dipeptidyl-peptidase activity
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 346 |
| AccBSI | CCGCTC | 1 cut(s) | 375 |
| AccII | CGCG | 4 cut(s) | 163, 1333, 1424, 1497 |
| AclWI | GGATC | 2 cut(s) | 5, 1473 |
| AcoI | YGGCCR | 8 cut(s) | 210, 314, 370, 534, 554, 1048, 1295, 1434 |
| AcsI | RAATTY | 3 cut(s) | 71, 83, 386 |
| AfaI | GTAC | 4 cut(s) | 225, 916, 1227, 1285 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 30, 672, 865, 985 |
| AflIII | ACRYGT | 1 cut(s) | 801 |
| AgsI | TTSAA | 2 cut(s) | 89, 122 |
| AjnI | CCWGG | 3 cut(s) | 304, 978, 1297 |
| AleI | CACNNNNGTG | 1 cut(s) | 331 |
| Alw21I | GWGCWC | 2 cut(s) | 363, 768 |
| Alw26I | GTCTC | 4 cut(s) | 610, 1155, 1254, 1280 |
| AlwI | GGATC | 2 cut(s) | 5, 1473 |
| Ama87I | CYCGRG | 4 cut(s) | 329, 503, 1257, 1609 |
| ApeKI | GCWGC | 3 cut(s) | 92, 455, 770 |
| ApoI | RAATTY | 3 cut(s) | 71, 83, 386 |
| AspLEI | GCGC | 3 cut(s) | 1333, 1426, 1493 |
| AspS9I | GGNCC | 7 cut(s) | 182, 436, 506, 856, 887, 962, 1070 |
| AsuC2I | CCSGG | 1 cut(s) | 1381 |
| AsuHPI | GGTGA | 1 cut(s) | 943 |
| AsuII | TTCGAA | 1 cut(s) | 1115 |
| AsuNHI | GCTAGC | 1 cut(s) | 608 |
| AvaI | CYCGRG | 4 cut(s) | 329, 503, 1257, 1609 |
| AvaII | GGWCC | 4 cut(s) | 182, 436, 887, 1070 |
| BanI | GGYRCC | 1 cut(s) | 346 |
| Bbv12I | GWGCWC | 2 cut(s) | 363, 768 |
| BbvI | GCAGC | 3 cut(s) | 79, 442, 757 |
| BccI | CCATC | 2 cut(s) | 349, 1400 |
| BceAI | ACGGC | 1 cut(s) | 1421 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 153, 187, 661, 695, 1574, 1608 |
| BciT130I | CCWGG | 3 cut(s) | 306, 980, 1299 |
| BciVI | GTATCC | 1 cut(s) | 238 |
| BclI | TGATCA | 1 cut(s) | 1504 |
| BcnI | CCSGG | 1 cut(s) | 1381 |
| BcoDI | GTCTC | 4 cut(s) | 610, 1155, 1254, 1280 |
| BfaI | CTAG | 5 cut(s) | 35, 227, 279, 527, 609 |
| BfmI | CTRYAG | 1 cut(s) | 688 |
| BfoI | RGCGCY | 1 cut(s) | 1494 |
| BfuI | GTATCC | 1 cut(s) | 238 |
| BisI | GCNGC | 8 cut(s) | 93, 206, 373, 453, 456, 537, 771, 1051 |
| BlpI | GCTNAGC | 1 cut(s) | 1340 |
| BlsI | GCNGC | 8 cut(s) | 94, 207, 374, 454, 457, 538, 772, 1052 |
| BmcAI | AGTACT | 1 cut(s) | 1227 |
| Bme1390I | CCNGG | 4 cut(s) | 306, 980, 1299, 1381 |
| Bme18I | GGWCC | 4 cut(s) | 182, 436, 887, 1070 |
| BmeT110I | CYCGRG | 4 cut(s) | 329, 503, 1257, 1609 |
| BmgT120I | GGNCC | 7 cut(s) | 182, 436, 506, 856, 887, 962, 1070 |
| BmiI | GGNNCC | 3 cut(s) | 159, 184, 348 |
| BmrFI | CCNGG | 4 cut(s) | 306, 980, 1299, 1381 |
| BmrI | ACTGGG | 1 cut(s) | 1298 |
| BmsI | GCATC | 1 cut(s) | 652 |
| BmtI | GCTAGC | 1 cut(s) | 612 |
| BmuI | ACTGGG | 1 cut(s) | 1298 |
| Bpu10I | CCTNAGC | 3 cut(s) | 580, 860, 1487 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1340 |
| Bpu14I | TTCGAA | 1 cut(s) | 1115 |
| BpuEI | CTTGAG | 1 cut(s) | 1262 |
| BpuMI | CCSGG | 1 cut(s) | 1381 |
| BsaAI | YACGTR | 1 cut(s) | 802 |
| BsaI | GGTCTC | 2 cut(s) | 610, 1280 |
| BsaJI | CCNNGG | 8 cut(s) | 350, 720, 732, 883, 1131, 1199, 1235, 1298 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 30, 672, 865, 985 |
| Bse118I | RCCGGY | 3 cut(s) | 208, 260, 438 |
| Bse1I | ACTGG | 3 cut(s) | 278, 954, 1293 |
| BseBI | CCWGG | 3 cut(s) | 306, 980, 1299 |
| BseDI | CCNNGG | 8 cut(s) | 350, 720, 732, 883, 1131, 1199, 1235, 1298 |
| BseGI | GGATG | 5 cut(s) | 360, 730, 958, 978, 1021 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 30, 672, 865, 985 |
| BseMII | CTCAG | 5 cut(s) | 408, 605, 1354, 1472, 1478 |
| BseNI | ACTGG | 3 cut(s) | 278, 954, 1293 |
| BseRI | GAGGAG | 1 cut(s) | 581 |
| BseX3I | CGGCCG | 4 cut(s) | 370, 554, 1048, 1434 |
| BseXI | GCAGC | 3 cut(s) | 79, 442, 757 |
| BsgI | GTGCAG | 1 cut(s) | 1010 |
| Bsh1236I | CGCG | 4 cut(s) | 163, 1333, 1424, 1497 |
| Bsh1285I | CGRYCG | 5 cut(s) | 373, 557, 738, 1051, 1437 |
| BshNI | GGYRCC | 1 cut(s) | 346 |
| BsiEI | CGRYCG | 5 cut(s) | 373, 557, 738, 1051, 1437 |
| BsiHKAI | GWGCWC | 2 cut(s) | 363, 768 |
| BsiHKCI | CYCGRG | 4 cut(s) | 329, 503, 1257, 1609 |
| BsiSI | CCGG | 5 cut(s) | 209, 261, 439, 1381, 1482 |
| BslFI | GGGAC | 1 cut(s) | 1363 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 30, 672, 865, 985 |
| BsmAI | GTCTC | 4 cut(s) | 610, 1155, 1254, 1280 |
| BsmFI | GGGAC | 1 cut(s) | 1363 |
| BsmI | GAATGC | 2 cut(s) | 1100, 1245 |
| Bso31I | GGTCTC | 2 cut(s) | 610, 1280 |
| BsoBI | CYCGRG | 4 cut(s) | 329, 503, 1257, 1609 |
| Bsp119I | TTCGAA | 1 cut(s) | 1115 |
| Bsp1286I | GDGCHC | 2 cut(s) | 363, 768 |
| Bsp143I | GATC | 3 cut(s) | 10, 1478, 1504 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1340 |
| Bsp19I | CCATGG | 1 cut(s) | 1199 |
| BspCNI | CTCAG | 5 cut(s) | 409, 606, 1353, 1471, 1479 |
| BspFNI | CGCG | 4 cut(s) | 163, 1333, 1424, 1497 |
| BspLI | GGNNCC | 3 cut(s) | 159, 184, 348 |
| BspOI | GCTAGC | 1 cut(s) | 612 |
| BspPI | GGATC | 2 cut(s) | 5, 1473 |
| BspT104I | TTCGAA | 1 cut(s) | 1115 |
| BspT107I | GGYRCC | 1 cut(s) | 346 |
| BspTNI | GGTCTC | 2 cut(s) | 610, 1280 |
| BsrBI | CCGCTC | 1 cut(s) | 375 |
| BsrFI | RCCGGY | 3 cut(s) | 208, 260, 438 |
| BsrI | ACTGG | 3 cut(s) | 278, 954, 1293 |
| BssAI | RCCGGY | 3 cut(s) | 208, 260, 438 |
| BssECI | CCNNGG | 8 cut(s) | 350, 720, 732, 883, 1131, 1199, 1235, 1298 |
| BssMI | GATC | 3 cut(s) | 10, 1478, 1504 |
| BssT1I | CCWWGG | 4 cut(s) | 883, 1131, 1199, 1235 |
| Bst2UI | CCWGG | 3 cut(s) | 306, 980, 1299 |
| Bst4CI | ACNGT | 3 cut(s) | 736, 914, 1039 |
| Bst6I | CTCTTC | 3 cut(s) | 160, 450, 1131 |
| BstBAI | YACGTR | 1 cut(s) | 802 |
| BstBI | TTCGAA | 1 cut(s) | 1115 |
| BstC8I | GCNNGC | 4 cut(s) | 210, 610, 768, 1495 |
| BstDEI | CTNAG | 7 cut(s) | 417, 580, 614, 860, 1340, 1458, 1487 |
| BstDSI | CCRYGG | 3 cut(s) | 350, 732, 1199 |
| BstEII | GGTNACC | 1 cut(s) | 931 |
| BstF5I | GGATG | 5 cut(s) | 360, 730, 958, 978, 1021 |
| BstFNI | CGCG | 4 cut(s) | 163, 1333, 1424, 1497 |
| BstH2I | RGCGCY | 1 cut(s) | 1494 |
| BstHHI | GCGC | 3 cut(s) | 1333, 1426, 1493 |
| BstKTI | GATC | 3 cut(s) | 13, 1481, 1507 |
| BstMAI | GTCTC | 4 cut(s) | 610, 1155, 1254, 1280 |
| BstMBI | GATC | 3 cut(s) | 10, 1478, 1504 |
| BstMCI | CGRYCG | 5 cut(s) | 373, 557, 738, 1051, 1437 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 56, 65, 101, 261, 710, 848 |
| BstNI | CCWGG | 3 cut(s) | 306, 980, 1299 |
| BstNSI | RCATGY | 1 cut(s) | 713 |
| BstPI | GGTNACC | 1 cut(s) | 931 |
| BstSCI | CCNGG | 4 cut(s) | 304, 978, 1297, 1379 |
| BstSFI | CTRYAG | 1 cut(s) | 688 |
| BstUI | CGCG | 4 cut(s) | 163, 1333, 1424, 1497 |
| BstV1I | GCAGC | 3 cut(s) | 79, 442, 757 |
| BstX2I | RGATCY | 1 cut(s) | 1478 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 312 |
| BstYI | RGATCY | 1 cut(s) | 1478 |
| BstZI | CGGCCG | 4 cut(s) | 370, 554, 1048, 1434 |
| BsuI | GTATCC | 1 cut(s) | 238 |
| BtgI | CCRYGG | 3 cut(s) | 350, 732, 1199 |
| BtsCI | GGATG | 5 cut(s) | 360, 730, 958, 978, 1021 |
| BtsIMutI | CAGTG | 3 cut(s) | 947, 1035, 1286 |
| Cac8I | GCNNGC | 4 cut(s) | 210, 610, 768, 1495 |
| CfoI | GCGC | 3 cut(s) | 1333, 1426, 1493 |
| Cfr10I | RCCGGY | 3 cut(s) | 208, 260, 438 |
| Cfr13I | GGNCC | 7 cut(s) | 182, 436, 506, 856, 887, 962, 1070 |
| CseI | GACGC | 1 cut(s) | 1322 |
| Csp6I | GTAC | 4 cut(s) | 224, 915, 1226, 1284 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1517, 1552 |
| CviAII | CATG | 9 cut(s) | 378, 433, 490, 605, 710, 761, 1126, 1200, 1398 |
| CviQI | GTAC | 4 cut(s) | 224, 915, 1226, 1284 |
| DdeI | CTNAG | 7 cut(s) | 417, 580, 614, 860, 1340, 1458, 1487 |
| DpnI | GATC | 3 cut(s) | 12, 1480, 1506 |
| DpnII | GATC | 3 cut(s) | 10, 1478, 1504 |
| EaeI | YGGCCR | 8 cut(s) | 210, 314, 370, 534, 554, 1048, 1295, 1434 |
| EagI | CGGCCG | 4 cut(s) | 370, 554, 1048, 1434 |
| Eam1104I | CTCTTC | 3 cut(s) | 160, 450, 1131 |
| EarI | CTCTTC | 3 cut(s) | 160, 450, 1131 |
| EciI | GGCGGA | 1 cut(s) | 279 |
| EclXI | CGGCCG | 4 cut(s) | 370, 554, 1048, 1434 |
| Eco130I | CCWWGG | 4 cut(s) | 883, 1131, 1199, 1235 |
| Eco31I | GGTCTC | 2 cut(s) | 610, 1280 |
| Eco47I | GGWCC | 4 cut(s) | 182, 436, 887, 1070 |
| Eco52I | CGGCCG | 4 cut(s) | 370, 554, 1048, 1434 |
| Eco88I | CYCGRG | 4 cut(s) | 329, 503, 1257, 1609 |
| Eco91I | GGTNACC | 1 cut(s) | 931 |
| EcoO109I | RGGNCCY | 2 cut(s) | 182, 856 |
| EcoO65I | GGTNACC | 1 cut(s) | 931 |
| EcoRI | GAATTC | 1 cut(s) | 71 |
| EcoRII | CCWGG | 3 cut(s) | 304, 978, 1297 |
| EcoT14I | CCWWGG | 4 cut(s) | 883, 1131, 1199, 1235 |
| ErhI | CCWWGG | 4 cut(s) | 883, 1131, 1199, 1235 |
| FaeI | CATG | 9 cut(s) | 381, 436, 493, 608, 713, 764, 1129, 1203, 1401 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1009, 1041 |
| FaqI | GGGAC | 1 cut(s) | 1363 |
| FatI | CATG | 9 cut(s) | 377, 432, 489, 604, 709, 760, 1125, 1199, 1397 |
| FauI | CCCGC | 1 cut(s) | 1502 |
| FauNDI | CATATG | 1 cut(s) | 1148 |
| FbaI | TGATCA | 1 cut(s) | 1504 |
| Fnu4HI | GCNGC | 8 cut(s) | 93, 206, 373, 453, 456, 537, 771, 1051 |
| FokI | GGATG | 5 cut(s) | 367, 737, 965, 985, 1008 |
| Fsp4HI | GCNGC | 8 cut(s) | 93, 206, 373, 453, 456, 537, 771, 1051 |
| FspBI | CTAG | 5 cut(s) | 35, 227, 279, 527, 609 |
| GlaI | GCGC | 3 cut(s) | 1332, 1425, 1492 |
| GluI | GCNGC | 8 cut(s) | 93, 206, 373, 453, 456, 537, 771, 1051 |
| HaeII | RGCGCY | 1 cut(s) | 1494 |
| HapII | CCGG | 5 cut(s) | 209, 261, 439, 1381, 1482 |
| HgaI | GACGC | 1 cut(s) | 1322 |
| HhaI | GCGC | 3 cut(s) | 1333, 1426, 1493 |
| Hin1II | CATG | 9 cut(s) | 381, 436, 493, 608, 713, 764, 1129, 1203, 1401 |
| Hin6I | GCGC | 3 cut(s) | 1331, 1424, 1491 |
| HinP1I | GCGC | 3 cut(s) | 1331, 1424, 1491 |
| HincII | GTYRAC | 1 cut(s) | 1542 |
| HindII | GTYRAC | 1 cut(s) | 1542 |
| HinfI | GANTC | 6 cut(s) | 514, 1031, 1042, 1384, 1456, 1605 |
| HpaII | CCGG | 5 cut(s) | 209, 261, 439, 1381, 1482 |
| HphI | GGTGA | 1 cut(s) | 943 |
| Hpy166II | GTNNAC | 7 cut(s) | 112, 628, 732, 872, 1286, 1413, 1542 |
| Hpy188I | TCNGA | 2 cut(s) | 418, 1455 |
| Hpy188III | TCNNGA | 5 cut(s) | 739, 1257, 1259, 1552, 1609 |
| Hpy8I | GTNNAC | 7 cut(s) | 112, 628, 732, 872, 1286, 1413, 1542 |
| HpyAV | CCTTC | 3 cut(s) | 506, 603, 1179 |
| HpyCH4III | ACNGT | 3 cut(s) | 736, 914, 1039 |
| HpyCH4IV | ACGT | 1 cut(s) | 801 |
| HpyCH4V | TGCA | 6 cut(s) | 174, 713, 795, 810, 991, 1181 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 56, 65, 101, 261, 710, 848 |
| HpyF3I | CTNAG | 7 cut(s) | 417, 580, 614, 860, 1340, 1458, 1487 |
| HpySE526I | ACGT | 1 cut(s) | 801 |
| Hsp92II | CATG | 9 cut(s) | 381, 436, 493, 608, 713, 764, 1129, 1203, 1401 |
| HspAI | GCGC | 3 cut(s) | 1331, 1424, 1491 |
| KroI | GCCGGC | 1 cut(s) | 208 |
| KroNI | GCCGGC | 1 cut(s) | 210 |
| Ksp22I | TGATCA | 1 cut(s) | 1504 |
| Kzo9I | GATC | 3 cut(s) | 10, 1478, 1504 |
| LmnI | GCTCC | 3 cut(s) | 266, 358, 1242 |
| Lsp1109I | GCAGC | 3 cut(s) | 79, 442, 757 |
| LweI | GCATC | 1 cut(s) | 652 |
| MaeI | CTAG | 5 cut(s) | 35, 227, 279, 527, 609 |
| MaeII | ACGT | 1 cut(s) | 801 |
| MaeIII | GTNAC | 2 cut(s) | 931, 1438 |
| MalI | GATC | 3 cut(s) | 12, 1480, 1506 |
| MbiI | CCGCTC | 1 cut(s) | 375 |
| MboI | GATC | 3 cut(s) | 10, 1478, 1504 |
| MfeI | CAATTG | 2 cut(s) | 62, 714 |
| MflI | RGATCY | 1 cut(s) | 1478 |
| MhlI | GDGCHC | 2 cut(s) | 363, 768 |
| MluCI | AATT | 7 cut(s) | 62, 71, 83, 291, 386, 677, 714 |
| MlyI | GAGTC | 2 cut(s) | 523, 1450 |
| MmeI | TCCRAC | 4 cut(s) | 38, 263, 542, 937 |
| MroNI | GCCGGC | 1 cut(s) | 208 |
| MseI | TTAA | 5 cut(s) | 99, 216, 408, 684, 1184 |
| MslI | CAYNNNNRTG | 2 cut(s) | 331, 410 |
| MspA1I | CMGCKG | 1 cut(s) | 455 |
| MspI | CCGG | 5 cut(s) | 209, 261, 439, 1381, 1482 |
| MspR9I | CCNGG | 4 cut(s) | 306, 980, 1299, 1381 |
| MunI | CAATTG | 2 cut(s) | 62, 714 |
| Mva1269I | GAATGC | 2 cut(s) | 1100, 1245 |
| MvaI | CCWGG | 3 cut(s) | 306, 980, 1299 |
| MvnI | CGCG | 4 cut(s) | 163, 1333, 1424, 1497 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 56, 65, 101, 261, 710, 848 |
| NaeI | GCCGGC | 1 cut(s) | 210 |
| NciI | CCSGG | 1 cut(s) | 1381 |
| NcoI | CCATGG | 1 cut(s) | 1199 |
| NdeI | CATATG | 1 cut(s) | 1148 |
| NdeII | GATC | 3 cut(s) | 10, 1478, 1504 |
| NgoMIV | GCCGGC | 1 cut(s) | 208 |
| NheI | GCTAGC | 1 cut(s) | 608 |
| NlaIII | CATG | 9 cut(s) | 381, 436, 493, 608, 713, 764, 1129, 1203, 1401 |
| NlaIV | GGNNCC | 3 cut(s) | 159, 184, 348 |
| NmeAIII | GCCGAG | 3 cut(s) | 745, 1026, 1184 |
| NmuCI | GTSAC | 2 cut(s) | 931, 1438 |
| NspI | RCATGY | 1 cut(s) | 713 |
| NspV | TTCGAA | 1 cut(s) | 1115 |
| OliI | CACNNNNGTG | 1 cut(s) | 331 |
| PaeR7I | CTCGAG | 1 cut(s) | 1257 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 744 |
| PctI | GAATGC | 2 cut(s) | 1100, 1245 |
| PdiI | GCCGGC | 1 cut(s) | 210 |
| PfeI | GAWTC | 4 cut(s) | 1031, 1042, 1384, 1605 |
| PflFI | GACNNNGTC | 1 cut(s) | 1017 |
| PfoI | TCCNGGA | 1 cut(s) | 1379 |
| PkrI | GCNGC | 8 cut(s) | 94, 207, 374, 454, 457, 538, 772, 1052 |
| PleI | GAGTC | 2 cut(s) | 522, 1450 |
| PpsI | GAGTC | 2 cut(s) | 522, 1450 |
| Ppu21I | YACGTR | 1 cut(s) | 802 |
| PpuMI | RGGWCCY | 1 cut(s) | 182 |
| Psp5II | RGGWCCY | 1 cut(s) | 182 |
| Psp6I | CCWGG | 3 cut(s) | 304, 978, 1297 |
| PspEI | GGTNACC | 1 cut(s) | 931 |
| PspGI | CCWGG | 3 cut(s) | 304, 978, 1297 |
| PspN4I | GGNNCC | 3 cut(s) | 159, 184, 348 |
| PspPI | GGNCC | 7 cut(s) | 182, 436, 506, 856, 887, 962, 1070 |
| PspPPI | RGGWCCY | 1 cut(s) | 182 |
| PsuI | RGATCY | 1 cut(s) | 1478 |
| PsyI | GACNNNGTC | 1 cut(s) | 1017 |
| RsaI | GTAC | 4 cut(s) | 225, 916, 1227, 1285 |
| RsaNI | GTAC | 4 cut(s) | 224, 915, 1226, 1284 |
| RseI | CAYNNNNRTG | 2 cut(s) | 331, 410 |
| SaqAI | TTAA | 5 cut(s) | 99, 216, 408, 684, 1184 |
| SatI | GCNGC | 8 cut(s) | 93, 206, 373, 453, 456, 537, 771, 1051 |
| Sau3AI | GATC | 3 cut(s) | 10, 1478, 1504 |
| Sau96I | GGNCC | 7 cut(s) | 182, 436, 506, 856, 887, 962, 1070 |
| ScaI | AGTACT | 1 cut(s) | 1227 |
| SchI | GAGTC | 2 cut(s) | 523, 1450 |
| ScrFI | CCNGG | 4 cut(s) | 306, 980, 1299, 1381 |
| SduI | GDGCHC | 2 cut(s) | 363, 768 |
| SfaNI | GCATC | 1 cut(s) | 652 |
| SfcI | CTRYAG | 1 cut(s) | 688 |
| Sfr274I | CTCGAG | 1 cut(s) | 1257 |
| SfuI | TTCGAA | 1 cut(s) | 1115 |
| SinI | GGWCC | 4 cut(s) | 182, 436, 887, 1070 |
| SlaI | CTCGAG | 1 cut(s) | 1257 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 331, 410 |
| SmlI | CTYRAG | 2 cut(s) | 1257, 1277 |
| SmoI | CTYRAG | 2 cut(s) | 1257, 1277 |
| Sse9I | AATT | 7 cut(s) | 62, 71, 83, 291, 386, 677, 714 |
| SspI | AATATT | 1 cut(s) | 543 |
| SspMI | CTAG | 5 cut(s) | 35, 227, 279, 527, 609 |
| StyD4I | CCNGG | 4 cut(s) | 304, 978, 1297, 1379 |
| StyI | CCWWGG | 4 cut(s) | 883, 1131, 1199, 1235 |
| TaaI | ACNGT | 3 cut(s) | 736, 914, 1039 |
| TaiI | ACGT | 1 cut(s) | 804 |
| TaqI | TCGA | 6 cut(s) | 738, 818, 834, 1012, 1115, 1258 |
| TasI | AATT | 7 cut(s) | 62, 71, 83, 291, 386, 677, 714 |
| TatI | WGTACW | 1 cut(s) | 1225 |
| TauI | GCSGC | 5 cut(s) | 208, 375, 455, 539, 1053 |
| TfiI | GAWTC | 4 cut(s) | 1031, 1042, 1384, 1605 |
| Tru1I | TTAA | 5 cut(s) | 99, 216, 408, 684, 1184 |
| Tru9I | TTAA | 5 cut(s) | 99, 216, 408, 684, 1184 |
| TscAI | CASTG | 3 cut(s) | 954, 1042, 1293 |
| TseFI | GTSAC | 2 cut(s) | 931, 1438 |
| TseI | GCWGC | 3 cut(s) | 92, 455, 770 |
| Tsp45I | GTSAC | 2 cut(s) | 931, 1438 |
| TspDTI | ATGAA | 5 cut(s) | 506, 593, 992, 1336, 1386 |
| TspGWI | ACGGA | 2 cut(s) | 367, 879 |
| TspRI | CASTG | 3 cut(s) | 954, 1042, 1293 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1017 |
| VpaK11BI | GGWCC | 4 cut(s) | 182, 436, 887, 1070 |
| XapI | RAATTY | 3 cut(s) | 71, 83, 386 |
| XceI | RCATGY | 1 cut(s) | 713 |
| XhoI | CTCGAG | 1 cut(s) | 1257 |
| XspI | CTAG | 5 cut(s) | 35, 227, 279, 527, 609 |
| ZrmI | AGTACT | 1 cut(s) | 1227 |