dipeptidyl-peptidase activity
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PMD | PF10536 | 131 - 513 | 2.2e-42 | Plant mobile domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 504 |
| Acc65I | GGTACC | 1 cut(s) | 346 |
| AccB1I | GGYRCC | 1 cut(s) | 346 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2926 |
| AccBSI | CCGCTC | 1 cut(s) | 375 |
| AccI | GTMKAC | 2 cut(s) | 2693, 2916 |
| AccII | CGCG | 3 cut(s) | 163, 1424, 1766 |
| AccIII | TCCGGA | 1 cut(s) | 2255 |
| AclWI | GGATC | 3 cut(s) | 444, 1473, 2349 |
| AcsI | RAATTY | 3 cut(s) | 71, 292, 2605 |
| AcuI | CTGAAG | 2 cut(s) | 2301, 2805 |
| AcyI | GRCGYC | 1 cut(s) | 663 |
| AfaI | GTAC | 8 cut(s) | 348, 916, 1227, 1285, 2139, 2184, 2538, 2882 |
| AfeI | AGCGCT | 1 cut(s) | 1492 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 672, 865, 985, 2116, 2186, 2326, 2416, 2926 |
| AflIII | ACRYGT | 1 cut(s) | 801 |
| AhlI | ACTAGT | 1 cut(s) | 1901 |
| AjnI | CCWGG | 3 cut(s) | 304, 978, 1297 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 2714, 2746, 2756, 2788 |
| AleI | CACNNNNGTG | 1 cut(s) | 331 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2812, 2844 |
| Alw21I | GWGCWC | 3 cut(s) | 768, 1732, 1983 |
| Alw26I | GTCTC | 5 cut(s) | 20, 610, 1254, 1280, 2618 |
| AlwI | GGATC | 3 cut(s) | 444, 1473, 2349 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 23 |
| Ama87I | CYCGRG | 4 cut(s) | 329, 503, 1257, 1609 |
| Aor13HI | TCCGGA | 1 cut(s) | 2255 |
| Aor51HI | AGCGCT | 1 cut(s) | 1492 |
| ApeKI | GCWGC | 3 cut(s) | 92, 452, 455 |
| ApoI | RAATTY | 3 cut(s) | 71, 292, 2605 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1805, 1837 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 386, 2955 |
| Asp718I | GGTACC | 1 cut(s) | 346 |
| AspLEI | GCGC | 2 cut(s) | 1426, 1493 |
| AspS9I | GGNCC | 7 cut(s) | 182, 223, 506, 856, 887, 962, 1070 |
| AsuC2I | CCSGG | 3 cut(s) | 1381, 2180, 2411 |
| AsuHPI | GGTGA | 5 cut(s) | 943, 1612, 1749, 1841, 2072 |
| AsuII | TTCGAA | 1 cut(s) | 1115 |
| AsuNHI | GCTAGC | 2 cut(s) | 269, 608 |
| AvaI | CYCGRG | 4 cut(s) | 329, 503, 1257, 1609 |
| AvaII | GGWCC | 4 cut(s) | 182, 223, 887, 1070 |
| BalI | TGGCCA | 1 cut(s) | 2706 |
| BanI | GGYRCC | 1 cut(s) | 346 |
| BanII | GRGCYC | 3 cut(s) | 1732, 1931, 2411 |
| BauI | CACGAG | 3 cut(s) | 1494, 1982, 2404 |
| BbsI | GAAGAC | 4 cut(s) | 1818, 2133, 2729, 2937 |
| Bbv12I | GWGCWC | 3 cut(s) | 768, 1732, 1983 |
| BbvCI | CCTCAGC | 1 cut(s) | 1884 |
| BbvI | GCAGC | 3 cut(s) | 79, 439, 442 |
| BccI | CCATC | 4 cut(s) | 221, 349, 2329, 2822 |
| BceAI | ACGGC | 1 cut(s) | 1421 |
| BcgI | CGANNNNNNTGC | 8 cut(s) | 153, 187, 661, 695, 1574, 1608, 2439, 2473 |
| BciT130I | CCWGG | 3 cut(s) | 306, 980, 1299 |
| BclI | TGATCA | 3 cut(s) | 1504, 2002, 2299 |
| BcnI | CCSGG | 3 cut(s) | 1381, 2180, 2411 |
| BcoDI | GTCTC | 5 cut(s) | 20, 610, 1254, 1280, 2618 |
| BcuI | ACTAGT | 1 cut(s) | 1901 |
| BfmI | CTRYAG | 1 cut(s) | 688 |
| BfoI | RGCGCY | 1 cut(s) | 1494 |
| BfuAI | ACCTGC | 1 cut(s) | 504 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 505 |
| BglII | AGATCT | 1 cut(s) | 2839 |
| BisI | GCNGC | 8 cut(s) | 93, 206, 373, 453, 456, 537, 771, 1051 |
| BlpI | GCTNAGC | 1 cut(s) | 2331 |
| BlsI | GCNGC | 8 cut(s) | 94, 207, 374, 454, 457, 538, 772, 1052 |
| BmcAI | AGTACT | 2 cut(s) | 1227, 2538 |
| Bme1390I | CCNGG | 6 cut(s) | 306, 980, 1299, 1381, 2180, 2411 |
| Bme18I | GGWCC | 4 cut(s) | 182, 223, 887, 1070 |
| BmeT110I | CYCGRG | 4 cut(s) | 329, 503, 1257, 1609 |
| BmgT120I | GGNCC | 7 cut(s) | 182, 223, 506, 856, 887, 962, 1070 |
| BmiI | GGNNCC | 2 cut(s) | 159, 348 |
| BmrFI | CCNGG | 6 cut(s) | 306, 980, 1299, 1381, 2180, 2411 |
| BmrI | ACTGGG | 1 cut(s) | 1298 |
| BmsI | GCATC | 2 cut(s) | 2023, 2277 |
| BmtI | GCTAGC | 2 cut(s) | 273, 612 |
| BmuI | ACTGGG | 1 cut(s) | 1298 |
| BpiI | GAAGAC | 4 cut(s) | 1818, 2133, 2729, 2937 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1682, 1714 |
| BpmI | CTGGAG | 2 cut(s) | 1899, 2387 |
| Bpu10I | CCTNAGC | 4 cut(s) | 580, 1487, 1884, 2115 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2331 |
| Bpu14I | TTCGAA | 1 cut(s) | 1115 |
| BpuEI | CTTGAG | 2 cut(s) | 1262, 2547 |
| BpuMI | CCSGG | 3 cut(s) | 1381, 2180, 2411 |
| BsaAI | YACGTR | 1 cut(s) | 802 |
| BsaHI | GRCGYC | 1 cut(s) | 663 |
| BsaI | GGTCTC | 2 cut(s) | 610, 1280 |
| BsaWI | WCCGGW | 1 cut(s) | 2255 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 672, 865, 985, 2116, 2186, 2326, 2416, 2926 |
| Bse118I | RCCGGY | 2 cut(s) | 260, 2651 |
| Bse1I | ACTGG | 4 cut(s) | 954, 1293, 1656, 2689 |
| Bse3DI | GCAATG | 2 cut(s) | 1639, 2153 |
| BseAI | TCCGGA | 1 cut(s) | 2255 |
| BseBI | CCWGG | 3 cut(s) | 306, 980, 1299 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 672, 865, 985, 2116, 2186, 2326, 2416, 2926 |
| BseMI | GCAATG | 2 cut(s) | 1639, 2153 |
| BseMII | CTCAG | 6 cut(s) | 15, 605, 1472, 1478, 1875, 2322 |
| BseNI | ACTGG | 4 cut(s) | 954, 1293, 1656, 2689 |
| BseRI | GAGGAG | 1 cut(s) | 581 |
| BseX3I | CGGCCG | 4 cut(s) | 554, 1048, 1434, 1932 |
| BseXI | GCAGC | 3 cut(s) | 79, 439, 442 |
| BsgI | GTGCAG | 1 cut(s) | 1010 |
| Bsh1236I | CGCG | 3 cut(s) | 163, 1424, 1766 |
| Bsh1285I | CGRYCG | 5 cut(s) | 557, 738, 1051, 1437, 1935 |
| BshNI | GGYRCC | 1 cut(s) | 346 |
| BsiEI | CGRYCG | 5 cut(s) | 557, 738, 1051, 1437, 1935 |
| BsiHKAI | GWGCWC | 3 cut(s) | 768, 1732, 1983 |
| BsiHKCI | CYCGRG | 4 cut(s) | 329, 503, 1257, 1609 |
| BsiSI | CCGG | 8 cut(s) | 261, 1381, 1482, 1790, 2180, 2256, 2411, 2652 |
| BslFI | GGGAC | 3 cut(s) | 1363, 2162, 2581 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 672, 865, 985, 2116, 2186, 2326, 2416, 2926 |
| BsmAI | GTCTC | 5 cut(s) | 20, 610, 1254, 1280, 2618 |
| BsmBI | CGTCTC | 1 cut(s) | 20 |
| BsmFI | GGGAC | 3 cut(s) | 1363, 2162, 2581 |
| BsmI | GAATGC | 3 cut(s) | 1100, 1245, 2265 |
| Bso31I | GGTCTC | 2 cut(s) | 610, 1280 |
| BsoBI | CYCGRG | 4 cut(s) | 329, 503, 1257, 1609 |
| Bsp119I | TTCGAA | 1 cut(s) | 1115 |
| Bsp1286I | GDGCHC | 5 cut(s) | 768, 1732, 1931, 1983, 2411 |
| Bsp13I | TCCGGA | 1 cut(s) | 2255 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2331 |
| Bsp19I | CCATGG | 1 cut(s) | 1199 |
| BspCNI | CTCAG | 6 cut(s) | 16, 606, 1471, 1479, 1876, 2323 |
| BspEI | TCCGGA | 1 cut(s) | 2255 |
| BspFNI | CGCG | 3 cut(s) | 163, 1424, 1766 |
| BspLI | GGNNCC | 2 cut(s) | 159, 348 |
| BspMI | ACCTGC | 1 cut(s) | 504 |
| BspOI | GCTAGC | 2 cut(s) | 273, 612 |
| BspPI | GGATC | 3 cut(s) | 444, 1473, 2349 |
| BspQI | GCTCTTC | 3 cut(s) | 1683, 1720, 2781 |
| BspT104I | TTCGAA | 1 cut(s) | 1115 |
| BspT107I | GGYRCC | 1 cut(s) | 346 |
| BspTNI | GGTCTC | 2 cut(s) | 610, 1280 |
| BsrBI | CCGCTC | 1 cut(s) | 375 |
| BsrDI | GCAATG | 2 cut(s) | 1639, 2153 |
| BsrFI | RCCGGY | 2 cut(s) | 260, 2651 |
| BsrI | ACTGG | 4 cut(s) | 954, 1293, 1656, 2689 |
| BssAI | RCCGGY | 2 cut(s) | 260, 2651 |
| BssNI | GRCGYC | 1 cut(s) | 663 |
| BssSI | CACGAG | 3 cut(s) | 1494, 1982, 2404 |
| BssT1I | CCWWGG | 7 cut(s) | 883, 1131, 1199, 1235, 1683, 2208, 2920 |
| Bst2BI | CACGAG | 3 cut(s) | 1494, 1982, 2404 |
| Bst2UI | CCWGG | 3 cut(s) | 306, 980, 1299 |
| Bst4CI | ACNGT | 5 cut(s) | 194, 736, 914, 1039, 1965 |
| Bst6I | CTCTTC | 7 cut(s) | 160, 450, 1131, 1683, 1720, 2781, 2970 |
| BstACI | GRCGYC | 1 cut(s) | 663 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1655, 2752 |
| BstBAI | YACGTR | 1 cut(s) | 802 |
| BstBI | TTCGAA | 1 cut(s) | 1115 |
| BstC8I | GCNNGC | 4 cut(s) | 210, 271, 610, 768 |
| BstDSI | CCRYGG | 3 cut(s) | 350, 732, 1199 |
| BstEII | GGTNACC | 1 cut(s) | 931 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2114 |
| BstFNI | CGCG | 3 cut(s) | 163, 1424, 1766 |
| BstH2I | RGCGCY | 1 cut(s) | 1494 |
| BstHHI | GCGC | 2 cut(s) | 1426, 1493 |
| BstMAI | GTCTC | 5 cut(s) | 20, 610, 1254, 1280, 2618 |
| BstMCI | CGRYCG | 5 cut(s) | 557, 738, 1051, 1437, 1935 |
| BstNI | CCWGG | 3 cut(s) | 306, 980, 1299 |
| BstNSI | RCATGY | 1 cut(s) | 713 |
| BstPI | GGTNACC | 1 cut(s) | 931 |
| BstSCI | CCNGG | 6 cut(s) | 304, 978, 1297, 1379, 2178, 2409 |
| BstSFI | CTRYAG | 1 cut(s) | 688 |
| BstUI | CGCG | 3 cut(s) | 163, 1424, 1766 |
| BstV1I | GCAGC | 3 cut(s) | 79, 439, 442 |
| BstV2I | GAAGAC | 4 cut(s) | 1818, 2133, 2729, 2937 |
| BstX2I | RGATCY | 2 cut(s) | 1478, 2839 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 312 |
| BstYI | RGATCY | 2 cut(s) | 1478, 2839 |
| BstZI | CGGCCG | 4 cut(s) | 554, 1048, 1434, 1932 |
| BtgI | CCRYGG | 3 cut(s) | 350, 732, 1199 |
| BtsIMutI | CAGTG | 4 cut(s) | 947, 1035, 1286, 1649 |
| BveI | ACCTGC | 1 cut(s) | 504 |
| Cac8I | GCNNGC | 4 cut(s) | 210, 271, 610, 768 |
| CaiI | CAGNNNCTG | 1 cut(s) | 23 |
| CfoI | GCGC | 2 cut(s) | 1426, 1493 |
| Cfr10I | RCCGGY | 2 cut(s) | 260, 2651 |
| Cfr13I | GGNCC | 7 cut(s) | 182, 223, 506, 856, 887, 962, 1070 |
| CseI | GACGC | 2 cut(s) | 671, 1772 |
| Csp6I | GTAC | 8 cut(s) | 347, 915, 1226, 1284, 2138, 2183, 2537, 2881 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1517, 1552 |
| CviQI | GTAC | 8 cut(s) | 347, 915, 1226, 1284, 2138, 2183, 2537, 2881 |
| EagI | CGGCCG | 4 cut(s) | 554, 1048, 1434, 1932 |
| Eam1104I | CTCTTC | 7 cut(s) | 160, 450, 1131, 1683, 1720, 2781, 2970 |
| EarI | CTCTTC | 7 cut(s) | 160, 450, 1131, 1683, 1720, 2781, 2970 |
| EciI | GGCGGA | 1 cut(s) | 279 |
| Ecl136II | GAGCTC | 1 cut(s) | 1730 |
| EclXI | CGGCCG | 4 cut(s) | 554, 1048, 1434, 1932 |
| Eco130I | CCWWGG | 7 cut(s) | 883, 1131, 1199, 1235, 1683, 2208, 2920 |
| Eco24I | GRGCYC | 3 cut(s) | 1732, 1931, 2411 |
| Eco31I | GGTCTC | 2 cut(s) | 610, 1280 |
| Eco47I | GGWCC | 4 cut(s) | 182, 223, 887, 1070 |
| Eco47III | AGCGCT | 1 cut(s) | 1492 |
| Eco52I | CGGCCG | 4 cut(s) | 554, 1048, 1434, 1932 |
| Eco53kI | GAGCTC | 1 cut(s) | 1730 |
| Eco57I | CTGAAG | 2 cut(s) | 2301, 2805 |
| Eco88I | CYCGRG | 4 cut(s) | 329, 503, 1257, 1609 |
| Eco91I | GGTNACC | 1 cut(s) | 931 |
| EcoICRI | GAGCTC | 1 cut(s) | 1730 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2114 |
| EcoO109I | RGGNCCY | 2 cut(s) | 223, 856 |
| EcoO65I | GGTNACC | 1 cut(s) | 931 |
| EcoRI | GAATTC | 1 cut(s) | 71 |
| EcoRII | CCWGG | 3 cut(s) | 304, 978, 1297 |
| EcoT14I | CCWWGG | 7 cut(s) | 883, 1131, 1199, 1235, 1683, 2208, 2920 |
| EcoT22I | ATGCAT | 1 cut(s) | 2900 |
| EcoT38I | GRGCYC | 3 cut(s) | 1732, 1931, 2411 |
| ErhI | CCWWGG | 7 cut(s) | 883, 1131, 1199, 1235, 1683, 2208, 2920 |
| Esp3I | CGTCTC | 1 cut(s) | 20 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1009, 1041 |
| FaqI | GGGAC | 3 cut(s) | 1363, 2162, 2581 |
| FauNDI | CATATG | 1 cut(s) | 1148 |
| FbaI | TGATCA | 3 cut(s) | 1504, 2002, 2299 |
| FblI | GTMKAC | 2 cut(s) | 2693, 2916 |
| Fnu4HI | GCNGC | 8 cut(s) | 93, 206, 373, 453, 456, 537, 771, 1051 |
| FriOI | GRGCYC | 3 cut(s) | 1732, 1931, 2411 |
| Fsp4HI | GCNGC | 8 cut(s) | 93, 206, 373, 453, 456, 537, 771, 1051 |
| GlaI | GCGC | 2 cut(s) | 1425, 1492 |
| GluI | GCNGC | 8 cut(s) | 93, 206, 373, 453, 456, 537, 771, 1051 |
| GsuI | CTGGAG | 2 cut(s) | 1899, 2387 |
| HaeII | RGCGCY | 1 cut(s) | 1494 |
| HapII | CCGG | 8 cut(s) | 261, 1381, 1482, 1790, 2180, 2256, 2411, 2652 |
| HgaI | GACGC | 2 cut(s) | 671, 1772 |
| HhaI | GCGC | 2 cut(s) | 1426, 1493 |
| Hin1I | GRCGYC | 1 cut(s) | 663 |
| Hin6I | GCGC | 2 cut(s) | 1424, 1491 |
| HinP1I | GCGC | 2 cut(s) | 1424, 1491 |
| HincII | GTYRAC | 3 cut(s) | 144, 1542, 2917 |
| HindII | GTYRAC | 3 cut(s) | 144, 1542, 2917 |
| HindIII | AAGCTT | 2 cut(s) | 2423, 2571 |
| HpaII | CCGG | 8 cut(s) | 261, 1381, 1482, 1790, 2180, 2256, 2411, 2652 |
| HphI | GGTGA | 5 cut(s) | 943, 1612, 1749, 1841, 2072 |
| Hpy188I | TCNGA | 8 cut(s) | 19, 418, 1455, 1969, 2125, 2465, 2819, 2977 |
| Hpy99I | CGWCG | 1 cut(s) | 2329 |
| HpyAV | CCTTC | 9 cut(s) | 599, 603, 1179, 1375, 1639, 2256, 2276, 2440, 2736 |
| HpyCH4III | ACNGT | 5 cut(s) | 194, 736, 914, 1039, 1965 |
| HpyCH4IV | ACGT | 1 cut(s) | 801 |
| HpyCH4V | TGCA | 9 cut(s) | 174, 713, 795, 810, 991, 1181, 2316, 2603, 2898 |
| HpySE526I | ACGT | 1 cut(s) | 801 |
| Hsp92I | GRCGYC | 1 cut(s) | 663 |
| HspAI | GCGC | 2 cut(s) | 1424, 1491 |
| Kpn2I | TCCGGA | 1 cut(s) | 2255 |
| KpnI | GGTACC | 1 cut(s) | 350 |
| Ksp22I | TGATCA | 3 cut(s) | 1504, 2002, 2299 |
| LguI | GCTCTTC | 3 cut(s) | 1683, 1720, 2781 |
| LmnI | GCTCC | 5 cut(s) | 266, 358, 1242, 1880, 2368 |
| Lsp1109I | GCAGC | 3 cut(s) | 79, 439, 442 |
| LweI | GCATC | 2 cut(s) | 2023, 2277 |
| MaeII | ACGT | 1 cut(s) | 801 |
| MaeIII | GTNAC | 5 cut(s) | 931, 1438, 1755, 1780, 2494 |
| MbiI | CCGCTC | 1 cut(s) | 375 |
| MfeI | CAATTG | 3 cut(s) | 62, 714, 2771 |
| MflI | RGATCY | 2 cut(s) | 1478, 2839 |
| MhlI | GDGCHC | 5 cut(s) | 768, 1732, 1931, 1983, 2411 |
| MlsI | TGGCCA | 1 cut(s) | 2706 |
| MluNI | TGGCCA | 1 cut(s) | 2706 |
| MlyI | GAGTC | 2 cut(s) | 523, 1450 |
| MmeI | TCCRAC | 4 cut(s) | 263, 542, 937, 2255 |
| Mox20I | TGGCCA | 1 cut(s) | 2706 |
| Mph1103I | ATGCAT | 1 cut(s) | 2900 |
| MroI | TCCGGA | 1 cut(s) | 2255 |
| MroXI | GAANNNNTTC | 2 cut(s) | 386, 2955 |
| MscI | TGGCCA | 1 cut(s) | 2706 |
| MseI | TTAA | 5 cut(s) | 408, 1184, 2076, 2160, 2946 |
| MslI | CAYNNNNRTG | 2 cut(s) | 331, 410 |
| Msp20I | TGGCCA | 1 cut(s) | 2706 |
| MspA1I | CMGCKG | 1 cut(s) | 1941 |
| MspI | CCGG | 8 cut(s) | 261, 1381, 1482, 1790, 2180, 2256, 2411, 2652 |
| MspR9I | CCNGG | 6 cut(s) | 306, 980, 1299, 1381, 2180, 2411 |
| MunI | CAATTG | 3 cut(s) | 62, 714, 2771 |
| Mva1269I | GAATGC | 3 cut(s) | 1100, 1245, 2265 |
| MvaI | CCWGG | 3 cut(s) | 306, 980, 1299 |
| MvnI | CGCG | 3 cut(s) | 163, 1424, 1766 |
| NciI | CCSGG | 3 cut(s) | 1381, 2180, 2411 |
| NcoI | CCATGG | 1 cut(s) | 1199 |
| NdeI | CATATG | 1 cut(s) | 1148 |
| NheI | GCTAGC | 2 cut(s) | 269, 608 |
| NlaIV | GGNNCC | 2 cut(s) | 159, 348 |
| NmeAIII | GCCGAG | 5 cut(s) | 745, 1026, 1184, 1910, 2171 |
| NmuCI | GTSAC | 3 cut(s) | 931, 1755, 1780 |
| NsiI | ATGCAT | 1 cut(s) | 2900 |
| NspI | RCATGY | 1 cut(s) | 713 |
| NspV | TTCGAA | 1 cut(s) | 1115 |
| OliI | CACNNNNGTG | 1 cut(s) | 331 |
| PaeR7I | CTCGAG | 1 cut(s) | 1257 |
| PciSI | GCTCTTC | 3 cut(s) | 1683, 1720, 2781 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 744, 2876 |
| PctI | GAATGC | 3 cut(s) | 1100, 1245, 2265 |
| PdmI | GAANNNNTTC | 2 cut(s) | 386, 2955 |
| PfeI | GAWTC | 8 cut(s) | 1031, 1042, 1384, 1605, 1712, 1786, 2120, 2456 |
| PflFI | GACNNNGTC | 1 cut(s) | 1017 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2926 |
| PfoI | TCCNGGA | 1 cut(s) | 1379 |
| PkrI | GCNGC | 8 cut(s) | 94, 207, 374, 454, 457, 538, 772, 1052 |
| PleI | GAGTC | 2 cut(s) | 522, 1450 |
| PpsI | GAGTC | 2 cut(s) | 522, 1450 |
| Ppu21I | YACGTR | 1 cut(s) | 802 |
| PpuMI | RGGWCCY | 1 cut(s) | 223 |
| Psp124BI | GAGCTC | 1 cut(s) | 1732 |
| Psp5II | RGGWCCY | 1 cut(s) | 223 |
| Psp6I | CCWGG | 3 cut(s) | 304, 978, 1297 |
| PspEI | GGTNACC | 1 cut(s) | 931 |
| PspGI | CCWGG | 3 cut(s) | 304, 978, 1297 |
| PspN4I | GGNNCC | 2 cut(s) | 159, 348 |
| PspPI | GGNCC | 7 cut(s) | 182, 223, 506, 856, 887, 962, 1070 |
| PspPPI | RGGWCCY | 1 cut(s) | 223 |
| PstNI | CAGNNNCTG | 1 cut(s) | 23 |
| PsuI | RGATCY | 2 cut(s) | 1478, 2839 |
| PsyI | GACNNNGTC | 1 cut(s) | 1017 |
| RsaI | GTAC | 8 cut(s) | 348, 916, 1227, 1285, 2139, 2184, 2538, 2882 |
| RsaNI | GTAC | 8 cut(s) | 347, 915, 1226, 1284, 2138, 2183, 2537, 2881 |
| RseI | CAYNNNNRTG | 2 cut(s) | 331, 410 |
| SacI | GAGCTC | 1 cut(s) | 1732 |
| SalI | GTCGAC | 1 cut(s) | 2915 |
| SapI | GCTCTTC | 3 cut(s) | 1683, 1720, 2781 |
| SaqAI | TTAA | 5 cut(s) | 408, 1184, 2076, 2160, 2946 |
| SatI | GCNGC | 8 cut(s) | 93, 206, 373, 453, 456, 537, 771, 1051 |
| Sau96I | GGNCC | 7 cut(s) | 182, 223, 506, 856, 887, 962, 1070 |
| ScaI | AGTACT | 2 cut(s) | 1227, 2538 |
| SchI | GAGTC | 2 cut(s) | 523, 1450 |
| ScrFI | CCNGG | 6 cut(s) | 306, 980, 1299, 1381, 2180, 2411 |
| SduI | GDGCHC | 5 cut(s) | 768, 1732, 1931, 1983, 2411 |
| SfaNI | GCATC | 2 cut(s) | 2023, 2277 |
| SfcI | CTRYAG | 1 cut(s) | 688 |
| Sfr274I | CTCGAG | 1 cut(s) | 1257 |
| SfuI | TTCGAA | 1 cut(s) | 1115 |
| SinI | GGWCC | 4 cut(s) | 182, 223, 887, 1070 |
| SlaI | CTCGAG | 1 cut(s) | 1257 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 331, 410 |
| SmlI | CTYRAG | 3 cut(s) | 1257, 1277, 2562 |
| SmoI | CTYRAG | 3 cut(s) | 1257, 1277, 2562 |
| SpeI | ACTAGT | 1 cut(s) | 1901 |
| SspI | AATATT | 1 cut(s) | 543 |
| SstI | GAGCTC | 1 cut(s) | 1732 |
| StyD4I | CCNGG | 6 cut(s) | 304, 978, 1297, 1379, 2178, 2409 |
| StyI | CCWWGG | 7 cut(s) | 883, 1131, 1199, 1235, 1683, 2208, 2920 |
| TaaI | ACNGT | 5 cut(s) | 194, 736, 914, 1039, 1965 |
| TaiI | ACGT | 1 cut(s) | 804 |
| TaqII | GACCGA | 3 cut(s) | 1768, 2449, 2860 |
| TatI | WGTACW | 2 cut(s) | 1225, 2536 |
| TauI | GCSGC | 5 cut(s) | 208, 375, 539, 773, 1053 |
| TfiI | GAWTC | 8 cut(s) | 1031, 1042, 1384, 1605, 1712, 1786, 2120, 2456 |
| Tru1I | TTAA | 5 cut(s) | 408, 1184, 2076, 2160, 2946 |
| Tru9I | TTAA | 5 cut(s) | 408, 1184, 2076, 2160, 2946 |
| TscAI | CASTG | 4 cut(s) | 954, 1042, 1293, 1656 |
| TseFI | GTSAC | 3 cut(s) | 931, 1755, 1780 |
| TseI | GCWGC | 3 cut(s) | 92, 452, 455 |
| Tsp45I | GTSAC | 3 cut(s) | 931, 1755, 1780 |
| TspDTI | ATGAA | 9 cut(s) | 506, 593, 992, 1336, 1386, 1971, 2573, 2592, 2702 |
| TspGWI | ACGGA | 2 cut(s) | 367, 879 |
| TspRI | CASTG | 4 cut(s) | 954, 1042, 1293, 1656 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1017 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2926 |
| VpaK11BI | GGWCC | 4 cut(s) | 182, 223, 887, 1070 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2114 |
| XapI | RAATTY | 3 cut(s) | 71, 292, 2605 |
| XceI | RCATGY | 1 cut(s) | 713 |
| XhoI | CTCGAG | 1 cut(s) | 1257 |
| XmiI | GTMKAC | 2 cut(s) | 2693, 2916 |
| XmnI | GAANNNNTTC | 2 cut(s) | 386, 2955 |
| ZrmI | AGTACT | 2 cut(s) | 1227, 2538 |
| Zsp2I | ATGCAT | 1 cut(s) | 2900 |