RchiOBHm_Chr2g0152981

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000063
Physical Location & Seq
Forward (+)
70375424 .. 70380388
4965 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ52210

Sequence Viewer

Length: 2841 bp
ATGGCTTCGAAAGGGACCGGAGAAGACAATTATGAAGGCAAGCAAAAAAGTATCACCAAACGCTCATTTGCATTGGCGGAAGCACTAAGTCAAGCCACTGAAAAGAATGCCTCGGCCTTCATGAATAGAATAACACAACGAGTCCAGAATGAAGGTGGGGTACGTCAACTTGGCCCAAGTTTCCAGAGTGATATACCGGCTGATGTGGAAAAAATTTTGAGCCAGCATGAAGTGGATGATTCTAGTTATTTCAGTGAAGGAAAAGCATGGGGAGCATGGGGAACAAAACCAGGAAAATGGCCTGGTGAAACGGCCAACTGGATTCTGTGGGTAGAACGAGTCGAGAAGCGATTTGGGGAAATATGGAAACGACTTGGGATCTATGACGCCATCAAGCTATCCACCATTACTATTCCTTGTGACCGCTCCTTGATGGCTGCCGCTATGTGTTTTTGGAGTTCACAAACAAACTCTCTGGAGCTTCAGTTTGGTGCACTTAGTCCGACCTTGATTGATATAGCGGCCATTATAGGCCTGCCGCCACATGGGCATGTGGTGGACATTGTATTTGCAGAAGGAAAGTTTGACATTGATCTTGGTGGTGAGCTAAGAGATCGAAGTAAGGGCAGACCAGCCGTTGCCAATTATAATACATGGATTGAGGTGTTTAACAGCGGCTTGGGAAATAAGTCACTTGATAGTATTGGCAGTCCAGAAGAGAAAGAGGAAAACCAGCAGGAGACAATGGAAGTAACTCATGTAGAGCATGCTGCGTTTCTTGCCTTTTGGATATGTAAGTACTTAGTGTGCACAACTTCTAAAAAAGTGAATGTGGAGTATTACAAATTGGCTGAAGCATTAGCAAGTAAAGAAGTACAAGAAAGCGATCAGCCATTAGCTCTTGGTCCATTTGTGCTTGCCCACTTATACAGATGTCTGCACCATTGTGTGACCGAAGGACTGAACCCAAATTGGTCTGGGCCATTGTGGATTTTTCAGTTGTGGCTGCACACTTACTTTCCCACTTTCAGACAGCCGGGTTTAGCATTGGCCGTAGACACCACTCTTGGGCAACAATTGGCTCCTCTTGATTTACTTCCTCATTCGGCAGAAGAGTGTTTTGAGGTGTTGTTCAAGTGTCCAGAGTTTTCTGCAGAACAGTTTGCCGTTTGTGTCAGTAGGAAGTATCCATCCTACCTTGCAATGGATATCAGCCAACACGCCTCAGAAAGTGAGACGAGATGGGGGACTGCGTGTTCAGCTTGGAAGAGTGCAATAGGTATGAGGGATCTCTTCTGGGGTGCCTTGTCTGGTAAAACACTCAAGTGTGGAGTGGAGTTATATTCACCATCCTATTTCAGTCGTCAGCTGGGATATTATCAAGCTATACCGGCTCCGGTGCCGGAATCGTCAAACCGATATAGTTCATTGCGAGCCGTTTTCTCCAACAAGGATGACATTGAGCAGAATAACAAGGCGTTTGTGTACAACATGAGCTTTCCCATGAAGACAAGAGTAGCAACTAGCAAGAGTTCCTCTCAGTTCAGAGAGTGGTGGGCGAAACGAGTAGGTAGCCGTTTTAAAGATGGGTTGGTGTCGGCTAGGCGATCGGCTTTTGCAGGGAATCCATGGGCACAAGAGAAGCCGAAAGCTGTAAGGCGTGGTAAAATAATAAGCAAAGTTGCTAGATCAATCCCAACTATAAGTGGCCAAGAGTCTTTGAAGAAGTGTGCTAAAGGGAGCACAAAGAGAAAGGCCATCCATAGTGCGGCCACTGAGGCGGCCAAAGATGGTGCTACCATGTCTTCAACGTCTCAATCTCCTCCAGCGAAACAACTGGCAAAACAAAACGAGCAATCCTCTGAGAGCGAAGAACAATTGTGCGTGGCCAAACGAAGTTGCCTAGAGACATTCAAGAAGGCCAGCGTCCAAAATGCCCTTCCTAGTGAAACAGAGGAATCCGTTGAACTAACCATTGATAAAGATGACCAACCAAGTAGTGACGAACCTGTGGGGGAGATAATTTCTCTTGAAAGAATGGCTGAAAGCAAAGTTGTGACAATGAATATGGAAGAAACACTTGTGCTCACCCAAACTTCAACGCAAGCCAGTATTCCCTCCTCGTCGCTTAGTGAGCAACACCTGGTGTTGGCTAACGAACTAGAAGGTAATCAAGGGTTTGAAGCCGAACTTCAGGCTTTCATGAGGGCATTTTCGGCCGATGCTCTAATCCAACCAGAATGCTACTCAGCCATTTTGCAGTTACCGGCCACTCAATTGACATCAAGGGAGGAAATTGATGGGGCTTTGAAGGTGGTAAAGGAAGCGTTAACGCAGCCATTAAAAGAATTTGTGGAAACAGGCCAACTATCAAAAGTGAAAGTGGCCATGGATTTGTTACTTGGAGCCAAATACTTTGCCCCTCCCAAGGTAGCTCTTATTGGTGAGAAGTTAGAAGTGTTGACCCAACAAATATCCCGTGCAGCTGGTTCTTACCAAGAAATAGAAAAGAGGAGACAACAAATCTCGGCTTGTGAGCAAATGAAGAAAGCCTTGGTTCCCGAGTTTGGGTGGTGTATGGAACAAAAACGGGTTGTGGAGTCTCTTGAAGGCAAGATAAATGAGTTGGAAAGACAATTGGCATCCTTGAAACAAGAGAGACAAGAAGTGGGGGAAAAGCTCATTCAGAGGAGTAAGCAGTGTTTCCAAAGCCAAGGACAACTGAAGAAGATAGAGGCCGATTTGAAAGCTTCCGAGCCTAGGTGTATGCAACTTGAGAGTGACCTTCAGGCCACTAGTTGTACCTTGGGAGCTCTTAATGATTTATTAGCCGAGGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

946

Amino Acids

105.06

Weight (kDa)

5.93

Isoelectric Point (pI)

51.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 126 - 519 1.5e-35 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000063)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21382 FvH4_1g29794 FvH4_1g29795 FvH4_2g35573 FvH4_2g35574 FvH4_4g18552 FvH4_5g16044
malus_domestica MD05G1017000.v1.1
prunus_persica Prupe.3G140800_v2.0.a1 Prupe.6G164100_v2.0.a1
pyrus_communis pycom01g04330 pycom03g19820 pycom04g06720 pycom06g11360 pycom06g19000 pycom10g08100 pycom13g16660 pycom13g27590 pycom13g27640 pycom13g27890 pycom16g11770 pycom16g19530
rosa_chinensis RchiOBHm_Chr1g0317341 RchiOBHm_Chr1g0317351 RchiOBHm_Chr1g0320431 RchiOBHm_Chr1g0320711 RchiOBHm_Chr1g0320721 RchiOBHm_Chr1g0321611 RchiOBHm_Chr1g0321621 RchiOBHm_Chr1g0321631 RchiOBHm_Chr1g0323651 RchiOBHm_Chr1g0332991 RchiOBHm_Chr1g0333001 RchiOBHm_Chr1g0335981 RchiOBHm_Chr1g0335991 RchiOBHm_Chr1g0336001 RchiOBHm_Chr1g0350201 RchiOBHm_Chr1g0368201 RchiOBHm_Chr2g0105531 RchiOBHm_Chr2g0105541 RchiOBHm_Chr2g0116571 RchiOBHm_Chr2g0116581 RchiOBHm_Chr2g0121071 RchiOBHm_Chr2g0131351 RchiOBHm_Chr2g0131661 RchiOBHm_Chr2g0133021 RchiOBHm_Chr2g0138181 RchiOBHm_Chr2g0138191 RchiOBHm_Chr2g0142701 RchiOBHm_Chr2g0142711 RchiOBHm_Chr2g0152981 RchiOBHm_Chr3g0456181 RchiOBHm_Chr3g0456191 RchiOBHm_Chr3g0493631 RchiOBHm_Chr3g0496201 RchiOBHm_Chr4g0401541 RchiOBHm_Chr4g0410311 RchiOBHm_Chr4g0410321 RchiOBHm_Chr4g0419231 RchiOBHm_Chr4g0419511 RchiOBHm_Chr4g0419521 RchiOBHm_Chr5g0004311 RchiOBHm_Chr5g0004321 RchiOBHm_Chr5g0038131 RchiOBHm_Chr5g0038251 RchiOBHm_Chr5g0038261 RchiOBHm_Chr5g0038271 RchiOBHm_Chr5g0052241 RchiOBHm_Chr5g0053911 RchiOBHm_Chr5g0074641 RchiOBHm_Chr5g0076651 RchiOBHm_Chr5g0076661 RchiOBHm_Chr6g0249161 RchiOBHm_Chr6g0249171 RchiOBHm_Chr6g0250961 RchiOBHm_Chr6g0253701 RchiOBHm_Chr6g0262131 RchiOBHm_Chr6g0263181 RchiOBHm_Chr6g0263231 RchiOBHm_Chr6g0263241 RchiOBHm_Chr6g0263251 RchiOBHm_Chr6g0291271 RchiOBHm_Chr7g0194611 RchiOBHm_Chr7g0219691 RchiOBHm_Chr7g0219701 RchiOBHm_Chr7g0225431 RchiOBHm_Chr7g0234221 RchiOBHm_Chr7g0238711 RchiOBHm_Chr7g0238721 RchiOBHm_Chr7g0238731 RchiOBHm_Chr7g0239611 RchiOBHm_Chr7g0239621
rosa_laevigata RLG00000001361 RLG00000001376 RLG00000001860 RLG00000002051 RLG00000002362 RLG00000008940 RLG00000012764 RLG00000018782 RLG00000029639 RLG00000030151
rosa_multiflora Rmu_co8090794.1_g000001 Rmu_co8135356.1_g000001 Rmu_co8224968.1_g000001 Rmu_sc0000016.1_g000020 Rmu_sc0000029.1_g000061 Rmu_sc0000035.1_g000032 Rmu_sc0000060.1_g000041 Rmu_sc0000148.1_g000041 Rmu_sc0000315.1_g000084 Rmu_sc0000527.1_g000005 Rmu_sc0000527.1_g000007 Rmu_sc0000527.1_g000008 Rmu_sc0000648.1_g000002 Rmu_sc0000762.1_g000076 Rmu_sc0000870.1_g000003 Rmu_sc0000870.1_g000004 Rmu_sc0000948.1_g000037 Rmu_sc0000997.1_g000003 Rmu_sc0001047.1_g000041 Rmu_sc0001047.1_g000042 Rmu_sc0001075.1_g000044 Rmu_sc0001174.1_g000006 Rmu_sc0001235.1_g000025 Rmu_sc0001292.1_g000008 Rmu_sc0001301.1_g000038 Rmu_sc0001461.1_g000069 Rmu_sc0001461.1_g000070 Rmu_sc0001669.1_g000041 Rmu_sc0001689.1_g000027 Rmu_sc0001896.1_g000008 Rmu_sc0001909.1_g000013 Rmu_sc0002170.1_g000038 Rmu_sc0002200.1_g000014 Rmu_sc0002283.1_g000027 Rmu_sc0002284.1_g000014 Rmu_sc0002294.1_g000017 Rmu_sc0002294.1_g000018 Rmu_sc0002307.1_g000020 Rmu_sc0002307.1_g000021 Rmu_sc0002307.1_g000023 Rmu_sc0002357.1_g000054 Rmu_sc0002409.1_g000005 Rmu_sc0002535.1_g000002 Rmu_sc0002589.1_g000014 Rmu_sc0002759.1_g000016 Rmu_sc0002759.1_g000017 Rmu_sc0002777.1_g000015 Rmu_sc0002824.1_g000016 Rmu_sc0002872.1_g000005 Rmu_sc0002872.1_g000012 Rmu_sc0002872.1_g000013 Rmu_sc0002942.1_g000019 Rmu_sc0003337.1_g000001 Rmu_sc0003410.1_g000052 Rmu_sc0003445.1_g000010 Rmu_sc0003773.1_g000007 Rmu_sc0003773.1_g000008 Rmu_sc0003895.1_g000002 Rmu_sc0004063.1_g000006 Rmu_sc0004088.1_g000009 Rmu_sc0004088.1_g000010 Rmu_sc0004174.1_g000027 Rmu_sc0004196.1_g000010 Rmu_sc0004515.1_g000006 Rmu_sc0004727.1_g000010 Rmu_sc0004755.1_g000018 Rmu_sc0005016.1_g000030 Rmu_sc0005026.1_g000001 Rmu_sc0005044.1_g000007 Rmu_sc0005284.1_g000001 Rmu_sc0005431.1_g000030 Rmu_sc0005802.1_g000014 Rmu_sc0005802.1_g000015 Rmu_sc0005994.1_g000004 Rmu_sc0005994.1_g000005 Rmu_sc0006059.1_g000048 Rmu_sc0006583.1_g000013 Rmu_sc0006824.1_g000009 Rmu_sc0007458.1_g000005 Rmu_sc0007707.1_g000002 Rmu_sc0008242.1_g000012 Rmu_sc0008713.1_g000006 Rmu_sc0008770.1_g000008 Rmu_sc0009785.1_g000004 Rmu_sc0009785.1_g000005 Rmu_sc0010125.1_g000001 Rmu_sc0010211.1_g000004 Rmu_sc0011034.1_g000001 Rmu_sc0011833.1_g000006 Rmu_sc0014851.1_g000001 Rmu_sc0014899.1_g000001 Rmu_sc0015060.1_g000003 Rmu_sc0015186.1_g000001 Rmu_sc0015248.1_g000003 Rmu_sc0015248.1_g000004 Rmu_sc0015314.1_g000001 Rmu_sc0018098.1_g000002 Rmu_sc0022706.1_g000004 Rmu_sc0023350.1_g000002 Rmu_sc0027636.1_g000001 Rmu_sc0027672.1_g000003 Rmu_sc0030879.1_g000001 Rmu_ssc0000008.1_g000029 Rmu_ssc0000019.1_g000014 Rmu_ssc0000050.1_g000082 Rmu_ssc0000282.1_g000004 Rmu_ssc0000311.1_g000010
rosa_roxburghii Rroxscaffold_1G00015190 Rroxscaffold_1G00031880 Rroxscaffold_1G00031890 Rroxscaffold_1G00059310 Rroxscaffold_1G00060420 Rroxscaffold_1G00067930 Rroxscaffold_1G00075030 Rroxscaffold_2G00082210 Rroxscaffold_2G00122970 Rroxscaffold_3G00218230 Rroxscaffold_3G00219020 Rroxscaffold_3G00219030 Rroxscaffold_3G00223680 Rroxscaffold_3G00223690 Rroxscaffold_3G00223700 Rroxscaffold_3G00226870 Rroxscaffold_3G00226880 Rroxscaffold_3G00232990 Rroxscaffold_3G00265610 Rroxscaffold_3G00265620 Rroxscaffold_3G00265630 Rroxscaffold_4G00318660 Rroxscaffold_4G00319060 Rroxscaffold_4G00323500 Rroxscaffold_5G00357520 Rroxscaffold_5G00366150 Rroxscaffold_5G00377470 Rroxscaffold_6G00395700 Rroxscaffold_6G00413950 Rroxscaffold_7G00187650 Rroxscaffold_7G00198290 Rroxscaffold_7G00198300 Rroxscaffold_7G00208060
rosa_rugosa Rorug01G0173900 Rorug01G0174000 Rorug01G0174100 Rorug01G0174100 Rorug02G0341200 Rorug04G0135700 Rorug04G0135800 Rorug05G0032500 Rorug06G0021800
rosa_samantha Rh1AG036600 Rh1AG245800 Rh1CG021700 Rh1CG021800 Rh1CG085800 Rh1CG085900 Rh1CG187900 Rh1CG229600 Rh1CG239600 Rh1CG246500 Rh1CG246600 Rh2BG478100 Rh2DG341300 Rh2DG366600 Rh2DG375700 Rh2DG384300 Rh2DG487000 Rh2DG504000 Rh2DG504100 Rh3AG311800 Rh3AG327500 Rh3AG328300 Rh3BG345100 Rh3CG320100 Rh4AG005700 Rh4AG067900 Rh4AG068000 Rh4AG084400 Rh4AG106700 Rh4AG160000 Rh4AG173900 Rh4AG174000 Rh4CG125300 Rh4CG125500 Rh4CG264500 Rh4DG110800 Rh5AG047300 Rh5AG085200 Rh5AG126300 Rh5AG127300 Rh5AG203000 Rh5AG332400 Rh5AG332500 Rh5AG342400 Rh5AG344100 Rh5AG375600 Rh5AG378300 Rh5AG386000 Rh5AG529600 Rh5BG125200 Rh5CG137600 Rh5CG137700 Rh5DG125200 Rh6BG134100 Rh6BG175400 Rh6BG179500 Rh6BG179600 Rh6BG181600 Rh6BG181700 Rh6BG191100 Rh6BG232900 Rh6BG259700 Rh6BG259800 Rh7AG028000 Rh7AG319400 Rh7AG352700 Rh7AG352800 Rh7AG352900 Rh7AG482500 Rh7AG482600 Rh7AG503800 Rh7BG334700 Rh7CG200100 Rh7CG336200 Rh7CG370200 Rh7CG370400 Rh7CG370500
rosa_wichuraiana Rw1G001580 Rw1G003570 Rw1G004260 Rw1G004270 Rw1G021170 Rw2G019390 Rw2G040280 Rw2G044050 Rw4G004430 Rw5G010950 Rw5G018350 Rw5G032890 Rw6G002840 Rw6G006510 Rw6G007780 Rw6G033790 Rw7G036320 Rw7G040550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 648
AccB1I GGYRCC 2 cut(s) 1301, 1399
AccBSI CCGCTC 1 cut(s) 426
AccI GTMKAC 1 cut(s) 1056
AciI CCGC 8 cut(s) 77, 424, 441, 521, 539, 675, 1769, 1781
AclWI GGATC 2 cut(s) 386, 1296
AcsI RAATTY 2 cut(s) 213, 2348
AcuI CTGAAG 5 cut(s) 467, 873, 2177, 2744, 2771
AcyI GRCGYC 1 cut(s) 387
AdeI CACNNNGTG 1 cut(s) 2146
AfaI GTAC 5 cut(s) 162, 800, 876, 1487, 2803
AfiI CCNNNNNNNGG 9 cut(s) 545, 1068, 1204, 1768, 2149, 2428, 2567, 2568, 2760
AhlI ACTAGT 1 cut(s) 2795
AjnI CCWGG 3 cut(s) 289, 301, 2142
AjuI GAANNNNNNNTTGG 4 cut(s) 1923, 1955, 2537, 2569
AleI CACNNNNGTG 2 cut(s) 945, 1324
AloI GAACNNNNNNTCC 2 cut(s) 1240, 1272
Alw21I GWGCWC 5 cut(s) 496, 812, 1745, 2088, 2815
Alw26I GTCTC 7 cut(s) 734, 1229, 1818, 1901, 2509, 2607, 2653
Alw44I GTGCAC 2 cut(s) 492, 808
AlwI GGATC 2 cut(s) 386, 1296
Ama87I CYCGRG 1 cut(s) 2561
ApaLI GTGCAC 2 cut(s) 492, 808
ApeKI GCWGC 5 cut(s) 437, 770, 1006, 2335, 2483
ApoI RAATTY 2 cut(s) 213, 2348
ArsI GACNNNNNNTTYG 2 cut(s) 551, 583
AspA2I CCTAGG 1 cut(s) 2759
AspS9I GGNCC 4 cut(s) 15, 173, 905, 980
AsuC2I CCSGG 1 cut(s) 1038
AsuHPI GGTGA 6 cut(s) 46, 317, 614, 1338, 2080, 2456
AsuII TTCGAA 1 cut(s) 8
AvaI CYCGRG 1 cut(s) 2561
AvaII GGWCC 2 cut(s) 15, 905
AvrII CCTAGG 1 cut(s) 2759
BaeGI GKGCMC 3 cut(s) 496, 812, 1636
BalI TGGCCA 3 cut(s) 1710, 1889, 2387
BanI GGYRCC 2 cut(s) 1301, 1399
BanII GRGCYC 1 cut(s) 2815
BarI GAAGNNNNNNTAC 2 cut(s) 144, 176
BbsI GAAGAC 3 cut(s) 30, 1514, 1797
Bbv12I GWGCWC 5 cut(s) 496, 812, 1745, 2088, 2815
BbvI GCAGC 5 cut(s) 424, 757, 993, 2347, 2495
BccI CCATC 9 cut(s) 398, 427, 1198, 1236, 1357, 1580, 1766, 1784, 2294
BceAI ACGGC 6 cut(s) 327, 620, 1037, 1151, 1421, 1560
BciT130I CCWGG 3 cut(s) 291, 303, 2144
BciVI GTATCC 1 cut(s) 1197
BcnI CCSGG 1 cut(s) 1038
BcoDI GTCTC 7 cut(s) 734, 1229, 1818, 1901, 2509, 2607, 2653
BcuI ACTAGT 1 cut(s) 2795
BfaI CTAG 9 cut(s) 243, 1524, 1602, 1686, 1904, 1944, 2162, 2760, 2796
BfmI CTRYAG 1 cut(s) 1152
BfuI GTATCC 1 cut(s) 1197
BglI GCCNNNNNGGC 2 cut(s) 547, 1778
BlnI CCTAGG 1 cut(s) 2759
BmcAI AGTACT 1 cut(s) 800
Bme1390I CCNGG 4 cut(s) 291, 303, 1038, 2144
Bme18I GGWCC 2 cut(s) 15, 905
BmeT110I CYCGRG 1 cut(s) 2561
BmgT120I GGNCC 4 cut(s) 15, 173, 905, 980
BmiI GGNNCC 7 cut(s) 16, 1083, 1303, 1395, 1401, 2407, 2559
BmrFI CCNGG 4 cut(s) 291, 303, 1038, 2144
BmsI GCATC 2 cut(s) 2212, 2651
BpiI GAAGAC 3 cut(s) 30, 1514, 1797
BplI GAGNNNNNCTC 4 cut(s) 1522, 1554, 1844, 1876
BpmI CTGGAG 2 cut(s) 497, 1809
Bpu14I TTCGAA 1 cut(s) 8
BpuEI CTTGAG 2 cut(s) 1307, 2795
BpuMI CCSGG 1 cut(s) 1038
BsaHI GRCGYC 1 cut(s) 387
BsaJI CCNNGG 9 cut(s) 111, 1628, 2388, 2427, 2553, 2713, 2759, 2805, 2832
BsaWI WCCGGW 2 cut(s) 17, 1396
BsaXI ACNNNNNCTCC 2 cut(s) 470, 500
Bsc4I CCNNNNNNNGG 9 cut(s) 545, 1068, 1204, 1768, 2149, 2428, 2567, 2568, 2760
Bse118I RCCGGY 3 cut(s) 196, 1390, 2266
Bse1I ACTGG 3 cut(s) 323, 1842, 2109
Bse3DI GCAATG 2 cut(s) 1209, 1427
BseBI CCWGG 3 cut(s) 291, 303, 2144
BseDI CCNNGG 9 cut(s) 111, 1628, 2388, 2427, 2553, 2713, 2759, 2805, 2832
BseGI GGATG 6 cut(s) 241, 1190, 1349, 1459, 1758, 2642
BseLI CCNNNNNNNGG 9 cut(s) 545, 1068, 1204, 1768, 2149, 2428, 2567, 2568, 2760
BseMI GCAATG 2 cut(s) 1209, 1427
BseMII CTCAG 5 cut(s) 1239, 1553, 1767, 1854, 2262
BseNI ACTGG 3 cut(s) 323, 1842, 2109
BseRI GAGGAG 5 cut(s) 1074, 1812, 2110, 2527, 2704
BseSI GKGCMC 3 cut(s) 496, 812, 1636
BseX3I CGGCCG 1 cut(s) 2217
BseXI GCAGC 5 cut(s) 424, 757, 993, 2347, 2495
BseYI CCCAGC 1 cut(s) 1369
BsgI GTGCAG 3 cut(s) 923, 992, 2502
Bsh1285I CGRYCG 2 cut(s) 1610, 2220
BshNI GGYRCC 2 cut(s) 1301, 1399
BsiEI CGRYCG 2 cut(s) 1610, 2220
BsiHKAI GWGCWC 5 cut(s) 496, 812, 1745, 2088, 2815
BsiHKCI CYCGRG 1 cut(s) 2561
BsiSI CCGG 7 cut(s) 18, 197, 1037, 1391, 1397, 1403, 2267
BslFI GGGAC 2 cut(s) 28, 1261
BslI CCNNNNNNNGG 9 cut(s) 545, 1068, 1204, 1768, 2149, 2428, 2567, 2568, 2760
BsmAI GTCTC 7 cut(s) 734, 1229, 1818, 1901, 2509, 2607, 2653
BsmBI CGTCTC 2 cut(s) 1229, 1818
BsmFI GGGAC 2 cut(s) 28, 1261
BsmI GAATGC 2 cut(s) 112, 2246
BsoBI CYCGRG 1 cut(s) 2561
Bsp119I TTCGAA 1 cut(s) 8
Bsp1286I GDGCHC 6 cut(s) 496, 812, 1636, 1745, 2088, 2815
Bsp1407I TGTACA 1 cut(s) 1485
Bsp143I GATC 7 cut(s) 378, 592, 613, 886, 1288, 1607, 1688
Bsp19I CCATGG 2 cut(s) 1628, 2388
BspACI CCGC 8 cut(s) 77, 424, 441, 521, 539, 675, 1769, 1781
BspCNI CTCAG 5 cut(s) 1238, 1552, 1768, 1855, 2261
BspHI TCATGA 2 cut(s) 120, 2202
BspLI GGNNCC 7 cut(s) 16, 1083, 1303, 1395, 1401, 2407, 2559
BspMAI CTGCAG 1 cut(s) 1156
BspPI GGATC 2 cut(s) 386, 1296
BspT104I TTCGAA 1 cut(s) 8
BspT107I GGYRCC 2 cut(s) 1301, 1399
BsrBI CCGCTC 1 cut(s) 426
BsrDI GCAATG 2 cut(s) 1209, 1427
BsrFI RCCGGY 3 cut(s) 196, 1390, 2266
BsrGI TGTACA 1 cut(s) 1485
BsrI ACTGG 3 cut(s) 323, 1842, 2109
BssAI RCCGGY 3 cut(s) 196, 1390, 2266
BssECI CCNNGG 9 cut(s) 111, 1628, 2388, 2427, 2553, 2713, 2759, 2805, 2832
BssMI GATC 7 cut(s) 378, 592, 613, 886, 1288, 1607, 1688
BssNI GRCGYC 1 cut(s) 387
BssT1I CCWWGG 7 cut(s) 1628, 2388, 2427, 2553, 2713, 2759, 2805
Bst2UI CCWGG 3 cut(s) 291, 303, 2144
Bst4CI ACNGT 1 cut(s) 1161
Bst6I CTCTTC 4 cut(s) 711, 1107, 1262, 1298
BstACI GRCGYC 1 cut(s) 387
BstAUI TGTACA 1 cut(s) 1485
BstBI TTCGAA 1 cut(s) 8
BstC8I GCNNGC 8 cut(s) 41, 224, 536, 768, 918, 1434, 1924, 2106
BstDSI CCRYGG 2 cut(s) 1628, 2388
BstF5I GGATG 6 cut(s) 241, 1190, 1349, 1459, 1758, 2642
BstKTI GATC 7 cut(s) 381, 595, 616, 889, 1291, 1610, 1691
BstMAI GTCTC 7 cut(s) 734, 1229, 1818, 1901, 2509, 2607, 2653
BstMBI GATC 7 cut(s) 378, 592, 613, 886, 1288, 1607, 1688
BstMCI CGRYCG 2 cut(s) 1610, 2220
BstMWI GCNNNNNNNGC 8 cut(s) 272, 547, 779, 1259, 1391, 1778, 2134, 2216
BstNI CCWGG 3 cut(s) 291, 303, 2144
BstNSI RCATGY 2 cut(s) 554, 770
BstSCI CCNGG 4 cut(s) 289, 301, 1036, 2142
BstSFI CTRYAG 1 cut(s) 1152
BstSLI GKGCMC 3 cut(s) 496, 812, 1636
BstV1I GCAGC 5 cut(s) 424, 757, 993, 2347, 2495
BstV2I GAAGAC 3 cut(s) 30, 1514, 1797
BstX2I RGATCY 2 cut(s) 378, 1288
BstXI CCANNNNNNTGG 1 cut(s) 297
BstYI RGATCY 2 cut(s) 378, 1288
BstZI CGGCCG 1 cut(s) 2217
BsuI GTATCC 1 cut(s) 1197
BtgI CCRYGG 2 cut(s) 1628, 2388
BtsCI GGATG 6 cut(s) 241, 1190, 1349, 1459, 1758, 2642
BtsI GCAGTG 1 cut(s) 2705
BtsIMutI CAGTG 4 cut(s) 96, 259, 1773, 2705
Cac8I GCNNGC 8 cut(s) 41, 224, 536, 768, 918, 1434, 1924, 2106
CciI TCATGA 2 cut(s) 120, 2202
Cfr10I RCCGGY 3 cut(s) 196, 1390, 2266
Cfr13I GGNCC 4 cut(s) 15, 173, 905, 980
CseI GACGC 2 cut(s) 395, 1915
CsiI ACCWGGT 1 cut(s) 2142
Csp6I GTAC 5 cut(s) 161, 799, 875, 1486, 2802
CviQI GTAC 5 cut(s) 161, 799, 875, 1486, 2802
DpnI GATC 7 cut(s) 380, 594, 615, 888, 1290, 1609, 1690
DpnII GATC 7 cut(s) 378, 592, 613, 886, 1288, 1607, 1688
DraI TTTAAA 1 cut(s) 1582
DraIII CACNNNGTG 1 cut(s) 2146
EagI CGGCCG 1 cut(s) 2217
Eam1104I CTCTTC 4 cut(s) 711, 1107, 1262, 1298
EarI CTCTTC 4 cut(s) 711, 1107, 1262, 1298
EciI GGCGGA 1 cut(s) 92
Ecl136II GAGCTC 1 cut(s) 2813
EclXI CGGCCG 1 cut(s) 2217
Eco130I CCWWGG 7 cut(s) 1628, 2388, 2427, 2553, 2713, 2759, 2805
Eco147I AGGCCT 1 cut(s) 534
Eco24I GRGCYC 1 cut(s) 2815
Eco32I GATATC 1 cut(s) 1210
Eco47I GGWCC 2 cut(s) 15, 905
Eco52I CGGCCG 1 cut(s) 2217
Eco53kI GAGCTC 1 cut(s) 2813
Eco57I CTGAAG 5 cut(s) 467, 873, 2177, 2744, 2771
Eco88I CYCGRG 1 cut(s) 2561
EcoICRI GAGCTC 1 cut(s) 2813
EcoRII CCWGG 3 cut(s) 289, 301, 2142
EcoRV GATATC 1 cut(s) 1210
EcoT14I CCWWGG 7 cut(s) 1628, 2388, 2427, 2553, 2713, 2759, 2805
EcoT38I GRGCYC 1 cut(s) 2815
ErhI CCWWGG 7 cut(s) 1628, 2388, 2427, 2553, 2713, 2759, 2805
Esp3I CGTCTC 2 cut(s) 1229, 1818
FalI AAGNNNNNCTT 6 cut(s) 2064, 2096, 2175, 2207, 2537, 2569
FaqI GGGAC 2 cut(s) 28, 1261
FblI GTMKAC 1 cut(s) 1056
FokI GGATG 6 cut(s) 248, 1177, 1336, 1466, 1745, 2629
FriOI GRGCYC 1 cut(s) 2815
FspBI CTAG 9 cut(s) 243, 1524, 1602, 1686, 1904, 1944, 2162, 2760, 2796
GsaI CCCAGC 1 cut(s) 1373
GsuI CTGGAG 2 cut(s) 497, 1809
HapII CCGG 7 cut(s) 18, 197, 1037, 1391, 1397, 1403, 2267
HgaI GACGC 2 cut(s) 395, 1915
Hin1I GRCGYC 1 cut(s) 387
HincII GTYRAC 3 cut(s) 167, 2331, 2463
HindII GTYRAC 3 cut(s) 167, 2331, 2463
HindIII AAGCTT 1 cut(s) 2748
HinfI GANTC 9 cut(s) 141, 239, 322, 339, 1406, 1624, 1715, 1958, 2600
HpaI GTTAAC 1 cut(s) 2331
HpaII CCGG 7 cut(s) 18, 197, 1037, 1391, 1397, 1403, 2267
HphI GGTGA 6 cut(s) 46, 317, 614, 1338, 2080, 2456
Hpy166II GTNNAC 9 cut(s) 167, 461, 494, 559, 810, 1057, 1486, 2331, 2463
Hpy188I TCNGA 7 cut(s) 504, 1031, 1228, 1547, 1864, 2688, 2755
Hpy8I GTNNAC 9 cut(s) 167, 461, 494, 559, 810, 1057, 1486, 2331, 2463
Hpy99I CGWCG 1 cut(s) 2128
HpyCH4III ACNGT 1 cut(s) 1161
HpyCH4IV ACGT 2 cut(s) 163, 1811
HpyF10VI GCNNNNNNNGC 8 cut(s) 272, 547, 779, 1259, 1391, 1778, 2134, 2216
HpySE526I ACGT 2 cut(s) 163, 1811
Hsp92I GRCGYC 1 cut(s) 387
KspAI GTTAAC 1 cut(s) 2331
Kzo9I GATC 7 cut(s) 378, 592, 613, 886, 1288, 1607, 1688
LmnI GCTCC 8 cut(s) 272, 431, 478, 1087, 1399, 1740, 2405, 2810
Lsp1109I GCAGC 5 cut(s) 424, 757, 993, 2347, 2495
LweI GCATC 2 cut(s) 2212, 2651
MabI ACCWGGT 1 cut(s) 2142
MaeI CTAG 9 cut(s) 243, 1524, 1602, 1686, 1904, 1944, 2162, 2760, 2796
MaeII ACGT 2 cut(s) 163, 1811
MaeIII GTNAC 9 cut(s) 419, 690, 751, 949, 2000, 2056, 2262, 2397, 2780
MalI GATC 7 cut(s) 380, 594, 615, 888, 1290, 1609, 1690
MbiI CCGCTC 1 cut(s) 426
MboI GATC 7 cut(s) 378, 592, 613, 886, 1288, 1607, 1688
MfeI CAATTG 4 cut(s) 1076, 1877, 2276, 2636
MflI RGATCY 2 cut(s) 378, 1288
MhlI GDGCHC 6 cut(s) 496, 812, 1636, 1745, 2088, 2815
MlsI TGGCCA 3 cut(s) 1710, 1889, 2387
MluNI TGGCCA 3 cut(s) 1710, 1889, 2387
MlyI GAGTC 4 cut(s) 150, 348, 1724, 2609
MmeI TCCRAC 4 cut(s) 527, 1470, 2257, 2607
Mox20I TGGCCA 3 cut(s) 1710, 1889, 2387
MscI TGGCCA 3 cut(s) 1710, 1889, 2387
MseI TTAA 5 cut(s) 669, 1581, 2330, 2342, 2817
MslI CAYNNNNRTG 3 cut(s) 549, 945, 1324
Msp20I TGGCCA 3 cut(s) 1710, 1889, 2387
MspA1I CMGCKG 3 cut(s) 675, 1369, 2486
MspI CCGG 7 cut(s) 18, 197, 1037, 1391, 1397, 1403, 2267
MspR9I CCNGG 4 cut(s) 291, 303, 1038, 2144
MunI CAATTG 4 cut(s) 1076, 1877, 2276, 2636
Mva1269I GAATGC 2 cut(s) 112, 2246
MvaI CCWGG 3 cut(s) 291, 303, 2144
MwoI GCNNNNNNNGC 8 cut(s) 272, 547, 779, 1259, 1391, 1778, 2134, 2216
NciI CCSGG 1 cut(s) 1038
NcoI CCATGG 2 cut(s) 1628, 2388
NdeII GATC 7 cut(s) 378, 592, 613, 886, 1288, 1607, 1688
NlaIV GGNNCC 7 cut(s) 16, 1083, 1303, 1395, 1401, 2407, 2559
NmeAIII GCCGAG 2 cut(s) 92, 2507
NmuCI GTSAC 6 cut(s) 419, 690, 949, 2000, 2056, 2780
NspI RCATGY 2 cut(s) 554, 770
NspV TTCGAA 1 cut(s) 8
OliI CACNNNNGTG 2 cut(s) 945, 1324
PaeI GCATGC 1 cut(s) 770
PagI TCATGA 2 cut(s) 120, 2202
PceI AGGCCT 1 cut(s) 534
PctI GAATGC 2 cut(s) 112, 2246
PfeI GAWTC 5 cut(s) 239, 322, 1406, 1624, 1958
Ple19I CGATCG 1 cut(s) 1610
PleI GAGTC 4 cut(s) 149, 347, 1723, 2608
PpsI GAGTC 4 cut(s) 149, 347, 1723, 2608
PsiI TTATAA 1 cut(s) 648
Psp124BI GAGCTC 1 cut(s) 2815
Psp6I CCWGG 3 cut(s) 289, 301, 2142
PspFI CCCAGC 1 cut(s) 1369
PspGI CCWGG 3 cut(s) 289, 301, 2142
PspN4I GGNNCC 7 cut(s) 16, 1083, 1303, 1395, 1401, 2407, 2559
PspPI GGNCC 4 cut(s) 15, 173, 905, 980
PstI CTGCAG 1 cut(s) 1156
PsuI RGATCY 2 cut(s) 378, 1288
PvuI CGATCG 1 cut(s) 1610
PvuII CAGCTG 2 cut(s) 1369, 2486
RsaI GTAC 5 cut(s) 162, 800, 876, 1487, 2803
RsaNI GTAC 5 cut(s) 161, 799, 875, 1486, 2802
RseI CAYNNNNRTG 3 cut(s) 549, 945, 1324
SacI GAGCTC 1 cut(s) 2815
SaqAI TTAA 5 cut(s) 669, 1581, 2330, 2342, 2817
Sau3AI GATC 7 cut(s) 378, 592, 613, 886, 1288, 1607, 1688
Sau96I GGNCC 4 cut(s) 15, 173, 905, 980
ScaI AGTACT 1 cut(s) 800
SchI GAGTC 4 cut(s) 150, 348, 1724, 2609
ScrFI CCNGG 4 cut(s) 291, 303, 1038, 2144
SduI GDGCHC 6 cut(s) 496, 812, 1636, 1745, 2088, 2815
SexAI ACCWGGT 1 cut(s) 2142
SfaNI GCATC 2 cut(s) 2212, 2651
SfcI CTRYAG 1 cut(s) 1152
SfuI TTCGAA 1 cut(s) 8
SinI GGWCC 2 cut(s) 15, 905
SmiMI CAYNNNNRTG 3 cut(s) 549, 945, 1324
SmlI CTYRAG 2 cut(s) 1322, 2774
SmoI CTYRAG 2 cut(s) 1322, 2774
SpeI ACTAGT 1 cut(s) 2795
SphI GCATGC 1 cut(s) 770
SseBI AGGCCT 1 cut(s) 534
SsiI CCGC 8 cut(s) 77, 424, 441, 521, 539, 675, 1769, 1781
SspMI CTAG 9 cut(s) 243, 1524, 1602, 1686, 1904, 1944, 2162, 2760, 2796
SstI GAGCTC 1 cut(s) 2815
StuI AGGCCT 1 cut(s) 534
StyD4I CCNGG 4 cut(s) 289, 301, 1036, 2142
StyI CCWWGG 7 cut(s) 1628, 2388, 2427, 2553, 2713, 2759, 2805
TaaI ACNGT 1 cut(s) 1161
TaiI ACGT 2 cut(s) 166, 1814
TaqI TCGA 3 cut(s) 8, 342, 616
TaqII GACCGA 1 cut(s) 968
TatI WGTACW 3 cut(s) 798, 874, 1485
TauI GCSGC 6 cut(s) 443, 524, 541, 678, 1772, 1784
TfiI GAWTC 5 cut(s) 239, 322, 1406, 1624, 1958
Tru1I TTAA 5 cut(s) 669, 1581, 2330, 2342, 2817
Tru9I TTAA 5 cut(s) 669, 1581, 2330, 2342, 2817
TscAI CASTG 4 cut(s) 103, 259, 1780, 2705
TseFI GTSAC 6 cut(s) 419, 690, 949, 2000, 2056, 2780
TseI GCWGC 5 cut(s) 437, 770, 1006, 2335, 2483
Tsp45I GTSAC 6 cut(s) 419, 690, 949, 2000, 2056, 2780
TspGWI ACGGA 1 cut(s) 1951
TspRI CASTG 4 cut(s) 103, 259, 1780, 2705
VneI GTGCAC 2 cut(s) 492, 808
VpaK11BI GGWCC 2 cut(s) 15, 905
XapI RAATTY 2 cut(s) 213, 2348
XceI RCATGY 2 cut(s) 554, 770
XcmI CCANNNNNNNNNTGG 1 cut(s) 152
XmaJI CCTAGG 1 cut(s) 2759
XmiI GTMKAC 1 cut(s) 1056
XspI CTAG 9 cut(s) 243, 1524, 1602, 1686, 1904, 1944, 2162, 2760, 2796
ZrmI AGTACT 1 cut(s) 800
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.