Rh6BG191100

Benzyl alcohol

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0000063
Physical Location & Seq
Reverse (-)
35588891 .. 35656944
68054 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG191100.1

Sequence Viewer

Length: 2646 bp
ATGAACACGCCGCTTTCCTTCTCTATTGGCTTTGTAAGTTTGTATGTTGCGCCAAGTCAAATAAGTGCACGTTTGAATTTGCTGGTATTGCGGAAGCTCTTAGTATGGGTAGGACCTCTAGCCCTTAGGCCATTTGTTCTTGCTCGCCTCTACCGCGCTTTGCGCAATGCAGTGATCGATAATATGAATTTGGATATTAAAGGGCCATTATGGATGTTTCAAGTGTGGATACAGACCTATTTTCATGAGCTCCGGCCAACATGTCCTCCATTTGTCCCCACAATGACACTTGGCCGTCAGATTATTGCCCTCGGCGCTCATACACATTCAGCCGCGCAGTGTCTTGCTTTCTTCTATTCGAAAAAGACTATGTCCAAAGATGAGTTTGCCATATGTTATAGCCGAGATCACCCTTCTTGCCTTGAGATTGACATATCAAAACCATGGGATAAAAAATTTGAATTGGATGTGATTCTGACTTGGGGAAGTTTTCTGATCTCTCGAGACCTGAACTATGGCCTCAAAGGCTATGGTGTGGAGAGGGATGGATTTACACGAACTTCACAGTGTTCGGCCGTCGGTAATTACTATGTGGAACAATTTGGCAAGTTTGAGAGATCCGGTCTAAAACCTCGTTGTCCTGACCATACAGCCACTCCAAATTTCCAAGCATGGTGGTCAACATTTATTGTGAAAAAAATTGGAGAAGACTTGGCCGAGATTCAGCGTGTTGCACTACGAGAGCTTCCAGACTTGCTTGGCCCCAAGGAAAGTAACGGTAAGAAGAAAGTATCAGATAACAAGTCAAAAACGACCAAAGGATCTTATAGACAAGGACAAACTCTGAGGAAACGTGGTTCAACGGTAAGACACACTCGAGATACCAAGAAAGCGAAGAAGTCCTCCGATATGGTAGAAAGTTCGGTCTCAGACCCGACCGACAATATGGTTAGTGAGGCTAATATAGATGATGGTCAAAATGCTTTAGCCAAAAGTCAAACTATGTCTAAAGCTGAAGATATGGCCGAAACTGGTGATGCCTCAGCCAATAGCGCGGACACTGCTGATAGCGAAGATTCTTCAGAAGAAGCTCAATCAAGAAGCGGCGATCAAGAGAGAGATGGCCGCATTGATCACTCTCTGCCCCTACTAGAAAATTCCATGATTGAGATTGACATGGACGACTTGGATGAGGACCAACTTCATAACACATCGAGCATCGGCCAACAGCTTGCCATATCAAACAAGTTTTCCAAAGATGTTGAAGACACCGATGTACTTGGCCGAGAAACACTACTTAAACATCAATCATTGGTTCAGGTGGGAGAATCCCGAAACAGTACAACCCTAGAATTGGCTCTTCCCAACCAAACTGAACCACACCCCCTATGTTCGGAACACTCACCTCTCCTCCTAATGATGGGATGTGTCAAAGTGATCGTTTGCTCTCCAATTTCGGCCGAACTTGTGGAGGTCTTTCCAATCAATAGCTTCTTGGCCAATCAAGACCAAACTTTGCCAAAAGTACGAATGCAAAGTGCTCTCTCTCTTAAAAAGAAGCTCTTGCGTCACCCAAGACTTTATGTAGTTTGTACCTATGACTATAGTATAGGATGCAAAGTCAGTGTTAAACATCAACTCAGATTGAATGAGAAAAGTTCTTGTATCACCCAAGATTCTATACAGTTTGTACCTTTGAATGTGACTCGCCTCAAGTGCGGCGGTTTCATCTTTGCCTTGCGTCTTAACCACACCATGAGTGACGCAGCCGGGCTCGTGCAATTCATGACGGCCGTGGGAGAGGTAGCGCGTGGCGCGCGTGTCCCCTCCATCTTACCAGTTTGGGGAAGGGAGGCATTCAAAGCTCGTGATCCACCACGTGTGACATGCACCCATCACGAGTACGATGATGTGCCAGATATCCATGGCACTCTTATCCCACTCGATGACATGGCTCACCGGTCGTTTTTCTTCAGGCCTACTGAGATATCCGCCATTCGTAGATTCCTCCCGGACCACCTCCGCAAGAGTTCTACATTTGAGATCCTCACGGCGGCTCTCTGGCGGTGCCGTACTATAGCCCTTCAGCCTAAAGACCCAGAACAGGAGGTCCGTGTGCTCTGCATTGTTAATGCACGTTCCAAAATAGTAAACCCTCCATTACCGACTGGTTTTTATGGCAATGCCTTTGCATTTCCTGTGGCACTCACATCTGCGGCCAAGCTTTGCCAGAACCCGCTCGGCTTTGCACTGGAGTTGGTGAAGTCCGCGAAGGCTGATGTGACCCAGGAGTACATGCGCTCGCTGGCAGATCTCATGGTCAACAGGGGCCGGCCTCATTTCACCGTGGTTGGTACATACCTCGTCTCAGATGTGACTCGTGCCGGGTTCGGAGATGTGGACTTTGGCTGGGGCAAGGCAGCTTATGGTGGTCCAGCAAAAGGTGGAGTGGGTGCTATACCTGGGGTGGCCAGCTTTTACATACCGTTCCGGGACAATAATGGAGAGGATGGAATTGTGGTGCCGGTTTGTTTACCAGCTCCGGCTATGGATAGGTTTGTGAAAGAAATTGATGGTATGCTGAAAGCCAATGCCATTGACTTGCCTCCTCAGACGTCCACTTCTTTTATTAAATGTGCCCTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transferase

Protein Analysis

881

Amino Acids

97.77

Weight (kDa)

8.13

Isoelectric Point (pI)

37.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 13 - 88 1.5e-09 Plant mobile domain
Transferase PF02458 561 - 857 2.7e-44 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000063)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21382 FvH4_1g29794 FvH4_1g29795 FvH4_2g35573 FvH4_2g35574 FvH4_4g18552 FvH4_5g16044
malus_domestica MD05G1017000.v1.1
prunus_persica Prupe.3G140800_v2.0.a1 Prupe.6G164100_v2.0.a1
pyrus_communis pycom01g04330 pycom03g19820 pycom04g06720 pycom06g11360 pycom06g19000 pycom10g08100 pycom13g16660 pycom13g27590 pycom13g27640 pycom13g27890 pycom16g11770 pycom16g19530
rosa_chinensis RchiOBHm_Chr1g0317341 RchiOBHm_Chr1g0317351 RchiOBHm_Chr1g0320431 RchiOBHm_Chr1g0320711 RchiOBHm_Chr1g0320721 RchiOBHm_Chr1g0321611 RchiOBHm_Chr1g0321621 RchiOBHm_Chr1g0321631 RchiOBHm_Chr1g0323651 RchiOBHm_Chr1g0332991 RchiOBHm_Chr1g0333001 RchiOBHm_Chr1g0335981 RchiOBHm_Chr1g0335991 RchiOBHm_Chr1g0336001 RchiOBHm_Chr1g0350201 RchiOBHm_Chr1g0368201 RchiOBHm_Chr2g0105531 RchiOBHm_Chr2g0105541 RchiOBHm_Chr2g0116571 RchiOBHm_Chr2g0116581 RchiOBHm_Chr2g0121071 RchiOBHm_Chr2g0131351 RchiOBHm_Chr2g0131661 RchiOBHm_Chr2g0133021 RchiOBHm_Chr2g0138181 RchiOBHm_Chr2g0138191 RchiOBHm_Chr2g0142701 RchiOBHm_Chr2g0142711 RchiOBHm_Chr2g0152981 RchiOBHm_Chr3g0456181 RchiOBHm_Chr3g0456191 RchiOBHm_Chr3g0493631 RchiOBHm_Chr3g0496201 RchiOBHm_Chr4g0401541 RchiOBHm_Chr4g0410311 RchiOBHm_Chr4g0410321 RchiOBHm_Chr4g0419231 RchiOBHm_Chr4g0419511 RchiOBHm_Chr4g0419521 RchiOBHm_Chr5g0004311 RchiOBHm_Chr5g0004321 RchiOBHm_Chr5g0038131 RchiOBHm_Chr5g0038251 RchiOBHm_Chr5g0038261 RchiOBHm_Chr5g0038271 RchiOBHm_Chr5g0052241 RchiOBHm_Chr5g0053911 RchiOBHm_Chr5g0074641 RchiOBHm_Chr5g0076651 RchiOBHm_Chr5g0076661 RchiOBHm_Chr6g0249161 RchiOBHm_Chr6g0249171 RchiOBHm_Chr6g0250961 RchiOBHm_Chr6g0253701 RchiOBHm_Chr6g0262131 RchiOBHm_Chr6g0263181 RchiOBHm_Chr6g0263231 RchiOBHm_Chr6g0263241 RchiOBHm_Chr6g0263251 RchiOBHm_Chr6g0291271 RchiOBHm_Chr7g0194611 RchiOBHm_Chr7g0219691 RchiOBHm_Chr7g0219701 RchiOBHm_Chr7g0225431 RchiOBHm_Chr7g0234221 RchiOBHm_Chr7g0238711 RchiOBHm_Chr7g0238721 RchiOBHm_Chr7g0238731 RchiOBHm_Chr7g0239611 RchiOBHm_Chr7g0239621
rosa_laevigata RLG00000001361 RLG00000001376 RLG00000001860 RLG00000002051 RLG00000002362 RLG00000008940 RLG00000012764 RLG00000018782 RLG00000029639 RLG00000030151
rosa_multiflora Rmu_co8090794.1_g000001 Rmu_co8135356.1_g000001 Rmu_co8224968.1_g000001 Rmu_sc0000016.1_g000020 Rmu_sc0000029.1_g000061 Rmu_sc0000035.1_g000032 Rmu_sc0000060.1_g000041 Rmu_sc0000148.1_g000041 Rmu_sc0000315.1_g000084 Rmu_sc0000527.1_g000005 Rmu_sc0000527.1_g000007 Rmu_sc0000527.1_g000008 Rmu_sc0000648.1_g000002 Rmu_sc0000762.1_g000076 Rmu_sc0000870.1_g000003 Rmu_sc0000870.1_g000004 Rmu_sc0000948.1_g000037 Rmu_sc0000997.1_g000003 Rmu_sc0001047.1_g000041 Rmu_sc0001047.1_g000042 Rmu_sc0001075.1_g000044 Rmu_sc0001174.1_g000006 Rmu_sc0001235.1_g000025 Rmu_sc0001292.1_g000008 Rmu_sc0001301.1_g000038 Rmu_sc0001461.1_g000069 Rmu_sc0001461.1_g000070 Rmu_sc0001669.1_g000041 Rmu_sc0001689.1_g000027 Rmu_sc0001896.1_g000008 Rmu_sc0001909.1_g000013 Rmu_sc0002170.1_g000038 Rmu_sc0002200.1_g000014 Rmu_sc0002283.1_g000027 Rmu_sc0002284.1_g000014 Rmu_sc0002294.1_g000017 Rmu_sc0002294.1_g000018 Rmu_sc0002307.1_g000020 Rmu_sc0002307.1_g000021 Rmu_sc0002307.1_g000023 Rmu_sc0002357.1_g000054 Rmu_sc0002409.1_g000005 Rmu_sc0002535.1_g000002 Rmu_sc0002589.1_g000014 Rmu_sc0002759.1_g000016 Rmu_sc0002759.1_g000017 Rmu_sc0002777.1_g000015 Rmu_sc0002824.1_g000016 Rmu_sc0002872.1_g000005 Rmu_sc0002872.1_g000012 Rmu_sc0002872.1_g000013 Rmu_sc0002942.1_g000019 Rmu_sc0003337.1_g000001 Rmu_sc0003410.1_g000052 Rmu_sc0003445.1_g000010 Rmu_sc0003773.1_g000007 Rmu_sc0003773.1_g000008 Rmu_sc0003895.1_g000002 Rmu_sc0004063.1_g000006 Rmu_sc0004088.1_g000009 Rmu_sc0004088.1_g000010 Rmu_sc0004174.1_g000027 Rmu_sc0004196.1_g000010 Rmu_sc0004515.1_g000006 Rmu_sc0004727.1_g000010 Rmu_sc0004755.1_g000018 Rmu_sc0005016.1_g000030 Rmu_sc0005026.1_g000001 Rmu_sc0005044.1_g000007 Rmu_sc0005284.1_g000001 Rmu_sc0005431.1_g000030 Rmu_sc0005802.1_g000014 Rmu_sc0005802.1_g000015 Rmu_sc0005994.1_g000004 Rmu_sc0005994.1_g000005 Rmu_sc0006059.1_g000048 Rmu_sc0006583.1_g000013 Rmu_sc0006824.1_g000009 Rmu_sc0007458.1_g000005 Rmu_sc0007707.1_g000002 Rmu_sc0008242.1_g000012 Rmu_sc0008713.1_g000006 Rmu_sc0008770.1_g000008 Rmu_sc0009785.1_g000004 Rmu_sc0009785.1_g000005 Rmu_sc0010125.1_g000001 Rmu_sc0010211.1_g000004 Rmu_sc0011034.1_g000001 Rmu_sc0011833.1_g000006 Rmu_sc0014851.1_g000001 Rmu_sc0014899.1_g000001 Rmu_sc0015060.1_g000003 Rmu_sc0015186.1_g000001 Rmu_sc0015248.1_g000003 Rmu_sc0015248.1_g000004 Rmu_sc0015314.1_g000001 Rmu_sc0018098.1_g000002 Rmu_sc0022706.1_g000004 Rmu_sc0023350.1_g000002 Rmu_sc0027636.1_g000001 Rmu_sc0027672.1_g000003 Rmu_sc0030879.1_g000001 Rmu_ssc0000008.1_g000029 Rmu_ssc0000019.1_g000014 Rmu_ssc0000050.1_g000082 Rmu_ssc0000282.1_g000004 Rmu_ssc0000311.1_g000010
rosa_roxburghii Rroxscaffold_1G00015190 Rroxscaffold_1G00031880 Rroxscaffold_1G00031890 Rroxscaffold_1G00059310 Rroxscaffold_1G00060420 Rroxscaffold_1G00067930 Rroxscaffold_1G00075030 Rroxscaffold_2G00082210 Rroxscaffold_2G00122970 Rroxscaffold_3G00218230 Rroxscaffold_3G00219020 Rroxscaffold_3G00219030 Rroxscaffold_3G00223680 Rroxscaffold_3G00223690 Rroxscaffold_3G00223700 Rroxscaffold_3G00226870 Rroxscaffold_3G00226880 Rroxscaffold_3G00232990 Rroxscaffold_3G00265610 Rroxscaffold_3G00265620 Rroxscaffold_3G00265630 Rroxscaffold_4G00318660 Rroxscaffold_4G00319060 Rroxscaffold_4G00323500 Rroxscaffold_5G00357520 Rroxscaffold_5G00366150 Rroxscaffold_5G00377470 Rroxscaffold_6G00395700 Rroxscaffold_6G00413950 Rroxscaffold_7G00187650 Rroxscaffold_7G00198290 Rroxscaffold_7G00198300 Rroxscaffold_7G00208060
rosa_rugosa Rorug01G0173900 Rorug01G0174000 Rorug01G0174100 Rorug01G0174100 Rorug02G0341200 Rorug04G0135700 Rorug04G0135800 Rorug05G0032500 Rorug06G0021800
rosa_samantha Rh1AG036600 Rh1AG245800 Rh1CG021700 Rh1CG021800 Rh1CG085800 Rh1CG085900 Rh1CG187900 Rh1CG229600 Rh1CG239600 Rh1CG246500 Rh1CG246600 Rh2BG478100 Rh2DG341300 Rh2DG366600 Rh2DG375700 Rh2DG384300 Rh2DG487000 Rh2DG504000 Rh2DG504100 Rh3AG311800 Rh3AG327500 Rh3AG328300 Rh3BG345100 Rh3CG320100 Rh4AG005700 Rh4AG067900 Rh4AG068000 Rh4AG084400 Rh4AG106700 Rh4AG160000 Rh4AG173900 Rh4AG174000 Rh4CG125300 Rh4CG125500 Rh4CG264500 Rh4DG110800 Rh5AG047300 Rh5AG085200 Rh5AG126300 Rh5AG127300 Rh5AG203000 Rh5AG332400 Rh5AG332500 Rh5AG342400 Rh5AG344100 Rh5AG375600 Rh5AG378300 Rh5AG386000 Rh5AG529600 Rh5BG125200 Rh5CG137600 Rh5CG137700 Rh5DG125200 Rh6BG134100 Rh6BG175400 Rh6BG179500 Rh6BG179600 Rh6BG181600 Rh6BG181700 Rh6BG191100 Rh6BG232900 Rh6BG259700 Rh6BG259800 Rh7AG028000 Rh7AG319400 Rh7AG352700 Rh7AG352800 Rh7AG352900 Rh7AG482500 Rh7AG482600 Rh7AG503800 Rh7BG334700 Rh7CG200100 Rh7CG336200 Rh7CG370200 Rh7CG370400 Rh7CG370500
rosa_wichuraiana Rw1G001580 Rw1G003570 Rw1G004260 Rw1G004270 Rw1G021170 Rw2G019390 Rw2G040280 Rw2G044050 Rw4G004430 Rw5G010950 Rw5G018350 Rw5G032890 Rw6G002840 Rw6G006510 Rw6G007780 Rw6G033790 Rw7G036320 Rw7G040550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 2618
Acc16I TGCGCA 1 cut(s) 164
AccB1I GGYRCC 2 cut(s) 2067, 2521
AccBSI CCGCTC 1 cut(s) 2239
AccII CGCG 7 cut(s) 156, 335, 1055, 1810, 1817, 1819, 2270
AclWI GGATC 4 cut(s) 612, 829, 1865, 2038
AcsI RAATTY 5 cut(s) 76, 187, 455, 661, 1156
AcuI CTGAAG 4 cut(s) 1035, 1065, 1957, 2069
AcvI CACGTG 1 cut(s) 1880
AcyI GRCGYC 1 cut(s) 2615
AdeI CACNNNGTG 1 cut(s) 1880
AfaI GTAC 9 cut(s) 1278, 1342, 1527, 1594, 1692, 1904, 2074, 2294, 2356
AfiI CCNNNNNNNGG 7 cut(s) 1354, 1393, 1420, 1844, 2053, 2104, 2441
AflIII ACRYGT 2 cut(s) 260, 1879
AgeI ACCGGT 1 cut(s) 1959
AgsI TTSAA 8 cut(s) 76, 221, 461, 861, 1265, 1648, 1699, 1861
AjnI CCWGG 2 cut(s) 2286, 2461
AloI GAACNNNNNNTCC 4 cut(s) 841, 873, 2094, 2126
Alw21I GWGCWC 4 cut(s) 70, 252, 1543, 2121
Alw26I GTCTC 3 cut(s) 498, 931, 2371
Alw44I GTGCAC 1 cut(s) 66
AlwI GGATC 4 cut(s) 612, 829, 1865, 2038
Ama87I CYCGRG 2 cut(s) 501, 876
ApaLI GTGCAC 1 cut(s) 66
ApeKI GCWGC 2 cut(s) 1766, 2420
ApoI RAATTY 5 cut(s) 76, 187, 455, 661, 1156
AsiGI ACCGGT 1 cut(s) 1959
AspS9I GGNCC 8 cut(s) 113, 203, 761, 1195, 2014, 2110, 2329, 2432
AsuC2I CCSGG 4 cut(s) 1771, 2012, 2386, 2492
AsuHPI GGTGA 8 cut(s) 401, 1046, 1395, 1562, 1660, 1949, 2272, 2335
AsuII TTCGAA 1 cut(s) 359
AvaI CYCGRG 2 cut(s) 501, 876
AvaII GGWCC 5 cut(s) 113, 1195, 2014, 2110, 2432
AxyI CCTNAGG 1 cut(s) 125
BaeGI GKGCMC 2 cut(s) 70, 2641
BalI TGGCCA 2 cut(s) 1499, 2471
BanI GGYRCC 2 cut(s) 2067, 2521
BanII GRGCYC 2 cut(s) 252, 1776
BauI CACGAG 4 cut(s) 1775, 1866, 1898, 2379
BbrPI CACGTG 1 cut(s) 1880
BbsI GAAGAC 2 cut(s) 714, 1272
Bbv12I GWGCWC 4 cut(s) 70, 252, 1543, 2121
BbvCI CCTCAGC 1 cut(s) 1042
BbvI GCAGC 2 cut(s) 1778, 2432
BccI CCATC 8 cut(s) 539, 965, 1115, 1414, 1838, 1902, 2504, 2567
BceAI ACGGC 6 cut(s) 279, 560, 1778, 1806, 2055, 2067
BciT130I CCWGG 2 cut(s) 2288, 2463
BciVI GTATCC 1 cut(s) 222
BclI TGATCA 1 cut(s) 1132
BcnI CCSGG 4 cut(s) 1771, 2012, 2386, 2492
BcoDI GTCTC 3 cut(s) 498, 931, 2371
BfaI CTAG 3 cut(s) 119, 1151, 1349
BfmI CTRYAG 2 cut(s) 1603, 2076
BfoI RGCGCY 1 cut(s) 318
BfuI GTATCC 1 cut(s) 222
BglI GCCNNNNNGGC 1 cut(s) 525
BglII AGATCT 1 cut(s) 2311
BisI GCNGC 9 cut(s) 11, 333, 1105, 1126, 1720, 1767, 2055, 2217, 2421
BlsI GCNGC 9 cut(s) 12, 334, 1106, 1127, 1721, 1768, 2056, 2218, 2422
Bme1390I CCNGG 6 cut(s) 1771, 2012, 2288, 2386, 2463, 2492
Bme18I GGWCC 5 cut(s) 113, 1195, 2014, 2110, 2432
BmeT110I CYCGRG 2 cut(s) 501, 876
BmgT120I GGNCC 8 cut(s) 113, 203, 761, 1195, 2014, 2110, 2329, 2432
BmiI GGNNCC 4 cut(s) 763, 2069, 2330, 2523
BmrFI CCNGG 6 cut(s) 1771, 2012, 2288, 2386, 2463, 2492
BmsI GCATC 3 cut(s) 1027, 1227, 1604
BpiI GAAGAC 2 cut(s) 714, 1272
BpmI CTGGAG 1 cut(s) 2273
Bpu10I CCTNAGC 1 cut(s) 1042
Bpu14I TTCGAA 1 cut(s) 359
BpuEI CTTGAG 2 cut(s) 443, 1697
BpuMI CCSGG 4 cut(s) 1771, 2012, 2386, 2492
Bsa29I ATCGAT 1 cut(s) 177
BsaAI YACGTR 1 cut(s) 1880
BsaHI GRCGYC 1 cut(s) 2615
BsaI GGTCTC 2 cut(s) 498, 931
BsaJI CCNNGG 8 cut(s) 310, 443, 765, 1794, 1924, 2286, 2346, 2462
BsaWI WCCGGW 2 cut(s) 620, 1959
BsaXI ACNNNNNCTCC 6 cut(s) 250, 280, 640, 670, 1395, 1425
Bsc4I CCNNNNNNNGG 7 cut(s) 1354, 1393, 1420, 1844, 2053, 2104, 2441
Bse118I RCCGGY 3 cut(s) 1959, 2331, 2524
Bse1I ACTGG 4 cut(s) 1036, 1838, 2173, 2256
Bse21I CCTNAGG 1 cut(s) 125
Bse3DI GCAATG 2 cut(s) 172, 2188
BseBI CCWGG 2 cut(s) 2288, 2463
BseCI ATCGAT 1 cut(s) 177
BseDI CCNNGG 8 cut(s) 310, 443, 765, 1794, 1924, 2286, 2346, 2462
BseGI GGATG 7 cut(s) 219, 472, 550, 1195, 1430, 1619, 2515
BseLI CCNNNNNNNGG 7 cut(s) 1354, 1393, 1420, 1844, 2053, 2104, 2441
BseMI GCAATG 2 cut(s) 172, 2188
BseMII CTCAG 7 cut(s) 836, 942, 1056, 1654, 1974, 2382, 2624
BseNI ACTGG 4 cut(s) 1036, 1838, 2173, 2256
BsePI GCGCGC 1 cut(s) 1815
BseRI GAGGAG 2 cut(s) 1400, 2598
BseSI GKGCMC 2 cut(s) 70, 2641
BseX3I CGGCCG 3 cut(s) 573, 1458, 1791
BseXI GCAGC 2 cut(s) 1778, 2432
BseYI CCCAGC 1 cut(s) 2409
Bsh1236I CGCG 7 cut(s) 156, 335, 1055, 1810, 1817, 1819, 2270
Bsh1285I CGRYCG 5 cut(s) 576, 939, 1461, 1794, 1964
BshNI GGYRCC 2 cut(s) 2067, 2521
BshTI ACCGGT 1 cut(s) 1959
BshVI ATCGAT 1 cut(s) 177
BsiEI CGRYCG 5 cut(s) 576, 939, 1461, 1794, 1964
BsiHKAI GWGCWC 4 cut(s) 70, 252, 1543, 2121
BsiHKCI CYCGRG 2 cut(s) 501, 876
BslFI GGGAC 3 cut(s) 260, 1808, 2507
BslI CCNNNNNNNGG 7 cut(s) 1354, 1393, 1420, 1844, 2053, 2104, 2441
BsmAI GTCTC 3 cut(s) 498, 931, 2371
BsmBI CGTCTC 1 cut(s) 2371
BsmFI GGGAC 3 cut(s) 260, 1808, 2507
BsmI GAATGC 2 cut(s) 1536, 1856
Bso31I GGTCTC 2 cut(s) 498, 931
BsoBI CYCGRG 2 cut(s) 501, 876
Bsp119I TTCGAA 1 cut(s) 359
Bsp1286I GDGCHC 6 cut(s) 70, 252, 1543, 1776, 2121, 2641
Bsp19I CCATGG 2 cut(s) 443, 1924
BspCNI CTCAG 7 cut(s) 837, 941, 1055, 1653, 1975, 2381, 2623
BspDI ATCGAT 1 cut(s) 177
BspFNI CGCG 7 cut(s) 156, 335, 1055, 1810, 1817, 1819, 2270
BspHI TCATGA 2 cut(s) 244, 1785
BspLI GGNNCC 4 cut(s) 763, 2069, 2330, 2523
BspPI GGATC 4 cut(s) 612, 829, 1865, 2038
BspQI GCTCTTC 1 cut(s) 1365
BspT104I TTCGAA 1 cut(s) 359
BspT107I GGYRCC 2 cut(s) 2067, 2521
BspTNI GGTCTC 2 cut(s) 498, 931
BsrBI CCGCTC 1 cut(s) 2239
BsrDI GCAATG 2 cut(s) 172, 2188
BsrFI RCCGGY 3 cut(s) 1959, 2331, 2524
BsrI ACTGG 4 cut(s) 1036, 1838, 2173, 2256
BssAI RCCGGY 3 cut(s) 1959, 2331, 2524
BssECI CCNNGG 8 cut(s) 310, 443, 765, 1794, 1924, 2286, 2346, 2462
BssHII GCGCGC 1 cut(s) 1815
BssNI GRCGYC 1 cut(s) 2615
BssSI CACGAG 4 cut(s) 1775, 1866, 1898, 2379
BssT1I CCWWGG 3 cut(s) 443, 765, 1924
Bst2BI CACGAG 4 cut(s) 1775, 1866, 1898, 2379
Bst2UI CCWGG 2 cut(s) 2288, 2463
Bst4CI ACNGT 7 cut(s) 567, 779, 865, 1340, 1686, 2347, 2487
Bst6I CTCTTC 1 cut(s) 1365
BstACI GRCGYC 1 cut(s) 2615
BstBAI YACGTR 1 cut(s) 1880
BstBI TTCGAA 1 cut(s) 359
BstC8I GCNNGC 7 cut(s) 145, 1233, 1817, 2303, 2307, 2333, 2473
BstDEI CTNAG 9 cut(s) 100, 125, 845, 928, 1042, 1640, 1983, 2368, 2610
BstDSI CCRYGG 4 cut(s) 443, 1794, 1924, 2346
BstF5I GGATG 7 cut(s) 219, 472, 550, 1195, 1430, 1619, 2515
BstFNI CGCG 7 cut(s) 156, 335, 1055, 1810, 1817, 1819, 2270
BstH2I RGCGCY 1 cut(s) 318
BstMAI GTCTC 3 cut(s) 498, 931, 2371
BstMCI CGRYCG 5 cut(s) 576, 939, 1461, 1794, 1964
BstNI CCWGG 2 cut(s) 2288, 2463
BstNSI RCATGY 3 cut(s) 264, 1890, 2299
BstSCI CCNGG 6 cut(s) 1769, 2010, 2286, 2384, 2461, 2490
BstSFI CTRYAG 2 cut(s) 1603, 2076
BstSLI GKGCMC 2 cut(s) 70, 2641
BstUI CGCG 7 cut(s) 156, 335, 1055, 1810, 1817, 1819, 2270
BstV1I GCAGC 2 cut(s) 1778, 2432
BstV2I GAAGAC 2 cut(s) 714, 1272
BstX2I RGATCY 4 cut(s) 617, 821, 2043, 2311
BstYI RGATCY 4 cut(s) 617, 821, 2043, 2311
BstZI CGGCCG 3 cut(s) 573, 1458, 1791
Bsu15I ATCGAT 1 cut(s) 177
Bsu36I CCTNAGG 1 cut(s) 125
BsuI GTATCC 1 cut(s) 222
BsuTUI ATCGAT 1 cut(s) 177
BtgI CCRYGG 4 cut(s) 443, 1794, 1924, 2346
BtsCI GGATG 7 cut(s) 219, 472, 550, 1195, 1430, 1619, 2515
BtsI GCAGTG 3 cut(s) 177, 344, 1059
BtsIMutI CAGTG 6 cut(s) 177, 344, 572, 1059, 1630, 2249
Cac8I GCNNGC 7 cut(s) 145, 1233, 1817, 2303, 2307, 2333, 2473
CciI TCATGA 2 cut(s) 244, 1785
Cfr10I RCCGGY 3 cut(s) 1959, 2331, 2524
Cfr13I GGNCC 8 cut(s) 113, 203, 761, 1195, 2014, 2110, 2329, 2432
ClaI ATCGAT 1 cut(s) 177
CseI GACGC 3 cut(s) 1556, 1730, 1772
Csp6I GTAC 9 cut(s) 1277, 1341, 1526, 1593, 1691, 1903, 2073, 2293, 2355
CspAI ACCGGT 1 cut(s) 1959
CspCI CAANNNNNGTGG 2 cut(s) 656, 691
CviQI GTAC 9 cut(s) 1277, 1341, 1526, 1593, 1691, 1903, 2073, 2293, 2355
DdeI CTNAG 9 cut(s) 100, 125, 845, 928, 1042, 1640, 1983, 2368, 2610
DraIII CACNNNGTG 1 cut(s) 1880
EagI CGGCCG 3 cut(s) 573, 1458, 1791
Eam1104I CTCTTC 1 cut(s) 1365
EarI CTCTTC 1 cut(s) 1365
EciI GGCGGA 1 cut(s) 1981
Ecl136II GAGCTC 1 cut(s) 250
EclXI CGGCCG 3 cut(s) 573, 1458, 1791
Eco130I CCWWGG 3 cut(s) 443, 765, 1924
Eco147I AGGCCT 1 cut(s) 1978
Eco24I GRGCYC 2 cut(s) 252, 1776
Eco31I GGTCTC 2 cut(s) 498, 931
Eco32I GATATC 2 cut(s) 1921, 1989
Eco47I GGWCC 5 cut(s) 113, 1195, 2014, 2110, 2432
Eco52I CGGCCG 3 cut(s) 573, 1458, 1791
Eco53kI GAGCTC 1 cut(s) 250
Eco57I CTGAAG 4 cut(s) 1035, 1065, 1957, 2069
Eco72I CACGTG 1 cut(s) 1880
Eco81I CCTNAGG 1 cut(s) 125
Eco88I CYCGRG 2 cut(s) 501, 876
EcoICRI GAGCTC 1 cut(s) 250
EcoO109I RGGNCCY 1 cut(s) 113
EcoRII CCWGG 2 cut(s) 2286, 2461
EcoRV GATATC 2 cut(s) 1921, 1989
EcoT14I CCWWGG 3 cut(s) 443, 765, 1924
EcoT38I GRGCYC 2 cut(s) 252, 1776
ErhI CCWWGG 3 cut(s) 443, 765, 1924
Esp3I CGTCTC 1 cut(s) 2371
FalI AAGNNNNNCTT 2 cut(s) 1547, 1579
FaqI GGGAC 3 cut(s) 260, 1808, 2507
FauI CCCGC 1 cut(s) 2244
FauNDI CATATG 1 cut(s) 392
FbaI TGATCA 1 cut(s) 1132
Fnu4HI GCNGC 9 cut(s) 11, 333, 1105, 1126, 1720, 1767, 2055, 2217, 2421
FokI GGATG 7 cut(s) 226, 479, 557, 1202, 1437, 1626, 2522
FriOI GRGCYC 2 cut(s) 252, 1776
FseI GGCCGGCC 1 cut(s) 2335
Fsp4HI GCNGC 9 cut(s) 11, 333, 1105, 1126, 1720, 1767, 2055, 2217, 2421
FspBI CTAG 3 cut(s) 119, 1151, 1349
FspI TGCGCA 1 cut(s) 164
GluI GCNGC 9 cut(s) 11, 333, 1105, 1126, 1720, 1767, 2055, 2217, 2421
GsaI CCCAGC 1 cut(s) 2413
GsuI CTGGAG 1 cut(s) 2273
HaeII RGCGCY 1 cut(s) 318
HgaI GACGC 3 cut(s) 1556, 1730, 1772
Hin1I GRCGYC 1 cut(s) 2615
HincII GTYRAC 2 cut(s) 681, 2323
HindII GTYRAC 2 cut(s) 681, 2323
HindIII AAGCTT 1 cut(s) 2222
HinfI GANTC 8 cut(s) 472, 721, 1076, 1328, 1676, 1705, 2004, 2377
HphI GGTGA 8 cut(s) 401, 1046, 1395, 1562, 1660, 1949, 2272, 2335
Hpy166II GTNNAC 7 cut(s) 68, 681, 2152, 2323, 2401, 2534, 2619
Hpy8I GTNNAC 7 cut(s) 68, 681, 2152, 2323, 2401, 2534, 2619
Hpy99I CGWCG 1 cut(s) 581
HpyAV CCTTC 5 cut(s) 28, 423, 1842, 2093, 2266
HpyCH4III ACNGT 7 cut(s) 567, 779, 865, 1340, 1686, 2347, 2487
HpyCH4IV ACGT 5 cut(s) 70, 853, 1879, 2137, 2615
HpyF3I CTNAG 9 cut(s) 100, 125, 845, 928, 1042, 1640, 1983, 2368, 2610
HpySE526I ACGT 5 cut(s) 70, 853, 1879, 2137, 2615
Hsp92I GRCGYC 1 cut(s) 2615
KroI GCCGGC 1 cut(s) 2331
KroNI GCCGGC 1 cut(s) 2333
Ksp22I TGATCA 1 cut(s) 1132
LguI GCTCTTC 1 cut(s) 1365
LmnI GCTCC 2 cut(s) 255, 2545
Lsp1109I GCAGC 2 cut(s) 1778, 2432
LweI GCATC 3 cut(s) 1027, 1227, 1604
MaeI CTAG 3 cut(s) 119, 1151, 1349
MaeII ACGT 5 cut(s) 70, 853, 1879, 2137, 2615
MaeIII GTNAC 7 cut(s) 773, 1568, 1702, 1760, 1882, 2281, 2374
MbiI CCGCTC 1 cut(s) 2239
MflI RGATCY 4 cut(s) 617, 821, 2043, 2311
MhlI GDGCHC 6 cut(s) 70, 252, 1543, 1776, 2121, 2641
MlsI TGGCCA 2 cut(s) 1499, 2471
MluNI TGGCCA 2 cut(s) 1499, 2471
MlyI GAGTC 2 cut(s) 1699, 2371
Mox20I TGGCCA 2 cut(s) 1499, 2471
MroNI GCCGGC 1 cut(s) 2331
MscI TGGCCA 2 cut(s) 1499, 2471
MseI TTAA 7 cut(s) 198, 1299, 1551, 1629, 1746, 2130, 2631
Msp20I TGGCCA 2 cut(s) 1499, 2471
MspR9I CCNGG 6 cut(s) 1771, 2012, 2288, 2386, 2463, 2492
Mva1269I GAATGC 2 cut(s) 1536, 1856
MvaI CCWGG 2 cut(s) 2288, 2463
MvnI CGCG 7 cut(s) 156, 335, 1055, 1810, 1817, 1819, 2270
NaeI GCCGGC 1 cut(s) 2333
NciI CCSGG 4 cut(s) 1771, 2012, 2386, 2492
NcoI CCATGG 2 cut(s) 443, 1924
NdeI CATATG 1 cut(s) 392
NgoMIV GCCGGC 1 cut(s) 2331
NlaIV GGNNCC 4 cut(s) 763, 2069, 2330, 2523
NmeAIII GCCGAG 5 cut(s) 291, 428, 742, 1310, 2220
NmuCI GTSAC 6 cut(s) 1568, 1702, 1760, 1882, 2281, 2374
NsbI TGCGCA 1 cut(s) 164
NspI RCATGY 3 cut(s) 264, 1890, 2299
NspV TTCGAA 1 cut(s) 359
PaeR7I CTCGAG 2 cut(s) 501, 876
PagI TCATGA 2 cut(s) 244, 1785
PauI GCGCGC 1 cut(s) 1815
PceI AGGCCT 1 cut(s) 1978
PciI ACATGT 1 cut(s) 260
PciSI GCTCTTC 1 cut(s) 1365
PctI GAATGC 2 cut(s) 1536, 1856
PdiI GCCGGC 1 cut(s) 2333
PfeI GAWTC 6 cut(s) 472, 721, 1076, 1328, 1676, 2004
PflFI GACNNNGTC 1 cut(s) 370
PfoI TCCNGGA 2 cut(s) 2010, 2490
PinAI ACCGGT 1 cut(s) 1959
PkrI GCNGC 9 cut(s) 12, 334, 1106, 1127, 1721, 1768, 2056, 2218, 2422
PleI GAGTC 2 cut(s) 1699, 2371
PmaCI CACGTG 1 cut(s) 1880
PmlI CACGTG 1 cut(s) 1880
PpsI GAGTC 2 cut(s) 1699, 2371
Ppu21I YACGTR 1 cut(s) 1880
PpuMI RGGWCCY 1 cut(s) 113
PscI ACATGT 1 cut(s) 260
Psp124BI GAGCTC 1 cut(s) 252
Psp5II RGGWCCY 1 cut(s) 113
Psp6I CCWGG 2 cut(s) 2286, 2461
PspCI CACGTG 1 cut(s) 1880
PspFI CCCAGC 1 cut(s) 2409
PspGI CCWGG 2 cut(s) 2286, 2461
PspN4I GGNNCC 4 cut(s) 763, 2069, 2330, 2523
PspPI GGNCC 8 cut(s) 113, 203, 761, 1195, 2014, 2110, 2329, 2432
PspPPI RGGWCCY 1 cut(s) 113
PsuI RGATCY 4 cut(s) 617, 821, 2043, 2311
PsyI GACNNNGTC 1 cut(s) 370
PteI GCGCGC 1 cut(s) 1815
RigI GGCCGGCC 1 cut(s) 2335
RsaI GTAC 9 cut(s) 1278, 1342, 1527, 1594, 1692, 1904, 2074, 2294, 2356
RsaNI GTAC 9 cut(s) 1277, 1341, 1526, 1593, 1691, 1903, 2073, 2293, 2355
SacI GAGCTC 1 cut(s) 252
SapI GCTCTTC 1 cut(s) 1365
SaqAI TTAA 7 cut(s) 198, 1299, 1551, 1629, 1746, 2130, 2631
SatI GCNGC 9 cut(s) 11, 333, 1105, 1126, 1720, 1767, 2055, 2217, 2421
Sau96I GGNCC 8 cut(s) 113, 203, 761, 1195, 2014, 2110, 2329, 2432
SchI GAGTC 2 cut(s) 1699, 2371
ScrFI CCNGG 6 cut(s) 1771, 2012, 2288, 2386, 2463, 2492
SduI GDGCHC 6 cut(s) 70, 252, 1543, 1776, 2121, 2641
SfaNI GCATC 3 cut(s) 1027, 1227, 1604
SfcI CTRYAG 2 cut(s) 1603, 2076
Sfr274I CTCGAG 2 cut(s) 501, 876
SfuI TTCGAA 1 cut(s) 359
SinI GGWCC 5 cut(s) 113, 1195, 2014, 2110, 2432
SlaI CTCGAG 2 cut(s) 501, 876
SmlI CTYRAG 4 cut(s) 422, 501, 876, 1712
SmoI CTYRAG 4 cut(s) 422, 501, 876, 1712
SseBI AGGCCT 1 cut(s) 1978
SspMI CTAG 3 cut(s) 119, 1151, 1349
SstI GAGCTC 1 cut(s) 252
StuI AGGCCT 1 cut(s) 1978
StyD4I CCNGG 6 cut(s) 1769, 2010, 2286, 2384, 2461, 2490
StyI CCWWGG 3 cut(s) 443, 765, 1924
TaaI ACNGT 7 cut(s) 567, 779, 865, 1340, 1686, 2347, 2487
TaiI ACGT 5 cut(s) 73, 856, 1882, 2140, 2618
TaqI TCGA 6 cut(s) 177, 359, 502, 877, 1214, 1944
TaqII GACCGA 2 cut(s) 913, 953
TatI WGTACW 3 cut(s) 1276, 1340, 2292
TauI GCSGC 7 cut(s) 13, 335, 1107, 1128, 1722, 2057, 2219
TfiI GAWTC 6 cut(s) 472, 721, 1076, 1328, 1676, 2004
Tru1I TTAA 7 cut(s) 198, 1299, 1551, 1629, 1746, 2130, 2631
Tru9I TTAA 7 cut(s) 198, 1299, 1551, 1629, 1746, 2130, 2631
TscAI CASTG 6 cut(s) 177, 344, 572, 1066, 1630, 2256
TseFI GTSAC 6 cut(s) 1568, 1702, 1760, 1882, 2281, 2374
TseI GCWGC 2 cut(s) 1766, 2420
Tsp45I GTSAC 6 cut(s) 1568, 1702, 1760, 1882, 2281, 2374
TspDTI ATGAA 6 cut(s) 17, 200, 233, 1193, 1717, 1774
TspGWI ACGGA 1 cut(s) 2102
TspRI CASTG 6 cut(s) 177, 344, 572, 1066, 1630, 2256
Tth111I GACNNNGTC 1 cut(s) 370
VneI GTGCAC 1 cut(s) 66
VpaK11BI GGWCC 5 cut(s) 113, 1195, 2014, 2110, 2432
XapI RAATTY 5 cut(s) 76, 187, 455, 661, 1156
XceI RCATGY 3 cut(s) 264, 1890, 2299
XhoI CTCGAG 2 cut(s) 501, 876
XspI CTAG 3 cut(s) 119, 1151, 1349
ZraI GACGTC 1 cut(s) 2616
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.