Rmu_ssc0000008.1_g000029

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000008.1
OG0000063
Physical Location & Seq
Forward (+)
93810 .. 95495
1686 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000008.1_g000029.1.cds

Sequence Viewer

Length: 1248 bp
atgaagataagagtagcaactagcaagagttcctcccagttcagagagtggtgggcgaaacgagtaggtagccgcgttaaagatgggttggtgtcggctaggcgatcggcttttgcaggaaatccatgggcacaagagaagccgaaagatgtaaggcgtggtaaaataacaagcaaagttgctaaagcaatcctaactataagtggccaagagtctttgaagaagtgtgctaaaggtagcacaaagagaaaggccatccatagtgcagccactgaggcggccaaagatggtgccaccaagtcttcaacgtctcaatctcctccaatgaaacaatcggcaaaacaagacgagcaatcctctgagagtgaagaacaattgtgcgtggccaaacaaagtcgcctagagacattcaagaaggccaacatccaaaatgccattcctagtgaaacagaggaatccgtggaactaaccattgataaagatggccaaccaagtaatgacgaacctatgggggagataatttctcctgaaagaatggccgaaagcgaagttgtggcaatgaatatggaggagacacttttgctcacccaaacttcaacgcaagccagtattccctcctcgtcgcttagtgagcaacacctagtgttggctaacgaactagccatttcgcagttaccgaccgctcaattgacatcaagggaggaagttgatggggctctgaaggtggtaaaggaaacgttagcgcagccattaaaagaatttgtggaaacaggccaactatcaaaagtgaaagtggccatggatttgttacttggagccaaatactttgcccctcccaaggcagccctcattggtgagaagctagaagtgttgacccaacaaatatcccatgtagctggttcgtaccaagaaatagaaaaaaggagacaacaaatcttggcttgtgagcaaatgaagaaagccttggttcccgagtttgggtggtgtatggaccaaaaacgggttgtggagtctcttgaaggcaagataaatgagttggaaagacaattggcgtccttgaaacaagagagacaagaagtgggggaaaagctccttcaaaggagtaagcagtgtttccaaagccaagggcaactgaaaaagatagaggccgaattgaaaaattccgagcctaggtgtatgcaacttgagagtgaccttcaggacactggttgtaccttggaagctcttaaagctttattagctgagtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

415

Amino Acids

45.84

Weight (kDa)

8.31

Isoelectric Point (pI)

59.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000063)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21382 FvH4_1g29794 FvH4_1g29795 FvH4_2g35573 FvH4_2g35574 FvH4_4g18552 FvH4_5g16044
malus_domestica MD05G1017000.v1.1
prunus_persica Prupe.3G140800_v2.0.a1 Prupe.6G164100_v2.0.a1
pyrus_communis pycom01g04330 pycom03g19820 pycom04g06720 pycom06g11360 pycom06g19000 pycom10g08100 pycom13g16660 pycom13g27590 pycom13g27640 pycom13g27890 pycom16g11770 pycom16g19530
rosa_chinensis RchiOBHm_Chr1g0317341 RchiOBHm_Chr1g0317351 RchiOBHm_Chr1g0320431 RchiOBHm_Chr1g0320711 RchiOBHm_Chr1g0320721 RchiOBHm_Chr1g0321611 RchiOBHm_Chr1g0321621 RchiOBHm_Chr1g0321631 RchiOBHm_Chr1g0323651 RchiOBHm_Chr1g0332991 RchiOBHm_Chr1g0333001 RchiOBHm_Chr1g0335981 RchiOBHm_Chr1g0335991 RchiOBHm_Chr1g0336001 RchiOBHm_Chr1g0350201 RchiOBHm_Chr1g0368201 RchiOBHm_Chr2g0105531 RchiOBHm_Chr2g0105541 RchiOBHm_Chr2g0116571 RchiOBHm_Chr2g0116581 RchiOBHm_Chr2g0121071 RchiOBHm_Chr2g0131351 RchiOBHm_Chr2g0131661 RchiOBHm_Chr2g0133021 RchiOBHm_Chr2g0138181 RchiOBHm_Chr2g0138191 RchiOBHm_Chr2g0142701 RchiOBHm_Chr2g0142711 RchiOBHm_Chr2g0152981 RchiOBHm_Chr3g0456181 RchiOBHm_Chr3g0456191 RchiOBHm_Chr3g0493631 RchiOBHm_Chr3g0496201 RchiOBHm_Chr4g0401541 RchiOBHm_Chr4g0410311 RchiOBHm_Chr4g0410321 RchiOBHm_Chr4g0419231 RchiOBHm_Chr4g0419511 RchiOBHm_Chr4g0419521 RchiOBHm_Chr5g0004311 RchiOBHm_Chr5g0004321 RchiOBHm_Chr5g0038131 RchiOBHm_Chr5g0038251 RchiOBHm_Chr5g0038261 RchiOBHm_Chr5g0038271 RchiOBHm_Chr5g0052241 RchiOBHm_Chr5g0053911 RchiOBHm_Chr5g0074641 RchiOBHm_Chr5g0076651 RchiOBHm_Chr5g0076661 RchiOBHm_Chr6g0249161 RchiOBHm_Chr6g0249171 RchiOBHm_Chr6g0250961 RchiOBHm_Chr6g0253701 RchiOBHm_Chr6g0262131 RchiOBHm_Chr6g0263181 RchiOBHm_Chr6g0263231 RchiOBHm_Chr6g0263241 RchiOBHm_Chr6g0263251 RchiOBHm_Chr6g0291271 RchiOBHm_Chr7g0194611 RchiOBHm_Chr7g0219691 RchiOBHm_Chr7g0219701 RchiOBHm_Chr7g0225431 RchiOBHm_Chr7g0234221 RchiOBHm_Chr7g0238711 RchiOBHm_Chr7g0238721 RchiOBHm_Chr7g0238731 RchiOBHm_Chr7g0239611 RchiOBHm_Chr7g0239621
rosa_laevigata RLG00000001361 RLG00000001376 RLG00000001860 RLG00000002051 RLG00000002362 RLG00000008940 RLG00000012764 RLG00000018782 RLG00000029639 RLG00000030151
rosa_multiflora Rmu_co8090794.1_g000001 Rmu_co8135356.1_g000001 Rmu_co8224968.1_g000001 Rmu_sc0000016.1_g000020 Rmu_sc0000029.1_g000061 Rmu_sc0000035.1_g000032 Rmu_sc0000060.1_g000041 Rmu_sc0000148.1_g000041 Rmu_sc0000315.1_g000084 Rmu_sc0000527.1_g000005 Rmu_sc0000527.1_g000007 Rmu_sc0000527.1_g000008 Rmu_sc0000648.1_g000002 Rmu_sc0000762.1_g000076 Rmu_sc0000870.1_g000003 Rmu_sc0000870.1_g000004 Rmu_sc0000948.1_g000037 Rmu_sc0000997.1_g000003 Rmu_sc0001047.1_g000041 Rmu_sc0001047.1_g000042 Rmu_sc0001075.1_g000044 Rmu_sc0001174.1_g000006 Rmu_sc0001235.1_g000025 Rmu_sc0001292.1_g000008 Rmu_sc0001301.1_g000038 Rmu_sc0001461.1_g000069 Rmu_sc0001461.1_g000070 Rmu_sc0001669.1_g000041 Rmu_sc0001689.1_g000027 Rmu_sc0001896.1_g000008 Rmu_sc0001909.1_g000013 Rmu_sc0002170.1_g000038 Rmu_sc0002200.1_g000014 Rmu_sc0002283.1_g000027 Rmu_sc0002284.1_g000014 Rmu_sc0002294.1_g000017 Rmu_sc0002294.1_g000018 Rmu_sc0002307.1_g000020 Rmu_sc0002307.1_g000021 Rmu_sc0002307.1_g000023 Rmu_sc0002357.1_g000054 Rmu_sc0002409.1_g000005 Rmu_sc0002535.1_g000002 Rmu_sc0002589.1_g000014 Rmu_sc0002759.1_g000016 Rmu_sc0002759.1_g000017 Rmu_sc0002777.1_g000015 Rmu_sc0002824.1_g000016 Rmu_sc0002872.1_g000005 Rmu_sc0002872.1_g000012 Rmu_sc0002872.1_g000013 Rmu_sc0002942.1_g000019 Rmu_sc0003337.1_g000001 Rmu_sc0003410.1_g000052 Rmu_sc0003445.1_g000010 Rmu_sc0003773.1_g000007 Rmu_sc0003773.1_g000008 Rmu_sc0003895.1_g000002 Rmu_sc0004063.1_g000006 Rmu_sc0004088.1_g000009 Rmu_sc0004088.1_g000010 Rmu_sc0004174.1_g000027 Rmu_sc0004196.1_g000010 Rmu_sc0004515.1_g000006 Rmu_sc0004727.1_g000010 Rmu_sc0004755.1_g000018 Rmu_sc0005016.1_g000030 Rmu_sc0005026.1_g000001 Rmu_sc0005044.1_g000007 Rmu_sc0005284.1_g000001 Rmu_sc0005431.1_g000030 Rmu_sc0005802.1_g000014 Rmu_sc0005802.1_g000015 Rmu_sc0005994.1_g000004 Rmu_sc0005994.1_g000005 Rmu_sc0006059.1_g000048 Rmu_sc0006583.1_g000013 Rmu_sc0006824.1_g000009 Rmu_sc0007458.1_g000005 Rmu_sc0007707.1_g000002 Rmu_sc0008242.1_g000012 Rmu_sc0008713.1_g000006 Rmu_sc0008770.1_g000008 Rmu_sc0009785.1_g000004 Rmu_sc0009785.1_g000005 Rmu_sc0010125.1_g000001 Rmu_sc0010211.1_g000004 Rmu_sc0011034.1_g000001 Rmu_sc0011833.1_g000006 Rmu_sc0014851.1_g000001 Rmu_sc0014899.1_g000001 Rmu_sc0015060.1_g000003 Rmu_sc0015186.1_g000001 Rmu_sc0015248.1_g000003 Rmu_sc0015248.1_g000004 Rmu_sc0015314.1_g000001 Rmu_sc0018098.1_g000002 Rmu_sc0022706.1_g000004 Rmu_sc0023350.1_g000002 Rmu_sc0027636.1_g000001 Rmu_sc0027672.1_g000003 Rmu_sc0030879.1_g000001 Rmu_ssc0000008.1_g000029 Rmu_ssc0000019.1_g000014 Rmu_ssc0000050.1_g000082 Rmu_ssc0000282.1_g000004 Rmu_ssc0000311.1_g000010
rosa_roxburghii Rroxscaffold_1G00015190 Rroxscaffold_1G00031880 Rroxscaffold_1G00031890 Rroxscaffold_1G00059310 Rroxscaffold_1G00060420 Rroxscaffold_1G00067930 Rroxscaffold_1G00075030 Rroxscaffold_2G00082210 Rroxscaffold_2G00122970 Rroxscaffold_3G00218230 Rroxscaffold_3G00219020 Rroxscaffold_3G00219030 Rroxscaffold_3G00223680 Rroxscaffold_3G00223690 Rroxscaffold_3G00223700 Rroxscaffold_3G00226870 Rroxscaffold_3G00226880 Rroxscaffold_3G00232990 Rroxscaffold_3G00265610 Rroxscaffold_3G00265620 Rroxscaffold_3G00265630 Rroxscaffold_4G00318660 Rroxscaffold_4G00319060 Rroxscaffold_4G00323500 Rroxscaffold_5G00357520 Rroxscaffold_5G00366150 Rroxscaffold_5G00377470 Rroxscaffold_6G00395700 Rroxscaffold_6G00413950 Rroxscaffold_7G00187650 Rroxscaffold_7G00198290 Rroxscaffold_7G00198300 Rroxscaffold_7G00208060
rosa_rugosa Rorug01G0173900 Rorug01G0174000 Rorug01G0174100 Rorug01G0174100 Rorug02G0341200 Rorug04G0135700 Rorug04G0135800 Rorug05G0032500 Rorug06G0021800
rosa_samantha Rh1AG036600 Rh1AG245800 Rh1CG021700 Rh1CG021800 Rh1CG085800 Rh1CG085900 Rh1CG187900 Rh1CG229600 Rh1CG239600 Rh1CG246500 Rh1CG246600 Rh2BG478100 Rh2DG341300 Rh2DG366600 Rh2DG375700 Rh2DG384300 Rh2DG487000 Rh2DG504000 Rh2DG504100 Rh3AG311800 Rh3AG327500 Rh3AG328300 Rh3BG345100 Rh3CG320100 Rh4AG005700 Rh4AG067900 Rh4AG068000 Rh4AG084400 Rh4AG106700 Rh4AG160000 Rh4AG173900 Rh4AG174000 Rh4CG125300 Rh4CG125500 Rh4CG264500 Rh4DG110800 Rh5AG047300 Rh5AG085200 Rh5AG126300 Rh5AG127300 Rh5AG203000 Rh5AG332400 Rh5AG332500 Rh5AG342400 Rh5AG344100 Rh5AG375600 Rh5AG378300 Rh5AG386000 Rh5AG529600 Rh5BG125200 Rh5CG137600 Rh5CG137700 Rh5DG125200 Rh6BG134100 Rh6BG175400 Rh6BG179500 Rh6BG179600 Rh6BG181600 Rh6BG181700 Rh6BG191100 Rh6BG232900 Rh6BG259700 Rh6BG259800 Rh7AG028000 Rh7AG319400 Rh7AG352700 Rh7AG352800 Rh7AG352900 Rh7AG482500 Rh7AG482600 Rh7AG503800 Rh7BG334700 Rh7CG200100 Rh7CG336200 Rh7CG370200 Rh7CG370400 Rh7CG370500
rosa_wichuraiana Rw1G001580 Rw1G003570 Rw1G004260 Rw1G004270 Rw1G021170 Rw2G019390 Rw2G040280 Rw2G044050 Rw4G004430 Rw5G010950 Rw5G018350 Rw5G032890 Rw6G002840 Rw6G006510 Rw6G007780 Rw6G033790 Rw7G036320 Rw7G040550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 290
AccBSI CCGCTC 1 cut(s) 683
AccII CGCG 1 cut(s) 75
AciI CCGC 3 cut(s) 73, 278, 681
AclI AACGTT 1 cut(s) 737
AcoI YGGCCR 6 cut(s) 205, 279, 384, 484, 537, 795
AcsI RAATTY 2 cut(s) 758, 1159
AcuI CTGAAG 2 cut(s) 740, 1181
AcyI GRCGYC 1 cut(s) 1052
AdeI CACNNNGTG 1 cut(s) 643
AfaI GTAC 2 cut(s) 905, 1213
AfiI CCNNNNNNNGG 6 cut(s) 646, 838, 977, 978, 1000, 1170
AgsI TTSAA 8 cut(s) 220, 306, 412, 597, 1019, 1060, 1097, 1156
AjuI GAANNNNNNNTTGG 4 cut(s) 420, 452, 947, 979
AluBI AGCT 6 cut(s) 862, 896, 1090, 1223, 1232, 1241
AluI AGCT 6 cut(s) 862, 896, 1090, 1223, 1232, 1241
Alw26I GTCTC 6 cut(s) 315, 398, 566, 919, 1017, 1063
AlwNI CAGNNNCTG 1 cut(s) 272
Ama87I CYCGRG 1 cut(s) 971
ApeKI GCWGC 3 cut(s) 266, 745, 842
ApoI RAATTY 2 cut(s) 758, 1159
AspA2I CCTAGG 1 cut(s) 1169
AspLEI GCGC 1 cut(s) 745
AspS9I GGNCC 1 cut(s) 991
AsuHPI GGTGA 2 cut(s) 577, 866
AvaI CYCGRG 1 cut(s) 971
AvaII GGWCC 1 cut(s) 991
AvrII CCTAGG 1 cut(s) 1169
BaeGI GKGCMC 1 cut(s) 133
BalI TGGCCA 4 cut(s) 207, 386, 486, 797
BanI GGYRCC 1 cut(s) 290
BanII GRGCYC 1 cut(s) 718
BbsI GAAGAC 1 cut(s) 294
BbvI GCAGC 3 cut(s) 278, 757, 854
BccI CCATC 5 cut(s) 77, 263, 281, 476, 704
BcoDI GTCTC 6 cut(s) 315, 398, 566, 919, 1017, 1063
BfaI CTAG 8 cut(s) 21, 99, 401, 441, 641, 659, 863, 1170
BglI GCCNNNNNGGC 1 cut(s) 275
BisI GCNGC 5 cut(s) 73, 267, 279, 746, 843
BlnI CCTAGG 1 cut(s) 1169
BlsI GCNGC 5 cut(s) 74, 268, 280, 747, 844
Bme18I GGWCC 1 cut(s) 991
BmeT110I CYCGRG 1 cut(s) 971
BmgT120I GGNCC 1 cut(s) 991
BmiI GGNNCC 3 cut(s) 292, 817, 969
BmrI ACTGGG 1 cut(s) 31
BmuI ACTGGG 1 cut(s) 31
BpiI GAAGAC 1 cut(s) 294
BplI GAGNNNNNCTC 2 cut(s) 341, 373
BpuEI CTTGAG 1 cut(s) 1205
BsaHI GRCGYC 1 cut(s) 1052
BsaJI CCNNGG 8 cut(s) 125, 459, 798, 837, 963, 1123, 1169, 1215
Bsc4I CCNNNNNNNGG 6 cut(s) 646, 838, 977, 978, 1000, 1170
Bse1I ACTGG 3 cut(s) 37, 606, 1210
Bse3DI GCAATG 1 cut(s) 564
BseDI CCNNGG 8 cut(s) 125, 459, 798, 837, 963, 1123, 1169, 1215
BseGI GGATG 2 cut(s) 255, 423
BseLI CCNNNNNNNGG 6 cut(s) 646, 838, 977, 978, 1000, 1170
BseMI GCAATG 1 cut(s) 564
BseMII CTCAG 3 cut(s) 264, 351, 1233
BseNI ACTGG 3 cut(s) 37, 606, 1210
BseRI GAGGAG 3 cut(s) 309, 584, 607
BseSI GKGCMC 1 cut(s) 133
BseXI GCAGC 3 cut(s) 278, 757, 854
BsgI GTGCAG 1 cut(s) 285
Bsh1236I CGCG 1 cut(s) 75
Bsh1285I CGRYCG 2 cut(s) 107, 681
BshNI GGYRCC 1 cut(s) 290
BsiEI CGRYCG 2 cut(s) 107, 681
BsiHKCI CYCGRG 1 cut(s) 971
BslI CCNNNNNNNGG 6 cut(s) 646, 838, 977, 978, 1000, 1170
BsmAI GTCTC 6 cut(s) 315, 398, 566, 919, 1017, 1063
BsmBI CGTCTC 1 cut(s) 315
BsoBI CYCGRG 1 cut(s) 971
Bsp1286I GDGCHC 2 cut(s) 133, 718
Bsp143I GATC 1 cut(s) 104
Bsp19I CCATGG 2 cut(s) 125, 798
BspACI CCGC 3 cut(s) 73, 278, 681
BspCNI CTCAG 3 cut(s) 265, 352, 1234
BspFNI CGCG 1 cut(s) 75
BspLI GGNNCC 3 cut(s) 292, 817, 969
BspT107I GGYRCC 1 cut(s) 290
BsrBI CCGCTC 1 cut(s) 683
BsrDI GCAATG 1 cut(s) 564
BsrI ACTGG 3 cut(s) 37, 606, 1210
BssECI CCNNGG 8 cut(s) 125, 459, 798, 837, 963, 1123, 1169, 1215
BssMI GATC 1 cut(s) 104
BssNI GRCGYC 1 cut(s) 1052
BssT1I CCWWGG 7 cut(s) 125, 798, 837, 963, 1123, 1169, 1215
BstACI GRCGYC 1 cut(s) 1052
BstC8I GCNNGC 1 cut(s) 603
BstDEI CTNAG 4 cut(s) 273, 360, 626, 1242
BstDSI CCRYGG 3 cut(s) 125, 459, 798
BstF5I GGATG 2 cut(s) 255, 423
BstFNI CGCG 1 cut(s) 75
BstHHI GCGC 1 cut(s) 745
BstKTI GATC 1 cut(s) 107
BstMAI GTCTC 6 cut(s) 315, 398, 566, 919, 1017, 1063
BstMBI GATC 1 cut(s) 104
BstMCI CGRYCG 2 cut(s) 107, 681
BstMWI GCNNNNNNNGC 4 cut(s) 275, 631, 1229, 1238
BstSLI GKGCMC 1 cut(s) 133
BstUI CGCG 1 cut(s) 75
BstV1I GCAGC 3 cut(s) 278, 757, 854
BstV2I GAAGAC 1 cut(s) 294
BstXI CCANNNNNNTGG 1 cut(s) 896
BtgI CCRYGG 3 cut(s) 125, 459, 798
BtsCI GGATG 2 cut(s) 255, 423
BtsI GCAGTG 1 cut(s) 1115
BtsIMutI CAGTG 3 cut(s) 270, 1115, 1203
Cac8I GCNNGC 1 cut(s) 603
CaiI CAGNNNCTG 1 cut(s) 272
CfoI GCGC 1 cut(s) 745
Cfr13I GGNCC 1 cut(s) 991
CseI GACGC 1 cut(s) 1041
Csp6I GTAC 2 cut(s) 904, 1212
CviAII CATG 3 cut(s) 126, 799, 890
CviQI GTAC 2 cut(s) 904, 1212
DdeI CTNAG 4 cut(s) 273, 360, 626, 1242
DpnI GATC 1 cut(s) 106
DpnII GATC 1 cut(s) 104
DraIII CACNNNGTG 1 cut(s) 643
EaeI YGGCCR 6 cut(s) 205, 279, 384, 484, 537, 795
Eco130I CCWWGG 7 cut(s) 125, 798, 837, 963, 1123, 1169, 1215
Eco24I GRGCYC 1 cut(s) 718
Eco47I GGWCC 1 cut(s) 991
Eco57I CTGAAG 2 cut(s) 740, 1181
Eco88I CYCGRG 1 cut(s) 971
EcoT14I CCWWGG 7 cut(s) 125, 798, 837, 963, 1123, 1169, 1215
EcoT38I GRGCYC 1 cut(s) 718
ErhI CCWWGG 7 cut(s) 125, 798, 837, 963, 1123, 1169, 1215
Esp3I CGTCTC 1 cut(s) 315
FaeI CATG 3 cut(s) 129, 802, 893
FaiI YATR 9 cut(s) 127, 200, 261, 509, 566, 800, 891, 989, 1178
FalI AAGNNNNNCTT 2 cut(s) 947, 979
FatI CATG 3 cut(s) 125, 798, 889
Fnu4HI GCNGC 5 cut(s) 73, 267, 279, 746, 843
FokI GGATG 2 cut(s) 242, 410
FriOI GRGCYC 1 cut(s) 718
Fsp4HI GCNGC 5 cut(s) 73, 267, 279, 746, 843
FspBI CTAG 8 cut(s) 21, 99, 401, 441, 641, 659, 863, 1170
GlaI GCGC 1 cut(s) 744
GluI GCNGC 5 cut(s) 73, 267, 279, 746, 843
HgaI GACGC 1 cut(s) 1041
HhaI GCGC 1 cut(s) 745
Hin1I GRCGYC 1 cut(s) 1052
Hin1II CATG 3 cut(s) 129, 802, 893
Hin6I GCGC 1 cut(s) 743
HinP1I GCGC 1 cut(s) 743
HincII GTYRAC 1 cut(s) 873
HindII GTYRAC 1 cut(s) 873
HindIII AAGCTT 1 cut(s) 1230
HinfI GANTC 3 cut(s) 212, 455, 1010
HphI GGTGA 2 cut(s) 577, 866
Hpy166II GTNNAC 1 cut(s) 873
Hpy188I TCNGA 4 cut(s) 44, 361, 720, 1165
Hpy188III TCNNGA 5 cut(s) 412, 527, 971, 1016, 1199
Hpy8I GTNNAC 1 cut(s) 873
Hpy99I CGWCG 1 cut(s) 625
HpyAV CCTTC 5 cut(s) 409, 715, 1013, 1103, 1205
HpyCH4IV ACGT 2 cut(s) 308, 737
HpyCH4V TGCA 3 cut(s) 116, 266, 1180
HpyF10VI GCNNNNNNNGC 4 cut(s) 275, 631, 1229, 1238
HpyF3I CTNAG 4 cut(s) 273, 360, 626, 1242
HpySE526I ACGT 2 cut(s) 308, 737
Hsp92I GRCGYC 1 cut(s) 1052
Hsp92II CATG 3 cut(s) 129, 802, 893
HspAI GCGC 1 cut(s) 743
Kzo9I GATC 1 cut(s) 104
LmnI GCTCC 2 cut(s) 815, 1095
LpnPI CCDG 8 cut(s) 50, 102, 540, 619, 756, 882, 1184, 1191
Lsp1109I GCAGC 3 cut(s) 278, 757, 854
MaeI CTAG 8 cut(s) 21, 99, 401, 441, 641, 659, 863, 1170
MaeII ACGT 2 cut(s) 308, 737
MaeIII GTNAC 3 cut(s) 672, 807, 1190
MalI GATC 1 cut(s) 106
MbiI CCGCTC 1 cut(s) 683
MboI GATC 1 cut(s) 104
MboII GAAGA 5 cut(s) 16, 232, 294, 380, 967
MfeI CAATTG 3 cut(s) 374, 686, 1046
MhlI GDGCHC 2 cut(s) 133, 718
MlsI TGGCCA 4 cut(s) 207, 386, 486, 797
MluCI AATT 7 cut(s) 374, 519, 686, 758, 1046, 1151, 1159
MluNI TGGCCA 4 cut(s) 207, 386, 486, 797
MlyI GAGTC 2 cut(s) 221, 1019
MmeI TCCRAC 1 cut(s) 1017
Mox20I TGGCCA 4 cut(s) 207, 386, 486, 797
MscI TGGCCA 4 cut(s) 207, 386, 486, 797
MseI TTAA 3 cut(s) 78, 752, 1227
Msp20I TGGCCA 4 cut(s) 207, 386, 486, 797
MunI CAATTG 3 cut(s) 374, 686, 1046
MvnI CGCG 1 cut(s) 75
MwoI GCNNNNNNNGC 4 cut(s) 275, 631, 1229, 1238
NcoI CCATGG 2 cut(s) 125, 798
NdeII GATC 1 cut(s) 104
NlaIII CATG 3 cut(s) 129, 802, 893
NlaIV GGNNCC 3 cut(s) 292, 817, 969
NmuCI GTSAC 1 cut(s) 1190
PcsI WCGNNNNNNNCGW 1 cut(s) 674
PfeI GAWTC 1 cut(s) 455
PkrI GCNGC 5 cut(s) 74, 268, 280, 747, 844
Ple19I CGATCG 1 cut(s) 107
PleI GAGTC 2 cut(s) 220, 1018
PpsI GAGTC 2 cut(s) 220, 1018
Psp1406I AACGTT 1 cut(s) 737
PspN4I GGNNCC 3 cut(s) 292, 817, 969
PspPI GGNCC 1 cut(s) 991
PstNI CAGNNNCTG 1 cut(s) 272
PvuI CGATCG 1 cut(s) 107
RsaI GTAC 2 cut(s) 905, 1213
RsaNI GTAC 2 cut(s) 904, 1212
SaqAI TTAA 3 cut(s) 78, 752, 1227
SatI GCNGC 5 cut(s) 73, 267, 279, 746, 843
Sau3AI GATC 1 cut(s) 104
Sau96I GGNCC 1 cut(s) 991
SchI GAGTC 2 cut(s) 221, 1019
SduI GDGCHC 2 cut(s) 133, 718
SinI GGWCC 1 cut(s) 991
SmlI CTYRAG 1 cut(s) 1184
SmoI CTYRAG 1 cut(s) 1184
Sse9I AATT 7 cut(s) 374, 519, 686, 758, 1046, 1151, 1159
SsiI CCGC 3 cut(s) 73, 278, 681
SspMI CTAG 8 cut(s) 21, 99, 401, 441, 641, 659, 863, 1170
StyI CCWWGG 7 cut(s) 125, 798, 837, 963, 1123, 1169, 1215
TaiI ACGT 2 cut(s) 311, 740
TasI AATT 7 cut(s) 374, 519, 686, 758, 1046, 1151, 1159
TauI GCSGC 2 cut(s) 75, 281
TfiI GAWTC 1 cut(s) 455
Tru1I TTAA 3 cut(s) 78, 752, 1227
Tru9I TTAA 3 cut(s) 78, 752, 1227
TscAI CASTG 3 cut(s) 277, 1115, 1210
TseFI GTSAC 1 cut(s) 1190
TseI GCWGC 3 cut(s) 266, 745, 842
Tsp45I GTSAC 1 cut(s) 1190
TspDTI ATGAA 4 cut(s) 17, 341, 575, 968
TspGWI ACGGA 1 cut(s) 448
TspRI CASTG 3 cut(s) 277, 1115, 1210
VpaK11BI GGWCC 1 cut(s) 991
XapI RAATTY 2 cut(s) 758, 1159
XmaJI CCTAGG 1 cut(s) 1169
XspI CTAG 8 cut(s) 21, 99, 401, 441, 641, 659, 863, 1170
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.