RchiOBHm_Chr2g0131351

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000063
Physical Location & Seq
Reverse (-)
47452832 .. 47456933
4102 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ50271

Sequence Viewer

Length: 2880 bp
ATGGCCGACGATGCTTCGGAACTCGAGGCCGGGTCAGAAGGTAGCGACACACTAACCAAAAATTCGGCCGAGTTTGCCACAAAATTTAAGAAGGCTTTTGATGCTTCCAAAGACACACTTCAAAATTCCGTGGTTTGTCAGCTGGCAAAAAACAAAGAACCGCTGGGAATGTGCACACTGGGGCCGCATTACTACGCGGGCATGCCGCTGGCCATGAAGGAGGTACTAGAGGGCTCATTAGTTGACACGTCATGTCTTGCTTATGGGGCTAGTTGGTCCACCTGGAGTTCTGAGTTCAAACTTCCGCGGGTTTGGCCGAAACTGACCCCTGAGTGGGGCAAATGGGTGCCAAGGATGGAGCATTTCTTTGCTCAAAAATGGAAGGACTATGGAATATATGATAGTATAAAGATGACTGAGCAAGAGATTCATATGGATCGGCCCCTTCTTGCGGCGAGCTTATGCTTCTGGTCGTCTGCAACCAACACCATCAACTTGCCTTTCGGTCCCATGACCCCTACTTTGTTAGACATGGCCGCAATATTTGGGTTTCGGCCGAATGGCGAGGCTGTTTGTGCTACAGCCAAATTCCCTATTGATGAAGCAGTTTCAGAAACTAGGAGGCAACCTCCAAAACAGCACGAACACGCCGCCTTCCTTCTCTATTGGCTTTGTAAGTTTGTATTTTGCTCCAAGTCAAATAAGTGCACTTTTGAATTTGTTGGTATTGCAGAAGCTCTCAGCGTGGGTAGGCCTCTAGCCCTTGGGCCATTTGTTCTTGCTCGCCTCTACCGTGCTTTACGCAATGCAGTGATCGATAATATGAATTTGGATATTGGAGGGCCATTATGGATGTTTCAAGTGTGGATACAGACCTATTTTCATGAGCTCCGGCCGACATGTCCTCCATTTGTCCCCACAATGACACTTGGCCGTCAGATTATTGCCCTTGGCACTCGTACACATTCAGCCGCGCAGTGTTTTGCTTTCTTTTGTTCAAAAAAGACTATGTCCAAAGACGAGTTTGCCATATGTTACAGCCGAGATCACCCTTCTTGCCTTGAGATCAACATATCAAAACCATGGGATAAAAAATTTGAATTGGATGTGATTCTGACTTGGGGGAGTTTTCTGATCTCTCGAGACCTGAACTATGGCCTCAAAGGCACCGTGGGTCGGTATGGTGCGGAGGTCTATCTTCCCAATTTTGTTGCACGTCAGCTTGGCTTCATACAGAGTTGTCCGGCCTTATTCTTGATGTCAAGAAACCACTTCTCGTCATGGAGAGATGGGTTCACACGAACTTCTCAGTGTTCGGCCGTTGGTAACTACTATGAAGAGCAATTTGGCAAGTTTGAGAGATCCGGCCTAAAGCCTCGTTGTCCTGATCATAGAGCCACCCCACACTTCCAAGCTTGGTGGTCGACTTTTATCATGAAAAATCTTGGAAATGACTTGGCTGGGACCCAACGTGCTGCATTACAAGGACTTCCGAACTTGCTAGGCCCCAAGGAAGGTAATGGTAAGAAGAAAGCACCGGATGGCAAGTTAAAATCAACCAAAGGATCCTCTAAACAAGGACAAACATCGAAGAAACGTGGCTCAACATTGGGGTATACTCGGAACGCCAAGAAAACAAAGAAATCATCGGATATGGTGGAGAATTCGGTCACAAACCCGATGGACACTATGGTTAGTGAAGACATATTTTTTGAGGCTAATATGGATGATGGCCACGATGCTTTGGCTGAAAACCGAAATACGTCTGAAATTGAGGATATGGCCGAAACTGGTGACGCCTCGATCCATAGCGCGGACTCGGCCGATAGCGAAGGTTATTCGGAAGAAGCTCAATCAGAAAGTGGCGATCAAGAGAGAGATGGCCGCATTGATCATTCTTTGCCCCCACTTGAAAACTCCATGATTGAGATTGACATGGATGACTTGGGTGAGAGCCAACTGCACAACACATCGAGCATCGGCCAACAGCTTGCCATATCAAACAACTTTTCCAAGGATGTTGAAAACACAGATGCACGTGGCCGAGAAACACTACTTATCCATCAGACATTGGTTCAGGTGGGAGAATCTCGAAGCAGTACAACCCTAGAATTGGCTCTTCTCAACCAAACTGAGCCACATCCTCCTATGTTCGGAACACTTACCTCTCCTCCTAATGACGGGATGTGTCAAAGTGAGCAAGCTATCGTTTGCGCTCCATCTTCGGCCGAGCTTGTGGATCATACAGCGGGTGATCTTGGTTTGGACCTACTTCAATTCCTAAATACTCTAGACAACACCACGAGTCCCGAAGAGGAAAAACTTGAAACAGCCGAAACCAAAAAGGCACTTGAGACGGTCAGACAGTTTTTGGGTTGTGATGTGAGAACAGTGACCGAGGCTAGTTTTCTCTCTTTGAAGGAAGCGGTTGAAGTACTTATTTCAGCCAAACATTTCTCTCAGGTAGAGGCTTATGAAGTTCATGCTCGTTTGGCTGTTGTAAATTTTAGTCTCTCTCCTTGTCTAGAAGCACAAAAAGAGTTTGAAGCAGGCGAGAAGCTGAAAAGTGAGTACGATGACATTCGCCAGTCCACCGATCTTGGCCAACTCCAGAAGTTAAAGACTTCTTTGGACGAAGGAAGGCAAAAAGTGCTTGATCTGAGGAAGCAGTTGGCCGAAGCTGAAAAGCAAGTCAAAGTCACTTCGGCCGCCATCCGAAACATTGTTCCCCAACAAGATCTCACCAAGTATAGCTTGATTCTGTCATCGGTCAAGTCATATAACAAGAAGAGGGGCATCTTGAAGCGAAAGGTCGACCAAGGTATGCAAGACTTGGAAGATGTTAAAGAAGCTCTTCGGTCACTCTTGCCCACTGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans Pkinase cNMP_binding

Protein Analysis

959

Amino Acids

106.82

Weight (kDa)

5.66

Isoelectric Point (pI)

38.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 131 - 196 2e-12 Plant mobile domain
PMD PF10536 212 - 474 1.8e-25 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000063)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21382 FvH4_1g29794 FvH4_1g29795 FvH4_2g35573 FvH4_2g35574 FvH4_4g18552 FvH4_5g16044
malus_domestica MD05G1017000.v1.1
prunus_persica Prupe.3G140800_v2.0.a1 Prupe.6G164100_v2.0.a1
pyrus_communis pycom01g04330 pycom03g19820 pycom04g06720 pycom06g11360 pycom06g19000 pycom10g08100 pycom13g16660 pycom13g27590 pycom13g27640 pycom13g27890 pycom16g11770 pycom16g19530
rosa_chinensis RchiOBHm_Chr1g0317341 RchiOBHm_Chr1g0317351 RchiOBHm_Chr1g0320431 RchiOBHm_Chr1g0320711 RchiOBHm_Chr1g0320721 RchiOBHm_Chr1g0321611 RchiOBHm_Chr1g0321621 RchiOBHm_Chr1g0321631 RchiOBHm_Chr1g0323651 RchiOBHm_Chr1g0332991 RchiOBHm_Chr1g0333001 RchiOBHm_Chr1g0335981 RchiOBHm_Chr1g0335991 RchiOBHm_Chr1g0336001 RchiOBHm_Chr1g0350201 RchiOBHm_Chr1g0368201 RchiOBHm_Chr2g0105531 RchiOBHm_Chr2g0105541 RchiOBHm_Chr2g0116571 RchiOBHm_Chr2g0116581 RchiOBHm_Chr2g0121071 RchiOBHm_Chr2g0131351 RchiOBHm_Chr2g0131661 RchiOBHm_Chr2g0133021 RchiOBHm_Chr2g0138181 RchiOBHm_Chr2g0138191 RchiOBHm_Chr2g0142701 RchiOBHm_Chr2g0142711 RchiOBHm_Chr2g0152981 RchiOBHm_Chr3g0456181 RchiOBHm_Chr3g0456191 RchiOBHm_Chr3g0493631 RchiOBHm_Chr3g0496201 RchiOBHm_Chr4g0401541 RchiOBHm_Chr4g0410311 RchiOBHm_Chr4g0410321 RchiOBHm_Chr4g0419231 RchiOBHm_Chr4g0419511 RchiOBHm_Chr4g0419521 RchiOBHm_Chr5g0004311 RchiOBHm_Chr5g0004321 RchiOBHm_Chr5g0038131 RchiOBHm_Chr5g0038251 RchiOBHm_Chr5g0038261 RchiOBHm_Chr5g0038271 RchiOBHm_Chr5g0052241 RchiOBHm_Chr5g0053911 RchiOBHm_Chr5g0074641 RchiOBHm_Chr5g0076651 RchiOBHm_Chr5g0076661 RchiOBHm_Chr6g0249161 RchiOBHm_Chr6g0249171 RchiOBHm_Chr6g0250961 RchiOBHm_Chr6g0253701 RchiOBHm_Chr6g0262131 RchiOBHm_Chr6g0263181 RchiOBHm_Chr6g0263231 RchiOBHm_Chr6g0263241 RchiOBHm_Chr6g0263251 RchiOBHm_Chr6g0291271 RchiOBHm_Chr7g0194611 RchiOBHm_Chr7g0219691 RchiOBHm_Chr7g0219701 RchiOBHm_Chr7g0225431 RchiOBHm_Chr7g0234221 RchiOBHm_Chr7g0238711 RchiOBHm_Chr7g0238721 RchiOBHm_Chr7g0238731 RchiOBHm_Chr7g0239611 RchiOBHm_Chr7g0239621
rosa_laevigata RLG00000001361 RLG00000001376 RLG00000001860 RLG00000002051 RLG00000002362 RLG00000008940 RLG00000012764 RLG00000018782 RLG00000029639 RLG00000030151
rosa_multiflora Rmu_co8090794.1_g000001 Rmu_co8135356.1_g000001 Rmu_co8224968.1_g000001 Rmu_sc0000016.1_g000020 Rmu_sc0000029.1_g000061 Rmu_sc0000035.1_g000032 Rmu_sc0000060.1_g000041 Rmu_sc0000148.1_g000041 Rmu_sc0000315.1_g000084 Rmu_sc0000527.1_g000005 Rmu_sc0000527.1_g000007 Rmu_sc0000527.1_g000008 Rmu_sc0000648.1_g000002 Rmu_sc0000762.1_g000076 Rmu_sc0000870.1_g000003 Rmu_sc0000870.1_g000004 Rmu_sc0000948.1_g000037 Rmu_sc0000997.1_g000003 Rmu_sc0001047.1_g000041 Rmu_sc0001047.1_g000042 Rmu_sc0001075.1_g000044 Rmu_sc0001174.1_g000006 Rmu_sc0001235.1_g000025 Rmu_sc0001292.1_g000008 Rmu_sc0001301.1_g000038 Rmu_sc0001461.1_g000069 Rmu_sc0001461.1_g000070 Rmu_sc0001669.1_g000041 Rmu_sc0001689.1_g000027 Rmu_sc0001896.1_g000008 Rmu_sc0001909.1_g000013 Rmu_sc0002170.1_g000038 Rmu_sc0002200.1_g000014 Rmu_sc0002283.1_g000027 Rmu_sc0002284.1_g000014 Rmu_sc0002294.1_g000017 Rmu_sc0002294.1_g000018 Rmu_sc0002307.1_g000020 Rmu_sc0002307.1_g000021 Rmu_sc0002307.1_g000023 Rmu_sc0002357.1_g000054 Rmu_sc0002409.1_g000005 Rmu_sc0002535.1_g000002 Rmu_sc0002589.1_g000014 Rmu_sc0002759.1_g000016 Rmu_sc0002759.1_g000017 Rmu_sc0002777.1_g000015 Rmu_sc0002824.1_g000016 Rmu_sc0002872.1_g000005 Rmu_sc0002872.1_g000012 Rmu_sc0002872.1_g000013 Rmu_sc0002942.1_g000019 Rmu_sc0003337.1_g000001 Rmu_sc0003410.1_g000052 Rmu_sc0003445.1_g000010 Rmu_sc0003773.1_g000007 Rmu_sc0003773.1_g000008 Rmu_sc0003895.1_g000002 Rmu_sc0004063.1_g000006 Rmu_sc0004088.1_g000009 Rmu_sc0004088.1_g000010 Rmu_sc0004174.1_g000027 Rmu_sc0004196.1_g000010 Rmu_sc0004515.1_g000006 Rmu_sc0004727.1_g000010 Rmu_sc0004755.1_g000018 Rmu_sc0005016.1_g000030 Rmu_sc0005026.1_g000001 Rmu_sc0005044.1_g000007 Rmu_sc0005284.1_g000001 Rmu_sc0005431.1_g000030 Rmu_sc0005802.1_g000014 Rmu_sc0005802.1_g000015 Rmu_sc0005994.1_g000004 Rmu_sc0005994.1_g000005 Rmu_sc0006059.1_g000048 Rmu_sc0006583.1_g000013 Rmu_sc0006824.1_g000009 Rmu_sc0007458.1_g000005 Rmu_sc0007707.1_g000002 Rmu_sc0008242.1_g000012 Rmu_sc0008713.1_g000006 Rmu_sc0008770.1_g000008 Rmu_sc0009785.1_g000004 Rmu_sc0009785.1_g000005 Rmu_sc0010125.1_g000001 Rmu_sc0010211.1_g000004 Rmu_sc0011034.1_g000001 Rmu_sc0011833.1_g000006 Rmu_sc0014851.1_g000001 Rmu_sc0014899.1_g000001 Rmu_sc0015060.1_g000003 Rmu_sc0015186.1_g000001 Rmu_sc0015248.1_g000003 Rmu_sc0015248.1_g000004 Rmu_sc0015314.1_g000001 Rmu_sc0018098.1_g000002 Rmu_sc0022706.1_g000004 Rmu_sc0023350.1_g000002 Rmu_sc0027636.1_g000001 Rmu_sc0027672.1_g000003 Rmu_sc0030879.1_g000001 Rmu_ssc0000008.1_g000029 Rmu_ssc0000019.1_g000014 Rmu_ssc0000050.1_g000082 Rmu_ssc0000282.1_g000004 Rmu_ssc0000311.1_g000010
rosa_roxburghii Rroxscaffold_1G00015190 Rroxscaffold_1G00031880 Rroxscaffold_1G00031890 Rroxscaffold_1G00059310 Rroxscaffold_1G00060420 Rroxscaffold_1G00067930 Rroxscaffold_1G00075030 Rroxscaffold_2G00082210 Rroxscaffold_2G00122970 Rroxscaffold_3G00218230 Rroxscaffold_3G00219020 Rroxscaffold_3G00219030 Rroxscaffold_3G00223680 Rroxscaffold_3G00223690 Rroxscaffold_3G00223700 Rroxscaffold_3G00226870 Rroxscaffold_3G00226880 Rroxscaffold_3G00232990 Rroxscaffold_3G00265610 Rroxscaffold_3G00265620 Rroxscaffold_3G00265630 Rroxscaffold_4G00318660 Rroxscaffold_4G00319060 Rroxscaffold_4G00323500 Rroxscaffold_5G00357520 Rroxscaffold_5G00366150 Rroxscaffold_5G00377470 Rroxscaffold_6G00395700 Rroxscaffold_6G00413950 Rroxscaffold_7G00187650 Rroxscaffold_7G00198290 Rroxscaffold_7G00198300 Rroxscaffold_7G00208060
rosa_rugosa Rorug01G0173900 Rorug01G0174000 Rorug01G0174100 Rorug01G0174100 Rorug02G0341200 Rorug04G0135700 Rorug04G0135800 Rorug05G0032500 Rorug06G0021800
rosa_samantha Rh1AG036600 Rh1AG245800 Rh1CG021700 Rh1CG021800 Rh1CG085800 Rh1CG085900 Rh1CG187900 Rh1CG229600 Rh1CG239600 Rh1CG246500 Rh1CG246600 Rh2BG478100 Rh2DG341300 Rh2DG366600 Rh2DG375700 Rh2DG384300 Rh2DG487000 Rh2DG504000 Rh2DG504100 Rh3AG311800 Rh3AG327500 Rh3AG328300 Rh3BG345100 Rh3CG320100 Rh4AG005700 Rh4AG067900 Rh4AG068000 Rh4AG084400 Rh4AG106700 Rh4AG160000 Rh4AG173900 Rh4AG174000 Rh4CG125300 Rh4CG125500 Rh4CG264500 Rh4DG110800 Rh5AG047300 Rh5AG085200 Rh5AG126300 Rh5AG127300 Rh5AG203000 Rh5AG332400 Rh5AG332500 Rh5AG342400 Rh5AG344100 Rh5AG375600 Rh5AG378300 Rh5AG386000 Rh5AG529600 Rh5BG125200 Rh5CG137600 Rh5CG137700 Rh5DG125200 Rh6BG134100 Rh6BG175400 Rh6BG179500 Rh6BG179600 Rh6BG181600 Rh6BG181700 Rh6BG191100 Rh6BG232900 Rh6BG259700 Rh6BG259800 Rh7AG028000 Rh7AG319400 Rh7AG352700 Rh7AG352800 Rh7AG352900 Rh7AG482500 Rh7AG482600 Rh7AG503800 Rh7BG334700 Rh7CG200100 Rh7CG336200 Rh7CG370200 Rh7CG370400 Rh7CG370500
rosa_wichuraiana Rw1G001580 Rw1G003570 Rw1G004260 Rw1G004270 Rw1G021170 Rw2G019390 Rw2G040280 Rw2G044050 Rw4G004430 Rw5G010950 Rw5G018350 Rw5G032890 Rw6G002840 Rw6G006510 Rw6G007780 Rw6G033790 Rw7G036320 Rw7G040550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 346, 1166
AccI GTMKAC 3 cut(s) 1424, 1616, 2814
AccII CGCG 4 cut(s) 197, 307, 974, 1814
AclWI GGATC 6 cut(s) 444, 1356, 1560, 1573, 1798, 2247
AcsI RAATTY 9 cut(s) 61, 83, 124, 587, 716, 826, 1094, 1663, 2503
AcvI CACGTG 1 cut(s) 2039
AcyI GRCGYC 1 cut(s) 1797
AfaI GTAC 5 cut(s) 225, 961, 2101, 2436, 2573
AflIII ACRYGT 2 cut(s) 246, 899
AjiI CACGTC 2 cut(s) 249, 1217
AjnI CCWGG 1 cut(s) 281
AjuI GAANNNNNNNTTGG 2 cut(s) 1329, 1361
Alw21I GWGCWC 3 cut(s) 176, 710, 891
Alw26I GTCTC 3 cut(s) 1137, 2348, 2516
Alw44I GTGCAC 2 cut(s) 172, 706
AlwI GGATC 6 cut(s) 444, 1356, 1560, 1573, 1798, 2247
Ama87I CYCGRG 2 cut(s) 23, 1140
ApaLI GTGCAC 2 cut(s) 172, 706
ApeKI GCWGC 1 cut(s) 1475
ApoI RAATTY 9 cut(s) 61, 83, 124, 587, 716, 826, 1094, 1663, 2503
ArsI GACNNNNNNTTYG 4 cut(s) 505, 537, 1694, 1726
Asp700I GAANNNNTTC 1 cut(s) 2853
AspLEI GCGC 3 cut(s) 976, 1814, 2216
AspS9I GGNCC 9 cut(s) 182, 276, 441, 506, 767, 842, 1464, 1505, 2266
AsuC2I CCSGG 1 cut(s) 31
AsuHPI GGTGA 5 cut(s) 1040, 1805, 1961, 2264, 2734
AvaI CYCGRG 2 cut(s) 23, 1140
AvaII GGWCC 4 cut(s) 276, 506, 1464, 2266
BaeGI GKGCMC 2 cut(s) 176, 710
BalI TGGCCA 3 cut(s) 212, 1734, 2604
BamHI GGATCC 1 cut(s) 1565
BanI GGYRCC 2 cut(s) 346, 1166
BanII GRGCYC 2 cut(s) 236, 891
BauI CACGAG 1 cut(s) 2302
BbrPI CACGTG 1 cut(s) 2039
BbsI GAAGAC 1 cut(s) 1707
Bbv12I GWGCWC 3 cut(s) 176, 710, 891
BbvI GCAGC 1 cut(s) 1462
BceAI ACGGC 2 cut(s) 918, 1304
BciT130I CCWGG 1 cut(s) 283
BciVI GTATCC 1 cut(s) 861
BclI TGATCA 2 cut(s) 1387, 1891
BcnI CCSGG 1 cut(s) 31
BcoDI GTCTC 3 cut(s) 1137, 2348, 2516
BfaI CTAG 9 cut(s) 227, 270, 618, 758, 1502, 2108, 2291, 2403, 2525
BfmI CTRYAG 1 cut(s) 579
BfuI GTATCC 1 cut(s) 861
BglI GCCNNNNNGGC 1 cut(s) 1164
BglII AGATCT 1 cut(s) 2737
BisI GCNGC 9 cut(s) 185, 206, 453, 537, 651, 972, 1476, 1885, 2709
BlsI GCNGC 9 cut(s) 186, 207, 454, 538, 652, 973, 1477, 1886, 2710
BmcAI AGTACT 1 cut(s) 2436
Bme1390I CCNGG 2 cut(s) 31, 283
Bme18I GGWCC 4 cut(s) 276, 506, 1464, 2266
BmeT110I CYCGRG 2 cut(s) 23, 1140
BmgBI CACGTC 2 cut(s) 249, 1217
BmgT120I GGNCC 9 cut(s) 182, 276, 441, 506, 767, 842, 1464, 1505, 2266
BmiI GGNNCC 9 cut(s) 183, 348, 443, 508, 1168, 1465, 1466, 1507, 1567
BmrFI CCNGG 2 cut(s) 31, 283
BmrI ACTGGG 1 cut(s) 188
BmsI GCATC 5 cut(s) 91, 1729, 1986, 2023, 2805
BmuI ACTGGG 1 cut(s) 188
BpiI GAAGAC 1 cut(s) 1707
BplI GAGNNNNNCTC 2 cut(s) 613, 645
BpmI CTGGAG 2 cut(s) 304, 2594
BpuEI CTTGAG 2 cut(s) 1082, 2372
BpuMI CCSGG 1 cut(s) 31
Bsa29I ATCGAT 1 cut(s) 816
BsaAI YACGTR 1 cut(s) 2039
BsaHI GRCGYC 1 cut(s) 1797
BsaI GGTCTC 1 cut(s) 1137
BsaWI WCCGGW 1 cut(s) 1537
BsaXI ACNNNNNCTCC 4 cut(s) 889, 919, 2155, 2185
Bse1I ACTGG 3 cut(s) 183, 1795, 2587
Bse3DI GCAATG 1 cut(s) 811
BseBI CCWGG 1 cut(s) 283
BseCI ATCGAT 1 cut(s) 816
BseMI GCAATG 1 cut(s) 811
BseMII CTCAG 8 cut(s) 282, 321, 408, 754, 1322, 2124, 2474, 2651
BseNI ACTGG 3 cut(s) 183, 1795, 2587
BseRI GAGGAG 1 cut(s) 2160
BseSI GKGCMC 2 cut(s) 176, 710
BseX3I CGGCCG 7 cut(s) 66, 554, 893, 1317, 1821, 2226, 2706
BseXI GCAGC 1 cut(s) 1462
BseYI CCCAGC 2 cut(s) 163, 1460
BsgI GTGCAG 1 cut(s) 1946
Bsh1236I CGCG 4 cut(s) 197, 307, 974, 1814
Bsh1285I CGRYCG 7 cut(s) 69, 557, 896, 1320, 1824, 2229, 2709
BshNI GGYRCC 2 cut(s) 346, 1166
BshVI ATCGAT 1 cut(s) 816
BsiEI CGRYCG 7 cut(s) 69, 557, 896, 1320, 1824, 2229, 2709
BsiHKAI GWGCWC 3 cut(s) 176, 710, 891
BsiHKCI CYCGRG 2 cut(s) 23, 1140
BsiSI CCGG 5 cut(s) 30, 892, 1244, 1365, 1538
BslFI GGGAC 4 cut(s) 492, 899, 1477, 2292
BsmAI GTCTC 3 cut(s) 1137, 2348, 2516
BsmBI CGTCTC 1 cut(s) 2348
BsmFI GGGAC 4 cut(s) 492, 899, 1477, 2292
Bso31I GGTCTC 1 cut(s) 1137
BsoBI CYCGRG 2 cut(s) 23, 1140
Bsp1286I GDGCHC 4 cut(s) 176, 236, 710, 891
Bsp19I CCATGG 1 cut(s) 1082
BspCNI CTCAG 8 cut(s) 283, 322, 409, 753, 1321, 2125, 2473, 2652
BspDI ATCGAT 1 cut(s) 816
BspFNI CGCG 4 cut(s) 197, 307, 974, 1814
BspHI TCATGA 2 cut(s) 883, 1434
BspLI GGNNCC 9 cut(s) 183, 348, 443, 508, 1168, 1465, 1466, 1507, 1567
BspPI GGATC 6 cut(s) 444, 1356, 1560, 1573, 1798, 2247
BspQI GCTCTTC 3 cut(s) 1332, 2124, 2859
BspT107I GGYRCC 2 cut(s) 346, 1166
BspTNI GGTCTC 1 cut(s) 1137
BsrDI GCAATG 1 cut(s) 811
BsrI ACTGG 3 cut(s) 183, 1795, 2587
BssNAI GTATAC 1 cut(s) 1617
BssNI GRCGYC 1 cut(s) 1797
BssSI CACGAG 1 cut(s) 2302
BssT1I CCWWGG 7 cut(s) 350, 763, 949, 1082, 1509, 2013, 2818
Bst1107I GTATAC 1 cut(s) 1617
Bst2BI CACGAG 1 cut(s) 2302
Bst2UI CCWGG 1 cut(s) 283
Bst4CI ACNGT 5 cut(s) 794, 1171, 2359, 2367, 2392
Bst6I CTCTTC 5 cut(s) 1332, 2124, 2307, 2783, 2859
BstACI GRCGYC 1 cut(s) 1797
BstAPI GCANNNNNTGC 1 cut(s) 2650
BstBAI YACGTR 1 cut(s) 2039
BstC8I GCNNGC 9 cut(s) 144, 199, 203, 210, 457, 784, 1992, 2202, 2551
BstDEI CTNAG 8 cut(s) 291, 330, 417, 740, 1308, 2133, 2460, 2660
BstDSI CCRYGG 4 cut(s) 129, 305, 1082, 1170
BstFNI CGCG 4 cut(s) 197, 307, 974, 1814
BstHHI GCGC 3 cut(s) 976, 1814, 2216
BstMAI GTCTC 3 cut(s) 1137, 2348, 2516
BstMCI CGRYCG 7 cut(s) 69, 557, 896, 1320, 1824, 2229, 2709
BstNI CCWGG 1 cut(s) 283
BstNSI RCATGY 2 cut(s) 205, 903
BstSCI CCNGG 2 cut(s) 29, 281
BstSFI CTRYAG 1 cut(s) 579
BstSLI GKGCMC 2 cut(s) 176, 710
BstUI CGCG 4 cut(s) 197, 307, 974, 1814
BstV1I GCAGC 1 cut(s) 1462
BstV2I GAAGAC 1 cut(s) 1707
BstX2I RGATCY 3 cut(s) 1361, 1565, 2737
BstYI RGATCY 3 cut(s) 1361, 1565, 2737
BstZ17I GTATAC 1 cut(s) 1617
BstZI CGGCCG 7 cut(s) 66, 554, 893, 1317, 1821, 2226, 2706
Bsu15I ATCGAT 1 cut(s) 816
BsuI GTATCC 1 cut(s) 861
BsuTUI ATCGAT 1 cut(s) 816
BtgI CCRYGG 4 cut(s) 129, 305, 1082, 1170
BtrI CACGTC 2 cut(s) 249, 1217
BtsI GCAGTG 2 cut(s) 816, 983
BtsIMutI CAGTG 6 cut(s) 176, 816, 983, 1316, 2397, 2871
Cac8I GCNNGC 9 cut(s) 144, 199, 203, 210, 457, 784, 1992, 2202, 2551
CciI TCATGA 2 cut(s) 883, 1434
CfoI GCGC 3 cut(s) 976, 1814, 2216
Cfr13I GGNCC 9 cut(s) 182, 276, 441, 506, 767, 842, 1464, 1505, 2266
Cfr42I CCGCGG 1 cut(s) 308
ClaI ATCGAT 1 cut(s) 816
CseI GACGC 1 cut(s) 1805
Csp6I GTAC 5 cut(s) 224, 960, 2100, 2435, 2572
CspCI CAANNNNNGTGG 4 cut(s) 1400, 1435, 2581, 2616
CviQI GTAC 5 cut(s) 224, 960, 2100, 2435, 2572
DdeI CTNAG 8 cut(s) 291, 330, 417, 740, 1308, 2133, 2460, 2660
EagI CGGCCG 7 cut(s) 66, 554, 893, 1317, 1821, 2226, 2706
Eam1104I CTCTTC 5 cut(s) 1332, 2124, 2307, 2783, 2859
EarI CTCTTC 5 cut(s) 1332, 2124, 2307, 2783, 2859
Ecl136II GAGCTC 1 cut(s) 889
EclXI CGGCCG 7 cut(s) 66, 554, 893, 1317, 1821, 2226, 2706
Eco130I CCWWGG 7 cut(s) 350, 763, 949, 1082, 1509, 2013, 2818
Eco147I AGGCCT 1 cut(s) 754
Eco24I GRGCYC 2 cut(s) 236, 891
Eco31I GGTCTC 1 cut(s) 1137
Eco47I GGWCC 4 cut(s) 276, 506, 1464, 2266
Eco52I CGGCCG 7 cut(s) 66, 554, 893, 1317, 1821, 2226, 2706
Eco53kI GAGCTC 1 cut(s) 889
Eco72I CACGTG 1 cut(s) 2039
Eco88I CYCGRG 2 cut(s) 23, 1140
EcoICRI GAGCTC 1 cut(s) 889
EcoO109I RGGNCCY 2 cut(s) 1464, 1505
EcoRI GAATTC 1 cut(s) 1663
EcoRII CCWGG 1 cut(s) 281
EcoT14I CCWWGG 7 cut(s) 350, 763, 949, 1082, 1509, 2013, 2818
EcoT38I GRGCYC 2 cut(s) 236, 891
ErhI CCWWGG 7 cut(s) 350, 763, 949, 1082, 1509, 2013, 2818
Esp3I CGTCTC 1 cut(s) 2348
FalI AAGNNNNNCTT 6 cut(s) 102, 134, 2738, 2770, 2838, 2870
FaqI GGGAC 4 cut(s) 492, 899, 1477, 2292
FauI CCCGC 3 cut(s) 190, 300, 2242
FauNDI CATATG 2 cut(s) 432, 1031
FbaI TGATCA 2 cut(s) 1387, 1891
FblI GTMKAC 3 cut(s) 1424, 1616, 2814
Fnu4HI GCNGC 9 cut(s) 185, 206, 453, 537, 651, 972, 1476, 1885, 2709
FriOI GRGCYC 2 cut(s) 236, 891
Fsp4HI GCNGC 9 cut(s) 185, 206, 453, 537, 651, 972, 1476, 1885, 2709
FspBI CTAG 9 cut(s) 227, 270, 618, 758, 1502, 2108, 2291, 2403, 2525
GlaI GCGC 3 cut(s) 975, 1813, 2215
GluI GCNGC 9 cut(s) 185, 206, 453, 537, 651, 972, 1476, 1885, 2709
GsaI CCCAGC 2 cut(s) 167, 1464
GsuI CTGGAG 2 cut(s) 304, 2594
HapII CCGG 5 cut(s) 30, 892, 1244, 1365, 1538
HgaI GACGC 1 cut(s) 1805
HhaI GCGC 3 cut(s) 976, 1814, 2216
Hin1I GRCGYC 1 cut(s) 1797
Hin6I GCGC 3 cut(s) 974, 1812, 2214
HinP1I GCGC 3 cut(s) 974, 1812, 2214
HincII GTYRAC 3 cut(s) 244, 1425, 2815
HindII GTYRAC 3 cut(s) 244, 1425, 2815
HindIII AAGCTT 1 cut(s) 1413
HinfI GANTC 6 cut(s) 427, 1111, 1817, 2087, 2305, 2758
HpaII CCGG 5 cut(s) 30, 892, 1244, 1365, 1538
HphI GGTGA 5 cut(s) 1040, 1805, 1961, 2264, 2734
Hpy99I CGWCG 1 cut(s) 11
HpyCH4III ACNGT 5 cut(s) 794, 1171, 2359, 2367, 2392
HpyCH4IV ACGT 6 cut(s) 248, 1216, 1471, 1597, 1763, 2038
HpyF3I CTNAG 8 cut(s) 291, 330, 417, 740, 1308, 2133, 2460, 2660
HpySE526I ACGT 6 cut(s) 248, 1216, 1471, 1597, 1763, 2038
Hsp92I GRCGYC 1 cut(s) 1797
HspAI GCGC 3 cut(s) 974, 1812, 2214
KflI GGGWCCC 1 cut(s) 1464
Ksp22I TGATCA 2 cut(s) 1387, 1891
KspI CCGCGG 1 cut(s) 308
LguI GCTCTTC 3 cut(s) 1332, 2124, 2859
LmnI GCTCC 4 cut(s) 358, 695, 894, 2221
Lsp1109I GCAGC 1 cut(s) 1462
LweI GCATC 5 cut(s) 91, 1729, 1986, 2023, 2805
MaeI CTAG 9 cut(s) 227, 270, 618, 758, 1502, 2108, 2291, 2403, 2525
MaeII ACGT 6 cut(s) 248, 1216, 1471, 1597, 1763, 2038
MaeIII GTNAC 7 cut(s) 1034, 1325, 1669, 1793, 2392, 2698, 2859
MflI RGATCY 3 cut(s) 1361, 1565, 2737
MhlI GDGCHC 4 cut(s) 176, 236, 710, 891
MlsI TGGCCA 3 cut(s) 212, 1734, 2604
MluNI TGGCCA 3 cut(s) 212, 1734, 2604
MlyI GAGTC 2 cut(s) 1811, 2314
Mox20I TGGCCA 3 cut(s) 212, 1734, 2604
MroXI GAANNNNTTC 1 cut(s) 2853
MscI TGGCCA 3 cut(s) 212, 1734, 2604
MseI TTAA 4 cut(s) 87, 1550, 2618, 2844
Msp20I TGGCCA 3 cut(s) 212, 1734, 2604
MspA1I CMGCKG 5 cut(s) 142, 163, 208, 307, 2249
MspI CCGG 5 cut(s) 30, 892, 1244, 1365, 1538
MspR9I CCNGG 2 cut(s) 31, 283
MvaI CCWGG 1 cut(s) 283
MvnI CGCG 4 cut(s) 197, 307, 974, 1814
NciI CCSGG 1 cut(s) 31
NcoI CCATGG 1 cut(s) 1082
NdeI CATATG 2 cut(s) 432, 1031
NlaIV GGNNCC 9 cut(s) 183, 348, 443, 508, 1168, 1465, 1466, 1507, 1567
NmeAIII GCCGAG 5 cut(s) 94, 1067, 1799, 2069, 2254
NmuCI GTSAC 5 cut(s) 1669, 1793, 2392, 2698, 2859
NspI RCATGY 2 cut(s) 205, 903
PaeI GCATGC 1 cut(s) 205
PaeR7I CTCGAG 2 cut(s) 23, 1140
PagI TCATGA 2 cut(s) 883, 1434
PceI AGGCCT 1 cut(s) 754
PciI ACATGT 1 cut(s) 899
PciSI GCTCTTC 3 cut(s) 1332, 2124, 2859
PcsI WCGNNNNNNNCGW 1 cut(s) 790
PdmI GAANNNNTTC 1 cut(s) 2853
PfeI GAWTC 4 cut(s) 427, 1111, 2087, 2758
PflFI GACNNNGTC 1 cut(s) 1009
PkrI GCNGC 9 cut(s) 186, 207, 454, 538, 652, 973, 1477, 1886, 2710
PleI GAGTC 2 cut(s) 1811, 2313
PmaCI CACGTG 1 cut(s) 2039
PmlI CACGTG 1 cut(s) 2039
PpsI GAGTC 2 cut(s) 1811, 2313
Ppu21I YACGTR 1 cut(s) 2039
PpuMI RGGWCCY 1 cut(s) 1464
PscI ACATGT 1 cut(s) 899
Psp124BI GAGCTC 1 cut(s) 891
Psp5II RGGWCCY 1 cut(s) 1464
Psp6I CCWGG 1 cut(s) 281
PspCI CACGTG 1 cut(s) 2039
PspFI CCCAGC 2 cut(s) 163, 1460
PspGI CCWGG 1 cut(s) 281
PspN4I GGNNCC 9 cut(s) 183, 348, 443, 508, 1168, 1465, 1466, 1507, 1567
PspPI GGNCC 9 cut(s) 182, 276, 441, 506, 767, 842, 1464, 1505, 2266
PspPPI RGGWCCY 1 cut(s) 1464
PspXI VCTCGAGB 1 cut(s) 23
PsuI RGATCY 3 cut(s) 1361, 1565, 2737
PsyI GACNNNGTC 1 cut(s) 1009
PvuII CAGCTG 1 cut(s) 142
RsaI GTAC 5 cut(s) 225, 961, 2101, 2436, 2573
RsaNI GTAC 5 cut(s) 224, 960, 2100, 2435, 2572
SacI GAGCTC 1 cut(s) 891
SacII CCGCGG 1 cut(s) 308
SalI GTCGAC 2 cut(s) 1423, 2813
SapI GCTCTTC 3 cut(s) 1332, 2124, 2859
SaqAI TTAA 4 cut(s) 87, 1550, 2618, 2844
SatI GCNGC 9 cut(s) 185, 206, 453, 537, 651, 972, 1476, 1885, 2709
Sau96I GGNCC 9 cut(s) 182, 276, 441, 506, 767, 842, 1464, 1505, 2266
ScaI AGTACT 1 cut(s) 2436
SchI GAGTC 2 cut(s) 1811, 2314
ScrFI CCNGG 2 cut(s) 31, 283
SduI GDGCHC 4 cut(s) 176, 236, 710, 891
SfaNI GCATC 5 cut(s) 91, 1729, 1986, 2023, 2805
SfcI CTRYAG 1 cut(s) 579
Sfr274I CTCGAG 2 cut(s) 23, 1140
Sfr303I CCGCGG 1 cut(s) 308
SgrBI CCGCGG 1 cut(s) 308
SinI GGWCC 4 cut(s) 276, 506, 1464, 2266
SlaI CTCGAG 2 cut(s) 23, 1140
SmlI CTYRAG 4 cut(s) 23, 1061, 1140, 2351
SmoI CTYRAG 4 cut(s) 23, 1061, 1140, 2351
SphI GCATGC 1 cut(s) 205
SseBI AGGCCT 1 cut(s) 754
SspI AATATT 1 cut(s) 543
SspMI CTAG 9 cut(s) 227, 270, 618, 758, 1502, 2108, 2291, 2403, 2525
SstI GAGCTC 1 cut(s) 891
StuI AGGCCT 1 cut(s) 754
StyD4I CCNGG 2 cut(s) 29, 281
StyI CCWWGG 7 cut(s) 350, 763, 949, 1082, 1509, 2013, 2818
TaaI ACNGT 5 cut(s) 794, 1171, 2359, 2367, 2392
TaiI ACGT 6 cut(s) 251, 1219, 1474, 1600, 1766, 2041
TaqI TCGA 9 cut(s) 24, 816, 1141, 1424, 1589, 1802, 1973, 2092, 2814
TaqII GACCGA 5 cut(s) 494, 1657, 2411, 2758, 2847
TatI WGTACW 2 cut(s) 2099, 2434
TauI GCSGC 8 cut(s) 187, 208, 455, 539, 653, 974, 1887, 2711
TfiI GAWTC 4 cut(s) 427, 1111, 2087, 2758
Tru1I TTAA 4 cut(s) 87, 1550, 2618, 2844
Tru9I TTAA 4 cut(s) 87, 1550, 2618, 2844
TscAI CASTG 6 cut(s) 183, 816, 983, 1316, 2397, 2878
TseFI GTSAC 5 cut(s) 1669, 1793, 2392, 2698, 2859
TseI GCWGC 1 cut(s) 1475
Tsp45I GTSAC 5 cut(s) 1669, 1793, 2392, 2698, 2859
TspGWI ACGGA 1 cut(s) 118
TspRI CASTG 6 cut(s) 183, 816, 983, 1316, 2397, 2878
Tth111I GACNNNGTC 1 cut(s) 1009
VneI GTGCAC 2 cut(s) 172, 706
VpaK11BI GGWCC 4 cut(s) 276, 506, 1464, 2266
XapI RAATTY 9 cut(s) 61, 83, 124, 587, 716, 826, 1094, 1663, 2503
XbaI TCTAGA 2 cut(s) 2290, 2524
XceI RCATGY 2 cut(s) 205, 903
XhoI CTCGAG 2 cut(s) 23, 1140
XmiI GTMKAC 3 cut(s) 1424, 1616, 2814
XmnI GAANNNNTTC 1 cut(s) 2853
XspI CTAG 9 cut(s) 227, 270, 618, 758, 1502, 2108, 2291, 2403, 2525
ZrmI AGTACT 1 cut(s) 2436
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.