Rroxscaffold_4G00319060

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000063
Physical Location & Seq
Forward (+)
46544954 .. 46546554
1601 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00319060.1

Sequence Viewer

Length: 732 bp
ATGATGTCGACAACCGTGGAGGATTCAACTGGGACTGCAGAGGATCGATCCGACACCGGCGAGTTTCGAGGCGGGTCACCGGTCGAATCGGGGTCGGCGGGCTGCAGAGTGGGTTGTTGCGGCACGGATGGCCATATTGATCACTCTTTGCCTCCTTATGAGAGTTCCATGGTTGAGATTGACATGGATGTAAGCCTCCCACATTCCCTTCCTTGGATTTCATTGCTTGCTTGGTCGAGATTGTTGACTCTTTCTTTTTACGGATTCGCCGATTTGGGCGGGACTCATCTTCCTAATACCTCGGGCATCGGCCAACAACTTACGGTCTCAACCAACTGTTCCAAGGAAACCGAAGATATCAATGTTCTCGGCCAAGAAGTTGTGTTTAACCATCACCCACTTGTTAGAGAATCTCGCGGTAGTACGACCACGGAGTTGGCTCTTCTCAACCAAACTAAAGCAAATCCCCCTATGTTCGGAACGCTCACTTCTCTTCCTATCGAAGGGATGTCCACAAACCGTACGTCGGGCGATCTCGGTTTAGAGCTACTTCAATTTCTAGATGCTTTAGACCACACCGTGAGCCCCGTAGAGGAAAAGCATTTCTCTCGTGTAGAGGCTTATGAGGTTCATGCTCGTTCGACCGTTATTCGTAAACCGAAGACTTCTTTGGTTGTGGGGAAGCATAAGGTGAATGTTCTAAAGGTGAAGATGGATGATCTAAAGGGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

243

Amino Acids

26.3

Weight (kDa)

5.31

Isoelectric Point (pI)

38.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000063)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21382 FvH4_1g29794 FvH4_1g29795 FvH4_2g35573 FvH4_2g35574 FvH4_4g18552 FvH4_5g16044
malus_domestica MD05G1017000.v1.1
prunus_persica Prupe.3G140800_v2.0.a1 Prupe.6G164100_v2.0.a1
pyrus_communis pycom01g04330 pycom03g19820 pycom04g06720 pycom06g11360 pycom06g19000 pycom10g08100 pycom13g16660 pycom13g27590 pycom13g27640 pycom13g27890 pycom16g11770 pycom16g19530
rosa_chinensis RchiOBHm_Chr1g0317341 RchiOBHm_Chr1g0317351 RchiOBHm_Chr1g0320431 RchiOBHm_Chr1g0320711 RchiOBHm_Chr1g0320721 RchiOBHm_Chr1g0321611 RchiOBHm_Chr1g0321621 RchiOBHm_Chr1g0321631 RchiOBHm_Chr1g0323651 RchiOBHm_Chr1g0332991 RchiOBHm_Chr1g0333001 RchiOBHm_Chr1g0335981 RchiOBHm_Chr1g0335991 RchiOBHm_Chr1g0336001 RchiOBHm_Chr1g0350201 RchiOBHm_Chr1g0368201 RchiOBHm_Chr2g0105531 RchiOBHm_Chr2g0105541 RchiOBHm_Chr2g0116571 RchiOBHm_Chr2g0116581 RchiOBHm_Chr2g0121071 RchiOBHm_Chr2g0131351 RchiOBHm_Chr2g0131661 RchiOBHm_Chr2g0133021 RchiOBHm_Chr2g0138181 RchiOBHm_Chr2g0138191 RchiOBHm_Chr2g0142701 RchiOBHm_Chr2g0142711 RchiOBHm_Chr2g0152981 RchiOBHm_Chr3g0456181 RchiOBHm_Chr3g0456191 RchiOBHm_Chr3g0493631 RchiOBHm_Chr3g0496201 RchiOBHm_Chr4g0401541 RchiOBHm_Chr4g0410311 RchiOBHm_Chr4g0410321 RchiOBHm_Chr4g0419231 RchiOBHm_Chr4g0419511 RchiOBHm_Chr4g0419521 RchiOBHm_Chr5g0004311 RchiOBHm_Chr5g0004321 RchiOBHm_Chr5g0038131 RchiOBHm_Chr5g0038251 RchiOBHm_Chr5g0038261 RchiOBHm_Chr5g0038271 RchiOBHm_Chr5g0052241 RchiOBHm_Chr5g0053911 RchiOBHm_Chr5g0074641 RchiOBHm_Chr5g0076651 RchiOBHm_Chr5g0076661 RchiOBHm_Chr6g0249161 RchiOBHm_Chr6g0249171 RchiOBHm_Chr6g0250961 RchiOBHm_Chr6g0253701 RchiOBHm_Chr6g0262131 RchiOBHm_Chr6g0263181 RchiOBHm_Chr6g0263231 RchiOBHm_Chr6g0263241 RchiOBHm_Chr6g0263251 RchiOBHm_Chr6g0291271 RchiOBHm_Chr7g0194611 RchiOBHm_Chr7g0219691 RchiOBHm_Chr7g0219701 RchiOBHm_Chr7g0225431 RchiOBHm_Chr7g0234221 RchiOBHm_Chr7g0238711 RchiOBHm_Chr7g0238721 RchiOBHm_Chr7g0238731 RchiOBHm_Chr7g0239611 RchiOBHm_Chr7g0239621
rosa_laevigata RLG00000001361 RLG00000001376 RLG00000001860 RLG00000002051 RLG00000002362 RLG00000008940 RLG00000012764 RLG00000018782 RLG00000029639 RLG00000030151
rosa_multiflora Rmu_co8090794.1_g000001 Rmu_co8135356.1_g000001 Rmu_co8224968.1_g000001 Rmu_sc0000016.1_g000020 Rmu_sc0000029.1_g000061 Rmu_sc0000035.1_g000032 Rmu_sc0000060.1_g000041 Rmu_sc0000148.1_g000041 Rmu_sc0000315.1_g000084 Rmu_sc0000527.1_g000005 Rmu_sc0000527.1_g000007 Rmu_sc0000527.1_g000008 Rmu_sc0000648.1_g000002 Rmu_sc0000762.1_g000076 Rmu_sc0000870.1_g000003 Rmu_sc0000870.1_g000004 Rmu_sc0000948.1_g000037 Rmu_sc0000997.1_g000003 Rmu_sc0001047.1_g000041 Rmu_sc0001047.1_g000042 Rmu_sc0001075.1_g000044 Rmu_sc0001174.1_g000006 Rmu_sc0001235.1_g000025 Rmu_sc0001292.1_g000008 Rmu_sc0001301.1_g000038 Rmu_sc0001461.1_g000069 Rmu_sc0001461.1_g000070 Rmu_sc0001669.1_g000041 Rmu_sc0001689.1_g000027 Rmu_sc0001896.1_g000008 Rmu_sc0001909.1_g000013 Rmu_sc0002170.1_g000038 Rmu_sc0002200.1_g000014 Rmu_sc0002283.1_g000027 Rmu_sc0002284.1_g000014 Rmu_sc0002294.1_g000017 Rmu_sc0002294.1_g000018 Rmu_sc0002307.1_g000020 Rmu_sc0002307.1_g000021 Rmu_sc0002307.1_g000023 Rmu_sc0002357.1_g000054 Rmu_sc0002409.1_g000005 Rmu_sc0002535.1_g000002 Rmu_sc0002589.1_g000014 Rmu_sc0002759.1_g000016 Rmu_sc0002759.1_g000017 Rmu_sc0002777.1_g000015 Rmu_sc0002824.1_g000016 Rmu_sc0002872.1_g000005 Rmu_sc0002872.1_g000012 Rmu_sc0002872.1_g000013 Rmu_sc0002942.1_g000019 Rmu_sc0003337.1_g000001 Rmu_sc0003410.1_g000052 Rmu_sc0003445.1_g000010 Rmu_sc0003773.1_g000007 Rmu_sc0003773.1_g000008 Rmu_sc0003895.1_g000002 Rmu_sc0004063.1_g000006 Rmu_sc0004088.1_g000009 Rmu_sc0004088.1_g000010 Rmu_sc0004174.1_g000027 Rmu_sc0004196.1_g000010 Rmu_sc0004515.1_g000006 Rmu_sc0004727.1_g000010 Rmu_sc0004755.1_g000018 Rmu_sc0005016.1_g000030 Rmu_sc0005026.1_g000001 Rmu_sc0005044.1_g000007 Rmu_sc0005284.1_g000001 Rmu_sc0005431.1_g000030 Rmu_sc0005802.1_g000014 Rmu_sc0005802.1_g000015 Rmu_sc0005994.1_g000004 Rmu_sc0005994.1_g000005 Rmu_sc0006059.1_g000048 Rmu_sc0006583.1_g000013 Rmu_sc0006824.1_g000009 Rmu_sc0007458.1_g000005 Rmu_sc0007707.1_g000002 Rmu_sc0008242.1_g000012 Rmu_sc0008713.1_g000006 Rmu_sc0008770.1_g000008 Rmu_sc0009785.1_g000004 Rmu_sc0009785.1_g000005 Rmu_sc0010125.1_g000001 Rmu_sc0010211.1_g000004 Rmu_sc0011034.1_g000001 Rmu_sc0011833.1_g000006 Rmu_sc0014851.1_g000001 Rmu_sc0014899.1_g000001 Rmu_sc0015060.1_g000003 Rmu_sc0015186.1_g000001 Rmu_sc0015248.1_g000003 Rmu_sc0015248.1_g000004 Rmu_sc0015314.1_g000001 Rmu_sc0018098.1_g000002 Rmu_sc0022706.1_g000004 Rmu_sc0023350.1_g000002 Rmu_sc0027636.1_g000001 Rmu_sc0027672.1_g000003 Rmu_sc0030879.1_g000001 Rmu_ssc0000008.1_g000029 Rmu_ssc0000019.1_g000014 Rmu_ssc0000050.1_g000082 Rmu_ssc0000282.1_g000004 Rmu_ssc0000311.1_g000010
rosa_roxburghii Rroxscaffold_1G00015190 Rroxscaffold_1G00031880 Rroxscaffold_1G00031890 Rroxscaffold_1G00059310 Rroxscaffold_1G00060420 Rroxscaffold_1G00067930 Rroxscaffold_1G00075030 Rroxscaffold_2G00082210 Rroxscaffold_2G00122970 Rroxscaffold_3G00218230 Rroxscaffold_3G00219020 Rroxscaffold_3G00219030 Rroxscaffold_3G00223680 Rroxscaffold_3G00223690 Rroxscaffold_3G00223700 Rroxscaffold_3G00226870 Rroxscaffold_3G00226880 Rroxscaffold_3G00232990 Rroxscaffold_3G00265610 Rroxscaffold_3G00265620 Rroxscaffold_3G00265630 Rroxscaffold_4G00318660 Rroxscaffold_4G00319060 Rroxscaffold_4G00323500 Rroxscaffold_5G00357520 Rroxscaffold_5G00366150 Rroxscaffold_5G00377470 Rroxscaffold_6G00395700 Rroxscaffold_6G00413950 Rroxscaffold_7G00187650 Rroxscaffold_7G00198290 Rroxscaffold_7G00198300 Rroxscaffold_7G00208060
rosa_rugosa Rorug01G0173900 Rorug01G0174000 Rorug01G0174100 Rorug01G0174100 Rorug02G0341200 Rorug04G0135700 Rorug04G0135800 Rorug05G0032500 Rorug06G0021800
rosa_samantha Rh1AG036600 Rh1AG245800 Rh1CG021700 Rh1CG021800 Rh1CG085800 Rh1CG085900 Rh1CG187900 Rh1CG229600 Rh1CG239600 Rh1CG246500 Rh1CG246600 Rh2BG478100 Rh2DG341300 Rh2DG366600 Rh2DG375700 Rh2DG384300 Rh2DG487000 Rh2DG504000 Rh2DG504100 Rh3AG311800 Rh3AG327500 Rh3AG328300 Rh3BG345100 Rh3CG320100 Rh4AG005700 Rh4AG067900 Rh4AG068000 Rh4AG084400 Rh4AG106700 Rh4AG160000 Rh4AG173900 Rh4AG174000 Rh4CG125300 Rh4CG125500 Rh4CG264500 Rh4DG110800 Rh5AG047300 Rh5AG085200 Rh5AG126300 Rh5AG127300 Rh5AG203000 Rh5AG332400 Rh5AG332500 Rh5AG342400 Rh5AG344100 Rh5AG375600 Rh5AG378300 Rh5AG386000 Rh5AG529600 Rh5BG125200 Rh5CG137600 Rh5CG137700 Rh5DG125200 Rh6BG134100 Rh6BG175400 Rh6BG179500 Rh6BG179600 Rh6BG181600 Rh6BG181700 Rh6BG191100 Rh6BG232900 Rh6BG259700 Rh6BG259800 Rh7AG028000 Rh7AG319400 Rh7AG352700 Rh7AG352800 Rh7AG352900 Rh7AG482500 Rh7AG482600 Rh7AG503800 Rh7BG334700 Rh7CG200100 Rh7CG336200 Rh7CG370200 Rh7CG370400 Rh7CG370500
rosa_wichuraiana Rw1G001580 Rw1G003570 Rw1G004260 Rw1G004270 Rw1G021170 Rw2G019390 Rw2G040280 Rw2G044050 Rw4G004430 Rw5G010950 Rw5G018350 Rw5G032890 Rw6G002840 Rw6G006510 Rw6G007780 Rw6G033790 Rw7G036320 Rw7G040550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 8
AccII CGCG 1 cut(s) 417
AciI CCGC 5 cut(s) 72, 98, 120, 279, 417
AclWI GGATC 2 cut(s) 42, 51
AcoI YGGCCR 3 cut(s) 130, 310, 370
AdeI CACNNNGTG 1 cut(s) 580
AfaI GTAC 2 cut(s) 424, 523
AfiI CCNNNNNNNGG 5 cut(s) 213, 476, 503, 526, 592
AgeI ACCGGT 1 cut(s) 79
AgsI TTSAA 2 cut(s) 27, 554
AjuI GAANNNNNNNTTGG 2 cut(s) 653, 685
AluBI AGCT 1 cut(s) 547
AluI AGCT 1 cut(s) 547
Alw26I GTCTC 1 cut(s) 331
AlwI GGATC 2 cut(s) 42, 51
Ama87I CYCGRG 1 cut(s) 301
AoxI GGCC 3 cut(s) 130, 310, 370
ApeKI GCWGC 1 cut(s) 102
ArsI GACNNNNNNTTYG 2 cut(s) 509, 541
AsiGI ACCGGT 1 cut(s) 79
AsuHPI GGTGA 4 cut(s) 69, 386, 703, 718
AvaI CYCGRG 1 cut(s) 301
BalI TGGCCA 1 cut(s) 132
BanII GRGCYC 1 cut(s) 587
BauI CACGAG 1 cut(s) 609
BbsI GAAGAC 1 cut(s) 668
BbvI GCAGC 1 cut(s) 89
BccI CCATC 3 cut(s) 122, 399, 706
BcgI CGANNNNNNTGC 2 cut(s) 590, 624
BclI TGATCA 1 cut(s) 139
BcoDI GTCTC 1 cut(s) 331
BfaI CTAG 1 cut(s) 560
BfmI CTRYAG 2 cut(s) 36, 103
BisI GCNGC 2 cut(s) 103, 121
BlsI GCNGC 2 cut(s) 104, 122
BmeT110I CYCGRG 1 cut(s) 301
BmrI ACTGGG 1 cut(s) 39
BmsI GCATC 2 cut(s) 315, 553
BmuI ACTGGG 1 cut(s) 39
BpiI GAAGAC 1 cut(s) 668
Bsa29I ATCGAT 1 cut(s) 46
BsaI GGTCTC 1 cut(s) 331
BsaJI CCNNGG 6 cut(s) 15, 168, 212, 300, 342, 429
BsaWI WCCGGW 1 cut(s) 79
Bsc4I CCNNNNNNNGG 5 cut(s) 213, 476, 503, 526, 592
Bse118I RCCGGY 2 cut(s) 56, 79
Bse1I ACTGG 1 cut(s) 34
Bse3DI GCAATG 1 cut(s) 221
BseCI ATCGAT 1 cut(s) 46
BseDI CCNNGG 6 cut(s) 15, 168, 212, 300, 342, 429
BseGI GGATG 4 cut(s) 133, 193, 513, 721
BseLI CCNNNNNNNGG 5 cut(s) 213, 476, 503, 526, 592
BseMI GCAATG 1 cut(s) 221
BseNI ACTGG 1 cut(s) 34
BseXI GCAGC 1 cut(s) 89
Bsh1236I CGCG 1 cut(s) 417
Bsh1285I CGRYCG 2 cut(s) 84, 645
BshFI GGCC 3 cut(s) 132, 312, 372
BshTI ACCGGT 1 cut(s) 79
BshVI ATCGAT 1 cut(s) 46
BsiEI CGRYCG 2 cut(s) 84, 645
BsiHKCI CYCGRG 1 cut(s) 301
BsiSI CCGG 2 cut(s) 57, 80
BsiWI CGTACG 1 cut(s) 521
BslFI GGGAC 2 cut(s) 46, 295
BslI CCNNNNNNNGG 5 cut(s) 213, 476, 503, 526, 592
BsmAI GTCTC 1 cut(s) 331
BsmFI GGGAC 2 cut(s) 46, 295
BsnI GGCC 3 cut(s) 132, 312, 372
Bso31I GGTCTC 1 cut(s) 331
BsoBI CYCGRG 1 cut(s) 301
Bsp1286I GDGCHC 1 cut(s) 587
Bsp143I GATC 5 cut(s) 43, 47, 139, 532, 718
Bsp19I CCATGG 1 cut(s) 168
BspACI CCGC 5 cut(s) 72, 98, 120, 279, 417
BspANI GGCC 3 cut(s) 132, 312, 372
BspDI ATCGAT 1 cut(s) 46
BspFNI CGCG 1 cut(s) 417
BspMAI CTGCAG 2 cut(s) 40, 107
BspPI GGATC 2 cut(s) 42, 51
BspQI GCTCTTC 1 cut(s) 447
BspTNI GGTCTC 1 cut(s) 331
BsrDI GCAATG 1 cut(s) 221
BsrFI RCCGGY 2 cut(s) 56, 79
BsrI ACTGG 1 cut(s) 34
BssAI RCCGGY 2 cut(s) 56, 79
BssECI CCNNGG 6 cut(s) 15, 168, 212, 300, 342, 429
BssMI GATC 5 cut(s) 43, 47, 139, 532, 718
BssSI CACGAG 1 cut(s) 609
BssT1I CCWWGG 3 cut(s) 168, 212, 342
Bst2BI CACGAG 1 cut(s) 609
Bst4CI ACNGT 6 cut(s) 16, 325, 338, 521, 580, 646
Bst6I CTCTTC 2 cut(s) 447, 498
BstC8I GCNNGC 2 cut(s) 100, 228
BstDSI CCRYGG 3 cut(s) 15, 168, 429
BstEII GGTNACC 1 cut(s) 75
BstENI CCTNNNNNAGG 1 cut(s) 501
BstF5I GGATG 4 cut(s) 133, 193, 513, 721
BstFNI CGCG 1 cut(s) 417
BstKTI GATC 5 cut(s) 46, 50, 142, 535, 721
BstMAI GTCTC 1 cut(s) 331
BstMBI GATC 5 cut(s) 43, 47, 139, 532, 718
BstMCI CGRYCG 2 cut(s) 84, 645
BstMWI GCNNNNNNNGC 1 cut(s) 129
BstPI GGTNACC 1 cut(s) 75
BstSFI CTRYAG 2 cut(s) 36, 103
BstUI CGCG 1 cut(s) 417
BstV1I GCAGC 1 cut(s) 89
BstV2I GAAGAC 1 cut(s) 668
BstXI CCANNNNNNTGG 1 cut(s) 436
Bsu15I ATCGAT 1 cut(s) 46
BsuRI GGCC 3 cut(s) 132, 312, 372
BsuTUI ATCGAT 1 cut(s) 46
BtgI CCRYGG 3 cut(s) 15, 168, 429
BtsCI GGATG 4 cut(s) 133, 193, 513, 721
Cac8I GCNNGC 2 cut(s) 100, 228
Cfr10I RCCGGY 2 cut(s) 56, 79
ClaI ATCGAT 1 cut(s) 46
Csp6I GTAC 2 cut(s) 423, 522
CspAI ACCGGT 1 cut(s) 79
CviAII CATG 3 cut(s) 169, 184, 632
CviJI RGCY 9 cut(s) 102, 132, 195, 312, 372, 440, 547, 585, 620
CviKI_1 RGCY 9 cut(s) 102, 132, 195, 312, 372, 440, 547, 585, 620
CviQI GTAC 2 cut(s) 423, 522
DpnI GATC 5 cut(s) 45, 49, 141, 534, 720
DpnII GATC 5 cut(s) 43, 47, 139, 532, 718
DraIII CACNNNGTG 1 cut(s) 580
EaeI YGGCCR 3 cut(s) 130, 310, 370
Eam1104I CTCTTC 2 cut(s) 447, 498
EarI CTCTTC 2 cut(s) 447, 498
Eco130I CCWWGG 3 cut(s) 168, 212, 342
Eco24I GRGCYC 1 cut(s) 587
Eco31I GGTCTC 1 cut(s) 331
Eco32I GATATC 1 cut(s) 358
Eco88I CYCGRG 1 cut(s) 301
Eco91I GGTNACC 1 cut(s) 75
EcoNI CCTNNNNNAGG 1 cut(s) 501
EcoO65I GGTNACC 1 cut(s) 75
EcoRV GATATC 1 cut(s) 358
EcoT14I CCWWGG 3 cut(s) 168, 212, 342
EcoT38I GRGCYC 1 cut(s) 587
ErhI CCWWGG 3 cut(s) 168, 212, 342
FaeI CATG 3 cut(s) 172, 187, 635
FaiI YATR 8 cut(s) 135, 159, 170, 185, 473, 624, 633, 687
FaqI GGGAC 2 cut(s) 46, 295
FatI CATG 3 cut(s) 168, 183, 631
FauI CCCGC 3 cut(s) 65, 91, 272
FbaI TGATCA 1 cut(s) 139
FblI GTMKAC 1 cut(s) 8
Fnu4HI GCNGC 2 cut(s) 103, 121
FokI GGATG 4 cut(s) 140, 200, 520, 728
FriOI GRGCYC 1 cut(s) 587
Fsp4HI GCNGC 2 cut(s) 103, 121
FspBI CTAG 1 cut(s) 560
GluI GCNGC 2 cut(s) 103, 121
HaeIII GGCC 3 cut(s) 132, 312, 372
HapII CCGG 2 cut(s) 57, 80
Hin1II CATG 3 cut(s) 172, 187, 635
HincII GTYRAC 2 cut(s) 9, 246
HindII GTYRAC 2 cut(s) 9, 246
HinfI GANTC 6 cut(s) 23, 86, 247, 264, 283, 410
HpaII CCGG 2 cut(s) 57, 80
HphI GGTGA 4 cut(s) 69, 386, 703, 718
Hpy166II GTNNAC 4 cut(s) 9, 246, 513, 656
Hpy188I TCNGA 2 cut(s) 52, 479
Hpy188III TCNNGA 2 cut(s) 237, 560
Hpy8I GTNNAC 4 cut(s) 9, 246, 513, 656
Hpy99I CGWCG 1 cut(s) 529
HpyAV CCTTC 2 cut(s) 218, 497
HpyCH4III ACNGT 6 cut(s) 16, 325, 338, 521, 580, 646
HpyCH4IV ACGT 1 cut(s) 524
HpyCH4V TGCA 2 cut(s) 38, 105
HpyF10VI GCNNNNNNNGC 1 cut(s) 129
HpySE526I ACGT 1 cut(s) 524
Hsp92II CATG 3 cut(s) 172, 187, 635
Ksp22I TGATCA 1 cut(s) 139
Kzo9I GATC 5 cut(s) 43, 47, 139, 532, 718
LguI GCTCTTC 1 cut(s) 447
LpnPI CCDG 3 cut(s) 15, 70, 93
Lsp1109I GCAGC 1 cut(s) 89
LweI GCATC 2 cut(s) 315, 553
MaeI CTAG 1 cut(s) 560
MaeII ACGT 1 cut(s) 524
MaeIII GTNAC 1 cut(s) 75
MalI GATC 5 cut(s) 45, 49, 141, 534, 720
MboI GATC 5 cut(s) 43, 47, 139, 532, 718
MboII GAAGA 6 cut(s) 281, 365, 434, 485, 673, 721
MhlI GDGCHC 1 cut(s) 587
MlsI TGGCCA 1 cut(s) 132
MluCI AATT 1 cut(s) 554
MluNI TGGCCA 1 cut(s) 132
MlyI GAGTC 2 cut(s) 241, 277
MmeI TCCRAC 1 cut(s) 75
MnlI CCTC 9 cut(s) 13, 34, 62, 162, 206, 310, 586, 610, 619
Mox20I TGGCCA 1 cut(s) 132
MscI TGGCCA 1 cut(s) 132
MseI TTAA 1 cut(s) 387
Msp20I TGGCCA 1 cut(s) 132
MspI CCGG 2 cut(s) 57, 80
MvnI CGCG 1 cut(s) 417
MwoI GCNNNNNNNGC 1 cut(s) 129
NcoI CCATGG 1 cut(s) 168
NdeII GATC 5 cut(s) 43, 47, 139, 532, 718
NlaIII CATG 3 cut(s) 172, 187, 635
NmeAIII GCCGAG 1 cut(s) 348
NmuCI GTSAC 1 cut(s) 75
PciSI GCTCTTC 1 cut(s) 447
PcsI WCGNNNNNNNCGW 1 cut(s) 267
PfeI GAWTC 4 cut(s) 23, 86, 264, 410
Pfl23II CGTACG 1 cut(s) 521
PinAI ACCGGT 1 cut(s) 79
PkrI GCNGC 2 cut(s) 104, 122
PleI GAGTC 2 cut(s) 241, 277
PpsI GAGTC 2 cut(s) 241, 277
PspEI GGTNACC 1 cut(s) 75
PspLI CGTACG 1 cut(s) 521
PstI CTGCAG 2 cut(s) 40, 107
RsaI GTAC 2 cut(s) 424, 523
RsaNI GTAC 2 cut(s) 423, 522
SalI GTCGAC 1 cut(s) 7
SapI GCTCTTC 1 cut(s) 447
SaqAI TTAA 1 cut(s) 387
SatI GCNGC 2 cut(s) 103, 121
Sau3AI GATC 5 cut(s) 43, 47, 139, 532, 718
SchI GAGTC 2 cut(s) 241, 277
SduI GDGCHC 1 cut(s) 587
SetI ASST 6 cut(s) 302, 527, 549, 630, 693, 708
SfaNI GCATC 2 cut(s) 315, 553
SfcI CTRYAG 2 cut(s) 36, 103
SgrAI CRCCGGYG 1 cut(s) 56
Sse9I AATT 1 cut(s) 554
SsiI CCGC 5 cut(s) 72, 98, 120, 279, 417
SspMI CTAG 1 cut(s) 560
StyI CCWWGG 3 cut(s) 168, 212, 342
TaaI ACNGT 6 cut(s) 16, 325, 338, 521, 580, 646
TaiI ACGT 1 cut(s) 527
TaqI TCGA 7 cut(s) 8, 46, 67, 84, 236, 501, 641
TasI AATT 1 cut(s) 554
TauI GCSGC 1 cut(s) 123
TfiI GAWTC 4 cut(s) 23, 86, 264, 410
Tru1I TTAA 1 cut(s) 387
Tru9I TTAA 1 cut(s) 387
TseFI GTSAC 1 cut(s) 75
TseI GCWGC 1 cut(s) 102
Tsp45I GTSAC 1 cut(s) 75
TspDTI ATGAA 2 cut(s) 210, 620
TspGWI ACGGA 3 cut(s) 140, 276, 446
XagI CCTNNNNNAGG 1 cut(s) 501
XbaI TCTAGA 1 cut(s) 559
XmiI GTMKAC 1 cut(s) 8
XspI CTAG 1 cut(s) 560
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.