu_sc0000762.1_g000076 Rmu_sc0000870.1_g000003 Rmu_sc0000870.1_g000004 Rmu_sc0000948.1_g000037 Rmu_sc0000997.1_g000003 Rmu_sc0001047.1_g000041 Rmu_sc0001047.1_g000042 Rmu_sc0001075.1_g000044 Rmu_sc0001174.1_g000006 Rmu_sc0001235.1_g000025 Rmu_sc0001292.1_g000008 Rmu_sc0001301.1_g000038 Rmu_sc0001461.1_g000069 Rmu_sc0001461.1_g000070 Rmu_sc0001669.1_g000041 Rmu_sc0001689.1_g000027 Rmu_sc0001896.1_g000008 Rmu_sc0001909.1_g000013 Rmu_sc0002170.1_g000038 Rmu_sc0002200.1_g000014 Rmu_sc0002283.1_g000027 Rmu_sc0002284.1_g000014 Rmu_sc0002294.1_g000017 Rmu_sc0002294.1_g000018 Rmu_sc0002307.1_g000020 Rmu_sc0002307.1_g000021 Rmu_sc0002307.1_g000023 Rmu_sc0002357.1_g000054 Rmu_sc0002409.1_g000005 Rmu_sc0002535.1_g000002 Rmu_sc0002589.1_g000014 Rmu_sc0002759.1_g000016 Rmu_sc0002759.1_g000017 Rmu_sc0002777.1_g000015 Rmu_sc0002824.1_g000016 Rmu_sc0002872.1_g000005 Rmu_sc0002872.1_g000012 Rmu_sc0002872.1_g000013 Rmu_sc0002942.1_g000019 Rmu_sc0003337.1_g000001 Rmu_sc0003410.1_g000052 Rmu_sc0003445.1_g000010 Rmu_sc0003773.1_g000007 Rmu_sc0003773.1_g000008 Rmu_sc0003895.1_g000002 Rmu_sc0004063.1_g000006 Rmu_sc0004088.1_g000009 Rmu_sc0004088.1_g000010 Rmu_sc0004174.1_g000027 Rmu_sc0004196.1_g000010 Rmu_sc0004515.1_g000006 Rmu_sc0004727.1_g000010 Rmu_sc0004755.1_g000018 Rmu_sc0005016.1_g000030 Rmu_sc0005026.1_g000001 Rmu_sc0005044.1_g000007 Rmu_sc0005284.1_g000001 Rmu_sc0005431.1_g000030 Rmu_sc0005802.1_g000014 Rmu_sc0005802.1_g000015 Rmu_sc0005994.1_g000004 Rmu_sc0005994.1_g000005 Rmu_sc0006059.1_g000048 Rmu_sc0006583.1_g000013 Rmu_sc0006824.1_g000009 Rmu_sc0007458.1_g000005 Rmu_sc0007707.1_g000002 Rmu_sc0008242.1_g000012 Rmu_sc0008713.1_g000006 Rmu_sc0008770.1_g000008 Rmu_sc0009785.1_g000004 Rmu_sc0009785.1_g000005 Rmu_sc0010125.1_g000001 Rmu_sc0010211.1_g000004 Rmu_sc0011034.1_g000001 Rmu_sc0011833.1_g000006 Rmu_sc0014851.1_g000001 Rmu_sc0014899.1_g000001 Rmu_sc0015060.1_g000003 Rmu_sc0015186.1_g000001 Rmu_sc0015248.1_g000003 Rmu_sc0015248.1_g000004 Rmu_sc0015314.1_g000001 Rmu_sc0018098.1_g000002 Rmu_sc0022706.1_g000004 Rmu_sc0023350.1_g000002 Rmu_sc0027636.1_g000001 Rmu_sc0027672.1_g000003 Rmu_sc0030879.1_g000001 Rmu_ssc0000008.1_g000029 Rmu_ssc0000019.1_g000014 Rmu_ssc0000050.1_g000082 Rmu_ssc0000282.1_g000004 Rmu_ssc0000311.1_g000010
rosa_roxburghii Rroxscaffold_1G00015190 Rroxscaffold_1G00031880 Rroxscaffold_1G00031890 Rroxscaffold_1G00059310 Rroxscaffold_1G00060420 Rroxscaffold_1G00067930 Rroxscaffold_1G00075030 Rroxscaffold_2G00082210 Rroxscaffold_2G00122970 Rroxscaffold_3G00218230 Rroxscaffold_3G00219020 Rroxscaffold_3G00219030 Rroxscaffold_3G00223680 Rroxscaffold_3G00223690 Rroxscaffold_3G00223700 Rroxscaffold_3G00226870 Rroxscaffold_3G00226880 Rroxscaffold_3G00232990 Rroxscaffold_3G00265610 Rroxscaffold_3G00265620 Rroxscaffold_3G00265630 Rroxscaffold_4G00318660 Rroxscaffold_4G00319060 Rroxscaffold_4G00323500 Rroxscaffold_5G00357520 Rroxscaffold_5G00366150 Rroxscaffold_5G00377470 Rroxscaffold_6G00395700 Rroxscaffold_6G00413950 Rroxscaffold_7G00187650 Rroxscaffold_7G00198290 Rroxscaffold_7G00198300 Rroxscaffold_7G00208060
rosa_rugosa Rorug01G0173900 Rorug01G0174000 Rorug01G0174100 Rorug01G0174100 Rorug02G0341200 Rorug04G0135700 Rorug04G0135800 Rorug05G0032500 Rorug06G0021800
rosa_samantha Rh1AG036600 Rh1AG245800 Rh1CG021700 Rh1CG021800 Rh1CG085800 Rh1CG085900 Rh1CG187900 Rh1CG229600 Rh1CG239600 Rh1CG246500 Rh1CG246600 Rh2BG478100 Rh2DG341300 Rh2DG366600 Rh2DG375700 Rh2DG384300 Rh2DG487000 Rh2DG504000 Rh2DG504100 Rh3AG311800 Rh3AG327500 Rh3AG328300 Rh3BG345100 Rh3CG320100 Rh4AG005700 Rh4AG067900 Rh4AG068000 Rh4AG084400 Rh4AG106700 Rh4AG160000 Rh4AG173900 Rh4AG174000 Rh4CG125300 Rh4CG125500 Rh4CG264500 Rh4DG110800 Rh5AG047300 Rh5AG085200 Rh5AG126300 Rh5AG127300 Rh5AG203000 Rh5AG332400 Rh5AG332500 Rh5AG342400 Rh5AG344100 Rh5AG375600 Rh5AG378300 Rh5AG386000 Rh5AG529600 Rh5BG125200 Rh5CG137600 Rh5CG137700 Rh5DG125200 Rh6BG134100 Rh6BG175400 Rh6BG179500 Rh6BG179600 Rh6BG181600 Rh6BG181700 Rh6BG191100 Rh6BG232900 Rh6BG259700 Rh6BG259800 Rh7AG028000 Rh7AG319400 Rh7AG352700 Rh7AG352800 Rh7AG352900 Rh7AG482500 Rh7AG482600 Rh7AG503800 Rh7BG334700 Rh7CG200100 Rh7CG336200 Rh7CG370200 Rh7CG370400 Rh7CG370500
rosa_wichuraiana Rw1G001580 Rw1G003570 Rw1G004260 Rw1G004270 Rw1G021170 Rw2G019390 Rw2G040280 Rw2G044050 Rw4G004430 Rw5G010950 Rw5G018350 Rw5G032890 Rw6G002840 Rw6G006510 Rw6G007780 Rw6G033790 Rw7G036320 Rw7G040550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 158
AccI GTMKAC 2 cut(s) 213, 404
AciI CCGC 2 cut(s) 639, 661
AclWI GGATC 3 cut(s) 348, 361, 574
AcoI YGGCCR 5 cut(s) 508, 558, 658, 757, 1002
AcsI RAATTY 2 cut(s) 86, 451
AcvI CACGTG 1 cut(s) 815
AfaI GTAC 1 cut(s) 877
AfiI CCNNNNNNNGG 5 cut(s) 168, 302, 589, 889, 929
AgsI TTSAA 4 cut(s) 92, 689, 800, 1035
AjnI CCWGG 2 cut(s) 243, 1023
AluBI AGCT 4 cut(s) 626, 732, 766, 1009
AluI AGCT 4 cut(s) 626, 732, 766, 1009
Alw26I GTCTC 1 cut(s) 129
AlwI GGATC 3 cut(s) 348, 361, 574
Ama87I CYCGRG 1 cut(s) 132
AoxI GGCC 7 cut(s) 148, 292, 508, 558, 658, 757, 1002
ApeKI GCWGC 1 cut(s) 263
ApoI RAATTY 2 cut(s) 86, 451
ArsI GACNNNNNNTTYG 2 cut(s) 470, 502
AspLEI GCGC 1 cut(s) 992
AspS9I GGNCC 3 cut(s) 241, 252, 293
AsuC2I CCSGG 1 cut(s) 467
AsuHPI GGTGA 5 cut(s) 32, 581, 653, 737, 1027
AvaI CYCGRG 1 cut(s) 132
AvaII GGWCC 2 cut(s) 241, 252
BaeGI GKGCMC 1 cut(s) 1024
BalI TGGCCA 1 cut(s) 510
BamHI GGATCC 1 cut(s) 353
BanI GGYRCC 1 cut(s) 158
BbrPI CACGTG 1 cut(s) 815
BbvI GCAGC 1 cut(s) 250
BccI CCATC 4 cut(s) 500, 650, 846, 1003
BciT130I CCWGG 2 cut(s) 245, 1025
BclI TGATCA 2 cut(s) 643, 667
BcnI CCSGG 1 cut(s) 467
BcoDI GTCTC 1 cut(s) 129
BfaI CTAG 2 cut(s) 290, 884
BglI GCCNNNNNGGC 1 cut(s) 156
BisI GCNGC 2 cut(s) 264, 661
BlsI GCNGC 2 cut(s) 265, 662
Bme1390I CCNGG 3 cut(s) 245, 467, 1025
Bme18I GGWCC 2 cut(s) 241, 252
BmeT110I CYCGRG 1 cut(s) 132
BmgT120I GGNCC 3 cut(s) 241, 252, 293
BmiI GGNNCC 5 cut(s) 160, 253, 254, 295, 355
BmrFI CCNGG 3 cut(s) 245, 467, 1025
BmsI GCATC 4 cut(s) 505, 562, 762, 799
BpuEI CTTGAG 1 cut(s) 74
BpuMI CCSGG 1 cut(s) 467
BsaAI YACGTR 1 cut(s) 815
BsaI GGTCTC 1 cut(s) 129
BsaJI CCNNGG 5 cut(s) 74, 162, 297, 789, 1023
BsaXI ACNNNNNCTCC 2 cut(s) 931, 961
Bsc4I CCNNNNNNNGG 5 cut(s) 168, 302, 589, 889, 929
Bse1I ACTGG 1 cut(s) 571
BseBI CCWGG 2 cut(s) 245, 1025
BseDI CCNNGG 5 cut(s) 74, 162, 297, 789, 1023
BseGI GGATG 7 cut(s) 103, 334, 445, 508, 799, 916, 966
BseLI CCNNNNNNNGG 5 cut(s) 168, 302, 589, 889, 929
BseNI ACTGG 1 cut(s) 571
BseRI GAGGAG 1 cut(s) 936
BseSI GKGCMC 1 cut(s) 1024
BseX3I CGGCCG 1 cut(s) 1002
BseXI GCAGC 1 cut(s) 250
BseYI CCCAGC 1 cut(s) 248
Bsh1285I CGRYCG 1 cut(s) 1005
BshFI GGCC 7 cut(s) 150, 294, 510, 560, 660, 759, 1004
BshNI GGYRCC 1 cut(s) 158
BsiEI CGRYCG 1 cut(s) 1005
BsiHKCI CYCGRG 1 cut(s) 132
BsiSI CCGG 1 cut(s) 467
BslFI GGGAC 1 cut(s) 265
BslI CCNNNNNNNGG 5 cut(s) 168, 302, 589, 889, 929
BsmAI GTCTC 1 cut(s) 129
BsmFI GGGAC 1 cut(s) 265
BsnI GGCC 7 cut(s) 150, 294, 510, 560, 660, 759, 1004
Bso31I GGTCTC 1 cut(s) 129
BsoBI CYCGRG 1 cut(s) 132
Bsp1286I GDGCHC 1 cut(s) 1024
Bsp143I GATC 8 cut(s) 37, 57, 126, 353, 579, 629, 643, 667
Bsp19I CCATGG 1 cut(s) 74
BspACI CCGC 2 cut(s) 639, 661
BspANI GGCC 7 cut(s) 150, 294, 510, 560, 660, 759, 1004
BspLI GGNNCC 5 cut(s) 160, 253, 254, 295, 355
BspPI GGATC 3 cut(s) 348, 361, 574
BspQI GCTCTTC 1 cut(s) 900
BspT107I GGYRCC 1 cut(s) 158
BspTNI GGTCTC 1 cut(s) 129
BsrI ACTGG 1 cut(s) 571
BssECI CCNNGG 5 cut(s) 74, 162, 297, 789, 1023
BssMI GATC 8 cut(s) 37, 57, 126, 353, 579, 629, 643, 667
BssNAI GTATAC 1 cut(s) 405
BssT1I CCWWGG 3 cut(s) 74, 297, 789
Bst1107I GTATAC 1 cut(s) 405
Bst2UI CCWGG 2 cut(s) 245, 1025
Bst4CI ACNGT 1 cut(s) 163
Bst6I CTCTTC 1 cut(s) 900
BstBAI YACGTR 1 cut(s) 815
BstC8I GCNNGC 1 cut(s) 768
BstDSI CCRYGG 2 cut(s) 74, 162
BstF5I GGATG 7 cut(s) 103, 334, 445, 508, 799, 916, 966
BstHHI GCGC 1 cut(s) 992
BstKTI GATC 8 cut(s) 40, 60, 129, 356, 582, 632, 646, 670
BstMAI GTCTC 1 cut(s) 129
BstMBI GATC 8 cut(s) 37, 57, 126, 353, 579, 629, 643, 667
BstMCI CGRYCG 1 cut(s) 1005
BstMWI GCNNNNNNNGC 1 cut(s) 156
BstNI CCWGG 2 cut(s) 245, 1025
BstSCI CCNGG 3 cut(s) 243, 465, 1023
BstSLI GKGCMC 1 cut(s) 1024
BstV1I GCAGC 1 cut(s) 250
BstX2I RGATCY 1 cut(s) 353
BstYI RGATCY 1 cut(s) 353
BstZ17I GTATAC 1 cut(s) 405
BstZI CGGCCG 1 cut(s) 1002
BsuRI GGCC 7 cut(s) 150, 294, 510, 560, 660, 759, 1004
BtgI CCRYGG 2 cut(s) 74, 162
BtsCI GGATG 7 cut(s) 103, 334, 445, 508, 799, 916, 966
Cac8I GCNNGC 1 cut(s) 768
CfoI GCGC 1 cut(s) 992
Cfr13I GGNCC 3 cut(s) 241, 252, 293
Csp6I GTAC 1 cut(s) 876
CviAII CATG 4 cut(s) 75, 201, 697, 712
CviQI GTAC 1 cut(s) 876
DpnI GATC 8 cut(s) 39, 59, 128, 355, 581, 631, 645, 669
DpnII GATC 8 cut(s) 37, 57, 126, 353, 579, 629, 643, 667
EaeI YGGCCR 5 cut(s) 508, 558, 658, 757, 1002
EagI CGGCCG 1 cut(s) 1002
Eam1104I CTCTTC 1 cut(s) 900
EarI CTCTTC 1 cut(s) 900
EclXI CGGCCG 1 cut(s) 1002
Eco130I CCWWGG 3 cut(s) 74, 297, 789
Eco31I GGTCTC 1 cut(s) 129
Eco47I GGWCC 2 cut(s) 241, 252
Eco52I CGGCCG 1 cut(s) 1002
Eco72I CACGTG 1 cut(s) 815
Eco88I CYCGRG 1 cut(s) 132
EcoO109I RGGNCCY 3 cut(s) 241, 252, 293
EcoRI GAATTC 1 cut(s) 451
EcoRII CCWGG 2 cut(s) 243, 1023
EcoT14I CCWWGG 3 cut(s) 74, 297, 789
ErhI CCWWGG 3 cut(s) 74, 297, 789
FaeI CATG 4 cut(s) 78, 204, 700, 715
FaqI GGGAC 1 cut(s) 265
FatI CATG 4 cut(s) 74, 200, 696, 711
FauNDI CATATG 1 cut(s) 23
FbaI TGATCA 2 cut(s) 643, 667
FblI GTMKAC 2 cut(s) 213, 404
Fnu4HI GCNGC 2 cut(s) 264, 661
FokI GGATG 7 cut(s) 110, 341, 452, 515, 806, 903, 973
Fsp4HI GCNGC 2 cut(s) 264, 661
FspBI CTAG 2 cut(s) 290, 884
GlaI GCGC 1 cut(s) 991
GluI GCNGC 2 cut(s) 264, 661
GsaI CCCAGC 1 cut(s) 252
HaeIII GGCC 7 cut(s) 150, 294, 510, 560, 660, 759, 1004
HapII CCGG 1 cut(s) 467
HhaI GCGC 1 cut(s) 992
Hin1II CATG 4 cut(s) 78, 204, 700, 715
Hin6I GCGC 1 cut(s) 990
HinP1I GCGC 1 cut(s) 990
HincII GTYRAC 1 cut(s) 214
HindII GTYRAC 1 cut(s) 214
HinfI GANTC 4 cut(s) 103, 593, 863, 911
HpaII CCGG 1 cut(s) 467
HphI GGTGA 5 cut(s) 32, 581, 653, 737, 1027
Hpy166II GTNNAC 2 cut(s) 214, 405
Hpy188III TCNNGA 5 cut(s) 132, 134, 647, 821, 867
Hpy8I GTNNAC 2 cut(s) 214, 405
HpyAV CCTTC 4 cut(s) 54, 296, 602, 746
HpyCH4III ACNGT 1 cut(s) 163
HpyCH4IV ACGT 3 cut(s) 259, 385, 814
HpyCH4V TGCA 2 cut(s) 266, 812
HpyF10VI GCNNNNNNNGC 1 cut(s) 156
HpySE526I ACGT 3 cut(s) 259, 385, 814
Hsp92II CATG 4 cut(s) 78, 204, 700, 715
HspAI GCGC 1 cut(s) 990
KflI GGGWCCC 1 cut(s) 252
Ksp22I TGATCA 2 cut(s) 643, 667
Kzo9I GATC 8 cut(s) 37, 57, 126, 353, 579, 629, 643, 667
LguI GCTCTTC 1 cut(s) 900
LmnI GCTCC 1 cut(s) 997
Lsp1109I GCAGC 1 cut(s) 250
LweI GCATC 4 cut(s) 505, 562, 762, 799
MaeI CTAG 2 cut(s) 290, 884
MaeII ACGT 3 cut(s) 259, 385, 814
MaeIII GTNAC 3 cut(s) 26, 457, 1027
MalI GATC 8 cut(s) 39, 59, 128, 355, 581, 631, 645, 669
MboI GATC 8 cut(s) 37, 57, 126, 353, 579, 629, 643, 667
MboII GAAGA 5 cut(s) 328, 391, 632, 887, 990
MflI RGATCY 1 cut(s) 353
MhlI GDGCHC 1 cut(s) 1024
MlsI TGGCCA 1 cut(s) 510
MluCI AATT 5 cut(s) 86, 92, 451, 546, 887
MluNI TGGCCA 1 cut(s) 510
MlyI GAGTC 1 cut(s) 587
MnlI CCTC 8 cut(s) 161, 367, 469, 484, 544, 586, 952, 957
Mox20I TGGCCA 1 cut(s) 510
MscI TGGCCA 1 cut(s) 510
MseI TTAA 1 cut(s) 1051
MslI CAYNNNNRTG 1 cut(s) 199
Msp20I TGGCCA 1 cut(s) 510
MspI CCGG 1 cut(s) 467
MspR9I CCNGG 3 cut(s) 245, 467, 1025
MvaI CCWGG 2 cut(s) 245, 1025
MwoI GCNNNNNNNGC 1 cut(s) 156
NciI CCSGG 1 cut(s) 467
NcoI CCATGG 1 cut(s) 74
NdeI CATATG 1 cut(s) 23
NdeII GATC 8 cut(s) 37, 57, 126, 353, 579, 629, 643, 667
NlaIII CATG 4 cut(s) 78, 204, 700, 715
NlaIV GGNNCC 5 cut(s) 160, 253, 254, 295, 355
NmeAIII GCCGAG 2 cut(s) 59, 1030
NmuCI GTSAC 1 cut(s) 457
PaeR7I CTCGAG 1 cut(s) 132
PciSI GCTCTTC 1 cut(s) 900
PfeI GAWTC 3 cut(s) 103, 863, 911
PkrI GCNGC 2 cut(s) 265, 662
PleI GAGTC 1 cut(s) 587
PmaCI CACGTG 1 cut(s) 815
PmlI CACGTG 1 cut(s) 815
PpsI GAGTC 1 cut(s) 587
Ppu21I YACGTR 1 cut(s) 815
PpuMI RGGWCCY 2 cut(s) 241, 252
Psp5II RGGWCCY 2 cut(s) 241, 252
Psp6I CCWGG 2 cut(s) 243, 1023
PspCI CACGTG 1 cut(s) 815
PspFI CCCAGC 1 cut(s) 248
PspGI CCWGG 2 cut(s) 243, 1023
PspN4I GGNNCC 5 cut(s) 160, 253, 254, 295, 355
PspPI GGNCC 3 cut(s) 241, 252, 293
PspPPI RGGWCCY 2 cut(s) 241, 252
PsuI RGATCY 1 cut(s) 353
RsaI GTAC 1 cut(s) 877
RsaNI GTAC 1 cut(s) 876
RseI CAYNNNNRTG 1 cut(s) 199
SalI GTCGAC 1 cut(s) 212
SapI GCTCTTC 1 cut(s) 900
SaqAI TTAA 1 cut(s) 1051
SatI GCNGC 2 cut(s) 264, 661
Sau3AI GATC 8 cut(s) 37, 57, 126, 353, 579, 629, 643, 667
Sau96I GGNCC 3 cut(s) 241, 252, 293
SchI GAGTC 1 cut(s) 587
ScrFI CCNGG 3 cut(s) 245, 467, 1025
SduI GDGCHC 1 cut(s) 1024
SfaNI GCATC 4 cut(s) 505, 562, 762, 799
Sfr274I CTCGAG 1 cut(s) 132
SinI GGWCC 2 cut(s) 241, 252
SlaI CTCGAG 1 cut(s) 132
SmiMI CAYNNNNRTG 1 cut(s) 199
SmlI CTYRAG 2 cut(s) 53, 132
SmoI CTYRAG 2 cut(s) 53, 132
Sse9I AATT 5 cut(s) 86, 92, 451, 546, 887
SsiI CCGC 2 cut(s) 639, 661
SspMI CTAG 2 cut(s) 290, 884
StyD4I CCNGG 3 cut(s) 243, 465, 1023
StyI CCWWGG 3 cut(s) 74, 297, 789
TaaI ACNGT 1 cut(s) 163
TaiI ACGT 3 cut(s) 262, 388, 817
TaqI TCGA 8 cut(s) 133, 213, 377, 578, 628, 749, 820, 868
TaqII GACCGA 1 cut(s) 445
TasI AATT 5 cut(s) 86, 92, 451, 546, 887
TatI WGTACW 1 cut(s) 875
TauI GCSGC 1 cut(s) 663
TfiI GAWTC 3 cut(s) 103, 863, 911
Tru1I TTAA 1 cut(s) 1051
Tru9I TTAA 1 cut(s) 1051
TseFI GTSAC 1 cut(s) 457
TseI GCWGC 1 cut(s) 263
Tsp45I GTSAC 1 cut(s) 457
TspGWI ACGGA 1 cut(s) 605
VpaK11BI GGWCC 2 cut(s) 241, 252
XapI RAATTY 2 cut(s) 86, 451
XhoI CTCGAG 1 cut(s) 132
XmiI GTMKAC 2 cut(s) 213, 404
XspI CTAG 2 cut(s) 290, 884
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.