pycom01g04330

Cyclic nucleotide-gated ion channel 1-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Forward (+)
3252612 .. 3253991
1380 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g04330.6

Sequence Viewer

Length: 1095 bp
ATGCTGTTTACCCAAATTGAAGGTGCTCCTTGGTCGGCTGGTTCTACGGCAACAGTGTTGTTTATCCAAACTGAAGATGTTCACCGATTGCCTTCACAGTGTTGTTTATCTAAACTGAAGATGTGTCGGCGGAAAAAGAAAATAAAAATTCTCAAAGTGTTTAAGAGGTTTGAGCAGGGCGATTATGTGTTGAATTGGAGAGGGCCCGATTGTTGCATGATGCCTTGTATTTATAGCAACAAATCCTCCTTAAGATTGACTCACCCCTTTTTGAGGCCATATTCATTGCTGGTCAAGAATCCATATTGCACTAAGACCCCTTATTGTATTAGGACTTCTTCGACCTATCTGCTCATCCAAATTACTCCTTCTTGCAGCCCATATAGTACACTTGGGAAAACTTTGGGCCGAACCTACCCTTGGCCCAATAACATTTTGGGCCCAAACATTGCCCCTTCGCTTCTGAGGTCTTCGAAAGAAAAGCCTCATATGTCCCAACCGTCAAGCGCATTTATGACACACGATCGCACGATCCAAATTTTCTCACACGTCTTGCCACGTGTCAACCCCTTGGTTAACCTAACAACCTTTAATCATGACCCTCGAAAACGTGCGCCAGTCGAAACGTCTCTTCCTCATCAATGCATTAAATCCGCCACAACACGCAATCGTATTTCCAAGATATCCGAAATGATTGGTGATTTCCTGATCGATTTTTCCCTCACATTTGAAAATCAAACTCTCTTTCACTTGCATTTCACACTTCCAGAAACCTTTGAAAATCTCCTCGCCATTTTGCTTTTGAAATCCCAAAAGATAAACTTTCATCCCAGAAATCCTTCCAAGCTTTCCTCCCATAACCCTTCCAAGCTTTCCCAAATGGCTTCCAACACCTTTATTTCCAAGCTCAACGATGAATGCAGCAAATGCAAAGGCTTCATTGAACGGAGCACCATCAAAACTCTGCGGTTCGAGAGTGATCTAAGCACCACTCATCAAATCCTGGGGCCACTCTTCAAGGATGCAGTACCATCGTCCATCACCACACTTTTCAAGGCTCACTGCCTGACACCCTTATTGCAAGGGTTTGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

365

Amino Acids

41.44

Weight (kDa)

9.67

Isoelectric Point (pI)

47.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000063)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21382 FvH4_1g29794 FvH4_1g29795 FvH4_2g35573 FvH4_2g35574 FvH4_4g18552 FvH4_5g16044
malus_domestica MD05G1017000.v1.1
prunus_persica Prupe.3G140800_v2.0.a1 Prupe.6G164100_v2.0.a1
pyrus_communis pycom01g04330 pycom03g19820 pycom04g06720 pycom06g11360 pycom06g19000 pycom10g08100 pycom13g16660 pycom13g27590 pycom13g27640 pycom13g27890 pycom16g11770 pycom16g19530
rosa_chinensis RchiOBHm_Chr1g0317341 RchiOBHm_Chr1g0317351 RchiOBHm_Chr1g0320431 RchiOBHm_Chr1g0320711 RchiOBHm_Chr1g0320721 RchiOBHm_Chr1g0321611 RchiOBHm_Chr1g0321621 RchiOBHm_Chr1g0321631 RchiOBHm_Chr1g0323651 RchiOBHm_Chr1g0332991 RchiOBHm_Chr1g0333001 RchiOBHm_Chr1g0335981 RchiOBHm_Chr1g0335991 RchiOBHm_Chr1g0336001 RchiOBHm_Chr1g0350201 RchiOBHm_Chr1g0368201 RchiOBHm_Chr2g0105531 RchiOBHm_Chr2g0105541 RchiOBHm_Chr2g0116571 RchiOBHm_Chr2g0116581 RchiOBHm_Chr2g0121071 RchiOBHm_Chr2g0131351 RchiOBHm_Chr2g0131661 RchiOBHm_Chr2g0133021 RchiOBHm_Chr2g0138181 RchiOBHm_Chr2g0138191 RchiOBHm_Chr2g0142701 RchiOBHm_Chr2g0142711 RchiOBHm_Chr2g0152981 RchiOBHm_Chr3g0456181 RchiOBHm_Chr3g0456191 RchiOBHm_Chr3g0493631 RchiOBHm_Chr3g0496201 RchiOBHm_Chr4g0401541 RchiOBHm_Chr4g0410311 RchiOBHm_Chr4g0410321 RchiOBHm_Chr4g0419231 RchiOBHm_Chr4g0419511 RchiOBHm_Chr4g0419521 RchiOBHm_Chr5g0004311 RchiOBHm_Chr5g0004321 RchiOBHm_Chr5g0038131 RchiOBHm_Chr5g0038251 RchiOBHm_Chr5g0038261 RchiOBHm_Chr5g0038271 RchiOBHm_Chr5g0052241 RchiOBHm_Chr5g0053911 RchiOBHm_Chr5g0074641 RchiOBHm_Chr5g0076651 RchiOBHm_Chr5g0076661 RchiOBHm_Chr6g0249161 RchiOBHm_Chr6g0249171 RchiOBHm_Chr6g0250961 RchiOBHm_Chr6g0253701 RchiOBHm_Chr6g0262131 RchiOBHm_Chr6g0263181 RchiOBHm_Chr6g0263231 RchiOBHm_Chr6g0263241 RchiOBHm_Chr6g0263251 RchiOBHm_Chr6g0291271 RchiOBHm_Chr7g0194611 RchiOBHm_Chr7g0219691 RchiOBHm_Chr7g0219701 RchiOBHm_Chr7g0225431 RchiOBHm_Chr7g0234221 RchiOBHm_Chr7g0238711 RchiOBHm_Chr7g0238721 RchiOBHm_Chr7g0238731 RchiOBHm_Chr7g0239611 RchiOBHm_Chr7g0239621
rosa_laevigata RLG00000001361 RLG00000001376 RLG00000001860 RLG00000002051 RLG00000002362 RLG00000008940 RLG00000012764 RLG00000018782 RLG00000029639 RLG00000030151
rosa_multiflora Rmu_co8090794.1_g000001 Rmu_co8135356.1_g000001 Rmu_co8224968.1_g000001 Rmu_sc0000016.1_g000020 Rmu_sc0000029.1_g000061 Rmu_sc0000035.1_g000032 Rmu_sc0000060.1_g000041 Rmu_sc0000148.1_g000041 Rmu_sc0000315.1_g000084 Rmu_sc0000527.1_g000005 Rmu_sc0000527.1_g000007 Rmu_sc0000527.1_g000008 Rmu_sc0000648.1_g000002 Rmu_sc0000762.1_g000076 Rmu_sc0000870.1_g000003 Rmu_sc0000870.1_g000004 Rmu_sc0000948.1_g000037 Rmu_sc0000997.1_g000003 Rmu_sc0001047.1_g000041 Rmu_sc0001047.1_g000042 Rmu_sc0001075.1_g000044 Rmu_sc0001174.1_g000006 Rmu_sc0001235.1_g000025 Rmu_sc0001292.1_g000008 Rmu_sc0001301.1_g000038 Rmu_sc0001461.1_g000069 Rmu_sc0001461.1_g000070 Rmu_sc0001669.1_g000041 Rmu_sc0001689.1_g000027 Rmu_sc0001896.1_g000008 Rmu_sc0001909.1_g000013 Rmu_sc0002170.1_g000038 Rmu_sc0002200.1_g000014 Rmu_sc0002283.1_g000027 Rmu_sc0002284.1_g000014 Rmu_sc0002294.1_g000017 Rmu_sc0002294.1_g000018 Rmu_sc0002307.1_g000020 Rmu_sc0002307.1_g000021 Rmu_sc0002307.1_g000023 Rmu_sc0002357.1_g000054 Rmu_sc0002409.1_g000005 Rmu_sc0002535.1_g000002 Rmu_sc0002589.1_g000014 Rmu_sc0002759.1_g000016 Rmu_sc0002759.1_g000017 Rmu_sc0002777.1_g000015 Rmu_sc0002824.1_g000016 Rmu_sc0002872.1_g000005 Rmu_sc0002872.1_g000012 Rmu_sc0002872.1_g000013 Rmu_sc0002942.1_g000019 Rmu_sc0003337.1_g000001 Rmu_sc0003410.1_g000052 Rmu_sc0003445.1_g000010 Rmu_sc0003773.1_g000007 Rmu_sc0003773.1_g000008 Rmu_sc0003895.1_g000002 Rmu_sc0004063.1_g000006 Rmu_sc0004088.1_g000009 Rmu_sc0004088.1_g000010 Rmu_sc0004174.1_g000027 Rmu_sc0004196.1_g000010 Rmu_sc0004515.1_g000006 Rmu_sc0004727.1_g000010 Rmu_sc0004755.1_g000018 Rmu_sc0005016.1_g000030 Rmu_sc0005026.1_g000001 Rmu_sc0005044.1_g000007 Rmu_sc0005284.1_g000001 Rmu_sc0005431.1_g000030 Rmu_sc0005802.1_g000014 Rmu_sc0005802.1_g000015 Rmu_sc0005994.1_g000004 Rmu_sc0005994.1_g000005 Rmu_sc0006059.1_g000048 Rmu_sc0006583.1_g000013 Rmu_sc0006824.1_g000009 Rmu_sc0007458.1_g000005 Rmu_sc0007707.1_g000002 Rmu_sc0008242.1_g000012 Rmu_sc0008713.1_g000006 Rmu_sc0008770.1_g000008 Rmu_sc0009785.1_g000004 Rmu_sc0009785.1_g000005 Rmu_sc0010125.1_g000001 Rmu_sc0010211.1_g000004 Rmu_sc0011034.1_g000001 Rmu_sc0011833.1_g000006 Rmu_sc0014851.1_g000001 Rmu_sc0014899.1_g000001 Rmu_sc0015060.1_g000003 Rmu_sc0015186.1_g000001 Rmu_sc0015248.1_g000003 Rmu_sc0015248.1_g000004 Rmu_sc0015314.1_g000001 Rmu_sc0018098.1_g000002 Rmu_sc0022706.1_g000004 Rmu_sc0023350.1_g000002 Rmu_sc0027636.1_g000001 Rmu_sc0027672.1_g000003 Rmu_sc0030879.1_g000001 Rmu_ssc0000008.1_g000029 Rmu_ssc0000019.1_g000014 Rmu_ssc0000050.1_g000082 Rmu_ssc0000282.1_g000004 Rmu_ssc0000311.1_g000010
rosa_roxburghii Rroxscaffold_1G00015190 Rroxscaffold_1G00031880 Rroxscaffold_1G00031890 Rroxscaffold_1G00059310 Rroxscaffold_1G00060420 Rroxscaffold_1G00067930 Rroxscaffold_1G00075030 Rroxscaffold_2G00082210 Rroxscaffold_2G00122970 Rroxscaffold_3G00218230 Rroxscaffold_3G00219020 Rroxscaffold_3G00219030 Rroxscaffold_3G00223680 Rroxscaffold_3G00223690 Rroxscaffold_3G00223700 Rroxscaffold_3G00226870 Rroxscaffold_3G00226880 Rroxscaffold_3G00232990 Rroxscaffold_3G00265610 Rroxscaffold_3G00265620 Rroxscaffold_3G00265630 Rroxscaffold_4G00318660 Rroxscaffold_4G00319060 Rroxscaffold_4G00323500 Rroxscaffold_5G00357520 Rroxscaffold_5G00366150 Rroxscaffold_5G00377470 Rroxscaffold_6G00395700 Rroxscaffold_6G00413950 Rroxscaffold_7G00187650 Rroxscaffold_7G00198290 Rroxscaffold_7G00198300 Rroxscaffold_7G00208060
rosa_rugosa Rorug01G0173900 Rorug01G0174000 Rorug01G0174100 Rorug01G0174100 Rorug02G0341200 Rorug04G0135700 Rorug04G0135800 Rorug05G0032500 Rorug06G0021800
rosa_samantha Rh1AG036600 Rh1AG245800 Rh1CG021700 Rh1CG021800 Rh1CG085800 Rh1CG085900 Rh1CG187900 Rh1CG229600 Rh1CG239600 Rh1CG246500 Rh1CG246600 Rh2BG478100 Rh2DG341300 Rh2DG366600 Rh2DG375700 Rh2DG384300 Rh2DG487000 Rh2DG504000 Rh2DG504100 Rh3AG311800 Rh3AG327500 Rh3AG328300 Rh3BG345100 Rh3CG320100 Rh4AG005700 Rh4AG067900 Rh4AG068000 Rh4AG084400 Rh4AG106700 Rh4AG160000 Rh4AG173900 Rh4AG174000 Rh4CG125300 Rh4CG125500 Rh4CG264500 Rh4DG110800 Rh5AG047300 Rh5AG085200 Rh5AG126300 Rh5AG127300 Rh5AG203000 Rh5AG332400 Rh5AG332500 Rh5AG342400 Rh5AG344100 Rh5AG375600 Rh5AG378300 Rh5AG386000 Rh5AG529600 Rh5BG125200 Rh5CG137600 Rh5CG137700 Rh5DG125200 Rh6BG134100 Rh6BG175400 Rh6BG179500 Rh6BG179600 Rh6BG181600 Rh6BG181700 Rh6BG191100 Rh6BG232900 Rh6BG259700 Rh6BG259800 Rh7AG028000 Rh7AG319400 Rh7AG352700 Rh7AG352800 Rh7AG352900 Rh7AG482500 Rh7AG482600 Rh7AG503800 Rh7BG334700 Rh7CG200100 Rh7CG336200 Rh7CG370200 Rh7CG370400 Rh7CG370500
rosa_wichuraiana Rw1G001580 Rw1G003570 Rw1G004260 Rw1G004270 Rw1G021170 Rw2G019390 Rw2G040280 Rw2G044050 Rw4G004430 Rw5G010950 Rw5G018350 Rw5G032890 Rw6G002840 Rw6G006510 Rw6G007780 Rw6G033790 Rw7G036320 Rw7G040550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 130, 654, 967
AclWI GGATC 1 cut(s) 526
AcsI RAATTY 2 cut(s) 147, 537
AcuI CTGAAG 2 cut(s) 93, 137
AcvI CACGTG 1 cut(s) 560
AfaI GTAC 2 cut(s) 388, 1029
AfiI CCNNNNNNNGG 2 cut(s) 273, 420
AflII CTTAAG 1 cut(s) 250
AflIII ACRYGT 2 cut(s) 547, 559
AgsI TTSAA 8 cut(s) 20, 193, 731, 779, 805, 944, 1018, 1054
AjiI CACGTC 1 cut(s) 550
AjnI CCWGG 1 cut(s) 1002
AjuI GAANNNNNNNTTGG 2 cut(s) 403, 435
AluBI AGCT 3 cut(s) 847, 871, 907
AluI AGCT 3 cut(s) 847, 871, 907
Alw21I GWGCWC 2 cut(s) 28, 953
Alw26I GTCTC 1 cut(s) 633
AlwI GGATC 1 cut(s) 526
AoxI GGCC 6 cut(s) 203, 275, 406, 422, 439, 1007
ApaI GGGCCC 2 cut(s) 207, 443
ApeKI GCWGC 2 cut(s) 375, 921
ApoI RAATTY 2 cut(s) 147, 537
Asp700I GAANNNNTTC 2 cut(s) 78, 838
AspLEI GCGC 2 cut(s) 509, 616
AspS9I GGNCC 7 cut(s) 203, 204, 406, 423, 439, 440, 1007
AsuHPI GGTGA 4 cut(s) 74, 254, 710, 1033
AsuII TTCGAA 1 cut(s) 473
BaeGI GKGCMC 2 cut(s) 207, 443
BanII GRGCYC 2 cut(s) 207, 443
BarI GAAGNNNNNNTAC 2 cut(s) 319, 351
BbrPI CACGTG 1 cut(s) 560
BbsI GAAGAC 1 cut(s) 462
Bbv12I GWGCWC 2 cut(s) 28, 953
BbvI GCAGC 2 cut(s) 387, 933
BccI CCATC 3 cut(s) 962, 1039, 1046
BceAI ACGGC 1 cut(s) 63
BcgI CGANNNNNNTGC 4 cut(s) 331, 365, 1014, 1048
BciT130I CCWGG 1 cut(s) 1004
BcoDI GTCTC 1 cut(s) 633
BfaI CTAG 1 cut(s) 1093
BfrI CTTAAG 1 cut(s) 250
BisI GCNGC 2 cut(s) 376, 922
BlsI GCNGC 2 cut(s) 377, 923
Bme1390I CCNGG 1 cut(s) 1004
BmgBI CACGTC 1 cut(s) 550
BmgT120I GGNCC 7 cut(s) 203, 204, 406, 423, 439, 440, 1007
BmiI GGNNCC 3 cut(s) 205, 441, 1008
BmrFI CCNGG 1 cut(s) 1004
BmsI GCATC 2 cut(s) 210, 1012
BpiI GAAGAC 1 cut(s) 462
Bpu14I TTCGAA 1 cut(s) 473
Bsa29I ATCGAT 1 cut(s) 711
BsaAI YACGTR 1 cut(s) 560
BsaJI CCNNGG 4 cut(s) 29, 419, 570, 1003
BsaXI ACNNNNNCTCC 2 cut(s) 230, 260
Bsc4I CCNNNNNNNGG 2 cut(s) 273, 420
Bse1I ACTGG 1 cut(s) 617
Bse3DI GCAATG 2 cut(s) 284, 447
BseBI CCWGG 1 cut(s) 1004
BseCI ATCGAT 1 cut(s) 711
BseDI CCNNGG 4 cut(s) 29, 419, 570, 1003
BseGI GGATG 3 cut(s) 354, 826, 1027
BseLI CCNNNNNNNGG 2 cut(s) 273, 420
BseMI GCAATG 2 cut(s) 284, 447
BseMII CTCAG 1 cut(s) 455
BseNI ACTGG 1 cut(s) 617
BseRI GAGGAG 1 cut(s) 776
BseSI GKGCMC 2 cut(s) 207, 443
BseXI GCAGC 2 cut(s) 387, 933
Bsh1285I CGRYCG 1 cut(s) 526
BshFI GGCC 6 cut(s) 205, 277, 408, 424, 441, 1009
BshVI ATCGAT 1 cut(s) 711
BsiEI CGRYCG 1 cut(s) 526
BsiHKAI GWGCWC 2 cut(s) 28, 953
BslFI GGGAC 1 cut(s) 478
BslI CCNNNNNNNGG 2 cut(s) 273, 420
BsmAI GTCTC 1 cut(s) 633
BsmBI CGTCTC 1 cut(s) 633
BsmFI GGGAC 1 cut(s) 478
BsmI GAATGC 1 cut(s) 923
BsnI GGCC 6 cut(s) 205, 277, 408, 424, 441, 1009
Bsp119I TTCGAA 1 cut(s) 473
Bsp120I GGGCCC 2 cut(s) 203, 439
Bsp1286I GDGCHC 4 cut(s) 28, 207, 443, 953
Bsp143I GATC 4 cut(s) 523, 531, 708, 979
BspACI CCGC 3 cut(s) 130, 654, 967
BspANI GGCC 6 cut(s) 205, 277, 408, 424, 441, 1009
BspCNI CTCAG 1 cut(s) 456
BspDI ATCGAT 1 cut(s) 711
BspHI TCATGA 1 cut(s) 595
BspLI GGNNCC 3 cut(s) 205, 441, 1008
BspPI GGATC 1 cut(s) 526
BspT104I TTCGAA 1 cut(s) 473
BspTI CTTAAG 1 cut(s) 250
BsrDI GCAATG 2 cut(s) 284, 447
BsrI ACTGG 1 cut(s) 617
BssECI CCNNGG 4 cut(s) 29, 419, 570, 1003
BssMI GATC 4 cut(s) 523, 531, 708, 979
BssT1I CCWWGG 3 cut(s) 29, 419, 570
Bst2UI CCWGG 1 cut(s) 1004
Bst4CI ACNGT 3 cut(s) 55, 99, 501
Bst6I CTCTTC 2 cut(s) 636, 1019
BstAFI CTTAAG 1 cut(s) 250
BstAPI GCANNNNNTGC 1 cut(s) 927
BstBAI YACGTR 1 cut(s) 560
BstBI TTCGAA 1 cut(s) 473
BstDEI CTNAG 3 cut(s) 312, 464, 983
BstENI CCTNNNNNAGG 1 cut(s) 271
BstF5I GGATG 3 cut(s) 354, 826, 1027
BstHHI GCGC 2 cut(s) 509, 616
BstKTI GATC 4 cut(s) 526, 534, 711, 982
BstMAI GTCTC 1 cut(s) 633
BstMBI GATC 4 cut(s) 523, 531, 708, 979
BstMCI CGRYCG 1 cut(s) 526
BstMWI GCNNNNNNNGC 1 cut(s) 927
BstNI CCWGG 1 cut(s) 1004
BstSCI CCNGG 1 cut(s) 1002
BstSLI GKGCMC 2 cut(s) 207, 443
BstV1I GCAGC 2 cut(s) 387, 933
BstV2I GAAGAC 1 cut(s) 462
Bsu15I ATCGAT 1 cut(s) 711
BsuRI GGCC 6 cut(s) 205, 277, 408, 424, 441, 1009
BsuTUI ATCGAT 1 cut(s) 711
BtrI CACGTC 1 cut(s) 550
BtsCI GGATG 3 cut(s) 354, 826, 1027
BtsI GCAGTG 1 cut(s) 1060
BtsIMutI CAGTG 3 cut(s) 60, 104, 1060
CciI TCATGA 1 cut(s) 595
CfoI GCGC 2 cut(s) 509, 616
Cfr13I GGNCC 7 cut(s) 203, 204, 406, 423, 439, 440, 1007
ClaI ATCGAT 1 cut(s) 711
Csp6I GTAC 2 cut(s) 387, 1028
CviAII CATG 2 cut(s) 217, 596
CviQI GTAC 2 cut(s) 387, 1028
DdeI CTNAG 3 cut(s) 312, 464, 983
DpnI GATC 4 cut(s) 525, 533, 710, 981
DpnII GATC 4 cut(s) 523, 531, 708, 979
Eam1104I CTCTTC 2 cut(s) 636, 1019
EarI CTCTTC 2 cut(s) 636, 1019
EciI GGCGGA 2 cut(s) 145, 643
Eco130I CCWWGG 3 cut(s) 29, 419, 570
Eco24I GRGCYC 2 cut(s) 207, 443
Eco32I GATATC 1 cut(s) 684
Eco57I CTGAAG 2 cut(s) 93, 137
Eco72I CACGTG 1 cut(s) 560
EcoNI CCTNNNNNAGG 1 cut(s) 271
EcoO109I RGGNCCY 1 cut(s) 203
EcoRII CCWGG 1 cut(s) 1002
EcoRV GATATC 1 cut(s) 684
EcoT14I CCWWGG 3 cut(s) 29, 419, 570
EcoT22I ATGCAT 1 cut(s) 647
EcoT38I GRGCYC 2 cut(s) 207, 443
ErhI CCWWGG 3 cut(s) 29, 419, 570
Esp3I CGTCTC 1 cut(s) 633
FaeI CATG 2 cut(s) 220, 599
FalI AAGNNNNNCTT 2 cut(s) 806, 838
FaqI GGGAC 1 cut(s) 478
FatI CATG 2 cut(s) 216, 595
FauNDI CATATG 1 cut(s) 489
Fnu4HI GCNGC 2 cut(s) 376, 922
FokI GGATG 3 cut(s) 341, 813, 1034
FriOI GRGCYC 2 cut(s) 207, 443
Fsp4HI GCNGC 2 cut(s) 376, 922
FspBI CTAG 1 cut(s) 1093
GlaI GCGC 2 cut(s) 508, 615
GluI GCNGC 2 cut(s) 376, 922
HaeIII GGCC 6 cut(s) 205, 277, 408, 424, 441, 1009
HhaI GCGC 2 cut(s) 509, 616
Hin1II CATG 2 cut(s) 220, 599
Hin6I GCGC 2 cut(s) 507, 614
HinP1I GCGC 2 cut(s) 507, 614
HincII GTYRAC 2 cut(s) 565, 577
HindII GTYRAC 2 cut(s) 565, 577
HindIII AAGCTT 2 cut(s) 845, 869
HinfI GANTC 2 cut(s) 259, 298
HpaI GTTAAC 1 cut(s) 577
HphI GGTGA 4 cut(s) 74, 254, 710, 1033
Hpy166II GTNNAC 5 cut(s) 9, 82, 389, 565, 577
Hpy188I TCNGA 2 cut(s) 465, 688
Hpy188III TCNNGA 5 cut(s) 295, 596, 706, 767, 973
Hpy8I GTNNAC 5 cut(s) 9, 82, 389, 565, 577
HpyAV CCTTC 6 cut(s) 14, 102, 378, 465, 849, 873
HpyCH4III ACNGT 3 cut(s) 55, 99, 501
HpyCH4IV ACGT 4 cut(s) 549, 559, 610, 626
HpyCH4V TGCA 9 cut(s) 216, 309, 375, 645, 754, 921, 930, 1025, 1081
HpyF10VI GCNNNNNNNGC 1 cut(s) 927
HpyF3I CTNAG 3 cut(s) 312, 464, 983
HpySE526I ACGT 4 cut(s) 549, 559, 610, 626
Hsp92II CATG 2 cut(s) 220, 599
HspAI GCGC 2 cut(s) 507, 614
KspAI GTTAAC 1 cut(s) 577
Kzo9I GATC 4 cut(s) 523, 531, 708, 979
LmnI GCTCC 2 cut(s) 31, 948
Lsp1109I GCAGC 2 cut(s) 387, 933
LweI GCATC 2 cut(s) 210, 1012
MaeI CTAG 1 cut(s) 1093
MaeII ACGT 4 cut(s) 549, 559, 610, 626
MalI GATC 4 cut(s) 525, 533, 710, 981
MboI GATC 4 cut(s) 523, 531, 708, 979
MboII GAAGA 6 cut(s) 86, 130, 330, 462, 623, 1006
MhlI GDGCHC 4 cut(s) 28, 207, 443, 953
MluCI AATT 5 cut(s) 15, 147, 193, 360, 537
MlyI GAGTC 1 cut(s) 253
MmeI TCCRAC 1 cut(s) 912
Mph1103I ATGCAT 1 cut(s) 647
MroXI GAANNNNTTC 2 cut(s) 78, 838
MseI TTAA 5 cut(s) 162, 251, 576, 591, 648
MspCI CTTAAG 1 cut(s) 250
MspR9I CCNGG 1 cut(s) 1004
Mva1269I GAATGC 1 cut(s) 923
MvaI CCWGG 1 cut(s) 1004
MwoI GCNNNNNNNGC 1 cut(s) 927
NdeI CATATG 1 cut(s) 489
NdeII GATC 4 cut(s) 523, 531, 708, 979
NlaIII CATG 2 cut(s) 220, 599
NlaIV GGNNCC 3 cut(s) 205, 441, 1008
NsiI ATGCAT 1 cut(s) 647
NspV TTCGAA 1 cut(s) 473
PagI TCATGA 1 cut(s) 595
PctI GAATGC 1 cut(s) 923
PdmI GAANNNNTTC 2 cut(s) 78, 838
PfeI GAWTC 1 cut(s) 298
PkrI GCNGC 2 cut(s) 377, 923
Ple19I CGATCG 1 cut(s) 526
PleI GAGTC 1 cut(s) 253
PmaCI CACGTG 1 cut(s) 560
PmlI CACGTG 1 cut(s) 560
PpsI GAGTC 1 cut(s) 253
Ppu21I YACGTR 1 cut(s) 560
Psp6I CCWGG 1 cut(s) 1002
PspCI CACGTG 1 cut(s) 560
PspGI CCWGG 1 cut(s) 1002
PspN4I GGNNCC 3 cut(s) 205, 441, 1008
PspOMI GGGCCC 2 cut(s) 203, 439
PspPI GGNCC 7 cut(s) 203, 204, 406, 423, 439, 440, 1007
PvuI CGATCG 1 cut(s) 526
RsaI GTAC 2 cut(s) 388, 1029
RsaNI GTAC 2 cut(s) 387, 1028
SaqAI TTAA 5 cut(s) 162, 251, 576, 591, 648
SatI GCNGC 2 cut(s) 376, 922
Sau3AI GATC 4 cut(s) 523, 531, 708, 979
Sau96I GGNCC 7 cut(s) 203, 204, 406, 423, 439, 440, 1007
SchI GAGTC 1 cut(s) 253
ScrFI CCNGG 1 cut(s) 1004
SduI GDGCHC 4 cut(s) 28, 207, 443, 953
SfaNI GCATC 2 cut(s) 210, 1012
SfuI TTCGAA 1 cut(s) 473
SmlI CTYRAG 1 cut(s) 250
SmoI CTYRAG 1 cut(s) 250
Sse9I AATT 5 cut(s) 15, 147, 193, 360, 537
SsiI CCGC 3 cut(s) 130, 654, 967
SspMI CTAG 1 cut(s) 1093
StyD4I CCNGG 1 cut(s) 1002
StyI CCWWGG 3 cut(s) 29, 419, 570
TaaI ACNGT 3 cut(s) 55, 99, 501
TaiI ACGT 4 cut(s) 552, 562, 613, 629
TaqI TCGA 6 cut(s) 341, 473, 604, 621, 711, 972
TasI AATT 5 cut(s) 15, 147, 193, 360, 537
TatI WGTACW 1 cut(s) 386
TfiI GAWTC 1 cut(s) 298
Tru1I TTAA 5 cut(s) 162, 251, 576, 591, 648
Tru9I TTAA 5 cut(s) 162, 251, 576, 591, 648
TscAI CASTG 3 cut(s) 60, 104, 1067
TseI GCWGC 2 cut(s) 375, 921
TspDTI ATGAA 4 cut(s) 273, 815, 928, 930
TspGWI ACGGA 1 cut(s) 961
TspRI CASTG 3 cut(s) 60, 104, 1067
Vha464I CTTAAG 1 cut(s) 250
XagI CCTNNNNNAGG 1 cut(s) 271
XapI RAATTY 2 cut(s) 147, 537
XcmI CCANNNNNNNNNTGG 1 cut(s) 433
XmnI GAANNNNTTC 2 cut(s) 78, 838
XspI CTAG 1 cut(s) 1093
Zsp2I ATGCAT 1 cut(s) 647
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.