Rmu_sc0006583.1_g000013

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006583.1
OG0000063
Physical Location & Seq
Reverse (-)
55139 .. 58138
3000 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006583.1_g000013.1.cds

Sequence Viewer

Length: 2154 bp
atgctctatatcatgcaggacttggttgtccaagcaatggcttcgaaagggaccggagaagacaattatgaaagcaaacaaaaaagtatcaccaaacgctcatttgcatttgcggaagcactaagtctagccactgaaaagaatgcctcggctttcatgaatagaataacacaacgagtcccgaatgaaggtggggtacgtcaacttggcccaagtttccatagtgatataccggccgatgtggaaaaagttttgagccagcatgaagtagatgattctagctacttcagtgaaggaaaagcatggagagcatggggaacaaaaccaggaaaatggcctggtgaaacggccaactggattccgtgggtagaacgagtcgagaagcgatttggggaaatatggaaacgacttgggatctatgacgccatcaagctgtccacactattactattccttgtgaccgccccttgctggctgccgctatgtatagcggccattataggcctgccgccacatgggcaagtagtggacatcgtatttgcagaaggaaagtgtgacattgatcttggctgcgagctaagagatcgaactaagggcagaccagccgttgctaattttaatacatggattgaggtgtttaacaacggtttgggaaataagtcacttgatagtaatggtagtccagaagagaaaggggaaagccaacaggggacaatggaagtaacccatgtagagcatgctgtgtttcttgccttttggatatgtaagttcttagtgtgcacaacttctaaaaaagtgaatgtggagtactacaagttggccgaagcattagcaagtaaagaagtacaagagagcgatcagccattagctcttggtccatttgtgcttgcccacttatacagatgtcttcaccattgtgtgaccgaaggactgaatccaaattggtctgggccattgtggctttttcagttgtggctgcacacttactttccctctttcagacagccgggtttagcgttggccattgacaccactcttggaaaacaattggctcctcttgatttacttcctcatttggcagaagagtgttttgaggtgttgttcaagtgtccagagttttctgcagaacagtctgccatttgtttcagtaggaagtatccaccctaccttgcaatggatatcagccaacacgcctcagaaagtgagacgagatgggagactgcgtgttcagcttggaagagtgcaataggtggccaagaatctttgaagaagtgtgctaaagggagcacaaagagaaaggccatccatagtgcagccactgaggcggccaaagatggtgccactctgtcttcaacgtctcaatctcctccagcgaaacaaccggcaacacaagatgagcaatcctctgagagcgaagaacaattgtgcgtggccaaacgaagttgcctagagacattcaagaaggccaatgtccaaaatgccattcctagtgaaacagaggaatccatggaactaaccattgataaagatggccaaccaagtagtgacgaacctgtgggggagataatttctcttgaaagaatggccaaaagcgaagttgtggcaatgaatatggaggaaacacttgtgctcacccaaacttcaacgcaagccagtattccctcctcgtcgcttagccaactatcaaaagtgaaagtggccatggatttgttgcttggagccaaatactttgcccctcccaaggtagctttcattgatgagaagctagaagtgttgacccaacaaatatcccgtgtagctggttcataccaagaaatagaaaaaaggagacaacaaatcttgacttgtgagcaaatgaagaaagccttggttcccgagtttgggtggtgtatggaacaaaaacgggttgtggagtctcttgaaggcaagataaatgagttggaaagacaattggcgtccttgaaacaagagagacaagaagtgggggagaagctcattcaaaggagtaagcagtgtttccaaagccaaggacaactgaagaagatagaggccgatttgaaaacttctgagcctaggtgtttgcaacttgagagtgaccttcaggccactggttgtaccttgggagctcttaatgctttattagccgaggaatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

717

Amino Acids

79.69

Weight (kDa)

5.53

Isoelectric Point (pI)

50.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000063)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21382 FvH4_1g29794 FvH4_1g29795 FvH4_2g35573 FvH4_2g35574 FvH4_4g18552 FvH4_5g16044
malus_domestica MD05G1017000.v1.1
prunus_persica Prupe.3G140800_v2.0.a1 Prupe.6G164100_v2.0.a1
pyrus_communis pycom01g04330 pycom03g19820 pycom04g06720 pycom06g11360 pycom06g19000 pycom10g08100 pycom13g16660 pycom13g27590 pycom13g27640 pycom13g27890 pycom16g11770 pycom16g19530
rosa_chinensis RchiOBHm_Chr1g0317341 RchiOBHm_Chr1g0317351 RchiOBHm_Chr1g0320431 RchiOBHm_Chr1g0320711 RchiOBHm_Chr1g0320721 RchiOBHm_Chr1g0321611 RchiOBHm_Chr1g0321621 RchiOBHm_Chr1g0321631 RchiOBHm_Chr1g0323651 RchiOBHm_Chr1g0332991 RchiOBHm_Chr1g0333001 RchiOBHm_Chr1g0335981 RchiOBHm_Chr1g0335991 RchiOBHm_Chr1g0336001 RchiOBHm_Chr1g0350201 RchiOBHm_Chr1g0368201 RchiOBHm_Chr2g0105531 RchiOBHm_Chr2g0105541 RchiOBHm_Chr2g0116571 RchiOBHm_Chr2g0116581 RchiOBHm_Chr2g0121071 RchiOBHm_Chr2g0131351 RchiOBHm_Chr2g0131661 RchiOBHm_Chr2g0133021 RchiOBHm_Chr2g0138181 RchiOBHm_Chr2g0138191 RchiOBHm_Chr2g0142701 RchiOBHm_Chr2g0142711 RchiOBHm_Chr2g0152981 RchiOBHm_Chr3g0456181 RchiOBHm_Chr3g0456191 RchiOBHm_Chr3g0493631 RchiOBHm_Chr3g0496201 RchiOBHm_Chr4g0401541 RchiOBHm_Chr4g0410311 RchiOBHm_Chr4g0410321 RchiOBHm_Chr4g0419231 RchiOBHm_Chr4g0419511 RchiOBHm_Chr4g0419521 RchiOBHm_Chr5g0004311 RchiOBHm_Chr5g0004321 RchiOBHm_Chr5g0038131 RchiOBHm_Chr5g0038251 RchiOBHm_Chr5g0038261 RchiOBHm_Chr5g0038271 RchiOBHm_Chr5g0052241 RchiOBHm_Chr5g0053911 RchiOBHm_Chr5g0074641 RchiOBHm_Chr5g0076651 RchiOBHm_Chr5g0076661 RchiOBHm_Chr6g0249161 RchiOBHm_Chr6g0249171 RchiOBHm_Chr6g0250961 RchiOBHm_Chr6g0253701 RchiOBHm_Chr6g0262131 RchiOBHm_Chr6g0263181 RchiOBHm_Chr6g0263231 RchiOBHm_Chr6g0263241 RchiOBHm_Chr6g0263251 RchiOBHm_Chr6g0291271 RchiOBHm_Chr7g0194611 RchiOBHm_Chr7g0219691 RchiOBHm_Chr7g0219701 RchiOBHm_Chr7g0225431 RchiOBHm_Chr7g0234221 RchiOBHm_Chr7g0238711 RchiOBHm_Chr7g0238721 RchiOBHm_Chr7g0238731 RchiOBHm_Chr7g0239611 RchiOBHm_Chr7g0239621
rosa_laevigata RLG00000001361 RLG00000001376 RLG00000001860 RLG00000002051 RLG00000002362 RLG00000008940 RLG00000012764 RLG00000018782 RLG00000029639 RLG00000030151
rosa_multiflora Rmu_co8090794.1_g000001 Rmu_co8135356.1_g000001 Rmu_co8224968.1_g000001 Rmu_sc0000016.1_g000020 Rmu_sc0000029.1_g000061 Rmu_sc0000035.1_g000032 Rmu_sc0000060.1_g000041 Rmu_sc0000148.1_g000041 Rmu_sc0000315.1_g000084 Rmu_sc0000527.1_g000005 Rmu_sc0000527.1_g000007 Rmu_sc0000527.1_g000008 Rmu_sc0000648.1_g000002 Rmu_sc0000762.1_g000076 Rmu_sc0000870.1_g000003 Rmu_sc0000870.1_g000004 Rmu_sc0000948.1_g000037 Rmu_sc0000997.1_g000003 Rmu_sc0001047.1_g000041 Rmu_sc0001047.1_g000042 Rmu_sc0001075.1_g000044 Rmu_sc0001174.1_g000006 Rmu_sc0001235.1_g000025 Rmu_sc0001292.1_g000008 Rmu_sc0001301.1_g000038 Rmu_sc0001461.1_g000069 Rmu_sc0001461.1_g000070 Rmu_sc0001669.1_g000041 Rmu_sc0001689.1_g000027 Rmu_sc0001896.1_g000008 Rmu_sc0001909.1_g000013 Rmu_sc0002170.1_g000038 Rmu_sc0002200.1_g000014 Rmu_sc0002283.1_g000027 Rmu_sc0002284.1_g000014 Rmu_sc0002294.1_g000017 Rmu_sc0002294.1_g000018 Rmu_sc0002307.1_g000020 Rmu_sc0002307.1_g000021 Rmu_sc0002307.1_g000023 Rmu_sc0002357.1_g000054 Rmu_sc0002409.1_g000005 Rmu_sc0002535.1_g000002 Rmu_sc0002589.1_g000014 Rmu_sc0002759.1_g000016 Rmu_sc0002759.1_g000017 Rmu_sc0002777.1_g000015 Rmu_sc0002824.1_g000016 Rmu_sc0002872.1_g000005 Rmu_sc0002872.1_g000012 Rmu_sc0002872.1_g000013 Rmu_sc0002942.1_g000019 Rmu_sc0003337.1_g000001 Rmu_sc0003410.1_g000052 Rmu_sc0003445.1_g000010 Rmu_sc0003773.1_g000007 Rmu_sc0003773.1_g000008 Rmu_sc0003895.1_g000002 Rmu_sc0004063.1_g000006 Rmu_sc0004088.1_g000009 Rmu_sc0004088.1_g000010 Rmu_sc0004174.1_g000027 Rmu_sc0004196.1_g000010 Rmu_sc0004515.1_g000006 Rmu_sc0004727.1_g000010 Rmu_sc0004755.1_g000018 Rmu_sc0005016.1_g000030 Rmu_sc0005026.1_g000001 Rmu_sc0005044.1_g000007 Rmu_sc0005284.1_g000001 Rmu_sc0005431.1_g000030 Rmu_sc0005802.1_g000014 Rmu_sc0005802.1_g000015 Rmu_sc0005994.1_g000004 Rmu_sc0005994.1_g000005 Rmu_sc0006059.1_g000048 Rmu_sc0006583.1_g000013 Rmu_sc0006824.1_g000009 Rmu_sc0007458.1_g000005 Rmu_sc0007707.1_g000002 Rmu_sc0008242.1_g000012 Rmu_sc0008713.1_g000006 Rmu_sc0008770.1_g000008 Rmu_sc0009785.1_g000004 Rmu_sc0009785.1_g000005 Rmu_sc0010125.1_g000001 Rmu_sc0010211.1_g000004 Rmu_sc0011034.1_g000001 Rmu_sc0011833.1_g000006 Rmu_sc0014851.1_g000001 Rmu_sc0014899.1_g000001 Rmu_sc0015060.1_g000003 Rmu_sc0015186.1_g000001 Rmu_sc0015248.1_g000003 Rmu_sc0015248.1_g000004 Rmu_sc0015314.1_g000001 Rmu_sc0018098.1_g000002 Rmu_sc0022706.1_g000004 Rmu_sc0023350.1_g000002 Rmu_sc0027636.1_g000001 Rmu_sc0027672.1_g000003 Rmu_sc0030879.1_g000001 Rmu_ssc0000008.1_g000029 Rmu_ssc0000019.1_g000014 Rmu_ssc0000050.1_g000082 Rmu_ssc0000282.1_g000004 Rmu_ssc0000311.1_g000010
rosa_roxburghii Rroxscaffold_1G00015190 Rroxscaffold_1G00031880 Rroxscaffold_1G00031890 Rroxscaffold_1G00059310 Rroxscaffold_1G00060420 Rroxscaffold_1G00067930 Rroxscaffold_1G00075030 Rroxscaffold_2G00082210 Rroxscaffold_2G00122970 Rroxscaffold_3G00218230 Rroxscaffold_3G00219020 Rroxscaffold_3G00219030 Rroxscaffold_3G00223680 Rroxscaffold_3G00223690 Rroxscaffold_3G00223700 Rroxscaffold_3G00226870 Rroxscaffold_3G00226880 Rroxscaffold_3G00232990 Rroxscaffold_3G00265610 Rroxscaffold_3G00265620 Rroxscaffold_3G00265630 Rroxscaffold_4G00318660 Rroxscaffold_4G00319060 Rroxscaffold_4G00323500 Rroxscaffold_5G00357520 Rroxscaffold_5G00366150 Rroxscaffold_5G00377470 Rroxscaffold_6G00395700 Rroxscaffold_6G00413950 Rroxscaffold_7G00187650 Rroxscaffold_7G00198290 Rroxscaffold_7G00198300 Rroxscaffold_7G00208060
rosa_rugosa Rorug01G0173900 Rorug01G0174000 Rorug01G0174100 Rorug01G0174100 Rorug02G0341200 Rorug04G0135700 Rorug04G0135800 Rorug05G0032500 Rorug06G0021800
rosa_samantha Rh1AG036600 Rh1AG245800 Rh1CG021700 Rh1CG021800 Rh1CG085800 Rh1CG085900 Rh1CG187900 Rh1CG229600 Rh1CG239600 Rh1CG246500 Rh1CG246600 Rh2BG478100 Rh2DG341300 Rh2DG366600 Rh2DG375700 Rh2DG384300 Rh2DG487000 Rh2DG504000 Rh2DG504100 Rh3AG311800 Rh3AG327500 Rh3AG328300 Rh3BG345100 Rh3CG320100 Rh4AG005700 Rh4AG067900 Rh4AG068000 Rh4AG084400 Rh4AG106700 Rh4AG160000 Rh4AG173900 Rh4AG174000 Rh4CG125300 Rh4CG125500 Rh4CG264500 Rh4DG110800 Rh5AG047300 Rh5AG085200 Rh5AG126300 Rh5AG127300 Rh5AG203000 Rh5AG332400 Rh5AG332500 Rh5AG342400 Rh5AG344100 Rh5AG375600 Rh5AG378300 Rh5AG386000 Rh5AG529600 Rh5BG125200 Rh5CG137600 Rh5CG137700 Rh5DG125200 Rh6BG134100 Rh6BG175400 Rh6BG179500 Rh6BG179600 Rh6BG181600 Rh6BG181700 Rh6BG191100 Rh6BG232900 Rh6BG259700 Rh6BG259800 Rh7AG028000 Rh7AG319400 Rh7AG352700 Rh7AG352800 Rh7AG352900 Rh7AG482500 Rh7AG482600 Rh7AG503800 Rh7BG334700 Rh7CG200100 Rh7CG336200 Rh7CG370200 Rh7CG370400 Rh7CG370500
rosa_wichuraiana Rw1G001580 Rw1G003570 Rw1G004260 Rw1G004270 Rw1G021170 Rw2G019390 Rw2G040280 Rw2G044050 Rw4G004430 Rw5G010950 Rw5G018350 Rw5G032890 Rw6G002840 Rw6G006510 Rw6G007780 Rw6G033790 Rw7G036320 Rw7G040550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 26
AccB1I GGYRCC 1 cut(s) 1337
AccB7I CCANNNNNTGG 1 cut(s) 37
AciI CCGC 6 cut(s) 113, 462, 479, 491, 509, 1325
AclWI GGATC 1 cut(s) 422
AcuI CTGAAG 3 cut(s) 271, 2057, 2084
AcyI GRCGYC 2 cut(s) 423, 1955
AfaI GTAC 4 cut(s) 198, 809, 846, 2116
AfiI CCNNNNNNNGG 8 cut(s) 37, 188, 471, 515, 1174, 1741, 1880, 1881
AjnI CCWGG 2 cut(s) 325, 337
AjuI GAANNNNNNNTTGG 6 cut(s) 1467, 1499, 1733, 1765, 1850, 1882
AleI CACNNNNGTG 1 cut(s) 915
Alw21I GWGCWC 4 cut(s) 782, 1289, 1632, 2128
Alw26I GTCTC 7 cut(s) 1199, 1211, 1362, 1445, 1822, 1920, 1966
Alw44I GTGCAC 1 cut(s) 778
AlwI GGATC 1 cut(s) 422
AlwNI CAGNNNCTG 1 cut(s) 1319
Ama87I CYCGRG 1 cut(s) 1874
ApaLI GTGCAC 1 cut(s) 778
ApeKI GCWGC 4 cut(s) 475, 570, 976, 1313
ArsI GACNNNNNNTTYG 2 cut(s) 521, 553
AspA2I CCTAGG 1 cut(s) 2072
AspS9I GGNCC 4 cut(s) 51, 209, 875, 950
AsuC2I CCSGG 1 cut(s) 1008
AsuHPI GGTGA 4 cut(s) 82, 353, 902, 1624
AsuII TTCGAA 1 cut(s) 44
AvaI CYCGRG 1 cut(s) 1874
AvaII GGWCC 2 cut(s) 51, 875
AvrII CCTAGG 1 cut(s) 2072
BaeGI GKGCMC 1 cut(s) 782
BalI TGGCCA 6 cut(s) 1022, 1254, 1433, 1533, 1586, 1700
BanI GGYRCC 1 cut(s) 1337
BanII GRGCYC 1 cut(s) 2128
BarI GAAGNNNNNNTAC 2 cut(s) 180, 212
BbsI GAAGAC 3 cut(s) 66, 899, 1341
Bbv12I GWGCWC 4 cut(s) 782, 1289, 1632, 2128
BbvI GCAGC 4 cut(s) 462, 557, 963, 1325
BccI CCATC 5 cut(s) 434, 1206, 1310, 1328, 1523
BceAI ACGGC 2 cut(s) 363, 590
BcgI CGANNNNNNTGC 2 cut(s) 24, 58
BciT130I CCWGG 2 cut(s) 327, 339
BciVI GTATCC 1 cut(s) 1167
BcnI CCSGG 1 cut(s) 1008
BcoDI GTCTC 7 cut(s) 1199, 1211, 1362, 1445, 1822, 1920, 1966
BfaI CTAG 6 cut(s) 128, 279, 1448, 1488, 1766, 2073
BfmI CTRYAG 1 cut(s) 1122
BfuI GTATCC 1 cut(s) 1167
BglI GCCNNNNNGGC 3 cut(s) 517, 958, 1322
BisI GCNGC 8 cut(s) 476, 479, 492, 509, 571, 977, 1314, 1326
BlnI CCTAGG 1 cut(s) 2072
BlpI GCTNAGC 1 cut(s) 1673
BlsI GCNGC 8 cut(s) 477, 480, 493, 510, 572, 978, 1315, 1327
BmcAI AGTACT 1 cut(s) 809
Bme1390I CCNGG 3 cut(s) 327, 339, 1008
Bme18I GGWCC 2 cut(s) 51, 875
BmeT110I CYCGRG 1 cut(s) 1874
BmgT120I GGNCC 4 cut(s) 51, 209, 875, 950
BmiI GGNNCC 5 cut(s) 52, 1053, 1339, 1720, 1872
BmrFI CCNGG 3 cut(s) 327, 339, 1008
BpiI GAAGAC 3 cut(s) 66, 899, 1341
BplI GAGNNNNNCTC 2 cut(s) 1388, 1420
BpmI CTGGAG 1 cut(s) 1353
Bpu1102I GCTNAGC 1 cut(s) 1673
Bpu14I TTCGAA 1 cut(s) 44
BpuEI CTTGAG 1 cut(s) 2108
BpuMI CCSGG 1 cut(s) 1008
BsaHI GRCGYC 2 cut(s) 423, 1955
BsaWI WCCGGW 1 cut(s) 53
BsaXI ACNNNNNCTCC 2 cut(s) 1208, 1238
Bsc4I CCNNNNNNNGG 8 cut(s) 37, 188, 471, 515, 1174, 1741, 1880, 1881
Bse118I RCCGGY 2 cut(s) 232, 1381
Bse1I ACTGG 3 cut(s) 359, 1653, 2113
Bse3DI GCAATG 3 cut(s) 42, 1179, 1611
BseBI CCWGG 2 cut(s) 327, 339
BseGI GGATG 1 cut(s) 1302
BseLI CCNNNNNNNGG 8 cut(s) 37, 188, 471, 515, 1174, 1741, 1880, 1881
BseMI GCAATG 3 cut(s) 42, 1179, 1611
BseMII CTCAG 4 cut(s) 1209, 1311, 1398, 2058
BseNI ACTGG 3 cut(s) 359, 1653, 2113
BseRI GAGGAG 3 cut(s) 1044, 1356, 1654
BseSI GKGCMC 1 cut(s) 782
BseX3I CGGCCG 1 cut(s) 234
BseXI GCAGC 4 cut(s) 462, 557, 963, 1325
BsgI GTGCAG 2 cut(s) 962, 1332
Bsh1285I CGRYCG 1 cut(s) 237
BshNI GGYRCC 1 cut(s) 1337
BsiEI CGRYCG 1 cut(s) 237
BsiHKAI GWGCWC 4 cut(s) 782, 1289, 1632, 2128
BsiHKCI CYCGRG 1 cut(s) 1874
BsiSI CCGG 4 cut(s) 54, 233, 1007, 1382
BslFI GGGAC 3 cut(s) 64, 164, 724
BslI CCNNNNNNNGG 8 cut(s) 37, 188, 471, 515, 1174, 1741, 1880, 1881
BsmAI GTCTC 7 cut(s) 1199, 1211, 1362, 1445, 1822, 1920, 1966
BsmBI CGTCTC 2 cut(s) 1199, 1362
BsmFI GGGAC 3 cut(s) 64, 164, 724
BsmI GAATGC 1 cut(s) 148
BsoBI CYCGRG 1 cut(s) 1874
Bsp119I TTCGAA 1 cut(s) 44
Bsp1286I GDGCHC 4 cut(s) 782, 1289, 1632, 2128
Bsp143I GATC 4 cut(s) 414, 562, 583, 856
Bsp1720I GCTNAGC 1 cut(s) 1673
Bsp19I CCATGG 2 cut(s) 1506, 1701
BspACI CCGC 6 cut(s) 113, 462, 479, 491, 509, 1325
BspCNI CTCAG 4 cut(s) 1208, 1312, 1399, 2059
BspHI TCATGA 1 cut(s) 156
BspLI GGNNCC 5 cut(s) 52, 1053, 1339, 1720, 1872
BspMAI CTGCAG 1 cut(s) 1126
BspPI GGATC 1 cut(s) 422
BspT104I TTCGAA 1 cut(s) 44
BspT107I GGYRCC 1 cut(s) 1337
BsrDI GCAATG 3 cut(s) 42, 1179, 1611
BsrFI RCCGGY 2 cut(s) 232, 1381
BsrI ACTGG 3 cut(s) 359, 1653, 2113
BssAI RCCGGY 2 cut(s) 232, 1381
BssMI GATC 4 cut(s) 414, 562, 583, 856
BssNI GRCGYC 2 cut(s) 423, 1955
BssT1I CCWWGG 7 cut(s) 1506, 1701, 1740, 1866, 2026, 2072, 2118
Bst2UI CCWGG 2 cut(s) 327, 339
Bst4CI ACNGT 2 cut(s) 647, 1131
Bst6I CTCTTC 3 cut(s) 681, 1077, 1232
BstACI GRCGYC 2 cut(s) 423, 1955
BstBI TTCGAA 1 cut(s) 44
BstC8I GCNNGC 7 cut(s) 260, 473, 506, 575, 738, 888, 1650
BstDEI CTNAG 9 cut(s) 122, 578, 591, 772, 1195, 1320, 1407, 1673, 2067
BstDSI CCRYGG 3 cut(s) 362, 1506, 1701
BstF5I GGATG 1 cut(s) 1302
BstKTI GATC 4 cut(s) 417, 565, 586, 859
BstMAI GTCTC 7 cut(s) 1199, 1211, 1362, 1445, 1822, 1920, 1966
BstMBI GATC 4 cut(s) 414, 562, 583, 856
BstMCI CGRYCG 1 cut(s) 237
BstMWI GCNNNNNNNGC 7 cut(s) 308, 517, 958, 1229, 1322, 2132, 2141
BstNI CCWGG 2 cut(s) 327, 339
BstNSI RCATGY 1 cut(s) 740
BstSCI CCNGG 3 cut(s) 325, 337, 1006
BstSFI CTRYAG 1 cut(s) 1122
BstSLI GKGCMC 1 cut(s) 782
BstV1I GCAGC 4 cut(s) 462, 557, 963, 1325
BstV2I GAAGAC 3 cut(s) 66, 899, 1341
BstX2I RGATCY 1 cut(s) 414
BstXI CCANNNNNNTGG 1 cut(s) 333
BstYI RGATCY 1 cut(s) 414
BstZI CGGCCG 1 cut(s) 234
BsuI GTATCC 1 cut(s) 1167
BtgI CCRYGG 3 cut(s) 362, 1506, 1701
BtsCI GGATG 1 cut(s) 1302
BtsI GCAGTG 1 cut(s) 2018
BtsIMutI CAGTG 5 cut(s) 132, 295, 1317, 2018, 2106
Cac8I GCNNGC 7 cut(s) 260, 473, 506, 575, 738, 888, 1650
CaiI CAGNNNCTG 1 cut(s) 1319
CciI TCATGA 1 cut(s) 156
Cfr10I RCCGGY 2 cut(s) 232, 1381
Cfr13I GGNCC 4 cut(s) 51, 209, 875, 950
CseI GACGC 2 cut(s) 431, 1944
Csp6I GTAC 4 cut(s) 197, 808, 845, 2115
CviQI GTAC 4 cut(s) 197, 808, 845, 2115
DdeI CTNAG 9 cut(s) 122, 578, 591, 772, 1195, 1320, 1407, 1673, 2067
DpnI GATC 4 cut(s) 416, 564, 585, 858
DpnII GATC 4 cut(s) 414, 562, 583, 856
DrdI GACNNNNNNGTC 1 cut(s) 26
DseDI GACNNNNNNGTC 1 cut(s) 26
EagI CGGCCG 1 cut(s) 234
Eam1104I CTCTTC 3 cut(s) 681, 1077, 1232
EarI CTCTTC 3 cut(s) 681, 1077, 1232
Ecl136II GAGCTC 1 cut(s) 2126
EclXI CGGCCG 1 cut(s) 234
Eco130I CCWWGG 7 cut(s) 1506, 1701, 1740, 1866, 2026, 2072, 2118
Eco147I AGGCCT 1 cut(s) 504
Eco24I GRGCYC 1 cut(s) 2128
Eco32I GATATC 1 cut(s) 1180
Eco47I GGWCC 2 cut(s) 51, 875
Eco52I CGGCCG 1 cut(s) 234
Eco53kI GAGCTC 1 cut(s) 2126
Eco57I CTGAAG 3 cut(s) 271, 2057, 2084
Eco88I CYCGRG 1 cut(s) 1874
EcoICRI GAGCTC 1 cut(s) 2126
EcoRII CCWGG 2 cut(s) 325, 337
EcoRV GATATC 1 cut(s) 1180
EcoT14I CCWWGG 7 cut(s) 1506, 1701, 1740, 1866, 2026, 2072, 2118
EcoT38I GRGCYC 1 cut(s) 2128
ErhI CCWWGG 7 cut(s) 1506, 1701, 1740, 1866, 2026, 2072, 2118
Esp3I CGTCTC 2 cut(s) 1199, 1362
FalI AAGNNNNNCTT 2 cut(s) 1850, 1882
FaqI GGGAC 3 cut(s) 64, 164, 724
Fnu4HI GCNGC 8 cut(s) 476, 479, 492, 509, 571, 977, 1314, 1326
FokI GGATG 1 cut(s) 1289
FriOI GRGCYC 1 cut(s) 2128
Fsp4HI GCNGC 8 cut(s) 476, 479, 492, 509, 571, 977, 1314, 1326
FspBI CTAG 6 cut(s) 128, 279, 1448, 1488, 1766, 2073
GluI GCNGC 8 cut(s) 476, 479, 492, 509, 571, 977, 1314, 1326
GsuI CTGGAG 1 cut(s) 1353
HapII CCGG 4 cut(s) 54, 233, 1007, 1382
HgaI GACGC 2 cut(s) 431, 1944
Hin1I GRCGYC 2 cut(s) 423, 1955
HincII GTYRAC 2 cut(s) 203, 1776
HindII GTYRAC 2 cut(s) 203, 1776
HinfI GANTC 8 cut(s) 177, 275, 358, 375, 934, 1259, 1502, 1913
HpaII CCGG 4 cut(s) 54, 233, 1007, 1382
HphI GGTGA 4 cut(s) 82, 353, 902, 1624
Hpy166II GTNNAC 5 cut(s) 203, 438, 529, 780, 1776
Hpy188I TCNGA 4 cut(s) 1001, 1198, 1408, 2068
Hpy8I GTNNAC 5 cut(s) 203, 438, 529, 780, 1776
Hpy99I CGWCG 1 cut(s) 1672
HpyAV CCTTC 7 cut(s) 182, 287, 539, 920, 1456, 1916, 2108
HpyCH4III ACNGT 2 cut(s) 647, 1131
HpyCH4IV ACGT 2 cut(s) 199, 1355
HpyF10VI GCNNNNNNNGC 7 cut(s) 308, 517, 958, 1229, 1322, 2132, 2141
HpyF3I CTNAG 9 cut(s) 122, 578, 591, 772, 1195, 1320, 1407, 1673, 2067
HpySE526I ACGT 2 cut(s) 199, 1355
Hsp92I GRCGYC 2 cut(s) 423, 1955
Kzo9I GATC 4 cut(s) 414, 562, 583, 856
LmnI GCTCC 4 cut(s) 1057, 1284, 1718, 2123
Lsp1109I GCAGC 4 cut(s) 462, 557, 963, 1325
MaeI CTAG 6 cut(s) 128, 279, 1448, 1488, 1766, 2073
MaeII ACGT 2 cut(s) 199, 1355
MaeIII GTNAC 7 cut(s) 457, 554, 660, 721, 919, 1544, 2093
MalI GATC 4 cut(s) 416, 564, 585, 858
MboI GATC 4 cut(s) 414, 562, 583, 856
MfeI CAATTG 3 cut(s) 1046, 1421, 1949
MflI RGATCY 1 cut(s) 414
MhlI GDGCHC 4 cut(s) 782, 1289, 1632, 2128
MlsI TGGCCA 6 cut(s) 1022, 1254, 1433, 1533, 1586, 1700
MluCI AATT 7 cut(s) 64, 613, 940, 1046, 1421, 1566, 1949
MluNI TGGCCA 6 cut(s) 1022, 1254, 1433, 1533, 1586, 1700
MlyI GAGTC 3 cut(s) 186, 384, 1922
MmeI TCCRAC 1 cut(s) 1920
Mox20I TGGCCA 6 cut(s) 1022, 1254, 1433, 1533, 1586, 1700
MscI TGGCCA 6 cut(s) 1022, 1254, 1433, 1533, 1586, 1700
MseI TTAA 3 cut(s) 618, 639, 2130
MslI CAYNNNNRTG 1 cut(s) 915
Msp20I TGGCCA 6 cut(s) 1022, 1254, 1433, 1533, 1586, 1700
MspI CCGG 4 cut(s) 54, 233, 1007, 1382
MspR9I CCNGG 3 cut(s) 327, 339, 1008
MunI CAATTG 3 cut(s) 1046, 1421, 1949
Mva1269I GAATGC 1 cut(s) 148
MvaI CCWGG 2 cut(s) 327, 339
MwoI GCNNNNNNNGC 7 cut(s) 308, 517, 958, 1229, 1322, 2132, 2141
NciI CCSGG 1 cut(s) 1008
NcoI CCATGG 2 cut(s) 1506, 1701
NdeII GATC 4 cut(s) 414, 562, 583, 856
NlaIV GGNNCC 5 cut(s) 52, 1053, 1339, 1720, 1872
NmeAIII GCCGAG 1 cut(s) 128
NmuCI GTSAC 6 cut(s) 457, 554, 660, 919, 1544, 2093
NspI RCATGY 1 cut(s) 740
NspV TTCGAA 1 cut(s) 44
OliI CACNNNNGTG 1 cut(s) 915
PaeI GCATGC 1 cut(s) 740
PagI TCATGA 1 cut(s) 156
PceI AGGCCT 1 cut(s) 504
PctI GAATGC 1 cut(s) 148
PfeI GAWTC 5 cut(s) 275, 358, 934, 1259, 1502
PflMI CCANNNNNTGG 1 cut(s) 37
PkrI GCNGC 8 cut(s) 477, 480, 493, 510, 572, 978, 1315, 1327
PleI GAGTC 3 cut(s) 185, 383, 1921
PpsI GAGTC 3 cut(s) 185, 383, 1921
Psp124BI GAGCTC 1 cut(s) 2128
Psp6I CCWGG 2 cut(s) 325, 337
PspGI CCWGG 2 cut(s) 325, 337
PspN4I GGNNCC 5 cut(s) 52, 1053, 1339, 1720, 1872
PspPI GGNCC 4 cut(s) 51, 209, 875, 950
PstI CTGCAG 1 cut(s) 1126
PstNI CAGNNNCTG 1 cut(s) 1319
PsuI RGATCY 1 cut(s) 414
RsaI GTAC 4 cut(s) 198, 809, 846, 2116
RsaNI GTAC 4 cut(s) 197, 808, 845, 2115
RseI CAYNNNNRTG 1 cut(s) 915
SacI GAGCTC 1 cut(s) 2128
SaqAI TTAA 3 cut(s) 618, 639, 2130
SatI GCNGC 8 cut(s) 476, 479, 492, 509, 571, 977, 1314, 1326
Sau3AI GATC 4 cut(s) 414, 562, 583, 856
Sau96I GGNCC 4 cut(s) 51, 209, 875, 950
ScaI AGTACT 1 cut(s) 809
SchI GAGTC 3 cut(s) 186, 384, 1922
ScrFI CCNGG 3 cut(s) 327, 339, 1008
SduI GDGCHC 4 cut(s) 782, 1289, 1632, 2128
SfcI CTRYAG 1 cut(s) 1122
SfuI TTCGAA 1 cut(s) 44
SinI GGWCC 2 cut(s) 51, 875
SmiMI CAYNNNNRTG 1 cut(s) 915
SmlI CTYRAG 1 cut(s) 2087
SmoI CTYRAG 1 cut(s) 2087
SphI GCATGC 1 cut(s) 740
Sse9I AATT 7 cut(s) 64, 613, 940, 1046, 1421, 1566, 1949
SseBI AGGCCT 1 cut(s) 504
SsiI CCGC 6 cut(s) 113, 462, 479, 491, 509, 1325
SspMI CTAG 6 cut(s) 128, 279, 1448, 1488, 1766, 2073
SstI GAGCTC 1 cut(s) 2128
StuI AGGCCT 1 cut(s) 504
StyD4I CCNGG 3 cut(s) 325, 337, 1006
StyI CCWWGG 7 cut(s) 1506, 1701, 1740, 1866, 2026, 2072, 2118
TaaI ACNGT 2 cut(s) 647, 1131
TaiI ACGT 2 cut(s) 202, 1358
TaqI TCGA 3 cut(s) 44, 378, 586
TaqII GACCGA 1 cut(s) 938
TasI AATT 7 cut(s) 64, 613, 940, 1046, 1421, 1566, 1949
TatI WGTACW 2 cut(s) 807, 844
TauI GCSGC 4 cut(s) 481, 494, 511, 1328
TfiI GAWTC 5 cut(s) 275, 358, 934, 1259, 1502
Tru1I TTAA 3 cut(s) 618, 639, 2130
Tru9I TTAA 3 cut(s) 618, 639, 2130
TscAI CASTG 5 cut(s) 139, 295, 1324, 2018, 2113
TseFI GTSAC 6 cut(s) 457, 554, 660, 919, 1544, 2093
TseI GCWGC 4 cut(s) 475, 570, 976, 1313
Tsp45I GTSAC 6 cut(s) 457, 554, 660, 919, 1544, 2093
TspDTI ATGAA 9 cut(s) 84, 145, 173, 201, 279, 1622, 1741, 1794, 1871
TspGWI ACGGA 1 cut(s) 351
TspRI CASTG 5 cut(s) 139, 295, 1324, 2018, 2113
Van91I CCANNNNNTGG 1 cut(s) 37
VneI GTGCAC 1 cut(s) 778
VpaK11BI GGWCC 2 cut(s) 51, 875
XceI RCATGY 1 cut(s) 740
XmaJI CCTAGG 1 cut(s) 2072
XspI CTAG 6 cut(s) 128, 279, 1448, 1488, 1766, 2073
ZrmI AGTACT 1 cut(s) 809
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.