Plant mobile domain
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PMD | PF10536 | 86 - 304 | 2.9e-28 | Plant mobile domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 306 |
| AciI | CCGC | 4 cut(s) | 304, 321, 401, 419 |
| AclWI | GGATC | 1 cut(s) | 266 |
| AcoI | YGGCCR | 3 cut(s) | 192, 402, 930 |
| AcuI | CTGAAG | 1 cut(s) | 347 |
| AcyI | GRCGYC | 1 cut(s) | 267 |
| AdeI | CACNNNGTG | 1 cut(s) | 829 |
| AfaI | GTAC | 3 cut(s) | 42, 719, 756 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 32, 425 |
| AjnI | CCWGG | 2 cut(s) | 169, 181 |
| AleI | CACNNNNGTG | 1 cut(s) | 825 |
| AluBI | AGCT | 5 cut(s) | 126, 277, 361, 487, 779 |
| AluI | AGCT | 5 cut(s) | 126, 277, 361, 487, 779 |
| Alw21I | GWGCWC | 2 cut(s) | 376, 692 |
| Alw26I | GTCTC | 1 cut(s) | 614 |
| Alw44I | GTGCAC | 2 cut(s) | 372, 688 |
| AlwI | GGATC | 1 cut(s) | 266 |
| AoxI | GGCC | 8 cut(s) | 52, 78, 179, 192, 402, 412, 860, 930 |
| ApaLI | GTGCAC | 2 cut(s) | 372, 688 |
| ApeKI | GCWGC | 4 cut(s) | 317, 480, 650, 886 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 431, 463 |
| AspS9I | GGNCC | 3 cut(s) | 53, 785, 860 |
| AsuC2I | CCSGG | 1 cut(s) | 918 |
| AsuHPI | GGTGA | 2 cut(s) | 197, 812 |
| AvaII | GGWCC | 1 cut(s) | 785 |
| BaeGI | GKGCMC | 2 cut(s) | 376, 692 |
| BalI | TGGCCA | 1 cut(s) | 194 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 24, 56 |
| BbsI | GAAGAC | 1 cut(s) | 809 |
| Bbv12I | GWGCWC | 2 cut(s) | 376, 692 |
| BbvI | GCAGC | 4 cut(s) | 304, 467, 637, 873 |
| BccI | CCATC | 1 cut(s) | 278 |
| BceAI | ACGGC | 2 cut(s) | 500, 917 |
| BciT130I | CCWGG | 2 cut(s) | 171, 183 |
| BcnI | CCSGG | 1 cut(s) | 918 |
| BcoDI | GTCTC | 1 cut(s) | 614 |
| BfaI | CTAG | 1 cut(s) | 123 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 427 |
| BisI | GCNGC | 7 cut(s) | 318, 321, 402, 419, 481, 651, 887 |
| BlsI | GCNGC | 7 cut(s) | 319, 322, 403, 420, 482, 652, 888 |
| BmcAI | AGTACT | 1 cut(s) | 719 |
| Bme1390I | CCNGG | 3 cut(s) | 171, 183, 918 |
| Bme18I | GGWCC | 1 cut(s) | 785 |
| BmgT120I | GGNCC | 3 cut(s) | 53, 785, 860 |
| BmrFI | CCNGG | 3 cut(s) | 171, 183, 918 |
| BpiI | GAAGAC | 1 cut(s) | 809 |
| BpmI | CTGGAG | 1 cut(s) | 377 |
| BpuMI | CCSGG | 1 cut(s) | 918 |
| BsaHI | GRCGYC | 1 cut(s) | 267 |
| BsaJI | CCNNGG | 1 cut(s) | 206 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 350, 380 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 32, 425 |
| Bse1I | ACTGG | 1 cut(s) | 203 |
| BseBI | CCWGG | 2 cut(s) | 171, 183 |
| BseDI | CCNNGG | 1 cut(s) | 206 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 32, 425 |
| BseNI | ACTGG | 1 cut(s) | 203 |
| BseSI | GKGCMC | 2 cut(s) | 376, 692 |
| BseXI | GCAGC | 4 cut(s) | 304, 467, 637, 873 |
| BsgI | GTGCAG | 1 cut(s) | 872 |
| BshFI | GGCC | 8 cut(s) | 54, 80, 181, 194, 404, 414, 862, 932 |
| BsiHKAI | GWGCWC | 2 cut(s) | 376, 692 |
| BsiSI | CCGG | 1 cut(s) | 917 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 32, 425 |
| BsmAI | GTCTC | 1 cut(s) | 614 |
| BsnI | GGCC | 8 cut(s) | 54, 80, 181, 194, 404, 414, 862, 932 |
| Bsp1286I | GDGCHC | 2 cut(s) | 376, 692 |
| Bsp143I | GATC | 4 cut(s) | 258, 472, 493, 766 |
| Bsp19I | CCATGG | 1 cut(s) | 206 |
| BspACI | CCGC | 4 cut(s) | 304, 321, 401, 419 |
| BspANI | GGCC | 8 cut(s) | 54, 80, 181, 194, 404, 414, 862, 932 |
| BspPI | GGATC | 1 cut(s) | 266 |
| BsrBI | CCGCTC | 1 cut(s) | 306 |
| BsrI | ACTGG | 1 cut(s) | 203 |
| BssECI | CCNNGG | 1 cut(s) | 206 |
| BssMI | GATC | 4 cut(s) | 258, 472, 493, 766 |
| BssNI | GRCGYC | 1 cut(s) | 267 |
| BssT1I | CCWWGG | 1 cut(s) | 206 |
| Bst2UI | CCWGG | 2 cut(s) | 171, 183 |
| Bst4CI | ACNGT | 1 cut(s) | 827 |
| Bst6I | CTCTTC | 1 cut(s) | 591 |
| BstACI | GRCGYC | 1 cut(s) | 267 |
| BstC8I | GCNNGC | 5 cut(s) | 315, 416, 485, 648, 798 |
| BstDEI | CTNAG | 4 cut(s) | 377, 488, 501, 682 |
| BstDSI | CCRYGG | 1 cut(s) | 206 |
| BstKTI | GATC | 4 cut(s) | 261, 475, 496, 769 |
| BstMAI | GTCTC | 1 cut(s) | 614 |
| BstMBI | GATC | 4 cut(s) | 258, 472, 493, 766 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 152, 427, 659 |
| BstNI | CCWGG | 2 cut(s) | 171, 183 |
| BstNSI | RCATGY | 1 cut(s) | 650 |
| BstSCI | CCNGG | 3 cut(s) | 169, 181, 916 |
| BstSLI | GKGCMC | 2 cut(s) | 376, 692 |
| BstV1I | GCAGC | 4 cut(s) | 304, 467, 637, 873 |
| BstV2I | GAAGAC | 1 cut(s) | 809 |
| BstX2I | RGATCY | 1 cut(s) | 258 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 177 |
| BstYI | RGATCY | 1 cut(s) | 258 |
| BsuRI | GGCC | 8 cut(s) | 54, 80, 181, 194, 404, 414, 862, 932 |
| BtgI | CCRYGG | 1 cut(s) | 206 |
| BtsIMutI | CAGTG | 2 cut(s) | 139, 823 |
| Cac8I | GCNNGC | 5 cut(s) | 315, 416, 485, 648, 798 |
| Cfr13I | GGNCC | 3 cut(s) | 53, 785, 860 |
| CseI | GACGC | 1 cut(s) | 275 |
| Csp6I | GTAC | 3 cut(s) | 41, 718, 755 |
| CviAII | CATG | 8 cut(s) | 107, 147, 156, 207, 425, 534, 638, 647 |
| CviQI | GTAC | 3 cut(s) | 41, 718, 755 |
| DdeI | CTNAG | 4 cut(s) | 377, 488, 501, 682 |
| DpnI | GATC | 4 cut(s) | 260, 474, 495, 768 |
| DpnII | GATC | 4 cut(s) | 258, 472, 493, 766 |
| DraIII | CACNNNGTG | 1 cut(s) | 829 |
| EaeI | YGGCCR | 3 cut(s) | 192, 402, 930 |
| Eam1104I | CTCTTC | 1 cut(s) | 591 |
| EarI | CTCTTC | 1 cut(s) | 591 |
| Eco130I | CCWWGG | 1 cut(s) | 206 |
| Eco147I | AGGCCT | 1 cut(s) | 414 |
| Eco47I | GGWCC | 1 cut(s) | 785 |
| Eco57I | CTGAAG | 1 cut(s) | 347 |
| EcoRII | CCWGG | 2 cut(s) | 169, 181 |
| EcoT14I | CCWWGG | 1 cut(s) | 206 |
| ErhI | CCWWGG | 1 cut(s) | 206 |
| FaeI | CATG | 8 cut(s) | 110, 150, 159, 210, 428, 537, 641, 650 |
| FatI | CATG | 8 cut(s) | 106, 146, 155, 206, 424, 533, 637, 646 |
| FauNDI | CATATG | 1 cut(s) | 812 |
| Fnu4HI | GCNGC | 7 cut(s) | 318, 321, 402, 419, 481, 651, 887 |
| Fsp4HI | GCNGC | 7 cut(s) | 318, 321, 402, 419, 481, 651, 887 |
| FspBI | CTAG | 1 cut(s) | 123 |
| GluI | GCNGC | 7 cut(s) | 318, 321, 402, 419, 481, 651, 887 |
| GsuI | CTGGAG | 1 cut(s) | 377 |
| HaeIII | GGCC | 8 cut(s) | 54, 80, 181, 194, 404, 414, 862, 932 |
| HapII | CCGG | 1 cut(s) | 917 |
| HgaI | GACGC | 1 cut(s) | 275 |
| Hin1I | GRCGYC | 1 cut(s) | 267 |
| Hin1II | CATG | 8 cut(s) | 110, 150, 159, 210, 428, 537, 641, 650 |
| HincII | GTYRAC | 2 cut(s) | 47, 937 |
| HindII | GTYRAC | 2 cut(s) | 47, 937 |
| HinfI | GANTC | 3 cut(s) | 119, 202, 844 |
| HpaII | CCGG | 1 cut(s) | 917 |
| HphI | GGTGA | 2 cut(s) | 197, 812 |
| Hpy166II | GTNNAC | 6 cut(s) | 47, 282, 374, 439, 690, 937 |
| Hpy188I | TCNGA | 2 cut(s) | 384, 911 |
| Hpy188III | TCNNGA | 5 cut(s) | 25, 64, 223, 356, 593 |
| Hpy8I | GTNNAC | 6 cut(s) | 47, 282, 374, 439, 690, 937 |
| HpyAV | CCTTC | 3 cut(s) | 26, 131, 830 |
| HpyCH4III | ACNGT | 1 cut(s) | 827 |
| HpyCH4IV | ACGT | 1 cut(s) | 43 |
| HpyCH4V | TGCA | 4 cut(s) | 374, 452, 690, 889 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 152, 427, 659 |
| HpyF3I | CTNAG | 4 cut(s) | 377, 488, 501, 682 |
| HpySE526I | ACGT | 1 cut(s) | 43 |
| Hsp92I | GRCGYC | 1 cut(s) | 267 |
| Hsp92II | CATG | 8 cut(s) | 110, 150, 159, 210, 428, 537, 641, 650 |
| Kzo9I | GATC | 4 cut(s) | 258, 472, 493, 766 |
| LmnI | GCTCC | 3 cut(s) | 152, 311, 358 |
| Lsp1109I | GCAGC | 4 cut(s) | 304, 467, 637, 873 |
| MaeI | CTAG | 1 cut(s) | 123 |
| MaeII | ACGT | 1 cut(s) | 43 |
| MaeIII | GTNAC | 5 cut(s) | 299, 464, 570, 631, 829 |
| MalI | GATC | 4 cut(s) | 260, 474, 495, 768 |
| MbiI | CCGCTC | 1 cut(s) | 306 |
| MboI | GATC | 4 cut(s) | 258, 472, 493, 766 |
| MboII | GAAGA | 3 cut(s) | 467, 608, 809 |
| MflI | RGATCY | 1 cut(s) | 258 |
| MhlI | GDGCHC | 2 cut(s) | 376, 692 |
| MlsI | TGGCCA | 1 cut(s) | 194 |
| MluCI | AATT | 2 cut(s) | 523, 850 |
| MluNI | TGGCCA | 1 cut(s) | 194 |
| MnlI | CCTC | 2 cut(s) | 535, 913 |
| Mox20I | TGGCCA | 1 cut(s) | 194 |
| MscI | TGGCCA | 1 cut(s) | 194 |
| MseI | TTAA | 2 cut(s) | 528, 549 |
| MslI | CAYNNNNRTG | 1 cut(s) | 825 |
| Msp20I | TGGCCA | 1 cut(s) | 194 |
| MspI | CCGG | 1 cut(s) | 917 |
| MspR9I | CCNGG | 3 cut(s) | 171, 183, 918 |
| MvaI | CCWGG | 2 cut(s) | 171, 183 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 152, 427, 659 |
| NciI | CCSGG | 1 cut(s) | 918 |
| NcoI | CCATGG | 1 cut(s) | 206 |
| NdeI | CATATG | 1 cut(s) | 812 |
| NdeII | GATC | 4 cut(s) | 258, 472, 493, 766 |
| NlaIII | CATG | 8 cut(s) | 110, 150, 159, 210, 428, 537, 641, 650 |
| NmuCI | GTSAC | 4 cut(s) | 299, 464, 570, 829 |
| NspI | RCATGY | 1 cut(s) | 650 |
| OliI | CACNNNNGTG | 1 cut(s) | 825 |
| PaeI | GCATGC | 1 cut(s) | 650 |
| PceI | AGGCCT | 1 cut(s) | 414 |
| PfeI | GAWTC | 3 cut(s) | 119, 202, 844 |
| PkrI | GCNGC | 7 cut(s) | 319, 322, 403, 420, 482, 652, 888 |
| Psp6I | CCWGG | 2 cut(s) | 169, 181 |
| PspGI | CCWGG | 2 cut(s) | 169, 181 |
| PspPI | GGNCC | 3 cut(s) | 53, 785, 860 |
| PsuI | RGATCY | 1 cut(s) | 258 |
| RsaI | GTAC | 3 cut(s) | 42, 719, 756 |
| RsaNI | GTAC | 3 cut(s) | 41, 718, 755 |
| RseI | CAYNNNNRTG | 1 cut(s) | 825 |
| SaqAI | TTAA | 2 cut(s) | 528, 549 |
| SatI | GCNGC | 7 cut(s) | 318, 321, 402, 419, 481, 651, 887 |
| Sau3AI | GATC | 4 cut(s) | 258, 472, 493, 766 |
| Sau96I | GGNCC | 3 cut(s) | 53, 785, 860 |
| ScaI | AGTACT | 1 cut(s) | 719 |
| ScrFI | CCNGG | 3 cut(s) | 171, 183, 918 |
| SduI | GDGCHC | 2 cut(s) | 376, 692 |
| SetI | ASST | 9 cut(s) | 37, 46, 128, 279, 363, 389, 489, 546, 781 |
| SinI | GGWCC | 1 cut(s) | 785 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 825 |
| SphI | GCATGC | 1 cut(s) | 650 |
| Sse9I | AATT | 2 cut(s) | 523, 850 |
| SseBI | AGGCCT | 1 cut(s) | 414 |
| SsiI | CCGC | 4 cut(s) | 304, 321, 401, 419 |
| SspMI | CTAG | 1 cut(s) | 123 |
| StuI | AGGCCT | 1 cut(s) | 414 |
| StyD4I | CCNGG | 3 cut(s) | 169, 181, 916 |
| StyI | CCWWGG | 1 cut(s) | 206 |
| TaaI | ACNGT | 1 cut(s) | 827 |
| TaiI | ACGT | 1 cut(s) | 46 |
| TaqI | TCGA | 2 cut(s) | 222, 496 |
| TaqII | GACCGA | 1 cut(s) | 848 |
| TasI | AATT | 2 cut(s) | 523, 850 |
| TatI | WGTACW | 2 cut(s) | 717, 754 |
| TauI | GCSGC | 3 cut(s) | 323, 404, 421 |
| TfiI | GAWTC | 3 cut(s) | 119, 202, 844 |
| Tru1I | TTAA | 2 cut(s) | 528, 549 |
| Tru9I | TTAA | 2 cut(s) | 528, 549 |
| TscAI | CASTG | 2 cut(s) | 139, 830 |
| TseFI | GTSAC | 4 cut(s) | 299, 464, 570, 829 |
| TseI | GCWGC | 4 cut(s) | 317, 480, 650, 886 |
| Tsp45I | GTSAC | 4 cut(s) | 299, 464, 570, 829 |
| TspDTI | ATGAA | 3 cut(s) | 17, 45, 123 |
| TspRI | CASTG | 2 cut(s) | 139, 830 |
| VneI | GTGCAC | 2 cut(s) | 372, 688 |
| VpaK11BI | GGWCC | 1 cut(s) | 785 |
| XceI | RCATGY | 1 cut(s) | 650 |
| XspI | CTAG | 1 cut(s) | 123 |
| ZrmI | AGTACT | 1 cut(s) | 719 |