Rh2BG478100

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0000063
Physical Location & Seq
Forward (+)
67395109 .. 67396720
1612 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG478100.1

Sequence Viewer

Length: 1152 bp
ATGTGTGACTCAGTCTCACGACGTTACCAAGAACGTCTCAGCCGTTTGAAGATGGAGCCTTACCAAACGAGTTGCACGGCTACACCTCCTTTCGTTAATTGGTGGTCAGATTACTCAAAGAAATTCGTTGACCCAGATTTAAAGGAACTGTTCACACAGCGGATTGTTCAAGGAGTTGGTGATATCTTGAAGAGCCAAGATGGGAGGAAAAGAAAGCGGACTACGACTGATGGTCGCAAAGAAACTCCAACTTTAGCACAACAGAGTTCATCTTTTTCTGAAGAATATTCTCTTGCGGGCTCGGATAACAATAGCGGCCATACTATTGAATTAACTATTGATGATGAGCAGGCTGAAACTTTTGCTAATGGTGAGGACCACGCTTTAATTGATGAATCAGTTCATTCTTTCCCTGACGATCGTGAGGCATACATGGAGGTGCAACATACAAGCGAGGCATTAAGTGTTCATAGAGAAACGACATTCATTCAACAAAATACTTTTAATCAAGCAAACTCTTCTAGACCCTTGTTGTCTGCAGAGGCCTTAGCCTTCTTGGACGAGCTTGCTATGCCACCAAAGATGACACCAAAACAGATTGGCAATGATCGGGAGAAGATAGCGGCCGAGTTTGTAACTGCATGTTGCCGCAAACCCCTTTTGACCGTGGTTGACAACAACCTTTATGACCGCTTCAAACAAGAAACAAAATTCTTGATTTCGGTCAATCATTTTAGTCCCGACCGTGTGCAACAAATTGAAGATCATCTCAAAGTTACAGATGTCAGTGTAGTTGCCTATACACATGCTTTGGAAAAATGGGACACTGGCCGCGCTCTAGAAAAGAAATATGGACCTATTGTGGATCGTCAATCTTCAAGGGCCGCGAAACTCACCCAACTCCATGATGAGTTCAACAAAGATGCACAAGAGTTAGCTGAGCTAGAGAGTCGAGTGAATGTGATCCGGGAGCGCATGTCCACAGCGTCAAACGTTATAAACCAAGAGTATAAAGAACATCATGAAGAGCTCAAGTTGTTTTCCATGCATGGTAGGGACACCCAAGCCTTTTTAGAAATCAAGCATGATCTTGATGAAGCAATGAAGAAGAATGACGCTGACTGGGCTGCATGGGAGAGGATCTTGCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

383

Amino Acids

44.03

Weight (kDa)

5.34

Isoelectric Point (pI)

40.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000063)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21382 FvH4_1g29794 FvH4_1g29795 FvH4_2g35573 FvH4_2g35574 FvH4_4g18552 FvH4_5g16044
malus_domestica MD05G1017000.v1.1
prunus_persica Prupe.3G140800_v2.0.a1 Prupe.6G164100_v2.0.a1
pyrus_communis pycom01g04330 pycom03g19820 pycom04g06720 pycom06g11360 pycom06g19000 pycom10g08100 pycom13g16660 pycom13g27590 pycom13g27640 pycom13g27890 pycom16g11770 pycom16g19530
rosa_chinensis RchiOBHm_Chr1g0317341 RchiOBHm_Chr1g0317351 RchiOBHm_Chr1g0320431 RchiOBHm_Chr1g0320711 RchiOBHm_Chr1g0320721 RchiOBHm_Chr1g0321611 RchiOBHm_Chr1g0321621 RchiOBHm_Chr1g0321631 RchiOBHm_Chr1g0323651 RchiOBHm_Chr1g0332991 RchiOBHm_Chr1g0333001 RchiOBHm_Chr1g0335981 RchiOBHm_Chr1g0335991 RchiOBHm_Chr1g0336001 RchiOBHm_Chr1g0350201 RchiOBHm_Chr1g0368201 RchiOBHm_Chr2g0105531 RchiOBHm_Chr2g0105541 RchiOBHm_Chr2g0116571 RchiOBHm_Chr2g0116581 RchiOBHm_Chr2g0121071 RchiOBHm_Chr2g0131351 RchiOBHm_Chr2g0131661 RchiOBHm_Chr2g0133021 RchiOBHm_Chr2g0138181 RchiOBHm_Chr2g0138191 RchiOBHm_Chr2g0142701 RchiOBHm_Chr2g0142711 RchiOBHm_Chr2g0152981 RchiOBHm_Chr3g0456181 RchiOBHm_Chr3g0456191 RchiOBHm_Chr3g0493631 RchiOBHm_Chr3g0496201 RchiOBHm_Chr4g0401541 RchiOBHm_Chr4g0410311 RchiOBHm_Chr4g0410321 RchiOBHm_Chr4g0419231 RchiOBHm_Chr4g0419511 RchiOBHm_Chr4g0419521 RchiOBHm_Chr5g0004311 RchiOBHm_Chr5g0004321 RchiOBHm_Chr5g0038131 RchiOBHm_Chr5g0038251 RchiOBHm_Chr5g0038261 RchiOBHm_Chr5g0038271 RchiOBHm_Chr5g0052241 RchiOBHm_Chr5g0053911 RchiOBHm_Chr5g0074641 RchiOBHm_Chr5g0076651 RchiOBHm_Chr5g0076661 RchiOBHm_Chr6g0249161 RchiOBHm_Chr6g0249171 RchiOBHm_Chr6g0250961 RchiOBHm_Chr6g0253701 RchiOBHm_Chr6g0262131 RchiOBHm_Chr6g0263181 RchiOBHm_Chr6g0263231 RchiOBHm_Chr6g0263241 RchiOBHm_Chr6g0263251 RchiOBHm_Chr6g0291271 RchiOBHm_Chr7g0194611 RchiOBHm_Chr7g0219691 RchiOBHm_Chr7g0219701 RchiOBHm_Chr7g0225431 RchiOBHm_Chr7g0234221 RchiOBHm_Chr7g0238711 RchiOBHm_Chr7g0238721 RchiOBHm_Chr7g0238731 RchiOBHm_Chr7g0239611 RchiOBHm_Chr7g0239621
rosa_laevigata RLG00000001361 RLG00000001376 RLG00000001860 RLG00000002051 RLG00000002362 RLG00000008940 RLG00000012764 RLG00000018782 RLG00000029639 RLG00000030151
rosa_multiflora Rmu_co8090794.1_g000001 Rmu_co8135356.1_g000001 Rmu_co8224968.1_g000001 Rmu_sc0000016.1_g000020 Rmu_sc0000029.1_g000061 Rmu_sc0000035.1_g000032 Rmu_sc0000060.1_g000041 Rmu_sc0000148.1_g000041 Rmu_sc0000315.1_g000084 Rmu_sc0000527.1_g000005 Rmu_sc0000527.1_g000007 Rmu_sc0000527.1_g000008 Rmu_sc0000648.1_g000002 Rmu_sc0000762.1_g000076 Rmu_sc0000870.1_g000003 Rmu_sc0000870.1_g000004 Rmu_sc0000948.1_g000037 Rmu_sc0000997.1_g000003 Rmu_sc0001047.1_g000041 Rmu_sc0001047.1_g000042 Rmu_sc0001075.1_g000044 Rmu_sc0001174.1_g000006 Rmu_sc0001235.1_g000025 Rmu_sc0001292.1_g000008 Rmu_sc0001301.1_g000038 Rmu_sc0001461.1_g000069 Rmu_sc0001461.1_g000070 Rmu_sc0001669.1_g000041 Rmu_sc0001689.1_g000027 Rmu_sc0001896.1_g000008 Rmu_sc0001909.1_g000013 Rmu_sc0002170.1_g000038 Rmu_sc0002200.1_g000014 Rmu_sc0002283.1_g000027 Rmu_sc0002284.1_g000014 Rmu_sc0002294.1_g000017 Rmu_sc0002294.1_g000018 Rmu_sc0002307.1_g000020 Rmu_sc0002307.1_g000021 Rmu_sc0002307.1_g000023 Rmu_sc0002357.1_g000054 Rmu_sc0002409.1_g000005 Rmu_sc0002535.1_g000002 Rmu_sc0002589.1_g000014 Rmu_sc0002759.1_g000016 Rmu_sc0002759.1_g000017 Rmu_sc0002777.1_g000015 Rmu_sc0002824.1_g000016 Rmu_sc0002872.1_g000005 Rmu_sc0002872.1_g000012 Rmu_sc0002872.1_g000013 Rmu_sc0002942.1_g000019 Rmu_sc0003337.1_g000001 Rmu_sc0003410.1_g000052 Rmu_sc0003445.1_g000010 Rmu_sc0003773.1_g000007 Rmu_sc0003773.1_g000008 Rmu_sc0003895.1_g000002 Rmu_sc0004063.1_g000006 Rmu_sc0004088.1_g000009 Rmu_sc0004088.1_g000010 Rmu_sc0004174.1_g000027 Rmu_sc0004196.1_g000010 Rmu_sc0004515.1_g000006 Rmu_sc0004727.1_g000010 Rmu_sc0004755.1_g000018 Rmu_sc0005016.1_g000030 Rmu_sc0005026.1_g000001 Rmu_sc0005044.1_g000007 Rmu_sc0005284.1_g000001 Rmu_sc0005431.1_g000030 Rmu_sc0005802.1_g000014 Rmu_sc0005802.1_g000015 Rmu_sc0005994.1_g000004 Rmu_sc0005994.1_g000005 Rmu_sc0006059.1_g000048 Rmu_sc0006583.1_g000013 Rmu_sc0006824.1_g000009 Rmu_sc0007458.1_g000005 Rmu_sc0007707.1_g000002 Rmu_sc0008242.1_g000012 Rmu_sc0008713.1_g000006 Rmu_sc0008770.1_g000008 Rmu_sc0009785.1_g000004 Rmu_sc0009785.1_g000005 Rmu_sc0010125.1_g000001 Rmu_sc0010211.1_g000004 Rmu_sc0011034.1_g000001 Rmu_sc0011833.1_g000006 Rmu_sc0014851.1_g000001 Rmu_sc0014899.1_g000001 Rmu_sc0015060.1_g000003 Rmu_sc0015186.1_g000001 Rmu_sc0015248.1_g000003 Rmu_sc0015248.1_g000004 Rmu_sc0015314.1_g000001 Rmu_sc0018098.1_g000002 Rmu_sc0022706.1_g000004 Rmu_sc0023350.1_g000002 Rmu_sc0027636.1_g000001 Rmu_sc0027672.1_g000003 Rmu_sc0030879.1_g000001 Rmu_ssc0000008.1_g000029 Rmu_ssc0000019.1_g000014 Rmu_ssc0000050.1_g000082 Rmu_ssc0000282.1_g000004 Rmu_ssc0000311.1_g000010
rosa_roxburghii Rroxscaffold_1G00015190 Rroxscaffold_1G00031880 Rroxscaffold_1G00031890 Rroxscaffold_1G00059310 Rroxscaffold_1G00060420 Rroxscaffold_1G00067930 Rroxscaffold_1G00075030 Rroxscaffold_2G00082210 Rroxscaffold_2G00122970 Rroxscaffold_3G00218230 Rroxscaffold_3G00219020 Rroxscaffold_3G00219030 Rroxscaffold_3G00223680 Rroxscaffold_3G00223690 Rroxscaffold_3G00223700 Rroxscaffold_3G00226870 Rroxscaffold_3G00226880 Rroxscaffold_3G00232990 Rroxscaffold_3G00265610 Rroxscaffold_3G00265620 Rroxscaffold_3G00265630 Rroxscaffold_4G00318660 Rroxscaffold_4G00319060 Rroxscaffold_4G00323500 Rroxscaffold_5G00357520 Rroxscaffold_5G00366150 Rroxscaffold_5G00377470 Rroxscaffold_6G00395700 Rroxscaffold_6G00413950 Rroxscaffold_7G00187650 Rroxscaffold_7G00198290 Rroxscaffold_7G00198300 Rroxscaffold_7G00208060
rosa_rugosa Rorug01G0173900 Rorug01G0174000 Rorug01G0174100 Rorug01G0174100 Rorug02G0341200 Rorug04G0135700 Rorug04G0135800 Rorug05G0032500 Rorug06G0021800
rosa_samantha Rh1AG036600 Rh1AG245800 Rh1CG021700 Rh1CG021800 Rh1CG085800 Rh1CG085900 Rh1CG187900 Rh1CG229600 Rh1CG239600 Rh1CG246500 Rh1CG246600 Rh2BG478100 Rh2DG341300 Rh2DG366600 Rh2DG375700 Rh2DG384300 Rh2DG487000 Rh2DG504000 Rh2DG504100 Rh3AG311800 Rh3AG327500 Rh3AG328300 Rh3BG345100 Rh3CG320100 Rh4AG005700 Rh4AG067900 Rh4AG068000 Rh4AG084400 Rh4AG106700 Rh4AG160000 Rh4AG173900 Rh4AG174000 Rh4CG125300 Rh4CG125500 Rh4CG264500 Rh4DG110800 Rh5AG047300 Rh5AG085200 Rh5AG126300 Rh5AG127300 Rh5AG203000 Rh5AG332400 Rh5AG332500 Rh5AG342400 Rh5AG344100 Rh5AG375600 Rh5AG378300 Rh5AG386000 Rh5AG529600 Rh5BG125200 Rh5CG137600 Rh5CG137700 Rh5DG125200 Rh6BG134100 Rh6BG175400 Rh6BG179500 Rh6BG179600 Rh6BG181600 Rh6BG181700 Rh6BG191100 Rh6BG232900 Rh6BG259700 Rh6BG259800 Rh7AG028000 Rh7AG319400 Rh7AG352700 Rh7AG352800 Rh7AG352900 Rh7AG482500 Rh7AG482600 Rh7AG503800 Rh7BG334700 Rh7CG200100 Rh7CG336200 Rh7CG370200 Rh7CG370400 Rh7CG370500
rosa_wichuraiana Rw1G001580 Rw1G003570 Rw1G004260 Rw1G004270 Rw1G021170 Rw2G019390 Rw2G040280 Rw2G044050 Rw4G004430 Rw5G010950 Rw5G018350 Rw5G032890 Rw6G002840 Rw6G006510 Rw6G007780 Rw6G033790 Rw7G036320 Rw7G040550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 998
AccII CGCG 2 cut(s) 834, 887
AciI CCGC 9 cut(s) 160, 217, 296, 315, 623, 649, 691, 832, 885
AclI AACGTT 1 cut(s) 993
AclWI GGATC 3 cut(s) 873, 958, 1148
AcoI YGGCCR 3 cut(s) 316, 624, 829
AcsI RAATTY 2 cut(s) 122, 710
AcuI CTGAAG 1 cut(s) 300
AgsI TTSAA 9 cut(s) 49, 170, 190, 329, 491, 697, 761, 879, 916
AhdI GACNNNNNGTC 1 cut(s) 231
AluBI AGCT 4 cut(s) 565, 938, 943, 1030
AluI AGCT 4 cut(s) 565, 938, 943, 1030
Alw21I GWGCWC 1 cut(s) 1032
Alw26I GTCTC 2 cut(s) 19, 41
AlwI GGATC 3 cut(s) 873, 958, 1148
AoxI GGCC 5 cut(s) 316, 543, 624, 829, 882
ApeKI GCWGC 1 cut(s) 1127
ApoI RAATTY 2 cut(s) 122, 710
Asp700I GAANNNNTTC 1 cut(s) 399
AspLEI GCGC 2 cut(s) 836, 975
AspS9I GGNCC 3 cut(s) 376, 854, 882
AsuC2I CCSGG 1 cut(s) 968
AsuHPI GGTGA 3 cut(s) 191, 383, 886
AvaII GGWCC 2 cut(s) 376, 854
BanII GRGCYC 2 cut(s) 302, 1032
Bbv12I GWGCWC 1 cut(s) 1032
BbvI GCAGC 1 cut(s) 1114
BccI CCATC 3 cut(s) 46, 194, 224
BceAI ACGGC 2 cut(s) 27, 93
BcnI CCSGG 1 cut(s) 968
BcoDI GTCTC 2 cut(s) 19, 41
BfaI CTAG 3 cut(s) 522, 839, 944
BfmI CTRYAG 1 cut(s) 537
BisI GCNGC 6 cut(s) 316, 624, 649, 832, 885, 1128
BlpI GCTNAGC 1 cut(s) 939
BlsI GCNGC 6 cut(s) 317, 625, 650, 833, 886, 1129
Bme1390I CCNGG 1 cut(s) 968
Bme18I GGWCC 2 cut(s) 376, 854
BmeRI GACNNNNNGTC 1 cut(s) 231
BmgT120I GGNCC 3 cut(s) 376, 854, 882
BmiI GGNNCC 1 cut(s) 57
BmrFI CCNGG 1 cut(s) 968
BmrI ACTGGG 1 cut(s) 1132
BmsI GCATC 1 cut(s) 913
BmuI ACTGGG 1 cut(s) 1132
Bpu10I CCTNAGC 1 cut(s) 547
Bpu1102I GCTNAGC 1 cut(s) 939
BpuEI CTTGAG 1 cut(s) 1016
BpuMI CCSGG 1 cut(s) 968
BsaJI CCNNGG 1 cut(s) 666
BsaXI ACNNNNNCTCC 2 cut(s) 962, 992
Bse1I ACTGG 2 cut(s) 832, 1127
Bse3DI GCAATG 2 cut(s) 610, 1107
BseDI CCNNGG 1 cut(s) 666
BseMI GCAATG 2 cut(s) 610, 1107
BseMII CTCAG 3 cut(s) 24, 52, 930
BseNI ACTGG 2 cut(s) 832, 1127
BseX3I CGGCCG 1 cut(s) 624
BseXI GCAGC 1 cut(s) 1114
Bsh1236I CGCG 2 cut(s) 834, 887
Bsh1285I CGRYCG 3 cut(s) 421, 627, 745
BshFI GGCC 5 cut(s) 318, 545, 626, 831, 884
BsiEI CGRYCG 3 cut(s) 421, 627, 745
BsiHKAI GWGCWC 1 cut(s) 1032
BsiSI CCGG 1 cut(s) 967
BslFI GGGAC 3 cut(s) 723, 836, 1070
BsmAI GTCTC 2 cut(s) 19, 41
BsmBI CGTCTC 1 cut(s) 41
BsmFI GGGAC 3 cut(s) 723, 836, 1070
BsnI GGCC 5 cut(s) 318, 545, 626, 831, 884
Bsp1286I GDGCHC 2 cut(s) 302, 1032
Bsp143I GATC 7 cut(s) 418, 607, 763, 865, 963, 1087, 1140
Bsp1720I GCTNAGC 1 cut(s) 939
BspACI CCGC 9 cut(s) 160, 217, 296, 315, 623, 649, 691, 832, 885
BspANI GGCC 5 cut(s) 318, 545, 626, 831, 884
BspCNI CTCAG 3 cut(s) 23, 51, 931
BspFNI CGCG 2 cut(s) 834, 887
BspHI TCATGA 1 cut(s) 1021
BspLI GGNNCC 1 cut(s) 57
BspMAI CTGCAG 1 cut(s) 541
BspPI GGATC 3 cut(s) 873, 958, 1148
BspQI GCTCTTC 2 cut(s) 185, 1020
BsrDI GCAATG 2 cut(s) 610, 1107
BsrI ACTGG 2 cut(s) 832, 1127
BssECI CCNNGG 1 cut(s) 666
BssMI GATC 7 cut(s) 418, 607, 763, 865, 963, 1087, 1140
Bst4CI ACNGT 3 cut(s) 150, 667, 746
Bst6I CTCTTC 3 cut(s) 185, 523, 1020
BstC8I GCNNGC 3 cut(s) 298, 351, 567
BstDEI CTNAG 4 cut(s) 10, 38, 547, 939
BstDSI CCRYGG 1 cut(s) 666
BstFNI CGCG 2 cut(s) 834, 887
BstHHI GCGC 2 cut(s) 836, 975
BstKTI GATC 7 cut(s) 421, 610, 766, 868, 966, 1090, 1143
BstMAI GTCTC 2 cut(s) 19, 41
BstMBI GATC 7 cut(s) 418, 607, 763, 865, 963, 1087, 1140
BstMCI CGRYCG 3 cut(s) 421, 627, 745
BstMWI GCNNNNNNNGC 2 cut(s) 571, 1124
BstNSI RCATGY 3 cut(s) 645, 809, 979
BstSCI CCNGG 1 cut(s) 966
BstSFI CTRYAG 1 cut(s) 537
BstUI CGCG 2 cut(s) 834, 887
BstV1I GCAGC 1 cut(s) 1114
BstX2I RGATCY 1 cut(s) 1140
BstYI RGATCY 1 cut(s) 1140
BstZI CGGCCG 1 cut(s) 624
BsuRI GGCC 5 cut(s) 318, 545, 626, 831, 884
BtgI CCRYGG 1 cut(s) 666
BtsIMutI CAGTG 2 cut(s) 793, 825
Cac8I GCNNGC 3 cut(s) 298, 351, 567
CciI TCATGA 1 cut(s) 1021
CfoI GCGC 2 cut(s) 836, 975
Cfr13I GGNCC 3 cut(s) 376, 854, 882
CseI GACGC 2 cut(s) 975, 1124
DdeI CTNAG 4 cut(s) 10, 38, 547, 939
DpnI GATC 7 cut(s) 420, 609, 765, 867, 965, 1089, 1142
DpnII GATC 7 cut(s) 418, 607, 763, 865, 963, 1087, 1140
DraI TTTAAA 1 cut(s) 141
DriI GACNNNNNGTC 1 cut(s) 231
EaeI YGGCCR 3 cut(s) 316, 624, 829
EagI CGGCCG 1 cut(s) 624
Eam1104I CTCTTC 3 cut(s) 185, 523, 1020
Eam1105I GACNNNNNGTC 1 cut(s) 231
EarI CTCTTC 3 cut(s) 185, 523, 1020
Ecl136II GAGCTC 1 cut(s) 1030
EclXI CGGCCG 1 cut(s) 624
Eco147I AGGCCT 1 cut(s) 545
Eco24I GRGCYC 2 cut(s) 302, 1032
Eco32I GATATC 1 cut(s) 184
Eco47I GGWCC 2 cut(s) 376, 854
Eco52I CGGCCG 1 cut(s) 624
Eco53kI GAGCTC 1 cut(s) 1030
Eco57I CTGAAG 1 cut(s) 300
EcoICRI GAGCTC 1 cut(s) 1030
EcoRV GATATC 1 cut(s) 184
EcoT22I ATGCAT 1 cut(s) 1050
EcoT38I GRGCYC 2 cut(s) 302, 1032
Esp3I CGTCTC 1 cut(s) 41
FaqI GGGAC 3 cut(s) 723, 836, 1070
FauI CCCGC 1 cut(s) 289
Fnu4HI GCNGC 6 cut(s) 316, 624, 649, 832, 885, 1128
FriOI GRGCYC 2 cut(s) 302, 1032
Fsp4HI GCNGC 6 cut(s) 316, 624, 649, 832, 885, 1128
FspBI CTAG 3 cut(s) 522, 839, 944
GlaI GCGC 2 cut(s) 835, 974
GluI GCNGC 6 cut(s) 316, 624, 649, 832, 885, 1128
HaeIII GGCC 5 cut(s) 318, 545, 626, 831, 884
HapII CCGG 1 cut(s) 967
HgaI GACGC 2 cut(s) 975, 1124
HhaI GCGC 2 cut(s) 836, 975
Hin6I GCGC 2 cut(s) 834, 973
HinP1I GCGC 2 cut(s) 834, 973
HincII GTYRAC 2 cut(s) 130, 673
HindII GTYRAC 2 cut(s) 130, 673
HinfI GANTC 3 cut(s) 8, 395, 949
HpaII CCGG 1 cut(s) 967
HphI GGTGA 3 cut(s) 191, 383, 886
Hpy166II GTNNAC 4 cut(s) 130, 153, 673, 981
Hpy188I TCNGA 3 cut(s) 109, 280, 304
Hpy8I GTNNAC 4 cut(s) 130, 153, 673, 981
Hpy99I CGWCG 1 cut(s) 24
HpyAV CCTTC 1 cut(s) 562
HpyCH4III ACNGT 3 cut(s) 150, 667, 746
HpyCH4IV ACGT 3 cut(s) 22, 34, 993
HpyCH4V TGCA 8 cut(s) 75, 442, 539, 641, 751, 926, 1048, 1130
HpyF10VI GCNNNNNNNGC 2 cut(s) 571, 1124
HpyF3I CTNAG 4 cut(s) 10, 38, 547, 939
HpySE526I ACGT 3 cut(s) 22, 34, 993
HspAI GCGC 2 cut(s) 834, 973
Kzo9I GATC 7 cut(s) 418, 607, 763, 865, 963, 1087, 1140
LguI GCTCTTC 2 cut(s) 185, 1020
LmnI GCTCC 2 cut(s) 55, 970
LpnPI CCDG 6 cut(s) 147, 335, 426, 813, 980, 1108
Lsp1109I GCAGC 1 cut(s) 1114
LweI GCATC 1 cut(s) 913
MaeI CTAG 3 cut(s) 522, 839, 944
MaeII ACGT 3 cut(s) 22, 34, 993
MaeIII GTNAC 4 cut(s) 5, 23, 634, 775
MalI GATC 7 cut(s) 420, 609, 765, 867, 965, 1089, 1142
MboI GATC 7 cut(s) 418, 607, 763, 865, 963, 1087, 1140
MflI RGATCY 1 cut(s) 1140
MhlI GDGCHC 2 cut(s) 302, 1032
MluCI AATT 6 cut(s) 97, 122, 329, 387, 710, 756
MlyI GAGTC 2 cut(s) 2, 958
MmeI TCCRAC 1 cut(s) 272
MnlI CCTC 8 cut(s) 96, 198, 367, 418, 430, 448, 535, 1131
Mph1103I ATGCAT 1 cut(s) 1050
MroXI GAANNNNTTC 1 cut(s) 399
MseI TTAA 6 cut(s) 96, 140, 332, 386, 461, 504
MslI CAYNNNNRTG 1 cut(s) 437
MspA1I CMGCKG 1 cut(s) 160
MspI CCGG 1 cut(s) 967
MspR9I CCNGG 1 cut(s) 968
MvnI CGCG 2 cut(s) 834, 887
MwoI GCNNNNNNNGC 2 cut(s) 571, 1124
NciI CCSGG 1 cut(s) 968
NdeII GATC 7 cut(s) 418, 607, 763, 865, 963, 1087, 1140
NlaIV GGNNCC 1 cut(s) 57
NmeAIII GCCGAG 1 cut(s) 652
NmuCI GTSAC 1 cut(s) 5
NsiI ATGCAT 1 cut(s) 1050
NspI RCATGY 3 cut(s) 645, 809, 979
PagI TCATGA 1 cut(s) 1021
PceI AGGCCT 1 cut(s) 545
PciSI GCTCTTC 2 cut(s) 185, 1020
PcsI WCGNNNNNNNCGW 1 cut(s) 40
PdmI GAANNNNTTC 1 cut(s) 399
PfeI GAWTC 1 cut(s) 395
PflFI GACNNNGTC 1 cut(s) 11
PfoI TCCNGGA 1 cut(s) 966
PkrI GCNGC 6 cut(s) 317, 625, 650, 833, 886, 1129
Ple19I CGATCG 1 cut(s) 421
PleI GAGTC 2 cut(s) 2, 957
PpsI GAGTC 2 cut(s) 2, 957
PsiI TTATAA 1 cut(s) 998
Psp124BI GAGCTC 1 cut(s) 1032
Psp1406I AACGTT 1 cut(s) 993
PspN4I GGNNCC 1 cut(s) 57
PspPI GGNCC 3 cut(s) 376, 854, 882
PstI CTGCAG 1 cut(s) 541
PsuI RGATCY 1 cut(s) 1140
PsyI GACNNNGTC 1 cut(s) 11
PvuI CGATCG 1 cut(s) 421
RseI CAYNNNNRTG 1 cut(s) 437
SacI GAGCTC 1 cut(s) 1032
SapI GCTCTTC 2 cut(s) 185, 1020
SaqAI TTAA 6 cut(s) 96, 140, 332, 386, 461, 504
SatI GCNGC 6 cut(s) 316, 624, 649, 832, 885, 1128
Sau3AI GATC 7 cut(s) 418, 607, 763, 865, 963, 1087, 1140
Sau96I GGNCC 3 cut(s) 376, 854, 882
SchI GAGTC 2 cut(s) 2, 958
ScrFI CCNGG 1 cut(s) 968
SduI GDGCHC 2 cut(s) 302, 1032
SfaNI GCATC 1 cut(s) 913
SfcI CTRYAG 1 cut(s) 537
SinI GGWCC 2 cut(s) 376, 854
SmiMI CAYNNNNRTG 1 cut(s) 437
SmlI CTYRAG 1 cut(s) 1031
SmoI CTYRAG 1 cut(s) 1031
Sse9I AATT 6 cut(s) 97, 122, 329, 387, 710, 756
SseBI AGGCCT 1 cut(s) 545
SsiI CCGC 9 cut(s) 160, 217, 296, 315, 623, 649, 691, 832, 885
SspI AATATT 1 cut(s) 287
SspMI CTAG 3 cut(s) 522, 839, 944
SstI GAGCTC 1 cut(s) 1032
StuI AGGCCT 1 cut(s) 545
StyD4I CCNGG 1 cut(s) 966
TaaI ACNGT 3 cut(s) 150, 667, 746
TaiI ACGT 3 cut(s) 25, 37, 996
TaqI TCGA 1 cut(s) 952
TaqII GACCGA 1 cut(s) 712
TasI AATT 6 cut(s) 97, 122, 329, 387, 710, 756
TauI GCSGC 5 cut(s) 318, 626, 651, 834, 887
TfiI GAWTC 1 cut(s) 395
Tru1I TTAA 6 cut(s) 96, 140, 332, 386, 461, 504
Tru9I TTAA 6 cut(s) 96, 140, 332, 386, 461, 504
TscAI CASTG 2 cut(s) 793, 832
TseFI GTSAC 1 cut(s) 5
TseI GCWGC 1 cut(s) 1127
Tsp45I GTSAC 1 cut(s) 5
TspDTI ATGAA 8 cut(s) 258, 392, 408, 458, 475, 1038, 1110, 1118
TspRI CASTG 2 cut(s) 793, 832
Tth111I GACNNNGTC 1 cut(s) 11
VpaK11BI GGWCC 2 cut(s) 376, 854
XapI RAATTY 2 cut(s) 122, 710
XbaI TCTAGA 2 cut(s) 521, 838
XceI RCATGY 3 cut(s) 645, 809, 979
XmnI GAANNNNTTC 1 cut(s) 399
XspI CTAG 3 cut(s) 522, 839, 944
Zsp2I ATGCAT 1 cut(s) 1050
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.