RchiOBHm_Chr2g0138181

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000063
Physical Location & Seq
Reverse (-)
55945029 .. 55946006
978 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ50887

Sequence Viewer

Length: 804 bp
ATGGCTGAAAGCGAAGTTGTGACAAGGAATATGGAAGAAACACTTGTGCTCACCCAAACTTCAACGCAAGCCAGTATTCCCTCCTCGTCGTTTAGTGAGCAACACCTGGTGTTGGCTAATGAACTAGAATGTAATCAAGGGTTTGAAGCCGAACTTCAGGCTTTCATGAGGGCATTTTCGGCCGATGCTCTAATCCAACCAGAATGCTGCTCGGCCATTTTGCAGTTACCGGCCACTCAATTGACATCAAGGGAGGAAATTGATGGGGCTTTGAAGGTGGTAAAGGAAGCGTTAACGCAGCCATTAAAAGAATTTGTGGAAACAGGCCAACTATCAAAAGTGAAAGTGGCCATGGATTTGTTACTTGGAGCCAAATACTTTGCCCCTCCCAAGGTAGCTCTTATTGGTGAGAAGTTAGAAGTGTTGACCCAACAAATATCCCGTGCAGCTGGTTCTTACCAAGAAATAGAAAAGAGGAGACAACAAATCTCGGCTTGTGAGCTAATGAAGAAAGCCTTGGTTCCCGAGTTTGGGTGGTGTATGGAACAAAAACGGGTTGTGGAGTCTCTTGAAGGCAAGATAAATGAGTTGGAAAGACAATTGGCATCCTTGAAACAAGAGAGAGAAGAAGTGGGGGAAAAGCTCCTTCAGAGGAGTAAGCAGTGTTTCCAAAGTCAAGGACAACTGAAGAAGATAGAGGCCGATTTGAAAGCTTCCGAGCCTAGGTGTATGCAACTTGAGAGTGACCTTCAGGCCACTAGTTGTACCTTGGGAGCTCTTAATGATTTATTAGCCGAGGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

267

Amino Acids

29.71

Weight (kDa)

4.91

Isoelectric Point (pI)

56.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000063)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21382 FvH4_1g29794 FvH4_1g29795 FvH4_2g35573 FvH4_2g35574 FvH4_4g18552 FvH4_5g16044
malus_domestica MD05G1017000.v1.1
prunus_persica Prupe.3G140800_v2.0.a1 Prupe.6G164100_v2.0.a1
pyrus_communis pycom01g04330 pycom03g19820 pycom04g06720 pycom06g11360 pycom06g19000 pycom10g08100 pycom13g16660 pycom13g27590 pycom13g27640 pycom13g27890 pycom16g11770 pycom16g19530
rosa_chinensis RchiOBHm_Chr1g0317341 RchiOBHm_Chr1g0317351 RchiOBHm_Chr1g0320431 RchiOBHm_Chr1g0320711 RchiOBHm_Chr1g0320721 RchiOBHm_Chr1g0321611 RchiOBHm_Chr1g0321621 RchiOBHm_Chr1g0321631 RchiOBHm_Chr1g0323651 RchiOBHm_Chr1g0332991 RchiOBHm_Chr1g0333001 RchiOBHm_Chr1g0335981 RchiOBHm_Chr1g0335991 RchiOBHm_Chr1g0336001 RchiOBHm_Chr1g0350201 RchiOBHm_Chr1g0368201 RchiOBHm_Chr2g0105531 RchiOBHm_Chr2g0105541 RchiOBHm_Chr2g0116571 RchiOBHm_Chr2g0116581 RchiOBHm_Chr2g0121071 RchiOBHm_Chr2g0131351 RchiOBHm_Chr2g0131661 RchiOBHm_Chr2g0133021 RchiOBHm_Chr2g0138181 RchiOBHm_Chr2g0138191 RchiOBHm_Chr2g0142701 RchiOBHm_Chr2g0142711 RchiOBHm_Chr2g0152981 RchiOBHm_Chr3g0456181 RchiOBHm_Chr3g0456191 RchiOBHm_Chr3g0493631 RchiOBHm_Chr3g0496201 RchiOBHm_Chr4g0401541 RchiOBHm_Chr4g0410311 RchiOBHm_Chr4g0410321 RchiOBHm_Chr4g0419231 RchiOBHm_Chr4g0419511 RchiOBHm_Chr4g0419521 RchiOBHm_Chr5g0004311 RchiOBHm_Chr5g0004321 RchiOBHm_Chr5g0038131 RchiOBHm_Chr5g0038251 RchiOBHm_Chr5g0038261 RchiOBHm_Chr5g0038271 RchiOBHm_Chr5g0052241 RchiOBHm_Chr5g0053911 RchiOBHm_Chr5g0074641 RchiOBHm_Chr5g0076651 RchiOBHm_Chr5g0076661 RchiOBHm_Chr6g0249161 RchiOBHm_Chr6g0249171 RchiOBHm_Chr6g0250961 RchiOBHm_Chr6g0253701 RchiOBHm_Chr6g0262131 RchiOBHm_Chr6g0263181 RchiOBHm_Chr6g0263231 RchiOBHm_Chr6g0263241 RchiOBHm_Chr6g0263251 RchiOBHm_Chr6g0291271 RchiOBHm_Chr7g0194611 RchiOBHm_Chr7g0219691 RchiOBHm_Chr7g0219701 RchiOBHm_Chr7g0225431 RchiOBHm_Chr7g0234221 RchiOBHm_Chr7g0238711 RchiOBHm_Chr7g0238721 RchiOBHm_Chr7g0238731 RchiOBHm_Chr7g0239611 RchiOBHm_Chr7g0239621
rosa_laevigata RLG00000001361 RLG00000001376 RLG00000001860 RLG00000002051 RLG00000002362 RLG00000008940 RLG00000012764 RLG00000018782 RLG00000029639 RLG00000030151
rosa_multiflora Rmu_co8090794.1_g000001 Rmu_co8135356.1_g000001 Rmu_co8224968.1_g000001 Rmu_sc0000016.1_g000020 Rmu_sc0000029.1_g000061 Rmu_sc0000035.1_g000032 Rmu_sc0000060.1_g000041 Rmu_sc0000148.1_g000041 Rmu_sc0000315.1_g000084 Rmu_sc0000527.1_g000005 Rmu_sc0000527.1_g000007 Rmu_sc0000527.1_g000008 Rmu_sc0000648.1_g000002 Rmu_sc0000762.1_g000076 Rmu_sc0000870.1_g000003 Rmu_sc0000870.1_g000004 Rmu_sc0000948.1_g000037 Rmu_sc0000997.1_g000003 Rmu_sc0001047.1_g000041 Rmu_sc0001047.1_g000042 Rmu_sc0001075.1_g000044 Rmu_sc0001174.1_g000006 Rmu_sc0001235.1_g000025 Rmu_sc0001292.1_g000008 Rmu_sc0001301.1_g000038 Rmu_sc0001461.1_g000069 Rmu_sc0001461.1_g000070 Rmu_sc0001669.1_g000041 Rmu_sc0001689.1_g000027 Rmu_sc0001896.1_g000008 Rmu_sc0001909.1_g000013 Rmu_sc0002170.1_g000038 Rmu_sc0002200.1_g000014 Rmu_sc0002283.1_g000027 Rmu_sc0002284.1_g000014 Rmu_sc0002294.1_g000017 Rmu_sc0002294.1_g000018 Rmu_sc0002307.1_g000020 Rmu_sc0002307.1_g000021 Rmu_sc0002307.1_g000023 Rmu_sc0002357.1_g000054 Rmu_sc0002409.1_g000005 Rmu_sc0002535.1_g000002 Rmu_sc0002589.1_g000014 Rmu_sc0002759.1_g000016 Rmu_sc0002759.1_g000017 Rmu_sc0002777.1_g000015 Rmu_sc0002824.1_g000016 Rmu_sc0002872.1_g000005 Rmu_sc0002872.1_g000012 Rmu_sc0002872.1_g000013 Rmu_sc0002942.1_g000019 Rmu_sc0003337.1_g000001 Rmu_sc0003410.1_g000052 Rmu_sc0003445.1_g000010 Rmu_sc0003773.1_g000007 Rmu_sc0003773.1_g000008 Rmu_sc0003895.1_g000002 Rmu_sc0004063.1_g000006 Rmu_sc0004088.1_g000009 Rmu_sc0004088.1_g000010 Rmu_sc0004174.1_g000027 Rmu_sc0004196.1_g000010 Rmu_sc0004515.1_g000006 Rmu_sc0004727.1_g000010 Rmu_sc0004755.1_g000018 Rmu_sc0005016.1_g000030 Rmu_sc0005026.1_g000001 Rmu_sc0005044.1_g000007 Rmu_sc0005284.1_g000001 Rmu_sc0005431.1_g000030 Rmu_sc0005802.1_g000014 Rmu_sc0005802.1_g000015 Rmu_sc0005994.1_g000004 Rmu_sc0005994.1_g000005 Rmu_sc0006059.1_g000048 Rmu_sc0006583.1_g000013 Rmu_sc0006824.1_g000009 Rmu_sc0007458.1_g000005 Rmu_sc0007707.1_g000002 Rmu_sc0008242.1_g000012 Rmu_sc0008713.1_g000006 Rmu_sc0008770.1_g000008 Rmu_sc0009785.1_g000004 Rmu_sc0009785.1_g000005 Rmu_sc0010125.1_g000001 Rmu_sc0010211.1_g000004 Rmu_sc0011034.1_g000001 Rmu_sc0011833.1_g000006 Rmu_sc0014851.1_g000001 Rmu_sc0014899.1_g000001 Rmu_sc0015060.1_g000003 Rmu_sc0015186.1_g000001 Rmu_sc0015248.1_g000003 Rmu_sc0015248.1_g000004 Rmu_sc0015314.1_g000001 Rmu_sc0018098.1_g000002 Rmu_sc0022706.1_g000004 Rmu_sc0023350.1_g000002 Rmu_sc0027636.1_g000001 Rmu_sc0027672.1_g000003 Rmu_sc0030879.1_g000001 Rmu_ssc0000008.1_g000029 Rmu_ssc0000019.1_g000014 Rmu_ssc0000050.1_g000082 Rmu_ssc0000282.1_g000004 Rmu_ssc0000311.1_g000010
rosa_roxburghii Rroxscaffold_1G00015190 Rroxscaffold_1G00031880 Rroxscaffold_1G00031890 Rroxscaffold_1G00059310 Rroxscaffold_1G00060420 Rroxscaffold_1G00067930 Rroxscaffold_1G00075030 Rroxscaffold_2G00082210 Rroxscaffold_2G00122970 Rroxscaffold_3G00218230 Rroxscaffold_3G00219020 Rroxscaffold_3G00219030 Rroxscaffold_3G00223680 Rroxscaffold_3G00223690 Rroxscaffold_3G00223700 Rroxscaffold_3G00226870 Rroxscaffold_3G00226880 Rroxscaffold_3G00232990 Rroxscaffold_3G00265610 Rroxscaffold_3G00265620 Rroxscaffold_3G00265630 Rroxscaffold_4G00318660 Rroxscaffold_4G00319060 Rroxscaffold_4G00323500 Rroxscaffold_5G00357520 Rroxscaffold_5G00366150 Rroxscaffold_5G00377470 Rroxscaffold_6G00395700 Rroxscaffold_6G00413950 Rroxscaffold_7G00187650 Rroxscaffold_7G00198290 Rroxscaffold_7G00198300 Rroxscaffold_7G00208060
rosa_rugosa Rorug01G0173900 Rorug01G0174000 Rorug01G0174100 Rorug01G0174100 Rorug02G0341200 Rorug04G0135700 Rorug04G0135800 Rorug05G0032500 Rorug06G0021800
rosa_samantha Rh1AG036600 Rh1AG245800 Rh1CG021700 Rh1CG021800 Rh1CG085800 Rh1CG085900 Rh1CG187900 Rh1CG229600 Rh1CG239600 Rh1CG246500 Rh1CG246600 Rh2BG478100 Rh2DG341300 Rh2DG366600 Rh2DG375700 Rh2DG384300 Rh2DG487000 Rh2DG504000 Rh2DG504100 Rh3AG311800 Rh3AG327500 Rh3AG328300 Rh3BG345100 Rh3CG320100 Rh4AG005700 Rh4AG067900 Rh4AG068000 Rh4AG084400 Rh4AG106700 Rh4AG160000 Rh4AG173900 Rh4AG174000 Rh4CG125300 Rh4CG125500 Rh4CG264500 Rh4DG110800 Rh5AG047300 Rh5AG085200 Rh5AG126300 Rh5AG127300 Rh5AG203000 Rh5AG332400 Rh5AG332500 Rh5AG342400 Rh5AG344100 Rh5AG375600 Rh5AG378300 Rh5AG386000 Rh5AG529600 Rh5BG125200 Rh5CG137600 Rh5CG137700 Rh5DG125200 Rh6BG134100 Rh6BG175400 Rh6BG179500 Rh6BG179600 Rh6BG181600 Rh6BG181700 Rh6BG191100 Rh6BG232900 Rh6BG259700 Rh6BG259800 Rh7AG028000 Rh7AG319400 Rh7AG352700 Rh7AG352800 Rh7AG352900 Rh7AG482500 Rh7AG482600 Rh7AG503800 Rh7BG334700 Rh7CG200100 Rh7CG336200 Rh7CG370200 Rh7CG370400 Rh7CG370500
rosa_wichuraiana Rw1G001580 Rw1G003570 Rw1G004260 Rw1G004270 Rw1G021170 Rw2G019390 Rw2G040280 Rw2G044050 Rw4G004430 Rw5G010950 Rw5G018350 Rw5G032890 Rw6G002840 Rw6G006510 Rw6G007780 Rw6G033790 Rw7G036320 Rw7G040550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 4 cut(s) 180, 213, 231, 348
AcsI RAATTY 1 cut(s) 311
AcuI CTGAAG 4 cut(s) 140, 632, 707, 734
AdeI CACNNNGTG 1 cut(s) 109
AfaI GTAC 1 cut(s) 766
AfiI CCNNNNNNNGG 5 cut(s) 112, 391, 530, 531, 723
AgsI TTSAA 6 cut(s) 63, 146, 274, 572, 613, 709
AhlI ACTAGT 1 cut(s) 758
AjnI CCWGG 1 cut(s) 105
AjuI GAANNNNNNNTTGG 2 cut(s) 500, 532
AluBI AGCT 6 cut(s) 398, 449, 502, 643, 713, 776
AluI AGCT 6 cut(s) 398, 449, 502, 643, 713, 776
Alw21I GWGCWC 2 cut(s) 51, 778
Alw26I GTCTC 2 cut(s) 472, 570
Ama87I CYCGRG 1 cut(s) 524
AoxI GGCC 7 cut(s) 180, 213, 231, 325, 348, 699, 753
ApeKI GCWGC 3 cut(s) 207, 298, 446
ApoI RAATTY 1 cut(s) 311
AspA2I CCTAGG 1 cut(s) 722
AsuHPI GGTGA 2 cut(s) 43, 419
AvaI CYCGRG 1 cut(s) 524
AvrII CCTAGG 1 cut(s) 722
BalI TGGCCA 1 cut(s) 350
BanII GRGCYC 1 cut(s) 778
Bbv12I GWGCWC 2 cut(s) 51, 778
BbvI GCAGC 3 cut(s) 194, 310, 458
BccI CCATC 1 cut(s) 257
BciT130I CCWGG 1 cut(s) 107
BcoDI GTCTC 2 cut(s) 472, 570
BcuI ACTAGT 1 cut(s) 758
BfaI CTAG 3 cut(s) 125, 723, 759
BisI GCNGC 3 cut(s) 208, 299, 447
BlnI CCTAGG 1 cut(s) 722
BlsI GCNGC 3 cut(s) 209, 300, 448
Bme1390I CCNGG 1 cut(s) 107
BmeT110I CYCGRG 1 cut(s) 524
BmiI GGNNCC 2 cut(s) 370, 522
BmrFI CCNGG 1 cut(s) 107
BmsI GCATC 2 cut(s) 175, 614
BpuEI CTTGAG 1 cut(s) 758
BsaJI CCNNGG 6 cut(s) 351, 390, 516, 722, 768, 795
Bsc4I CCNNNNNNNGG 5 cut(s) 112, 391, 530, 531, 723
Bse118I RCCGGY 1 cut(s) 229
Bse1I ACTGG 1 cut(s) 72
BseBI CCWGG 1 cut(s) 107
BseDI CCNNGG 6 cut(s) 351, 390, 516, 722, 768, 795
BseGI GGATG 1 cut(s) 605
BseLI CCNNNNNNNGG 5 cut(s) 112, 391, 530, 531, 723
BseNI ACTGG 1 cut(s) 72
BseRI GAGGAG 3 cut(s) 73, 490, 667
BseX3I CGGCCG 1 cut(s) 180
BseXI GCAGC 3 cut(s) 194, 310, 458
BsgI GTGCAG 1 cut(s) 465
Bsh1285I CGRYCG 1 cut(s) 183
BshFI GGCC 7 cut(s) 182, 215, 233, 327, 350, 701, 755
BsiEI CGRYCG 1 cut(s) 183
BsiHKAI GWGCWC 2 cut(s) 51, 778
BsiHKCI CYCGRG 1 cut(s) 524
BsiSI CCGG 1 cut(s) 230
BslI CCNNNNNNNGG 5 cut(s) 112, 391, 530, 531, 723
BsmAI GTCTC 2 cut(s) 472, 570
BsmI GAATGC 1 cut(s) 209
BsnI GGCC 7 cut(s) 182, 215, 233, 327, 350, 701, 755
BsoBI CYCGRG 1 cut(s) 524
Bsp1286I GDGCHC 2 cut(s) 51, 778
Bsp19I CCATGG 1 cut(s) 351
BspANI GGCC 7 cut(s) 182, 215, 233, 327, 350, 701, 755
BspHI TCATGA 1 cut(s) 165
BspLI GGNNCC 2 cut(s) 370, 522
BsrFI RCCGGY 1 cut(s) 229
BsrI ACTGG 1 cut(s) 72
BssAI RCCGGY 1 cut(s) 229
BssECI CCNNGG 6 cut(s) 351, 390, 516, 722, 768, 795
BssT1I CCWWGG 5 cut(s) 351, 390, 516, 722, 768
Bst2UI CCWGG 1 cut(s) 107
BstC8I GCNNGC 1 cut(s) 69
BstDSI CCRYGG 1 cut(s) 351
BstF5I GGATG 1 cut(s) 605
BstMAI GTCTC 2 cut(s) 472, 570
BstMCI CGRYCG 1 cut(s) 183
BstMWI GCNNNNNNNGC 1 cut(s) 179
BstNI CCWGG 1 cut(s) 107
BstSCI CCNGG 1 cut(s) 105
BstV1I GCAGC 3 cut(s) 194, 310, 458
BstZI CGGCCG 1 cut(s) 180
BsuRI GGCC 7 cut(s) 182, 215, 233, 327, 350, 701, 755
BtgI CCRYGG 1 cut(s) 351
BtsCI GGATG 1 cut(s) 605
BtsI GCAGTG 1 cut(s) 668
BtsIMutI CAGTG 1 cut(s) 668
Cac8I GCNNGC 1 cut(s) 69
CciI TCATGA 1 cut(s) 165
Cfr10I RCCGGY 1 cut(s) 229
CsiI ACCWGGT 1 cut(s) 105
Csp6I GTAC 1 cut(s) 765
CviAII CATG 2 cut(s) 166, 352
CviQI GTAC 1 cut(s) 765
DraIII CACNNNGTG 1 cut(s) 109
EaeI YGGCCR 4 cut(s) 180, 213, 231, 348
EagI CGGCCG 1 cut(s) 180
Ecl136II GAGCTC 1 cut(s) 776
EclXI CGGCCG 1 cut(s) 180
Eco130I CCWWGG 5 cut(s) 351, 390, 516, 722, 768
Eco24I GRGCYC 1 cut(s) 778
Eco52I CGGCCG 1 cut(s) 180
Eco53kI GAGCTC 1 cut(s) 776
Eco57I CTGAAG 4 cut(s) 140, 632, 707, 734
Eco88I CYCGRG 1 cut(s) 524
EcoICRI GAGCTC 1 cut(s) 776
EcoRII CCWGG 1 cut(s) 105
EcoT14I CCWWGG 5 cut(s) 351, 390, 516, 722, 768
EcoT38I GRGCYC 1 cut(s) 778
ErhI CCWWGG 5 cut(s) 351, 390, 516, 722, 768
FaeI CATG 2 cut(s) 169, 355
FaiI YATR 5 cut(s) 32, 167, 353, 542, 731
FalI AAGNNNNNCTT 6 cut(s) 27, 59, 138, 170, 500, 532
FatI CATG 2 cut(s) 165, 351
Fnu4HI GCNGC 3 cut(s) 208, 299, 447
FokI GGATG 1 cut(s) 592
FriOI GRGCYC 1 cut(s) 778
Fsp4HI GCNGC 3 cut(s) 208, 299, 447
FspBI CTAG 3 cut(s) 125, 723, 759
GluI GCNGC 3 cut(s) 208, 299, 447
HaeIII GGCC 7 cut(s) 182, 215, 233, 327, 350, 701, 755
HapII CCGG 1 cut(s) 230
Hin1II CATG 2 cut(s) 169, 355
HincII GTYRAC 2 cut(s) 294, 426
HindII GTYRAC 2 cut(s) 294, 426
HindIII AAGCTT 1 cut(s) 711
HinfI GANTC 1 cut(s) 563
HpaI GTTAAC 1 cut(s) 294
HpaII CCGG 1 cut(s) 230
HphI GGTGA 2 cut(s) 43, 419
Hpy166II GTNNAC 2 cut(s) 294, 426
Hpy188I TCNGA 2 cut(s) 651, 718
Hpy188III TCNNGA 3 cut(s) 166, 524, 569
Hpy8I GTNNAC 2 cut(s) 294, 426
Hpy99I CGWCG 1 cut(s) 91
HpyAV CCTTC 4 cut(s) 268, 566, 656, 758
HpyCH4V TGCA 3 cut(s) 223, 446, 733
HpyF10VI GCNNNNNNNGC 1 cut(s) 179
Hsp92II CATG 2 cut(s) 169, 355
KspAI GTTAAC 1 cut(s) 294
LmnI GCTCC 3 cut(s) 368, 648, 773
LpnPI CCDG 9 cut(s) 85, 92, 119, 143, 213, 243, 309, 435, 737
Lsp1109I GCAGC 3 cut(s) 194, 310, 458
LweI GCATC 2 cut(s) 175, 614
MabI ACCWGGT 1 cut(s) 105
MaeI CTAG 3 cut(s) 125, 723, 759
MaeIII GTNAC 4 cut(s) 19, 225, 360, 743
MboII GAAGA 5 cut(s) 47, 520, 638, 700, 703
MfeI CAATTG 2 cut(s) 239, 599
MhlI GDGCHC 2 cut(s) 51, 778
MlsI TGGCCA 1 cut(s) 350
MluCI AATT 4 cut(s) 239, 258, 311, 599
MluNI TGGCCA 1 cut(s) 350
MlyI GAGTC 1 cut(s) 572
MmeI TCCRAC 2 cut(s) 220, 570
MnlI CCTC 9 cut(s) 91, 94, 162, 247, 396, 468, 645, 691, 790
Mox20I TGGCCA 1 cut(s) 350
MscI TGGCCA 1 cut(s) 350
MseI TTAA 3 cut(s) 293, 305, 780
Msp20I TGGCCA 1 cut(s) 350
MspA1I CMGCKG 1 cut(s) 449
MspI CCGG 1 cut(s) 230
MspR9I CCNGG 1 cut(s) 107
MunI CAATTG 2 cut(s) 239, 599
Mva1269I GAATGC 1 cut(s) 209
MvaI CCWGG 1 cut(s) 107
MwoI GCNNNNNNNGC 1 cut(s) 179
NcoI CCATGG 1 cut(s) 351
NlaIII CATG 2 cut(s) 169, 355
NlaIV GGNNCC 2 cut(s) 370, 522
NmeAIII GCCGAG 2 cut(s) 191, 470
NmuCI GTSAC 2 cut(s) 19, 743
PagI TCATGA 1 cut(s) 165
PctI GAATGC 1 cut(s) 209
PkrI GCNGC 3 cut(s) 209, 300, 448
PleI GAGTC 1 cut(s) 571
PpsI GAGTC 1 cut(s) 571
Psp124BI GAGCTC 1 cut(s) 778
Psp6I CCWGG 1 cut(s) 105
PspGI CCWGG 1 cut(s) 105
PspN4I GGNNCC 2 cut(s) 370, 522
PvuII CAGCTG 1 cut(s) 449
RsaI GTAC 1 cut(s) 766
RsaNI GTAC 1 cut(s) 765
SacI GAGCTC 1 cut(s) 778
SaqAI TTAA 3 cut(s) 293, 305, 780
SatI GCNGC 3 cut(s) 208, 299, 447
SchI GAGTC 1 cut(s) 572
ScrFI CCNGG 1 cut(s) 107
SduI GDGCHC 2 cut(s) 51, 778
SexAI ACCWGGT 1 cut(s) 105
SfaNI GCATC 2 cut(s) 175, 614
SmlI CTYRAG 1 cut(s) 737
SmoI CTYRAG 1 cut(s) 737
SpeI ACTAGT 1 cut(s) 758
Sse9I AATT 4 cut(s) 239, 258, 311, 599
SspMI CTAG 3 cut(s) 125, 723, 759
SstI GAGCTC 1 cut(s) 778
StyD4I CCNGG 1 cut(s) 105
StyI CCWWGG 5 cut(s) 351, 390, 516, 722, 768
TasI AATT 4 cut(s) 239, 258, 311, 599
Tru1I TTAA 3 cut(s) 293, 305, 780
Tru9I TTAA 3 cut(s) 293, 305, 780
TscAI CASTG 1 cut(s) 668
TseFI GTSAC 2 cut(s) 19, 743
TseI GCWGC 3 cut(s) 207, 298, 446
Tsp45I GTSAC 2 cut(s) 19, 743
TspDTI ATGAA 3 cut(s) 135, 154, 521
TspRI CASTG 1 cut(s) 668
XapI RAATTY 1 cut(s) 311
XmaJI CCTAGG 1 cut(s) 722
XspI CTAG 3 cut(s) 125, 723, 759
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.