Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000282.1

Orthogroup ID

OG0000063

Physical Location & Seq

Genomic Coordinates Forward (+)

14455 .. 16754

Gene Structure 2300 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000282.1_g000004.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1923 bp

atggccgatgatatatcagaaactgaaacggggttagaggacagcgaaacaacaaaagcacaattggctgaattctcaaccaagtttgaagctgcttttagtgcttctgtggacaaactccaaagctctgtgatatgtcggttgacgaagaacaaggaaccgcaaagagagtgcatattaggaccacattacagcttgggtatgccgtcagccatcaacgaggttctagaaaactcattggtggacacatcttgcttgaccggcggagctaactggtctagttggaacacaaattccaagcagccagggagttggccgaaatcgacacccgagtggaagaaatgggtaccacggatggagcattttatcggccgctcatggaaaaaatttggtatttatgatagcatcaaaatgtctgagcaagaaatctacatggatcggcctcttcttgccgctgccttgtgtttttggtcatccgctactaacaacatgagcctgccacttgggccaatgagtccaaccttgctagatatggccgcaatatttggttttcggccgaatggagaggagatatgtgccttagctgatctcccttcctcttttcatgctagcctgaaacccaaagtgaacaaggacgacaacaaagccaaacaaaaagctgatgccaaagcgaggaagttgcttaactatagcactttctatgccgaacatgcaattgccgaggatgtgtccacggttgagaggcacgaaccaacgcaacatgagcacgccgctttcctcctctattggttatgcaaatacgtgttttgcacgaagtcgaacaagtgcttgttcgagtttgctggtattgcggaggcccttagcttgggtaaacctttagcccttggtccgtttgtccttgcctatctttaccgtactttgcataatgtggtgaccaacaatatgacactggatgttggagggccattatggatgttccaggtatgggtgcagacttactttcatcatcttcgaccaagtcatccttttgaatccactgtgattctcggccgccagatcatctctcttggtcctcatgcacattcggtagcagaatgctttgctttcttcctttcgaaaaaaaccatgaccaaggaagagtttgccatatgttatagtcgagactatccttcttgtcttgcattaaacataacgaaaccatgggagaggtctttggacttgtcagtacttctaccttgggggagcattctcatttctcgagacataaactatggtctcaagggtacactgggtcggccaggggttgaggtttatcttccgaactttgttgcgcgtcagcttggcttcatacaaagttgtccagccttctttctaatgtcccggaatcgtttttgttcatggagagatgggtttacagacaccgcacattgttcggccatcactctttattatcagactcagtttggcaactttgagagatccggcctgagcgcccgcgaacctgatcatagaacaactccgactttccaaacttggtcaacatttatcaagaagaaacttggagaggacttgcggacaacagagcgtattgccttgtatggattcccgggcttgttcaccaacaaaggtgagacttgggtgagaaccagcttcttaatatcgaccaaccactcgcaaactcacataaccttgctaaggattcggaagacatcggcgtacttggccgagaggcattgcttaaccaccaaacacttgtcccggtacgtggaactcaaagcagttcaaccttggaattggttctcctcaatccaactgaaccaaatccttctatgtccggaatgcttacctcccctcttactgaagggatgcctcgaaatgatcaagctatcgtttgtgccccatcgtcgactgagcctgtggtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001525 GO:0001568 GO:0001944 GO:0002155 GO:0002254 GO:0002353 GO:0002526 GO:0003008 GO:0003013 GO:0003073 GO:0003085 GO:0003674 GO:0003824 GO:0004177 GO:0005575 GO:0005623 GO:0006508 GO:0006807 GO:0006950 GO:0006952 GO:0006954 GO:0007275 GO:0008015 GO:0008150 GO:0008152 GO:0008217 GO:0008233 GO:0008238 GO:0008239 GO:0009611 GO:0009653 GO:0009966 GO:0010594 GO:0010632 GO:0010646 GO:0016787 GO:0019222 GO:0019538 GO:0023051 GO:0030334 GO:0031323 GO:0032501 GO:0032502 GO:0032879 GO:0033500 GO:0035239 GO:0035295 GO:0040012 GO:0042060 GO:0042592 GO:0042593 GO:0043170 GO:0043535 GO:0044238 GO:0044464 GO:0045178 GO:0045776 GO:0048514 GO:0048583 GO:0048646 GO:0048731 GO:0048856 GO:0048871 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051239 GO:0051270 GO:0060055 GO:0065007 GO:0065008 GO:0070011 GO:0071704 GO:0072358 GO:0072359 GO:0072376 GO:0097009 GO:0140096 GO:1901564 GO:2000145 GO:2000377

KEGG Pathways

Metabolic & Signaling

ko04614 ko04974 map04614 map04974

Pfam Domains

Protein Families

Peptidase_S28

Protein Analysis

640

Amino Acids

72.73

Weight (kDa)

8.72

Isoelectric Point (pI)

44.61

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000063)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g21382 FvH4_1g29794 FvH4_1g29795 FvH4_2g35573 FvH4_2g35574 FvH4_4g18552 FvH4_5g16044
malus_domestica	MD05G1017000.v1.1
prunus_persica	Prupe.3G140800_v2.0.a1 Prupe.6G164100_v2.0.a1
pyrus_communis	pycom01g04330 pycom03g19820 pycom04g06720 pycom06g11360 pycom06g19000 pycom10g08100 pycom13g16660 pycom13g27590 pycom13g27640 pycom13g27890 pycom16g11770 pycom16g19530
rosa_chinensis	RchiOBHm_Chr1g0317341 RchiOBHm_Chr1g0317351 RchiOBHm_Chr1g0320431 RchiOBHm_Chr1g0320711 RchiOBHm_Chr1g0320721 RchiOBHm_Chr1g0321611 RchiOBHm_Chr1g0321621 RchiOBHm_Chr1g0321631 RchiOBHm_Chr1g0323651 RchiOBHm_Chr1g0332991 RchiOBHm_Chr1g0333001 RchiOBHm_Chr1g0335981 RchiOBHm_Chr1g0335991 RchiOBHm_Chr1g0336001 RchiOBHm_Chr1g0350201 RchiOBHm_Chr1g0368201 RchiOBHm_Chr2g0105531 RchiOBHm_Chr2g0105541 RchiOBHm_Chr2g0116571 RchiOBHm_Chr2g0116581 RchiOBHm_Chr2g0121071 RchiOBHm_Chr2g0131351 RchiOBHm_Chr2g0131661 RchiOBHm_Chr2g0133021 RchiOBHm_Chr2g0138181 RchiOBHm_Chr2g0138191 RchiOBHm_Chr2g0142701 RchiOBHm_Chr2g0142711 RchiOBHm_Chr2g0152981 RchiOBHm_Chr3g0456181 RchiOBHm_Chr3g0456191 RchiOBHm_Chr3g0493631 RchiOBHm_Chr3g0496201 RchiOBHm_Chr4g0401541 RchiOBHm_Chr4g0410311 RchiOBHm_Chr4g0410321 RchiOBHm_Chr4g0419231 RchiOBHm_Chr4g0419511 RchiOBHm_Chr4g0419521 RchiOBHm_Chr5g0004311 RchiOBHm_Chr5g0004321 RchiOBHm_Chr5g0038131 RchiOBHm_Chr5g0038251 RchiOBHm_Chr5g0038261 RchiOBHm_Chr5g0038271 RchiOBHm_Chr5g0052241 RchiOBHm_Chr5g0053911 RchiOBHm_Chr5g0074641 RchiOBHm_Chr5g0076651 RchiOBHm_Chr5g0076661 RchiOBHm_Chr6g0249161 RchiOBHm_Chr6g0249171 RchiOBHm_Chr6g0250961 RchiOBHm_Chr6g0253701 RchiOBHm_Chr6g0262131 RchiOBHm_Chr6g0263181 RchiOBHm_Chr6g0263231 RchiOBHm_Chr6g0263241 RchiOBHm_Chr6g0263251 RchiOBHm_Chr6g0291271 RchiOBHm_Chr7g0194611 RchiOBHm_Chr7g0219691 RchiOBHm_Chr7g0219701 RchiOBHm_Chr7g0225431 RchiOBHm_Chr7g0234221 RchiOBHm_Chr7g0238711 RchiOBHm_Chr7g0238721 RchiOBHm_Chr7g0238731 RchiOBHm_Chr7g0239611 RchiOBHm_Chr7g0239621
rosa_laevigata	RLG00000001361 RLG00000001376 RLG00000001860 RLG00000002051 RLG00000002362 RLG00000008940 RLG00000012764 RLG00000018782 RLG00000029639 RLG00000030151
rosa_multiflora	Rmu_co8090794.1_g000001 Rmu_co8135356.1_g000001 Rmu_co8224968.1_g000001 Rmu_sc0000016.1_g000020 Rmu_sc0000029.1_g000061 Rmu_sc0000035.1_g000032 Rmu_sc0000060.1_g000041 Rmu_sc0000148.1_g000041 Rmu_sc0000315.1_g000084 Rmu_sc0000527.1_g000005 Rmu_sc0000527.1_g000007 Rmu_sc0000527.1_g000008 Rmu_sc0000648.1_g000002 Rmu_sc0000762.1_g000076 Rmu_sc0000870.1_g000003 Rmu_sc0000870.1_g000004 Rmu_sc0000948.1_g000037 Rmu_sc0000997.1_g000003 Rmu_sc0001047.1_g000041 Rmu_sc0001047.1_g000042 Rmu_sc0001075.1_g000044 Rmu_sc0001174.1_g000006 Rmu_sc0001235.1_g000025 Rmu_sc0001292.1_g000008 Rmu_sc0001301.1_g000038 Rmu_sc0001461.1_g000069 Rmu_sc0001461.1_g000070 Rmu_sc0001669.1_g000041 Rmu_sc0001689.1_g000027 Rmu_sc0001896.1_g000008 Rmu_sc0001909.1_g000013 Rmu_sc0002170.1_g000038 Rmu_sc0002200.1_g000014 Rmu_sc0002283.1_g000027 Rmu_sc0002284.1_g000014 Rmu_sc0002294.1_g000017 Rmu_sc0002294.1_g000018 Rmu_sc0002307.1_g000020 Rmu_sc0002307.1_g000021 Rmu_sc0002307.1_g000023 Rmu_sc0002357.1_g000054 Rmu_sc0002409.1_g000005 Rmu_sc0002535.1_g000002 Rmu_sc0002589.1_g000014 Rmu_sc0002759.1_g000016 Rmu_sc0002759.1_g000017 Rmu_sc0002777.1_g000015 Rmu_sc0002824.1_g000016 Rmu_sc0002872.1_g000005 Rmu_sc0002872.1_g000012 Rmu_sc0002872.1_g000013 Rmu_sc0002942.1_g000019 Rmu_sc0003337.1_g000001 Rmu_sc0003410.1_g000052 Rmu_sc0003445.1_g000010 Rmu_sc0003773.1_g000007 Rmu_sc0003773.1_g000008 Rmu_sc0003895.1_g000002 Rmu_sc0004063.1_g000006 Rmu_sc0004088.1_g000009 Rmu_sc0004088.1_g000010 Rmu_sc0004174.1_g000027 Rmu_sc0004196.1_g000010 Rmu_sc0004515.1_g000006 Rmu_sc0004727.1_g000010 Rmu_sc0004755.1_g000018 Rmu_sc0005016.1_g000030 Rmu_sc0005026.1_g000001 Rmu_sc0005044.1_g000007 Rmu_sc0005284.1_g000001 Rmu_sc0005431.1_g000030 Rmu_sc0005802.1_g000014 Rmu_sc0005802.1_g000015 Rmu_sc0005994.1_g000004 Rmu_sc0005994.1_g000005 Rmu_sc0006059.1_g000048 Rmu_sc0006583.1_g000013 Rmu_sc0006824.1_g000009 Rmu_sc0007458.1_g000005 Rmu_sc0007707.1_g000002 Rmu_sc0008242.1_g000012 Rmu_sc0008713.1_g000006 Rmu_sc0008770.1_g000008 Rmu_sc0009785.1_g000004 Rmu_sc0009785.1_g000005 Rmu_sc0010125.1_g000001 Rmu_sc0010211.1_g000004 Rmu_sc0011034.1_g000001 Rmu_sc0011833.1_g000006 Rmu_sc0014851.1_g000001 Rmu_sc0014899.1_g000001 Rmu_sc0015060.1_g000003 Rmu_sc0015186.1_g000001 Rmu_sc0015248.1_g000003 Rmu_sc0015248.1_g000004 Rmu_sc0015314.1_g000001 Rmu_sc0018098.1_g000002 Rmu_sc0022706.1_g000004 Rmu_sc0023350.1_g000002 Rmu_sc0027636.1_g000001 Rmu_sc0027672.1_g000003 Rmu_sc0030879.1_g000001 Rmu_ssc0000008.1_g000029 Rmu_ssc0000019.1_g000014 Rmu_ssc0000050.1_g000082 Rmu_ssc0000282.1_g000004 Rmu_ssc0000311.1_g000010
rosa_roxburghii	Rroxscaffold_1G00015190 Rroxscaffold_1G00031880 Rroxscaffold_1G00031890 Rroxscaffold_1G00059310 Rroxscaffold_1G00060420 Rroxscaffold_1G00067930 Rroxscaffold_1G00075030 Rroxscaffold_2G00082210 Rroxscaffold_2G00122970 Rroxscaffold_3G00218230 Rroxscaffold_3G00219020 Rroxscaffold_3G00219030 Rroxscaffold_3G00223680 Rroxscaffold_3G00223690 Rroxscaffold_3G00223700 Rroxscaffold_3G00226870 Rroxscaffold_3G00226880 Rroxscaffold_3G00232990 Rroxscaffold_3G00265610 Rroxscaffold_3G00265620 Rroxscaffold_3G00265630 Rroxscaffold_4G00318660 Rroxscaffold_4G00319060 Rroxscaffold_4G00323500 Rroxscaffold_5G00357520 Rroxscaffold_5G00366150 Rroxscaffold_5G00377470 Rroxscaffold_6G00395700 Rroxscaffold_6G00413950 Rroxscaffold_7G00187650 Rroxscaffold_7G00198290 Rroxscaffold_7G00198300 Rroxscaffold_7G00208060
rosa_rugosa	Rorug01G0173900 Rorug01G0174000 Rorug01G0174100 Rorug01G0174100 Rorug02G0341200 Rorug04G0135700 Rorug04G0135800 Rorug05G0032500 Rorug06G0021800
rosa_samantha	Rh1AG036600 Rh1AG245800 Rh1CG021700 Rh1CG021800 Rh1CG085800 Rh1CG085900 Rh1CG187900 Rh1CG229600 Rh1CG239600 Rh1CG246500 Rh1CG246600 Rh2BG478100 Rh2DG341300 Rh2DG366600 Rh2DG375700 Rh2DG384300 Rh2DG487000 Rh2DG504000 Rh2DG504100 Rh3AG311800 Rh3AG327500 Rh3AG328300 Rh3BG345100 Rh3CG320100 Rh4AG005700 Rh4AG067900 Rh4AG068000 Rh4AG084400 Rh4AG106700 Rh4AG160000 Rh4AG173900 Rh4AG174000 Rh4CG125300 Rh4CG125500 Rh4CG264500 Rh4DG110800 Rh5AG047300 Rh5AG085200 Rh5AG126300 Rh5AG127300 Rh5AG203000 Rh5AG332400 Rh5AG332500 Rh5AG342400 Rh5AG344100 Rh5AG375600 Rh5AG378300 Rh5AG386000 Rh5AG529600 Rh5BG125200 Rh5CG137600 Rh5CG137700 Rh5DG125200 Rh6BG134100 Rh6BG175400 Rh6BG179500 Rh6BG179600 Rh6BG181600 Rh6BG181700 Rh6BG191100 Rh6BG232900 Rh6BG259700 Rh6BG259800 Rh7AG028000 Rh7AG319400 Rh7AG352700 Rh7AG352800 Rh7AG352900 Rh7AG482500 Rh7AG482600 Rh7AG503800 Rh7BG334700 Rh7CG200100 Rh7CG336200 Rh7CG370200 Rh7CG370400 Rh7CG370500
rosa_wichuraiana	Rw1G001580 Rw1G003570 Rw1G004260 Rw1G004270 Rw1G021170 Rw2G019390 Rw2G040280 Rw2G044050 Rw4G004430 Rw5G010950 Rw5G018350 Rw5G032890 Rw6G002840 Rw6G006510 Rw6G007780 Rw6G033790 Rw7G036320 Rw7G040550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	346
AccB1I	GGYRCC	1 cut(s)	346
AccBSI	CCGCTC	1 cut(s)	375
AccI	GTMKAC	1 cut(s)	1906
AccII	CGCG	2 cut(s)	1333, 1497
AccIII	TCCGGA	1 cut(s)	1834
AclWI	GGATC	2 cut(s)	444, 1473
AcoI	YGGCCR	9 cut(s)	3, 314, 370, 534, 554, 1048, 1295, 1434, 1722
AcsI	RAATTY	3 cut(s)	71, 292, 386
AcuI	CTGAAG	1 cut(s)	1880
AfaI	GTAC	6 cut(s)	348, 916, 1227, 1285, 1718, 1763
AfiI	CCNNNNNNNGG	5 cut(s)	672, 865, 985, 1695, 1765
AflIII	ACRYGT	1 cut(s)	801
AgsI	TTSAA	3 cut(s)	89, 1031, 1784
AjnI	CCWGG	3 cut(s)	304, 978, 1297
AleI	CACNNNNGTG	1 cut(s)	331
AloI	GAACNNNNNNTCC	2 cut(s)	278, 310
Alw21I	GWGCWC	1 cut(s)	768
Alw26I	GTCTC	4 cut(s)	1155, 1254, 1280, 1625
AlwI	GGATC	2 cut(s)	444, 1473
AlwNI	CAGNNNCTG	1 cut(s)	23
Ama87I	CYCGRG	3 cut(s)	329, 1257, 1606
Aor13HI	TCCGGA	1 cut(s)	1834
ApeKI	GCWGC	3 cut(s)	92, 301, 455
ApoI	RAATTY	3 cut(s)	71, 292, 386
Asp700I	GAANNNNTTC	1 cut(s)	1796
Asp718I	GGTACC	1 cut(s)	346
AspLEI	GCGC	2 cut(s)	1333, 1493
AspS9I	GGNCC	6 cut(s)	182, 506, 856, 887, 962, 1070
AsuC2I	CCSGG	4 cut(s)	1381, 1607, 1608, 1759
AsuHPI	GGTGA	4 cut(s)	943, 1609, 1640, 1651
AsuII	TTCGAA	1 cut(s)	1115
AsuNHI	GCTAGC	1 cut(s)	608
AvaI	CYCGRG	3 cut(s)	329, 1257, 1606
AvaII	GGWCC	3 cut(s)	182, 887, 1070
BaeGI	GKGCMC	1 cut(s)	1899
BanI	GGYRCC	1 cut(s)	346
BbsI	GAAGAC	1 cut(s)	1712
Bbv12I	GWGCWC	1 cut(s)	768
BbvI	GCAGC	3 cut(s)	79, 313, 442
BccI	CCATC	5 cut(s)	221, 349, 1400, 1445, 1908
BceAI	ACGGC	1 cut(s)	190
BcgI	CGANNNNNNTGC	4 cut(s)	661, 695, 1413, 1447
BciT130I	CCWGG	3 cut(s)	306, 980, 1299
BclI	TGATCA	2 cut(s)	1504, 1878
BcnI	CCSGG	4 cut(s)	1381, 1607, 1608, 1759
BcoDI	GTCTC	4 cut(s)	1155, 1254, 1280, 1625
BfaI	CTAG	4 cut(s)	227, 279, 527, 609
BfmI	CTRYAG	1 cut(s)	688
BfoI	RGCGCY	1 cut(s)	1494
BglI	GCCNNNNNGGC	1 cut(s)	505
BisI	GCNGC	8 cut(s)	93, 302, 373, 453, 456, 537, 771, 1051
BlsI	GCNGC	8 cut(s)	94, 303, 374, 454, 457, 538, 772, 1052
BmcAI	AGTACT	1 cut(s)	1227
Bme1390I	CCNGG	7 cut(s)	306, 980, 1299, 1381, 1607, 1608, 1759
Bme18I	GGWCC	3 cut(s)	182, 887, 1070
BmeT110I	CYCGRG	3 cut(s)	329, 1257, 1606
BmgT120I	GGNCC	6 cut(s)	182, 506, 856, 887, 962, 1070
BmiI	GGNNCC	2 cut(s)	159, 348
BmrFI	CCNGG	7 cut(s)	306, 980, 1299, 1381, 1607, 1608, 1759
BmrI	ACTGGG	1 cut(s)	1298
BmsI	GCATC	3 cut(s)	414, 652, 1856
BmtI	GCTAGC	1 cut(s)	612
BmuI	ACTGGG	1 cut(s)	1298
BpiI	GAAGAC	1 cut(s)	1712
Bpu10I	CCTNAGC	4 cut(s)	580, 860, 1487, 1694
Bpu14I	TTCGAA	1 cut(s)	1115
BpuEI	CTTGAG	1 cut(s)	1262
BpuMI	CCSGG	4 cut(s)	1381, 1607, 1608, 1759
BsaAI	YACGTR	2 cut(s)	802, 1765
BsaI	GGTCTC	1 cut(s)	1280
BsaWI	WCCGGW	1 cut(s)	1834
Bsc4I	CCNNNNNNNGG	5 cut(s)	672, 865, 985, 1695, 1765
Bse118I	RCCGGY	1 cut(s)	260
Bse1I	ACTGG	3 cut(s)	278, 954, 1293
Bse3DI	GCAATG	1 cut(s)	1732
BseAI	TCCGGA	1 cut(s)	1834
BseBI	CCWGG	3 cut(s)	306, 980, 1299
BseGI	GGATG	7 cut(s)	360, 473, 730, 958, 978, 1021, 1871
BseLI	CCNNNNNNNGG	5 cut(s)	672, 865, 985, 1695, 1765
BseMI	GCAATG	1 cut(s)	1732
BseMII	CTCAG	4 cut(s)	408, 1472, 1478, 1901
BseNI	ACTGG	3 cut(s)	278, 954, 1293
BseRI	GAGGAG	3 cut(s)	581, 770, 1792
BseSI	GKGCMC	1 cut(s)	1899
BseX3I	CGGCCG	3 cut(s)	370, 554, 1048
BseXI	GCAGC	3 cut(s)	79, 313, 442
BsgI	GTGCAG	1 cut(s)	1010
Bsh1236I	CGCG	2 cut(s)	1333, 1497
Bsh1285I	CGRYCG	3 cut(s)	373, 557, 1051
BshNI	GGYRCC	1 cut(s)	346
BsiEI	CGRYCG	3 cut(s)	373, 557, 1051
BsiHKAI	GWGCWC	1 cut(s)	768
BsiHKCI	CYCGRG	3 cut(s)	329, 1257, 1606
BsiSI	CCGG	6 cut(s)	261, 1381, 1482, 1607, 1759, 1835
BslFI	GGGAC	2 cut(s)	1363, 1741
BslI	CCNNNNNNNGG	5 cut(s)	672, 865, 985, 1695, 1765
BsmAI	GTCTC	4 cut(s)	1155, 1254, 1280, 1625
BsmFI	GGGAC	2 cut(s)	1363, 1741
BsmI	GAATGC	3 cut(s)	1100, 1245, 1844
Bso31I	GGTCTC	1 cut(s)	1280
BsoBI	CYCGRG	3 cut(s)	329, 1257, 1606
Bsp119I	TTCGAA	1 cut(s)	1115
Bsp1286I	GDGCHC	2 cut(s)	768, 1899
Bsp13I	TCCGGA	1 cut(s)	1834
Bsp143I	GATC	6 cut(s)	436, 586, 1056, 1478, 1504, 1878
Bsp19I	CCATGG	1 cut(s)	1199
BspCNI	CTCAG	4 cut(s)	409, 1471, 1479, 1902
BspEI	TCCGGA	1 cut(s)	1834
BspFNI	CGCG	2 cut(s)	1333, 1497
BspLI	GGNNCC	2 cut(s)	159, 348
BspOI	GCTAGC	1 cut(s)	612
BspPI	GGATC	2 cut(s)	444, 1473
BspT104I	TTCGAA	1 cut(s)	1115
BspT107I	GGYRCC	1 cut(s)	346
BspTNI	GGTCTC	1 cut(s)	1280
BsrBI	CCGCTC	1 cut(s)	375
BsrDI	GCAATG	1 cut(s)	1732
BsrFI	RCCGGY	1 cut(s)	260
BsrI	ACTGG	3 cut(s)	278, 954, 1293
BssAI	RCCGGY	1 cut(s)	260
BssMI	GATC	6 cut(s)	436, 586, 1056, 1478, 1504, 1878
BssT1I	CCWWGG	5 cut(s)	883, 1131, 1199, 1235, 1787
Bst2UI	CCWGG	3 cut(s)	306, 980, 1299
Bst4CI	ACNGT	3 cut(s)	736, 914, 1039
Bst6I	CTCTTC	2 cut(s)	450, 1131
BstBAI	YACGTR	2 cut(s)	802, 1765
BstBI	TTCGAA	1 cut(s)	1115
BstC8I	GCNNGC	4 cut(s)	497, 610, 768, 1495
BstDEI	CTNAG	7 cut(s)	417, 580, 860, 1458, 1487, 1694, 1910
BstDSI	CCRYGG	3 cut(s)	350, 732, 1199
BstEII	GGTNACC	1 cut(s)	931
BstENI	CCTNNNNNAGG	1 cut(s)	1693
BstF5I	GGATG	7 cut(s)	360, 473, 730, 958, 978, 1021, 1871
BstFNI	CGCG	2 cut(s)	1333, 1497
BstH2I	RGCGCY	1 cut(s)	1494
BstHHI	GCGC	2 cut(s)	1333, 1493
BstKTI	GATC	6 cut(s)	439, 589, 1059, 1481, 1507, 1881
BstMAI	GTCTC	4 cut(s)	1155, 1254, 1280, 1625
BstMBI	GATC	6 cut(s)	436, 586, 1056, 1478, 1504, 1878
BstMCI	CGRYCG	3 cut(s)	373, 557, 1051
BstMWI	GCNNNNNNNGC	8 cut(s)	65, 101, 261, 505, 710, 763, 848, 1721
BstNI	CCWGG	3 cut(s)	306, 980, 1299
BstNSI	RCATGY	1 cut(s)	713
BstPI	GGTNACC	1 cut(s)	931
BstSCI	CCNGG	7 cut(s)	304, 978, 1297, 1379, 1605, 1606, 1757
BstSFI	CTRYAG	1 cut(s)	688
BstSLI	GKGCMC	1 cut(s)	1899
BstUI	CGCG	2 cut(s)	1333, 1497
BstV1I	GCAGC	3 cut(s)	79, 313, 442
BstV2I	GAAGAC	1 cut(s)	1712
BstX2I	RGATCY	1 cut(s)	1478
BstXI	CCANNNNNNTGG	1 cut(s)	312
BstYI	RGATCY	1 cut(s)	1478
BstZI	CGGCCG	3 cut(s)	370, 554, 1048
BtgI	CCRYGG	3 cut(s)	350, 732, 1199
BtsCI	GGATG	7 cut(s)	360, 473, 730, 958, 978, 1021, 1871
BtsIMutI	CAGTG	3 cut(s)	947, 1035, 1286
Cac8I	GCNNGC	4 cut(s)	497, 610, 768, 1495
CaiI	CAGNNNCTG	1 cut(s)	23
CfoI	GCGC	2 cut(s)	1333, 1493
Cfr10I	RCCGGY	1 cut(s)	260
Cfr13I	GGNCC	6 cut(s)	182, 506, 856, 887, 962, 1070
Cfr9I	CCCGGG	1 cut(s)	1606
CseI	GACGC	1 cut(s)	1322
Csp6I	GTAC	6 cut(s)	347, 915, 1226, 1284, 1717, 1762
CviQI	GTAC	6 cut(s)	347, 915, 1226, 1284, 1717, 1762
DdeI	CTNAG	7 cut(s)	417, 580, 860, 1458, 1487, 1694, 1910
DpnI	GATC	6 cut(s)	438, 588, 1058, 1480, 1506, 1880
DpnII	GATC	6 cut(s)	436, 586, 1056, 1478, 1504, 1878
EaeI	YGGCCR	9 cut(s)	3, 314, 370, 534, 554, 1048, 1295, 1434, 1722
EagI	CGGCCG	3 cut(s)	370, 554, 1048
Eam1104I	CTCTTC	2 cut(s)	450, 1131
EarI	CTCTTC	2 cut(s)	450, 1131
EciI	GGCGGA	1 cut(s)	279
EclXI	CGGCCG	3 cut(s)	370, 554, 1048
Eco130I	CCWWGG	5 cut(s)	883, 1131, 1199, 1235, 1787
Eco31I	GGTCTC	1 cut(s)	1280
Eco47I	GGWCC	3 cut(s)	182, 887, 1070
Eco52I	CGGCCG	3 cut(s)	370, 554, 1048
Eco57I	CTGAAG	1 cut(s)	1880
Eco88I	CYCGRG	3 cut(s)	329, 1257, 1606
Eco91I	GGTNACC	1 cut(s)	931
EcoNI	CCTNNNNNAGG	1 cut(s)	1693
EcoO109I	RGGNCCY	1 cut(s)	856
EcoO65I	GGTNACC	1 cut(s)	931
EcoRI	GAATTC	1 cut(s)	71
EcoRII	CCWGG	3 cut(s)	304, 978, 1297
EcoT14I	CCWWGG	5 cut(s)	883, 1131, 1199, 1235, 1787
ErhI	CCWWGG	5 cut(s)	883, 1131, 1199, 1235, 1787
FalI	AAGNNNNNCTT	2 cut(s)	1009, 1041
FaqI	GGGAC	2 cut(s)	1363, 1741
FauI	CCCGC	1 cut(s)	1502
FauNDI	CATATG	1 cut(s)	1148
FbaI	TGATCA	2 cut(s)	1504, 1878
FblI	GTMKAC	1 cut(s)	1906
Fnu4HI	GCNGC	8 cut(s)	93, 302, 373, 453, 456, 537, 771, 1051
FokI	GGATG	7 cut(s)	367, 460, 737, 965, 985, 1008, 1878
Fsp4HI	GCNGC	8 cut(s)	93, 302, 373, 453, 456, 537, 771, 1051
FspBI	CTAG	4 cut(s)	227, 279, 527, 609
GlaI	GCGC	2 cut(s)	1332, 1492
GluI	GCNGC	8 cut(s)	93, 302, 373, 453, 456, 537, 771, 1051
HaeII	RGCGCY	1 cut(s)	1494
HapII	CCGG	6 cut(s)	261, 1381, 1482, 1607, 1759, 1835
HgaI	GACGC	1 cut(s)	1322
HhaI	GCGC	2 cut(s)	1333, 1493
Hin6I	GCGC	2 cut(s)	1331, 1491
HinP1I	GCGC	2 cut(s)	1331, 1491
HincII	GTYRAC	3 cut(s)	144, 1539, 1907
HindII	GTYRAC	3 cut(s)	144, 1539, 1907
HinfI	GANTC	7 cut(s)	514, 1031, 1042, 1384, 1456, 1602, 1699
HpaII	CCGG	6 cut(s)	261, 1381, 1482, 1607, 1759, 1835
HphI	GGTGA	4 cut(s)	943, 1609, 1640, 1651
Hpy188I	TCNGA	6 cut(s)	19, 418, 1320, 1455, 1521, 1704
Hpy188III	TCNNGA	6 cut(s)	227, 1160, 1257, 1259, 1549, 1835
Hpy99I	CGWCG	1 cut(s)	1908
HpyAV	CCTTC	5 cut(s)	603, 1179, 1375, 1835, 1855
HpyCH4III	ACNGT	3 cut(s)	736, 914, 1039
HpyCH4IV	ACGT	2 cut(s)	801, 1764
HpyCH4V	TGCA	8 cut(s)	174, 713, 795, 810, 922, 991, 1079, 1181
HpyF10VI	GCNNNNNNNGC	8 cut(s)	65, 101, 261, 505, 710, 763, 848, 1721
HpyF3I	CTNAG	7 cut(s)	417, 580, 860, 1458, 1487, 1694, 1910
HpySE526I	ACGT	2 cut(s)	801, 1764
HspAI	GCGC	2 cut(s)	1331, 1491
Kpn2I	TCCGGA	1 cut(s)	1834
KpnI	GGTACC	1 cut(s)	350
Ksp22I	TGATCA	2 cut(s)	1504, 1878
Kzo9I	GATC	6 cut(s)	436, 586, 1056, 1478, 1504, 1878
LmnI	GCTCC	3 cut(s)	266, 358, 1242
Lsp1109I	GCAGC	3 cut(s)	79, 313, 442
LweI	GCATC	3 cut(s)	414, 652, 1856
MaeI	CTAG	4 cut(s)	227, 279, 527, 609
MaeII	ACGT	2 cut(s)	801, 1764
MaeIII	GTNAC	1 cut(s)	931
MalI	GATC	6 cut(s)	438, 588, 1058, 1480, 1506, 1880
MbiI	CCGCTC	1 cut(s)	375
MboI	GATC	6 cut(s)	436, 586, 1056, 1478, 1504, 1878
MboII	GAAGA	9 cut(s)	160, 349, 437, 1001, 1099, 1148, 1307, 1564, 1717
MfeI	CAATTG	2 cut(s)	62, 714
MflI	RGATCY	1 cut(s)	1478
MhlI	GDGCHC	2 cut(s)	768, 1899
MluCI	AATT	6 cut(s)	62, 71, 292, 386, 714, 1792
MlyI	GAGTC	2 cut(s)	523, 1450
MmeI	TCCRAC	5 cut(s)	263, 542, 937, 1544, 1834
MroI	TCCGGA	1 cut(s)	1834
MroXI	GAANNNNTTC	1 cut(s)	1796
MseI	TTAA	4 cut(s)	684, 1184, 1655, 1739
MslI	CAYNNNNRTG	2 cut(s)	331, 410
MspA1I	CMGCKG	1 cut(s)	455
MspI	CCGG	6 cut(s)	261, 1381, 1482, 1607, 1759, 1835
MspR9I	CCNGG	7 cut(s)	306, 980, 1299, 1381, 1607, 1608, 1759
MunI	CAATTG	2 cut(s)	62, 714
Mva1269I	GAATGC	3 cut(s)	1100, 1245, 1844
MvaI	CCWGG	3 cut(s)	306, 980, 1299
MvnI	CGCG	2 cut(s)	1333, 1497
MwoI	GCNNNNNNNGC	8 cut(s)	65, 101, 261, 505, 710, 763, 848, 1721
NciI	CCSGG	4 cut(s)	1381, 1607, 1608, 1759
NcoI	CCATGG	1 cut(s)	1199
NdeI	CATATG	1 cut(s)	1148
NdeII	GATC	6 cut(s)	436, 586, 1056, 1478, 1504, 1878
NheI	GCTAGC	1 cut(s)	608
NlaIV	GGNNCC	2 cut(s)	159, 348
NmeAIII	GCCGAG	3 cut(s)	745, 1026, 1750
NmuCI	GTSAC	1 cut(s)	931
NspI	RCATGY	1 cut(s)	713
NspV	TTCGAA	1 cut(s)	1115
OliI	CACNNNNGTG	1 cut(s)	331
PaeR7I	CTCGAG	1 cut(s)	1257
PctI	GAATGC	3 cut(s)	1100, 1245, 1844
PdmI	GAANNNNTTC	1 cut(s)	1796
PfeI	GAWTC	5 cut(s)	1031, 1042, 1384, 1602, 1699
PflFI	GACNNNGTC	1 cut(s)	1017
PfoI	TCCNGGA	1 cut(s)	1379
PkrI	GCNGC	8 cut(s)	94, 303, 374, 454, 457, 538, 772, 1052
PleI	GAGTC	2 cut(s)	522, 1450
PpsI	GAGTC	2 cut(s)	522, 1450
Ppu21I	YACGTR	2 cut(s)	802, 1765
Psp6I	CCWGG	3 cut(s)	304, 978, 1297
PspEI	GGTNACC	1 cut(s)	931
PspGI	CCWGG	3 cut(s)	304, 978, 1297
PspN4I	GGNNCC	2 cut(s)	159, 348
PspPI	GGNCC	6 cut(s)	182, 506, 856, 887, 962, 1070
PstNI	CAGNNNCTG	1 cut(s)	23
PsuI	RGATCY	1 cut(s)	1478
PsyI	GACNNNGTC	1 cut(s)	1017
RsaI	GTAC	6 cut(s)	348, 916, 1227, 1285, 1718, 1763
RsaNI	GTAC	6 cut(s)	347, 915, 1226, 1284, 1717, 1762
RseI	CAYNNNNRTG	2 cut(s)	331, 410
SalI	GTCGAC	1 cut(s)	1905
SaqAI	TTAA	4 cut(s)	684, 1184, 1655, 1739
SatI	GCNGC	8 cut(s)	93, 302, 373, 453, 456, 537, 771, 1051
Sau3AI	GATC	6 cut(s)	436, 586, 1056, 1478, 1504, 1878
Sau96I	GGNCC	6 cut(s)	182, 506, 856, 887, 962, 1070
ScaI	AGTACT	1 cut(s)	1227
SchI	GAGTC	2 cut(s)	523, 1450
ScrFI	CCNGG	7 cut(s)	306, 980, 1299, 1381, 1607, 1608, 1759
SduI	GDGCHC	2 cut(s)	768, 1899
SfaNI	GCATC	3 cut(s)	414, 652, 1856
SfcI	CTRYAG	1 cut(s)	688
Sfr274I	CTCGAG	1 cut(s)	1257
SfuI	TTCGAA	1 cut(s)	1115
SinI	GGWCC	3 cut(s)	182, 887, 1070
SlaI	CTCGAG	1 cut(s)	1257
SmaI	CCCGGG	1 cut(s)	1608
SmiMI	CAYNNNNRTG	2 cut(s)	331, 410
SmlI	CTYRAG	2 cut(s)	1257, 1277
SmoI	CTYRAG	2 cut(s)	1257, 1277
Sse9I	AATT	6 cut(s)	62, 71, 292, 386, 714, 1792
SspI	AATATT	1 cut(s)	543
SspMI	CTAG	4 cut(s)	227, 279, 527, 609
StyD4I	CCNGG	7 cut(s)	304, 978, 1297, 1379, 1605, 1606, 1757
StyI	CCWWGG	5 cut(s)	883, 1131, 1199, 1235, 1787
TaaI	ACNGT	3 cut(s)	736, 914, 1039
TaiI	ACGT	2 cut(s)	804, 1767
TasI	AATT	6 cut(s)	62, 71, 292, 386, 714, 1792
TatI	WGTACW	1 cut(s)	1225
TauI	GCSGC	5 cut(s)	375, 455, 539, 773, 1053
TfiI	GAWTC	5 cut(s)	1031, 1042, 1384, 1602, 1699
Tru1I	TTAA	4 cut(s)	684, 1184, 1655, 1739
Tru9I	TTAA	4 cut(s)	684, 1184, 1655, 1739
TscAI	CASTG	3 cut(s)	954, 1042, 1293
TseFI	GTSAC	1 cut(s)	931
TseI	GCWGC	3 cut(s)	92, 301, 455
Tsp45I	GTSAC	1 cut(s)	931
TspDTI	ATGAA	4 cut(s)	593, 992, 1336, 1386
TspGWI	ACGGA	2 cut(s)	367, 879
TspMI	CCCGGG	1 cut(s)	1606
TspRI	CASTG	3 cut(s)	954, 1042, 1293
Tth111I	GACNNNGTC	1 cut(s)	1017
VpaK11BI	GGWCC	3 cut(s)	182, 887, 1070
XagI	CCTNNNNNAGG	1 cut(s)	1693
XapI	RAATTY	3 cut(s)	71, 292, 386
XbaI	TCTAGA	1 cut(s)	226
XceI	RCATGY	1 cut(s)	713
XhoI	CTCGAG	1 cut(s)	1257
XmaI	CCCGGG	1 cut(s)	1606
XmiI	GTMKAC	1 cut(s)	1906
XmnI	GAANNNNTTC	1 cut(s)	1796
XspI	CTAG	4 cut(s)	227, 279, 527, 609
ZrmI	AGTACT	1 cut(s)	1227

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.