Cyclic nucleotide-gated ion channel 1-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PMD | PF10536 | 108 - 322 | 1.4e-32 | Plant mobile domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 465 |
| Acc36I | ACCTGC | 2 cut(s) | 171, 919 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 118, 309, 796 |
| AccI | GTMKAC | 5 cut(s) | 57, 251, 279, 347, 933 |
| AccII | CGCG | 1 cut(s) | 229 |
| AccIII | TCCGGA | 1 cut(s) | 518 |
| AciI | CCGC | 6 cut(s) | 229, 260, 386, 850, 887, 981 |
| AclWI | GGATC | 1 cut(s) | 418 |
| AcoI | YGGCCR | 6 cut(s) | 245, 408, 468, 670, 858, 978 |
| AcsI | RAATTY | 3 cut(s) | 114, 631, 734 |
| AcuI | CTGAAG | 1 cut(s) | 563 |
| AcyI | GRCGYC | 1 cut(s) | 462 |
| AfaI | GTAC | 2 cut(s) | 728, 748 |
| AgsI | TTSAA | 4 cut(s) | 18, 89, 640, 995 |
| AjnI | CCWGG | 6 cut(s) | 242, 272, 749, 765, 789, 855 |
| AluBI | AGCT | 2 cut(s) | 376, 622 |
| AluI | AGCT | 2 cut(s) | 376, 622 |
| Alw21I | GWGCWC | 2 cut(s) | 293, 705 |
| Alw26I | GTCTC | 3 cut(s) | 129, 469, 566 |
| AlwI | GGATC | 1 cut(s) | 418 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 622, 796 |
| Aor13HI | TCCGGA | 1 cut(s) | 518 |
| ApeKI | GCWGC | 6 cut(s) | 193, 269, 376, 509, 622, 852 |
| ApoI | RAATTY | 3 cut(s) | 114, 631, 734 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 39, 71, 106, 138, 552, 584 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 612, 635 |
| AspLEI | GCGC | 4 cut(s) | 68, 229, 820, 1015 |
| AspS9I | GGNCC | 7 cut(s) | 122, 388, 437, 446, 564, 787, 899 |
| AsuC2I | CCSGG | 3 cut(s) | 584, 593, 1025 |
| AsuHPI | GGTGA | 1 cut(s) | 1013 |
| AvaII | GGWCC | 2 cut(s) | 122, 899 |
| AxyI | CCTNAGG | 1 cut(s) | 234 |
| BanII | GRGCYC | 1 cut(s) | 600 |
| BauI | CACGAG | 1 cut(s) | 704 |
| BbsI | GAAGAC | 1 cut(s) | 99 |
| Bbv12I | GWGCWC | 2 cut(s) | 293, 705 |
| BbvI | GCAGC | 6 cut(s) | 180, 256, 363, 496, 609, 839 |
| BccI | CCATC | 4 cut(s) | 344, 461, 479, 839 |
| BceAI | ACGGC | 5 cut(s) | 53, 130, 232, 551, 993 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 34, 68 |
| BciT130I | CCWGG | 6 cut(s) | 244, 274, 751, 767, 791, 857 |
| BcnI | CCSGG | 3 cut(s) | 584, 593, 1025 |
| BcoDI | GTCTC | 3 cut(s) | 129, 469, 566 |
| BfmI | CTRYAG | 1 cut(s) | 194 |
| BfoI | RGCGCY | 3 cut(s) | 69, 821, 1016 |
| BfuAI | ACCTGC | 2 cut(s) | 171, 919 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 444 |
| BlpI | GCTNAGC | 1 cut(s) | 578 |
| Bme1390I | CCNGG | 9 cut(s) | 244, 274, 584, 593, 751, 767, 791, 857, 1025 |
| Bme18I | GGWCC | 2 cut(s) | 122, 899 |
| BmgT120I | GGNCC | 7 cut(s) | 122, 388, 437, 446, 564, 787, 899 |
| BmiI | GGNNCC | 7 cut(s) | 123, 124, 241, 448, 597, 901, 960 |
| BmrFI | CCNGG | 9 cut(s) | 244, 274, 584, 593, 751, 767, 791, 857, 1025 |
| BmsI | GCATC | 1 cut(s) | 322 |
| BpiI | GAAGAC | 1 cut(s) | 99 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 578 |
| BpuEI | CTTGAG | 2 cut(s) | 152, 586 |
| BpuMI | CCSGG | 3 cut(s) | 584, 593, 1025 |
| BsaHI | GRCGYC | 1 cut(s) | 462 |
| BsaJI | CCNNGG | 9 cut(s) | 273, 303, 351, 363, 475, 673, 789, 861, 985 |
| BsaWI | WCCGGW | 4 cut(s) | 60, 282, 518, 952 |
| Bse118I | RCCGGY | 3 cut(s) | 491, 668, 781 |
| Bse1I | ACTGG | 4 cut(s) | 212, 728, 801, 1002 |
| Bse21I | CCTNAGG | 1 cut(s) | 234 |
| BseAI | TCCGGA | 1 cut(s) | 518 |
| BseBI | CCWGG | 6 cut(s) | 244, 274, 751, 767, 791, 857 |
| BseDI | CCNNGG | 9 cut(s) | 273, 303, 351, 363, 475, 673, 789, 861, 985 |
| BseGI | GGATG | 5 cut(s) | 291, 339, 453, 471, 831 |
| BseMII | CTCAG | 3 cut(s) | 248, 383, 835 |
| BseNI | ACTGG | 4 cut(s) | 212, 728, 801, 1002 |
| BseRI | GAGGAG | 1 cut(s) | 522 |
| BseX3I | CGGCCG | 2 cut(s) | 670, 978 |
| BseXI | GCAGC | 6 cut(s) | 180, 256, 363, 496, 609, 839 |
| BsgI | GTGCAG | 1 cut(s) | 608 |
| Bsh1236I | CGCG | 1 cut(s) | 229 |
| Bsh1285I | CGRYCG | 6 cut(s) | 61, 283, 592, 673, 953, 981 |
| BsiEI | CGRYCG | 6 cut(s) | 61, 283, 592, 673, 953, 981 |
| BsiHKAI | GWGCWC | 2 cut(s) | 293, 705 |
| BslFI | GGGAC | 3 cut(s) | 108, 493, 599 |
| BsmAI | GTCTC | 3 cut(s) | 129, 469, 566 |
| BsmBI | CGTCTC | 2 cut(s) | 469, 566 |
| BsmFI | GGGAC | 3 cut(s) | 108, 493, 599 |
| Bsp1286I | GDGCHC | 3 cut(s) | 293, 600, 705 |
| Bsp13I | TCCGGA | 1 cut(s) | 518 |
| Bsp143I | GATC | 3 cut(s) | 33, 423, 879 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 578 |
| Bsp19I | CCATGG | 2 cut(s) | 351, 363 |
| BspACI | CCGC | 6 cut(s) | 229, 260, 386, 850, 887, 981 |
| BspCNI | CTCAG | 3 cut(s) | 247, 384, 834 |
| BspEI | TCCGGA | 1 cut(s) | 518 |
| BspFNI | CGCG | 1 cut(s) | 229 |
| BspLI | GGNNCC | 7 cut(s) | 123, 124, 241, 448, 597, 901, 960 |
| BspMAI | CTGCAG | 1 cut(s) | 198 |
| BspMI | ACCTGC | 2 cut(s) | 171, 919 |
| BspPI | GGATC | 1 cut(s) | 418 |
| BsrFI | RCCGGY | 3 cut(s) | 491, 668, 781 |
| BsrI | ACTGG | 4 cut(s) | 212, 728, 801, 1002 |
| BssAI | RCCGGY | 3 cut(s) | 491, 668, 781 |
| BssECI | CCNNGG | 9 cut(s) | 273, 303, 351, 363, 475, 673, 789, 861, 985 |
| BssMI | GATC | 3 cut(s) | 33, 423, 879 |
| BssNI | GRCGYC | 1 cut(s) | 462 |
| BssSI | CACGAG | 1 cut(s) | 704 |
| BssT1I | CCWWGG | 4 cut(s) | 303, 351, 363, 475 |
| Bst2BI | CACGAG | 1 cut(s) | 704 |
| Bst2UI | CCWGG | 6 cut(s) | 244, 274, 751, 767, 791, 857 |
| Bst4CI | ACNGT | 2 cut(s) | 142, 177 |
| Bst6I | CTCTTC | 1 cut(s) | 722 |
| BstACI | GRCGYC | 1 cut(s) | 462 |
| BstC8I | GCNNGC | 3 cut(s) | 670, 812, 816 |
| BstDEI | CTNAG | 5 cut(s) | 234, 392, 578, 689, 821 |
| BstDSI | CCRYGG | 2 cut(s) | 351, 363 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 167, 194, 860 |
| BstF5I | GGATG | 5 cut(s) | 291, 339, 453, 471, 831 |
| BstFNI | CGCG | 1 cut(s) | 229 |
| BstH2I | RGCGCY | 3 cut(s) | 69, 821, 1016 |
| BstHHI | GCGC | 4 cut(s) | 68, 229, 820, 1015 |
| BstKTI | GATC | 3 cut(s) | 36, 426, 882 |
| BstMAI | GTCTC | 3 cut(s) | 129, 469, 566 |
| BstMBI | GATC | 3 cut(s) | 33, 423, 879 |
| BstMCI | CGRYCG | 6 cut(s) | 61, 283, 592, 673, 953, 981 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 266, 269, 444, 836 |
| BstNI | CCWGG | 6 cut(s) | 244, 274, 751, 767, 791, 857 |
| BstSCI | CCNGG | 9 cut(s) | 242, 272, 582, 591, 749, 765, 789, 855, 1023 |
| BstSFI | CTRYAG | 1 cut(s) | 194 |
| BstUI | CGCG | 1 cut(s) | 229 |
| BstV1I | GCAGC | 6 cut(s) | 180, 256, 363, 496, 609, 839 |
| BstV2I | GAAGAC | 1 cut(s) | 99 |
| BstZI | CGGCCG | 2 cut(s) | 670, 978 |
| Bsu36I | CCTNAGG | 1 cut(s) | 234 |
| BtgI | CCRYGG | 2 cut(s) | 351, 363 |
| BtsCI | GGATG | 5 cut(s) | 291, 339, 453, 471, 831 |
| BtsIMutI | CAGTG | 3 cut(s) | 147, 182, 794 |
| BveI | ACCTGC | 2 cut(s) | 171, 919 |
| Cac8I | GCNNGC | 3 cut(s) | 670, 812, 816 |
| CaiI | CAGNNNCTG | 2 cut(s) | 622, 796 |
| CfoI | GCGC | 4 cut(s) | 68, 229, 820, 1015 |
| Cfr10I | RCCGGY | 3 cut(s) | 491, 668, 781 |
| Cfr13I | GGNCC | 7 cut(s) | 122, 388, 437, 446, 564, 787, 899 |
| CseI | GACGC | 3 cut(s) | 85, 515, 583 |
| CsiI | ACCWGGT | 1 cut(s) | 749 |
| Csp6I | GTAC | 2 cut(s) | 727, 747 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 439, 474 |
| CviAII | CATG | 4 cut(s) | 97, 352, 364, 421 |
| CviQI | GTAC | 2 cut(s) | 727, 747 |
| DdeI | CTNAG | 5 cut(s) | 234, 392, 578, 689, 821 |
| DpnI | GATC | 3 cut(s) | 35, 425, 881 |
| DpnII | GATC | 3 cut(s) | 33, 423, 879 |
| EaeI | YGGCCR | 6 cut(s) | 245, 408, 468, 670, 858, 978 |
| EagI | CGGCCG | 2 cut(s) | 670, 978 |
| Eam1104I | CTCTTC | 1 cut(s) | 722 |
| EarI | CTCTTC | 1 cut(s) | 722 |
| EclXI | CGGCCG | 2 cut(s) | 670, 978 |
| Eco130I | CCWWGG | 4 cut(s) | 303, 351, 363, 475 |
| Eco147I | AGGCCT | 1 cut(s) | 710 |
| Eco24I | GRGCYC | 1 cut(s) | 600 |
| Eco32I | GATATC | 1 cut(s) | 524 |
| Eco47I | GGWCC | 2 cut(s) | 122, 899 |
| Eco52I | CGGCCG | 2 cut(s) | 670, 978 |
| Eco57I | CTGAAG | 1 cut(s) | 563 |
| Eco81I | CCTNAGG | 1 cut(s) | 234 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 167, 194, 860 |
| EcoO109I | RGGNCCY | 1 cut(s) | 122 |
| EcoRII | CCWGG | 6 cut(s) | 242, 272, 749, 765, 789, 855 |
| EcoRV | GATATC | 1 cut(s) | 524 |
| EcoT14I | CCWWGG | 4 cut(s) | 303, 351, 363, 475 |
| EcoT38I | GRGCYC | 1 cut(s) | 600 |
| ErhI | CCWWGG | 4 cut(s) | 303, 351, 363, 475 |
| Esp3I | CGTCTC | 2 cut(s) | 469, 566 |
| FaeI | CATG | 4 cut(s) | 100, 355, 367, 424 |
| FaiI | YATR | 9 cut(s) | 98, 330, 353, 365, 383, 400, 422, 645, 779 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 620, 652, 672, 704 |
| FaqI | GGGAC | 3 cut(s) | 108, 493, 599 |
| FatI | CATG | 4 cut(s) | 96, 351, 363, 420 |
| FauI | CCCGC | 1 cut(s) | 894 |
| FblI | GTMKAC | 5 cut(s) | 57, 251, 279, 347, 933 |
| FokI | GGATG | 5 cut(s) | 298, 326, 440, 458, 818 |
| FriOI | GRGCYC | 1 cut(s) | 600 |
| GlaI | GCGC | 4 cut(s) | 67, 228, 819, 1014 |
| HaeII | RGCGCY | 3 cut(s) | 69, 821, 1016 |
| HgaI | GACGC | 3 cut(s) | 85, 515, 583 |
| HhaI | GCGC | 4 cut(s) | 68, 229, 820, 1015 |
| Hin1I | GRCGYC | 1 cut(s) | 462 |
| Hin1II | CATG | 4 cut(s) | 100, 355, 367, 424 |
| Hin6I | GCGC | 4 cut(s) | 66, 227, 818, 1013 |
| HinP1I | GCGC | 4 cut(s) | 66, 227, 818, 1013 |
| HincII | GTYRAC | 4 cut(s) | 58, 252, 280, 348 |
| HindII | GTYRAC | 4 cut(s) | 58, 252, 280, 348 |
| HinfI | GANTC | 2 cut(s) | 220, 394 |
| HphI | GGTGA | 1 cut(s) | 1013 |
| Hpy166II | GTNNAC | 5 cut(s) | 58, 252, 280, 348, 934 |
| Hpy188I | TCNGA | 3 cut(s) | 28, 134, 618 |
| Hpy188III | TCNNGA | 6 cut(s) | 73, 519, 536, 571, 1005, 1035 |
| Hpy8I | GTNNAC | 5 cut(s) | 58, 252, 280, 348, 934 |
| Hpy99I | CGWCG | 5 cut(s) | 59, 151, 253, 560, 572 |
| HpyCH4III | ACNGT | 2 cut(s) | 142, 177 |
| HpyCH4IV | ACGT | 1 cut(s) | 462 |
| HpyCH4V | TGCA | 4 cut(s) | 45, 196, 625, 928 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 266, 269, 444, 836 |
| HpyF3I | CTNAG | 5 cut(s) | 234, 392, 578, 689, 821 |
| HpySE526I | ACGT | 1 cut(s) | 462 |
| Hsp92I | GRCGYC | 1 cut(s) | 462 |
| Hsp92II | CATG | 4 cut(s) | 100, 355, 367, 424 |
| HspAI | GCGC | 4 cut(s) | 66, 227, 818, 1013 |
| KflI | GGGWCCC | 1 cut(s) | 122 |
| Kpn2I | TCCGGA | 1 cut(s) | 518 |
| KroI | GCCGGC | 1 cut(s) | 668 |
| KroNI | GCCGGC | 1 cut(s) | 670 |
| Kzo9I | GATC | 3 cut(s) | 33, 423, 879 |
| LmnI | GCTCC | 4 cut(s) | 63, 239, 373, 595 |
| Lsp1109I | GCAGC | 6 cut(s) | 180, 256, 363, 496, 609, 839 |
| LweI | GCATC | 1 cut(s) | 322 |
| MabI | ACCWGGT | 1 cut(s) | 749 |
| MaeII | ACGT | 1 cut(s) | 462 |
| MaeIII | GTNAC | 1 cut(s) | 154 |
| MalI | GATC | 3 cut(s) | 35, 425, 881 |
| MboI | GATC | 3 cut(s) | 33, 423, 879 |
| MboII | GAAGA | 9 cut(s) | 101, 104, 289, 620, 628, 650, 692, 709, 1023 |
| MhlI | GDGCHC | 3 cut(s) | 293, 600, 705 |
| MluCI | AATT | 3 cut(s) | 114, 631, 734 |
| MlyI | GAGTC | 2 cut(s) | 214, 403 |
| MmeI | TCCRAC | 1 cut(s) | 940 |
| MroI | TCCGGA | 1 cut(s) | 518 |
| MroNI | GCCGGC | 1 cut(s) | 668 |
| MroXI | GAANNNNTTC | 2 cut(s) | 612, 635 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1033 |
| MspA1I | CMGCKG | 1 cut(s) | 852 |
| MspR9I | CCNGG | 9 cut(s) | 244, 274, 584, 593, 751, 767, 791, 857, 1025 |
| MvaI | CCWGG | 6 cut(s) | 244, 274, 751, 767, 791, 857 |
| MvnI | CGCG | 1 cut(s) | 229 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 266, 269, 444, 836 |
| NaeI | GCCGGC | 1 cut(s) | 670 |
| NciI | CCSGG | 3 cut(s) | 584, 593, 1025 |
| NcoI | CCATGG | 2 cut(s) | 351, 363 |
| NdeII | GATC | 3 cut(s) | 33, 423, 879 |
| NgoMIV | GCCGGC | 1 cut(s) | 668 |
| NlaIII | CATG | 4 cut(s) | 100, 355, 367, 424 |
| NlaIV | GGNNCC | 7 cut(s) | 123, 124, 241, 448, 597, 901, 960 |
| NmeAIII | GCCGAG | 5 cut(s) | 423, 446, 698, 886, 966 |
| NmuCI | GTSAC | 1 cut(s) | 154 |
| PceI | AGGCCT | 1 cut(s) | 710 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 564 |
| PdiI | GCCGGC | 1 cut(s) | 670 |
| PdmI | GAANNNNTTC | 2 cut(s) | 612, 635 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 118, 309, 796 |
| PleI | GAGTC | 2 cut(s) | 214, 402 |
| PpsI | GAGTC | 2 cut(s) | 214, 402 |
| PpuMI | RGGWCCY | 1 cut(s) | 122 |
| Psp5II | RGGWCCY | 1 cut(s) | 122 |
| Psp6I | CCWGG | 6 cut(s) | 242, 272, 749, 765, 789, 855 |
| PspGI | CCWGG | 6 cut(s) | 242, 272, 749, 765, 789, 855 |
| PspN4I | GGNNCC | 7 cut(s) | 123, 124, 241, 448, 597, 901, 960 |
| PspPI | GGNCC | 7 cut(s) | 122, 388, 437, 446, 564, 787, 899 |
| PspPPI | RGGWCCY | 1 cut(s) | 122 |
| PstI | CTGCAG | 1 cut(s) | 198 |
| PstNI | CAGNNNCTG | 2 cut(s) | 622, 796 |
| RsaI | GTAC | 2 cut(s) | 728, 748 |
| RsaNI | GTAC | 2 cut(s) | 727, 747 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1033 |
| SalI | GTCGAC | 4 cut(s) | 56, 250, 278, 346 |
| Sau3AI | GATC | 3 cut(s) | 33, 423, 879 |
| Sau96I | GGNCC | 7 cut(s) | 122, 388, 437, 446, 564, 787, 899 |
| SchI | GAGTC | 2 cut(s) | 214, 403 |
| ScrFI | CCNGG | 9 cut(s) | 244, 274, 584, 593, 751, 767, 791, 857, 1025 |
| SduI | GDGCHC | 3 cut(s) | 293, 600, 705 |
| SexAI | ACCWGGT | 1 cut(s) | 749 |
| SfaNI | GCATC | 1 cut(s) | 322 |
| SfcI | CTRYAG | 1 cut(s) | 194 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 444 |
| SinI | GGWCC | 2 cut(s) | 122, 899 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1033 |
| SmlI | CTYRAG | 2 cut(s) | 167, 601 |
| SmoI | CTYRAG | 2 cut(s) | 167, 601 |
| Sse9I | AATT | 3 cut(s) | 114, 631, 734 |
| SseBI | AGGCCT | 1 cut(s) | 710 |
| SsiI | CCGC | 6 cut(s) | 229, 260, 386, 850, 887, 981 |
| StuI | AGGCCT | 1 cut(s) | 710 |
| StyD4I | CCNGG | 9 cut(s) | 242, 272, 582, 591, 749, 765, 789, 855, 1023 |
| StyI | CCWWGG | 4 cut(s) | 303, 351, 363, 475 |
| TaaI | ACNGT | 2 cut(s) | 142, 177 |
| TaiI | ACGT | 1 cut(s) | 465 |
| TasI | AATT | 3 cut(s) | 114, 631, 734 |
| TauI | GCSGC | 4 cut(s) | 232, 263, 389, 983 |
| TscAI | CASTG | 3 cut(s) | 147, 182, 801 |
| TseFI | GTSAC | 1 cut(s) | 154 |
| TseI | GCWGC | 6 cut(s) | 193, 269, 376, 509, 622, 852 |
| Tsp45I | GTSAC | 1 cut(s) | 154 |
| TspDTI | ATGAA | 2 cut(s) | 488, 727 |
| TspGWI | ACGGA | 1 cut(s) | 912 |
| TspRI | CASTG | 3 cut(s) | 147, 182, 801 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 118, 309, 796 |
| VpaK11BI | GGWCC | 2 cut(s) | 122, 899 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 167, 194, 860 |
| XapI | RAATTY | 3 cut(s) | 114, 631, 734 |
| XmiI | GTMKAC | 5 cut(s) | 57, 251, 279, 347, 933 |
| XmnI | GAANNNNTTC | 2 cut(s) | 612, 635 |
| ZraI | GACGTC | 1 cut(s) | 463 |