Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005026.1

Orthogroup ID

OG0000063

Physical Location & Seq

Genomic Coordinates Reverse (-)

1 .. 3471

Gene Structure 3471 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005026.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2214 bp

atgggtcgccgtagtctgggcacaacgtcgaaacatgccttgacgattcaacaacttgattttcagtcgagaaggtgccctatggctgacgacgcctcagaactcgaaaccgggttggagggtagtgatgcaataaaaacaaaatcggccgagttcgcaaccaaatttatgaaggcttttgatgcttccaaagacacacttcaaaattccgtagtttgtcagctggcgaaaaacaaagaaccgctgggaatgtgcacactggggccgcattactacgcgggcatgccgctggccgtgaaggaggtactagatggttcgttagttgacacgtcatgtcttgcttatggggctagttggtccacctggagctctgagttcaaacttccgcgagtttggccgaaactgactcctgagtggagcaaatgggtgccaaggatggagcatttctttgctcaaaaatggaaggactatggaatatatgatagtataaagatgactgagcaagagattcatatggataggccccttcttgcggcgagcttatgcttctggtcgtctgcaaccaacaccatcaacttgcctctcggtcccatgacccctactttgttagacatggccgcaatatttgggtttcggccgaatggcgaggcggtctgtgctacagccaaattccctagttccttccatgctagtctgaaacctaaagtgataaagaatgacaagaaggctaaagatgacgcagaagctaaggcaaagcaattactcaactatagcaccttttatgccacacatgcagttgatgaagcagtttcggaaactaggaggcaacctccaaaacagcacgaacacgcagccttccttctctattggctttgtaagtttgtattttgctccaagtcaaataagtgcacttttgaatttgttggtattgcagaagctcttagcgtgggtaggcctctagcccttgggccatttgttcttgctcgcctctaccgtgctttacgcaatgcagtgatcgataatatgaatttggatattggagggccattatggatgtttcaagtgtggatacaaacctattttcatgacctccggccgacatgtcctccattcgtccccacaatgacacttggccgtcagattattgctcttggcactcatacacattcagccgcgcagtgttttactttcttttattcaaaaaagactatgtccaaagacgagtttgccatatgttacagccgagatcacccttcttgccttgagatcaacatatcaaaaccatgggataaaaaatttgaattagatgtgattctgacttgggggagttttctgatccctcgagacctgaactatggcctcaaaggcaccgtgggtcggtatggtgttgaggtctatcttcccaattttgttgcacgtcagcttggcttcatacagagttgtccggccttattcttgatgtcaagaaaccacttctcgtcatggagggatgggttcacacgaacttctcagtgttcggccgttggtaactactatgaagagcaatttggcaagtttgagaggtccggcctaaagcctcgttgtcctgatcatagagccaccccacacttccaagcttggtggtcgacttttattatgaaaaatcttggaaaggacttggctgggacccaacgtgttgcattacaaggacttctgaacttgctaggccccaaggaaggtaatggtaagaagaaagcacaggatggcaagttaaaatcaaccaaaggatcctctaaacaaggacaaacatcgaagaaacgtggctcaacattggcgtatactcgggacgccaagaaatcaaagaaatcatctgatgtggtggagaattcggtcacaaacccgacggacactatggttagtgaggacatattttttgaggctaatatggataatggccacgatgctttggctgaaaaccgaaatacgtctgaaattgaggatatggccgaaactggtgacgcctcgatccatagcgtggactctgctgatagcgaaggttattcggaagaagctcaatcagaaagcggcgatcaagaggaattggatgagagccaacttcacaacacatctagcatcggccaacagcttgccatatcaaacaacttttccaaggatgttgaaaacacagatgcacgtggccgagaaacactacttatccaccagacattggttcag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001525 GO:0001568 GO:0001944 GO:0002155 GO:0002254 GO:0002353 GO:0002526 GO:0003008 GO:0003013 GO:0003073 GO:0003085 GO:0003674 GO:0003824 GO:0004177 GO:0005575 GO:0005623 GO:0006508 GO:0006807 GO:0006950 GO:0006952 GO:0006954 GO:0007275 GO:0008015 GO:0008150 GO:0008152 GO:0008217 GO:0008233 GO:0008238 GO:0008239 GO:0009611 GO:0009653 GO:0009966 GO:0010594 GO:0010632 GO:0010646 GO:0016787 GO:0019222 GO:0019538 GO:0023051 GO:0030334 GO:0031323 GO:0032501 GO:0032502 GO:0032879 GO:0033500 GO:0035239 GO:0035295 GO:0040012 GO:0042060 GO:0042592 GO:0042593 GO:0043170 GO:0043535 GO:0044238 GO:0044464 GO:0045178 GO:0045776 GO:0048514 GO:0048583 GO:0048646 GO:0048731 GO:0048856 GO:0048871 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051239 GO:0051270 GO:0060055 GO:0065007 GO:0065008 GO:0070011 GO:0071704 GO:0072358 GO:0072359 GO:0072376 GO:0097009 GO:0140096 GO:1901564 GO:2000145 GO:2000377

KEGG Pathways

Metabolic & Signaling

ko04614 ko04974 map04614 map04974

Pfam Domains

Protein Families

Peptidase_S28

Protein Analysis

738

Amino Acids

82.58

Weight (kDa)

7.81

Isoelectric Point (pI)

36.82

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000063)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g21382 FvH4_1g29794 FvH4_1g29795 FvH4_2g35573 FvH4_2g35574 FvH4_4g18552 FvH4_5g16044
malus_domestica	MD05G1017000.v1.1
prunus_persica	Prupe.3G140800_v2.0.a1 Prupe.6G164100_v2.0.a1
pyrus_communis	pycom01g04330 pycom03g19820 pycom04g06720 pycom06g11360 pycom06g19000 pycom10g08100 pycom13g16660 pycom13g27590 pycom13g27640 pycom13g27890 pycom16g11770 pycom16g19530
rosa_chinensis	RchiOBHm_Chr1g0317341 RchiOBHm_Chr1g0317351 RchiOBHm_Chr1g0320431 RchiOBHm_Chr1g0320711 RchiOBHm_Chr1g0320721 RchiOBHm_Chr1g0321611 RchiOBHm_Chr1g0321621 RchiOBHm_Chr1g0321631 RchiOBHm_Chr1g0323651 RchiOBHm_Chr1g0332991 RchiOBHm_Chr1g0333001 RchiOBHm_Chr1g0335981 RchiOBHm_Chr1g0335991 RchiOBHm_Chr1g0336001 RchiOBHm_Chr1g0350201 RchiOBHm_Chr1g0368201 RchiOBHm_Chr2g0105531 RchiOBHm_Chr2g0105541 RchiOBHm_Chr2g0116571 RchiOBHm_Chr2g0116581 RchiOBHm_Chr2g0121071 RchiOBHm_Chr2g0131351 RchiOBHm_Chr2g0131661 RchiOBHm_Chr2g0133021 RchiOBHm_Chr2g0138181 RchiOBHm_Chr2g0138191 RchiOBHm_Chr2g0142701 RchiOBHm_Chr2g0142711 RchiOBHm_Chr2g0152981 RchiOBHm_Chr3g0456181 RchiOBHm_Chr3g0456191 RchiOBHm_Chr3g0493631 RchiOBHm_Chr3g0496201 RchiOBHm_Chr4g0401541 RchiOBHm_Chr4g0410311 RchiOBHm_Chr4g0410321 RchiOBHm_Chr4g0419231 RchiOBHm_Chr4g0419511 RchiOBHm_Chr4g0419521 RchiOBHm_Chr5g0004311 RchiOBHm_Chr5g0004321 RchiOBHm_Chr5g0038131 RchiOBHm_Chr5g0038251 RchiOBHm_Chr5g0038261 RchiOBHm_Chr5g0038271 RchiOBHm_Chr5g0052241 RchiOBHm_Chr5g0053911 RchiOBHm_Chr5g0074641 RchiOBHm_Chr5g0076651 RchiOBHm_Chr5g0076661 RchiOBHm_Chr6g0249161 RchiOBHm_Chr6g0249171 RchiOBHm_Chr6g0250961 RchiOBHm_Chr6g0253701 RchiOBHm_Chr6g0262131 RchiOBHm_Chr6g0263181 RchiOBHm_Chr6g0263231 RchiOBHm_Chr6g0263241 RchiOBHm_Chr6g0263251 RchiOBHm_Chr6g0291271 RchiOBHm_Chr7g0194611 RchiOBHm_Chr7g0219691 RchiOBHm_Chr7g0219701 RchiOBHm_Chr7g0225431 RchiOBHm_Chr7g0234221 RchiOBHm_Chr7g0238711 RchiOBHm_Chr7g0238721 RchiOBHm_Chr7g0238731 RchiOBHm_Chr7g0239611 RchiOBHm_Chr7g0239621
rosa_laevigata	RLG00000001361 RLG00000001376 RLG00000001860 RLG00000002051 RLG00000002362 RLG00000008940 RLG00000012764 RLG00000018782 RLG00000029639 RLG00000030151
rosa_multiflora	Rmu_co8090794.1_g000001 Rmu_co8135356.1_g000001 Rmu_co8224968.1_g000001 Rmu_sc0000016.1_g000020 Rmu_sc0000029.1_g000061 Rmu_sc0000035.1_g000032 Rmu_sc0000060.1_g000041 Rmu_sc0000148.1_g000041 Rmu_sc0000315.1_g000084 Rmu_sc0000527.1_g000005 Rmu_sc0000527.1_g000007 Rmu_sc0000527.1_g000008 Rmu_sc0000648.1_g000002 Rmu_sc0000762.1_g000076 Rmu_sc0000870.1_g000003 Rmu_sc0000870.1_g000004 Rmu_sc0000948.1_g000037 Rmu_sc0000997.1_g000003 Rmu_sc0001047.1_g000041 Rmu_sc0001047.1_g000042 Rmu_sc0001075.1_g000044 Rmu_sc0001174.1_g000006 Rmu_sc0001235.1_g000025 Rmu_sc0001292.1_g000008 Rmu_sc0001301.1_g000038 Rmu_sc0001461.1_g000069 Rmu_sc0001461.1_g000070 Rmu_sc0001669.1_g000041 Rmu_sc0001689.1_g000027 Rmu_sc0001896.1_g000008 Rmu_sc0001909.1_g000013 Rmu_sc0002170.1_g000038 Rmu_sc0002200.1_g000014 Rmu_sc0002283.1_g000027 Rmu_sc0002284.1_g000014 Rmu_sc0002294.1_g000017 Rmu_sc0002294.1_g000018 Rmu_sc0002307.1_g000020 Rmu_sc0002307.1_g000021 Rmu_sc0002307.1_g000023 Rmu_sc0002357.1_g000054 Rmu_sc0002409.1_g000005 Rmu_sc0002535.1_g000002 Rmu_sc0002589.1_g000014 Rmu_sc0002759.1_g000016 Rmu_sc0002759.1_g000017 Rmu_sc0002777.1_g000015 Rmu_sc0002824.1_g000016 Rmu_sc0002872.1_g000005 Rmu_sc0002872.1_g000012 Rmu_sc0002872.1_g000013 Rmu_sc0002942.1_g000019 Rmu_sc0003337.1_g000001 Rmu_sc0003410.1_g000052 Rmu_sc0003445.1_g000010 Rmu_sc0003773.1_g000007 Rmu_sc0003773.1_g000008 Rmu_sc0003895.1_g000002 Rmu_sc0004063.1_g000006 Rmu_sc0004088.1_g000009 Rmu_sc0004088.1_g000010 Rmu_sc0004174.1_g000027 Rmu_sc0004196.1_g000010 Rmu_sc0004515.1_g000006 Rmu_sc0004727.1_g000010 Rmu_sc0004755.1_g000018 Rmu_sc0005016.1_g000030 Rmu_sc0005026.1_g000001 Rmu_sc0005044.1_g000007 Rmu_sc0005284.1_g000001 Rmu_sc0005431.1_g000030 Rmu_sc0005802.1_g000014 Rmu_sc0005802.1_g000015 Rmu_sc0005994.1_g000004 Rmu_sc0005994.1_g000005 Rmu_sc0006059.1_g000048 Rmu_sc0006583.1_g000013 Rmu_sc0006824.1_g000009 Rmu_sc0007458.1_g000005 Rmu_sc0007707.1_g000002 Rmu_sc0008242.1_g000012 Rmu_sc0008713.1_g000006 Rmu_sc0008770.1_g000008 Rmu_sc0009785.1_g000004 Rmu_sc0009785.1_g000005 Rmu_sc0010125.1_g000001 Rmu_sc0010211.1_g000004 Rmu_sc0011034.1_g000001 Rmu_sc0011833.1_g000006 Rmu_sc0014851.1_g000001 Rmu_sc0014899.1_g000001 Rmu_sc0015060.1_g000003 Rmu_sc0015186.1_g000001 Rmu_sc0015248.1_g000003 Rmu_sc0015248.1_g000004 Rmu_sc0015314.1_g000001 Rmu_sc0018098.1_g000002 Rmu_sc0022706.1_g000004 Rmu_sc0023350.1_g000002 Rmu_sc0027636.1_g000001 Rmu_sc0027672.1_g000003 Rmu_sc0030879.1_g000001 Rmu_ssc0000008.1_g000029 Rmu_ssc0000019.1_g000014 Rmu_ssc0000050.1_g000082 Rmu_ssc0000282.1_g000004 Rmu_ssc0000311.1_g000010
rosa_roxburghii	Rroxscaffold_1G00015190 Rroxscaffold_1G00031880 Rroxscaffold_1G00031890 Rroxscaffold_1G00059310 Rroxscaffold_1G00060420 Rroxscaffold_1G00067930 Rroxscaffold_1G00075030 Rroxscaffold_2G00082210 Rroxscaffold_2G00122970 Rroxscaffold_3G00218230 Rroxscaffold_3G00219020 Rroxscaffold_3G00219030 Rroxscaffold_3G00223680 Rroxscaffold_3G00223690 Rroxscaffold_3G00223700 Rroxscaffold_3G00226870 Rroxscaffold_3G00226880 Rroxscaffold_3G00232990 Rroxscaffold_3G00265610 Rroxscaffold_3G00265620 Rroxscaffold_3G00265630 Rroxscaffold_4G00318660 Rroxscaffold_4G00319060 Rroxscaffold_4G00323500 Rroxscaffold_5G00357520 Rroxscaffold_5G00366150 Rroxscaffold_5G00377470 Rroxscaffold_6G00395700 Rroxscaffold_6G00413950 Rroxscaffold_7G00187650 Rroxscaffold_7G00198290 Rroxscaffold_7G00198300 Rroxscaffold_7G00208060
rosa_rugosa	Rorug01G0173900 Rorug01G0174000 Rorug01G0174100 Rorug01G0174100 Rorug02G0341200 Rorug04G0135700 Rorug04G0135800 Rorug05G0032500 Rorug06G0021800
rosa_samantha	Rh1AG036600 Rh1AG245800 Rh1CG021700 Rh1CG021800 Rh1CG085800 Rh1CG085900 Rh1CG187900 Rh1CG229600 Rh1CG239600 Rh1CG246500 Rh1CG246600 Rh2BG478100 Rh2DG341300 Rh2DG366600 Rh2DG375700 Rh2DG384300 Rh2DG487000 Rh2DG504000 Rh2DG504100 Rh3AG311800 Rh3AG327500 Rh3AG328300 Rh3BG345100 Rh3CG320100 Rh4AG005700 Rh4AG067900 Rh4AG068000 Rh4AG084400 Rh4AG106700 Rh4AG160000 Rh4AG173900 Rh4AG174000 Rh4CG125300 Rh4CG125500 Rh4CG264500 Rh4DG110800 Rh5AG047300 Rh5AG085200 Rh5AG126300 Rh5AG127300 Rh5AG203000 Rh5AG332400 Rh5AG332500 Rh5AG342400 Rh5AG344100 Rh5AG375600 Rh5AG378300 Rh5AG386000 Rh5AG529600 Rh5BG125200 Rh5CG137600 Rh5CG137700 Rh5DG125200 Rh6BG134100 Rh6BG175400 Rh6BG179500 Rh6BG179600 Rh6BG181600 Rh6BG181700 Rh6BG191100 Rh6BG232900 Rh6BG259700 Rh6BG259800 Rh7AG028000 Rh7AG319400 Rh7AG352700 Rh7AG352800 Rh7AG352900 Rh7AG482500 Rh7AG482600 Rh7AG503800 Rh7BG334700 Rh7CG200100 Rh7CG336200 Rh7CG370200 Rh7CG370400 Rh7CG370500
rosa_wichuraiana	Rw1G001580 Rw1G003570 Rw1G004260 Rw1G004270 Rw1G021170 Rw2G019390 Rw2G040280 Rw2G044050 Rw4G004430 Rw5G010950 Rw5G018350 Rw5G032890 Rw6G002840 Rw6G006510 Rw6G007780 Rw6G033790 Rw7G036320 Rw7G040550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	75, 427, 1367
AccB7I	CCANNNNNTGG	2 cut(s)	2014, 2206
AccI	GTMKAC	2 cut(s)	1625, 1817
AccII	CGCG	3 cut(s)	278, 388, 1175
AclWI	GGATC	4 cut(s)	1330, 1761, 1774, 1999
AcsI	RAATTY	7 cut(s)	164, 205, 668, 917, 1027, 1295, 1864
AcvI	CACGTG	1 cut(s)	2174
AcyI	GRCGYC	3 cut(s)	93, 1827, 1998
AfaI	GTAC	1 cut(s)	306
AfiI	CCNNNNNNNGG	6 cut(s)	16, 532, 1377, 1715, 2014, 2206
AflIII	ACRYGT	3 cut(s)	327, 1100, 1672
AgsI	TTSAA	8 cut(s)	50, 203, 379, 917, 1061, 1200, 1301, 2159
AjiI	CACGTC	2 cut(s)	330, 1418
AjnI	CCWGG	1 cut(s)	362
AjuI	GAANNNNNNNTTGG	2 cut(s)	1530, 1562
AluBI	AGCT	9 cut(s)	223, 369, 540, 746, 938, 1423, 1616, 2051, 2125
AluI	AGCT	9 cut(s)	223, 369, 540, 746, 938, 1423, 1616, 2051, 2125
Alw21I	GWGCWC	3 cut(s)	257, 371, 911
Alw26I	GTCTC	1 cut(s)	1338
Alw44I	GTGCAC	2 cut(s)	253, 907
AlwI	GGATC	4 cut(s)	1330, 1761, 1774, 1999
Ama87I	CYCGRG	2 cut(s)	1341, 1821
ApaLI	GTGCAC	2 cut(s)	253, 907
ApeKI	GCWGC	1 cut(s)	851
ApoI	RAATTY	7 cut(s)	164, 205, 668, 917, 1027, 1295, 1864
ArsI	GACNNNNNNTTYG	4 cut(s)	586, 618, 1895, 1927
AspLEI	GCGC	1 cut(s)	1177
AspS9I	GGNCC	9 cut(s)	263, 357, 522, 587, 968, 1043, 1563, 1665, 1706
AsuC2I	CCSGG	1 cut(s)	112
AsuHPI	GGTGA	2 cut(s)	1241, 2006
AvaI	CYCGRG	2 cut(s)	1341, 1821
AvaII	GGWCC	4 cut(s)	357, 587, 1563, 1665
BaeGI	GKGCMC	4 cut(s)	23, 80, 257, 911
BalI	TGGCCA	1 cut(s)	1935
BamHI	GGATCC	1 cut(s)	1766
BanI	GGYRCC	3 cut(s)	75, 427, 1367
BanII	GRGCYC	1 cut(s)	371
BbrPI	CACGTG	1 cut(s)	2174
Bbv12I	GWGCWC	3 cut(s)	257, 371, 911
BbvI	GCAGC	1 cut(s)	863
BccI	CCATC	5 cut(s)	305, 430, 578, 1484, 1736
BceAI	ACGGC	3 cut(s)	278, 1119, 1505
BciT130I	CCWGG	1 cut(s)	364
BciVI	GTATCC	1 cut(s)	1062
BclI	TGATCA	1 cut(s)	1588
BcnI	CCSGG	1 cut(s)	112
BcoDI	GTCTC	1 cut(s)	1338
BfaI	CTAG	8 cut(s)	308, 351, 675, 690, 819, 959, 1703, 2109
BfmI	CTRYAG	2 cut(s)	660, 769
BfuI	GTATCC	1 cut(s)	1062
BglI	GCCNNNNNGGC	1 cut(s)	1365
BisI	GCNGC	7 cut(s)	266, 287, 534, 618, 852, 1173, 2065
BlsI	GCNGC	7 cut(s)	267, 288, 535, 619, 853, 1174, 2066
Bme1390I	CCNGG	2 cut(s)	112, 364
Bme18I	GGWCC	4 cut(s)	357, 587, 1563, 1665
BmeT110I	CYCGRG	2 cut(s)	1341, 1821
BmgBI	CACGTC	2 cut(s)	330, 1418
BmgT120I	GGNCC	9 cut(s)	263, 357, 522, 587, 968, 1043, 1563, 1665, 1706
BmrFI	CCNGG	2 cut(s)	112, 364
BmrI	ACTGGG	1 cut(s)	269
BmsI	GCATC	5 cut(s)	118, 172, 1930, 2121, 2158
BmuI	ACTGGG	1 cut(s)	269
BplI	GAGNNNNNCTC	2 cut(s)	814, 846
BpmI	CTGGAG	1 cut(s)	385
Bpu10I	CCTNAGC	1 cut(s)	747
BpuEI	CTTGAG	1 cut(s)	1283
BpuMI	CCSGG	1 cut(s)	112
Bsa29I	ATCGAT	1 cut(s)	1017
BsaAI	YACGTR	1 cut(s)	2174
BsaHI	GRCGYC	3 cut(s)	93, 1827, 1998
BsaI	GGTCTC	1 cut(s)	1338
BsaJI	CCNNGG	6 cut(s)	431, 964, 1283, 1371, 1710, 2148
BsaXI	ACNNNNNCTCC	2 cut(s)	1090, 1120
Bsc4I	CCNNNNNNNGG	6 cut(s)	16, 532, 1377, 1715, 2014, 2206
Bse1I	ACTGG	2 cut(s)	264, 1996
Bse3DI	GCAATG	1 cut(s)	1012
BseBI	CCWGG	1 cut(s)	364
BseCI	ATCGAT	1 cut(s)	1017
BseDI	CCNNGG	6 cut(s)	431, 964, 1283, 1371, 1710, 2148
BseGI	GGATG	6 cut(s)	441, 1059, 1495, 1747, 2089, 2158
BseLI	CCNNNNNNNGG	6 cut(s)	16, 532, 1377, 1715, 2014, 2206
BseMI	GCAATG	1 cut(s)	1012
BseMII	CTCAG	5 cut(s)	111, 363, 402, 489, 1523
BseNI	ACTGG	2 cut(s)	264, 1996
BseSI	GKGCMC	4 cut(s)	23, 80, 257, 911
BseX3I	CGGCCG	4 cut(s)	147, 635, 1094, 1518
BseXI	GCAGC	1 cut(s)	863
BseYI	CCCAGC	2 cut(s)	244, 1661
Bsh1236I	CGCG	3 cut(s)	278, 388, 1175
Bsh1285I	CGRYCG	4 cut(s)	150, 638, 1097, 1521
BshNI	GGYRCC	3 cut(s)	75, 427, 1367
BshVI	ATCGAT	1 cut(s)	1017
BsiEI	CGRYCG	4 cut(s)	150, 638, 1097, 1521
BsiHKAI	GWGCWC	3 cut(s)	257, 371, 911
BsiHKCI	CYCGRG	2 cut(s)	1341, 1821
BsiSI	CCGG	4 cut(s)	111, 1093, 1445, 1566
BslFI	GGGAC	4 cut(s)	573, 1100, 1678, 1838
BslI	CCNNNNNNNGG	6 cut(s)	16, 532, 1377, 1715, 2014, 2206
BsmAI	GTCTC	1 cut(s)	1338
BsmFI	GGGAC	4 cut(s)	573, 1100, 1678, 1838
Bso31I	GGTCTC	1 cut(s)	1338
BsoBI	CYCGRG	2 cut(s)	1341, 1821
Bsp1286I	GDGCHC	5 cut(s)	23, 80, 257, 371, 911
Bsp143I	GATC	8 cut(s)	1014, 1246, 1266, 1335, 1588, 1766, 2004, 2068
Bsp19I	CCATGG	1 cut(s)	1283
BspCNI	CTCAG	5 cut(s)	110, 364, 403, 490, 1522
BspDI	ATCGAT	1 cut(s)	1017
BspFNI	CGCG	3 cut(s)	278, 388, 1175
BspHI	TCATGA	1 cut(s)	1084
BspPI	GGATC	4 cut(s)	1330, 1761, 1774, 1999
BspQI	GCTCTTC	1 cut(s)	1533
BspT107I	GGYRCC	3 cut(s)	75, 427, 1367
BspTNI	GGTCTC	1 cut(s)	1338
BsrDI	GCAATG	1 cut(s)	1012
BsrI	ACTGG	2 cut(s)	264, 1996
BssECI	CCNNGG	6 cut(s)	431, 964, 1283, 1371, 1710, 2148
BssMI	GATC	8 cut(s)	1014, 1246, 1266, 1335, 1588, 1766, 2004, 2068
BssNAI	GTATAC	1 cut(s)	1818
BssNI	GRCGYC	3 cut(s)	93, 1827, 1998
BssT1I	CCWWGG	5 cut(s)	431, 964, 1283, 1710, 2148
Bst1107I	GTATAC	1 cut(s)	1818
Bst2UI	CCWGG	1 cut(s)	364
Bst4CI	ACNGT	2 cut(s)	995, 1372
Bst6I	CTCTTC	1 cut(s)	1533
BstACI	GRCGYC	3 cut(s)	93, 1827, 1998
BstBAI	YACGTR	1 cut(s)	2174
BstC8I	GCNNGC	7 cut(s)	225, 280, 284, 291, 538, 985, 2127
BstDEI	CTNAG	7 cut(s)	97, 372, 411, 498, 747, 941, 1509
BstDSI	CCRYGG	2 cut(s)	1283, 1371
BstF5I	GGATG	6 cut(s)	441, 1059, 1495, 1747, 2089, 2158
BstFNI	CGCG	3 cut(s)	278, 388, 1175
BstHHI	GCGC	1 cut(s)	1177
BstKTI	GATC	8 cut(s)	1017, 1249, 1269, 1338, 1591, 1769, 2007, 2071
BstMAI	GTCTC	1 cut(s)	1338
BstMBI	GATC	8 cut(s)	1014, 1246, 1266, 1335, 1588, 1766, 2004, 2068
BstMCI	CGRYCG	4 cut(s)	150, 638, 1097, 1521
BstMWI	GCNNNNNNNGC	8 cut(s)	92, 155, 182, 347, 394, 656, 791, 1365
BstNI	CCWGG	1 cut(s)	364
BstNSI	RCATGY	4 cut(s)	38, 286, 794, 1104
BstSCI	CCNGG	2 cut(s)	110, 362
BstSFI	CTRYAG	2 cut(s)	660, 769
BstSLI	GKGCMC	4 cut(s)	23, 80, 257, 911
BstUI	CGCG	3 cut(s)	278, 388, 1175
BstV1I	GCAGC	1 cut(s)	863
BstX2I	RGATCY	1 cut(s)	1766
BstYI	RGATCY	1 cut(s)	1766
BstZ17I	GTATAC	1 cut(s)	1818
BstZI	CGGCCG	4 cut(s)	147, 635, 1094, 1518
Bsu15I	ATCGAT	1 cut(s)	1017
BsuI	GTATCC	1 cut(s)	1062
BsuTUI	ATCGAT	1 cut(s)	1017
BtgI	CCRYGG	2 cut(s)	1283, 1371
BtrI	CACGTC	2 cut(s)	330, 1418
BtsCI	GGATG	6 cut(s)	441, 1059, 1495, 1747, 2089, 2158
BtsI	GCAGTG	2 cut(s)	1017, 1184
BtsIMutI	CAGTG	4 cut(s)	257, 1017, 1184, 1517
Cac8I	GCNNGC	7 cut(s)	225, 280, 284, 291, 538, 985, 2127
CciI	TCATGA	1 cut(s)	1084
CfoI	GCGC	1 cut(s)	1177
Cfr13I	GGNCC	9 cut(s)	263, 357, 522, 587, 968, 1043, 1563, 1665, 1706
ClaI	ATCGAT	1 cut(s)	1017
CseI	GACGC	4 cut(s)	101, 746, 1835, 2006
Csp6I	GTAC	1 cut(s)	305
CspCI	CAANNNNNGTGG	2 cut(s)	1601, 1636
CviQI	GTAC	1 cut(s)	305
DdeI	CTNAG	7 cut(s)	97, 372, 411, 498, 747, 941, 1509
DpnI	GATC	8 cut(s)	1016, 1248, 1268, 1337, 1590, 1768, 2006, 2070
DpnII	GATC	8 cut(s)	1014, 1246, 1266, 1335, 1588, 1766, 2004, 2068
EagI	CGGCCG	4 cut(s)	147, 635, 1094, 1518
Eam1104I	CTCTTC	1 cut(s)	1533
EarI	CTCTTC	1 cut(s)	1533
Ecl136II	GAGCTC	1 cut(s)	369
EclXI	CGGCCG	4 cut(s)	147, 635, 1094, 1518
Eco130I	CCWWGG	5 cut(s)	431, 964, 1283, 1710, 2148
Eco147I	AGGCCT	1 cut(s)	955
Eco24I	GRGCYC	1 cut(s)	371
Eco31I	GGTCTC	1 cut(s)	1338
Eco47I	GGWCC	4 cut(s)	357, 587, 1563, 1665
Eco52I	CGGCCG	4 cut(s)	147, 635, 1094, 1518
Eco53kI	GAGCTC	1 cut(s)	369
Eco72I	CACGTG	1 cut(s)	2174
Eco88I	CYCGRG	2 cut(s)	1341, 1821
EcoICRI	GAGCTC	1 cut(s)	369
EcoO109I	RGGNCCY	3 cut(s)	522, 1665, 1706
EcoRI	GAATTC	1 cut(s)	1864
EcoRII	CCWGG	1 cut(s)	362
EcoT14I	CCWWGG	5 cut(s)	431, 964, 1283, 1710, 2148
EcoT38I	GRGCYC	1 cut(s)	371
ErhI	CCWWGG	5 cut(s)	431, 964, 1283, 1710, 2148
FalI	AAGNNNNNCTT	2 cut(s)	183, 215
FaqI	GGGAC	4 cut(s)	573, 1100, 1678, 1838
FauI	CCCGC	1 cut(s)	271
FauNDI	CATATG	2 cut(s)	513, 1232
FbaI	TGATCA	1 cut(s)	1588
FblI	GTMKAC	2 cut(s)	1625, 1817
Fnu4HI	GCNGC	7 cut(s)	266, 287, 534, 618, 852, 1173, 2065
FokI	GGATG	6 cut(s)	448, 1066, 1502, 1754, 2096, 2165
FriOI	GRGCYC	1 cut(s)	371
Fsp4HI	GCNGC	7 cut(s)	266, 287, 534, 618, 852, 1173, 2065
FspBI	CTAG	8 cut(s)	308, 351, 675, 690, 819, 959, 1703, 2109
GlaI	GCGC	1 cut(s)	1176
GluI	GCNGC	7 cut(s)	266, 287, 534, 618, 852, 1173, 2065
GsaI	CCCAGC	2 cut(s)	248, 1665
GsuI	CTGGAG	1 cut(s)	385
HapII	CCGG	4 cut(s)	111, 1093, 1445, 1566
HgaI	GACGC	4 cut(s)	101, 746, 1835, 2006
HhaI	GCGC	1 cut(s)	1177
Hin1I	GRCGYC	3 cut(s)	93, 1827, 1998
Hin6I	GCGC	1 cut(s)	1175
HinP1I	GCGC	1 cut(s)	1175
HincII	GTYRAC	2 cut(s)	325, 1626
HindII	GTYRAC	2 cut(s)	325, 1626
HindIII	AAGCTT	1 cut(s)	1614
HinfI	GANTC	5 cut(s)	46, 406, 508, 1312, 2018
HpaII	CCGG	4 cut(s)	111, 1093, 1445, 1566
HphI	GGTGA	2 cut(s)	1241, 2006
Hpy166II	GTNNAC	8 cut(s)	255, 325, 360, 909, 1497, 1626, 1818, 2017
Hpy188III	TCNNGA	9 cut(s)	69, 410, 1085, 1343, 1456, 1464, 1586, 1823, 2072
Hpy8I	GTNNAC	8 cut(s)	255, 325, 360, 909, 1497, 1626, 1818, 2017
Hpy99I	CGWCG	3 cut(s)	31, 95, 1885
HpyCH4III	ACNGT	2 cut(s)	995, 1372
HpyCH4IV	ACGT	7 cut(s)	26, 329, 1417, 1672, 1798, 1964, 2173
HpyF10VI	GCNNNNNNNGC	8 cut(s)	92, 155, 182, 347, 394, 656, 791, 1365
HpyF3I	CTNAG	7 cut(s)	97, 372, 411, 498, 747, 941, 1509
HpySE526I	ACGT	7 cut(s)	26, 329, 1417, 1672, 1798, 1964, 2173
Hsp92I	GRCGYC	3 cut(s)	93, 1827, 1998
HspAI	GCGC	1 cut(s)	1175
KflI	GGGWCCC	1 cut(s)	1665
Ksp22I	TGATCA	1 cut(s)	1588
Kzo9I	GATC	8 cut(s)	1014, 1246, 1266, 1335, 1588, 1766, 2004, 2068
LguI	GCTCTTC	1 cut(s)	1533
LmnI	GCTCC	4 cut(s)	366, 417, 439, 896
Lsp1109I	GCAGC	1 cut(s)	863
LweI	GCATC	5 cut(s)	118, 172, 1930, 2121, 2158
MaeI	CTAG	8 cut(s)	308, 351, 675, 690, 819, 959, 1703, 2109
MaeII	ACGT	7 cut(s)	26, 329, 1417, 1672, 1798, 1964, 2173
MaeIII	GTNAC	4 cut(s)	1235, 1526, 1870, 1994
MalI	GATC	8 cut(s)	1016, 1248, 1268, 1337, 1590, 1768, 2006, 2070
MboI	GATC	8 cut(s)	1014, 1246, 1266, 1335, 1588, 1766, 2004, 2068
MboII	GAAGA	5 cut(s)	1391, 1550, 1741, 1804, 2057
MflI	RGATCY	1 cut(s)	1766
MhlI	GDGCHC	5 cut(s)	23, 80, 257, 371, 911
MlsI	TGGCCA	1 cut(s)	1935
MluNI	TGGCCA	1 cut(s)	1935
MlyI	GAGTC	2 cut(s)	400, 2012
MmeI	TCCRAC	1 cut(s)	96
Mox20I	TGGCCA	1 cut(s)	1935
MscI	TGGCCA	1 cut(s)	1935
MseI	TTAA	1 cut(s)	1751
Msp20I	TGGCCA	1 cut(s)	1935
MspA1I	CMGCKG	3 cut(s)	223, 244, 289
MspI	CCGG	4 cut(s)	111, 1093, 1445, 1566
MspR9I	CCNGG	2 cut(s)	112, 364
MvaI	CCWGG	1 cut(s)	364
MvnI	CGCG	3 cut(s)	278, 388, 1175
MwoI	GCNNNNNNNGC	8 cut(s)	92, 155, 182, 347, 394, 656, 791, 1365
NciI	CCSGG	1 cut(s)	112
NcoI	CCATGG	1 cut(s)	1283
NdeI	CATATG	2 cut(s)	513, 1232
NdeII	GATC	8 cut(s)	1014, 1246, 1266, 1335, 1588, 1766, 2004, 2068
NmeAIII	GCCGAG	3 cut(s)	175, 1268, 2204
NmuCI	GTSAC	2 cut(s)	1870, 1994
NspI	RCATGY	4 cut(s)	38, 286, 794, 1104
PaeI	GCATGC	1 cut(s)	286
PaeR7I	CTCGAG	1 cut(s)	1341
PagI	TCATGA	1 cut(s)	1084
PceI	AGGCCT	1 cut(s)	955
PciI	ACATGT	1 cut(s)	1100
PciSI	GCTCTTC	1 cut(s)	1533
PcsI	WCGNNNNNNNCGW	1 cut(s)	991
PfeI	GAWTC	3 cut(s)	46, 508, 1312
PflFI	GACNNNGTC	1 cut(s)	1210
PflMI	CCANNNNNTGG	2 cut(s)	2014, 2206
PkrI	GCNGC	7 cut(s)	267, 288, 535, 619, 853, 1174, 2066
PleI	GAGTC	2 cut(s)	400, 2012
PmaCI	CACGTG	1 cut(s)	2174
PmlI	CACGTG	1 cut(s)	2174
PpsI	GAGTC	2 cut(s)	400, 2012
Ppu21I	YACGTR	1 cut(s)	2174
PpuMI	RGGWCCY	1 cut(s)	1665
PscI	ACATGT	1 cut(s)	1100
Psp124BI	GAGCTC	1 cut(s)	371
Psp5II	RGGWCCY	1 cut(s)	1665
Psp6I	CCWGG	1 cut(s)	362
PspCI	CACGTG	1 cut(s)	2174
PspFI	CCCAGC	2 cut(s)	244, 1661
PspGI	CCWGG	1 cut(s)	362
PspPI	GGNCC	9 cut(s)	263, 357, 522, 587, 968, 1043, 1563, 1665, 1706
PspPPI	RGGWCCY	1 cut(s)	1665
PsuI	RGATCY	1 cut(s)	1766
PsyI	GACNNNGTC	1 cut(s)	1210
PvuII	CAGCTG	1 cut(s)	223
RsaI	GTAC	1 cut(s)	306
RsaNI	GTAC	1 cut(s)	305
SacI	GAGCTC	1 cut(s)	371
SalI	GTCGAC	1 cut(s)	1624
SapI	GCTCTTC	1 cut(s)	1533
SaqAI	TTAA	1 cut(s)	1751
SatI	GCNGC	7 cut(s)	266, 287, 534, 618, 852, 1173, 2065
Sau3AI	GATC	8 cut(s)	1014, 1246, 1266, 1335, 1588, 1766, 2004, 2068
Sau96I	GGNCC	9 cut(s)	263, 357, 522, 587, 968, 1043, 1563, 1665, 1706
SchI	GAGTC	2 cut(s)	400, 2012
ScrFI	CCNGG	2 cut(s)	112, 364
SduI	GDGCHC	5 cut(s)	23, 80, 257, 371, 911
SfaNI	GCATC	5 cut(s)	118, 172, 1930, 2121, 2158
SfcI	CTRYAG	2 cut(s)	660, 769
Sfr274I	CTCGAG	1 cut(s)	1341
SinI	GGWCC	4 cut(s)	357, 587, 1563, 1665
SlaI	CTCGAG	1 cut(s)	1341
SmlI	CTYRAG	2 cut(s)	1262, 1341
SmoI	CTYRAG	2 cut(s)	1262, 1341
SphI	GCATGC	1 cut(s)	286
SseBI	AGGCCT	1 cut(s)	955
SspI	AATATT	1 cut(s)	624
SspMI	CTAG	8 cut(s)	308, 351, 675, 690, 819, 959, 1703, 2109
SstI	GAGCTC	1 cut(s)	371
StuI	AGGCCT	1 cut(s)	955
StyD4I	CCNGG	2 cut(s)	110, 362
StyI	CCWWGG	5 cut(s)	431, 964, 1283, 1710, 2148
TaaI	ACNGT	2 cut(s)	995, 1372
TaiI	ACGT	7 cut(s)	29, 332, 1420, 1675, 1801, 1967, 2176
TaqI	TCGA	8 cut(s)	29, 68, 105, 1017, 1342, 1625, 1790, 2003
TaqII	GACCGA	2 cut(s)	575, 1858
TauI	GCSGC	6 cut(s)	268, 289, 536, 620, 1175, 2067
TfiI	GAWTC	3 cut(s)	46, 508, 1312
Tru1I	TTAA	1 cut(s)	1751
Tru9I	TTAA	1 cut(s)	1751
TscAI	CASTG	4 cut(s)	264, 1017, 1184, 1517
TseFI	GTSAC	2 cut(s)	1870, 1994
TseI	GCWGC	1 cut(s)	851
Tsp45I	GTSAC	2 cut(s)	1870, 1994
TspDTI	ATGAA	8 cut(s)	185, 500, 816, 1040, 1073, 1420, 1551, 1652
TspGWI	ACGGA	2 cut(s)	199, 1898
TspRI	CASTG	4 cut(s)	264, 1017, 1184, 1517
Tth111I	GACNNNGTC	1 cut(s)	1210
Van91I	CCANNNNNTGG	2 cut(s)	2014, 2206
VneI	GTGCAC	2 cut(s)	253, 907
VpaK11BI	GGWCC	4 cut(s)	357, 587, 1563, 1665
XapI	RAATTY	7 cut(s)	164, 205, 668, 917, 1027, 1295, 1864
XceI	RCATGY	4 cut(s)	38, 286, 794, 1104
XhoI	CTCGAG	1 cut(s)	1341
XmiI	GTMKAC	2 cut(s)	1625, 1817
XspI	CTAG	8 cut(s)	308, 351, 675, 690, 819, 959, 1703, 2109

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.