Rmu_sc0004196.1_g000010

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004196.1
OG0000063
Physical Location & Seq
Reverse (-)
14977 .. 17796
2820 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004196.1_g000010.1.cds

Sequence Viewer

Length: 1878 bp
atgaatagaataacacaacgagtcccgaatgaaggtggggtacgtcaacttggcccaagtttccatagtgatatgccggccgatgtggaaaaagttttgagccagcatgaagtcgatgattctagctacttcagtgaaggaaaagcatggggaacatggggaacaaaaccaggaaaatggcctggtgaaacggccaactggattccgtgggtagaacgagtcaagaagcgatttggggaaatatggaaacgacttgggatctatgactcgggcagaccagccgttgctaattttaatacatggattgaggtgtttaacaacggtttgggaaataagtcacttaatagtaatggcagtccagaagagaaaggggaaagccaacaggagacactggaagtaacttatgtagagcatgctgcgtttctcgccttttggatatgtaagttcttagtgtgcacaacttctaaaaaagtgaatgtggagtactacaagttggctgaagcattagcaagtaaagagttgtggctgcacacttactttccctctttcagacagccgggtttagcattggtcgttgacaccactcttggacaacaattggctcctcttgatttacttcctcattcggcagaagagtgttttgaggtgttgttcaaatttccagagttttctgcagaacagtttgccatttgttttagtaggaagtattcaccctaccttgcaatggatatcagccaacacgcctcagaaagtgagacgagatgggagactgtgtgttcagcttggaagagtgcaataggtatgagggatctcttctggggtgccttgtctggtaaaacactcaagtgtggagtggagttatattcaccatcctatttcaatcgtcagttgggatattatcaagctacaccggctccggtgccggaatcgtcaaaccgatatagttcattgcgagccgttttctccaataaggacgacattaagcagaataacaaggcgtttgtgtacaacatgagctttcccacgaagacaagagtagcaactagtaagagttcctcccagttcagagagtggtgggcgaaacgagtaggtagccgctttaaagatgggttggtgtcggctaggcaatcggcttttgcaggaaatccatgggcacaagagaagccgaaagctataaggcgtggtaaaataacaagcaaagtagctaaagcaatcctaactataaccgaacttcaggctttcatgagggcattttcggccgatgctctaattcaatcagaatgctgctcggccatttcgcagttaccgaccgctcaattgacatcaagggaggaaattgatggggctctgaaggtggtaaaggaaacgttagcgcagccattagaagaatttgtggaaacaggccaactatcaaaagtgaaagtggccatggatttgttgcttggagccaaatactttgcccctcccaaggtagctctcattggtgagaagttagaagtgttgacccaacaaatatcccgtgtagctggttcttaccaagaaatagaaaaaaggagacaacaaatcttggcttgtgagcaaatgaagaaagccttggttcccgagtttgggtggtgtatggaacaaaaacgggttgtggagtcttttgaaggcaagataaatgagttggaaagacaattggcatccttgaagcaagagagacaagaagtgggggaaaaactccttcaaaggagtaagcagtgtttccaaagccaaggacaactgaaaaaaatagaggctgaattgaaaagttctgagcctaggtgtatgcaacttgagagtgaccttcaggacactagttgtaccttgggagctcttaaatctttattagccgagtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

625

Amino Acids

70.52

Weight (kDa)

8.66

Isoelectric Point (pI)

48.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000063)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21382 FvH4_1g29794 FvH4_1g29795 FvH4_2g35573 FvH4_2g35574 FvH4_4g18552 FvH4_5g16044
malus_domestica MD05G1017000.v1.1
prunus_persica Prupe.3G140800_v2.0.a1 Prupe.6G164100_v2.0.a1
pyrus_communis pycom01g04330 pycom03g19820 pycom04g06720 pycom06g11360 pycom06g19000 pycom10g08100 pycom13g16660 pycom13g27590 pycom13g27640 pycom13g27890 pycom16g11770 pycom16g19530
rosa_chinensis RchiOBHm_Chr1g0317341 RchiOBHm_Chr1g0317351 RchiOBHm_Chr1g0320431 RchiOBHm_Chr1g0320711 RchiOBHm_Chr1g0320721 RchiOBHm_Chr1g0321611 RchiOBHm_Chr1g0321621 RchiOBHm_Chr1g0321631 RchiOBHm_Chr1g0323651 RchiOBHm_Chr1g0332991 RchiOBHm_Chr1g0333001 RchiOBHm_Chr1g0335981 RchiOBHm_Chr1g0335991 RchiOBHm_Chr1g0336001 RchiOBHm_Chr1g0350201 RchiOBHm_Chr1g0368201 RchiOBHm_Chr2g0105531 RchiOBHm_Chr2g0105541 RchiOBHm_Chr2g0116571 RchiOBHm_Chr2g0116581 RchiOBHm_Chr2g0121071 RchiOBHm_Chr2g0131351 RchiOBHm_Chr2g0131661 RchiOBHm_Chr2g0133021 RchiOBHm_Chr2g0138181 RchiOBHm_Chr2g0138191 RchiOBHm_Chr2g0142701 RchiOBHm_Chr2g0142711 RchiOBHm_Chr2g0152981 RchiOBHm_Chr3g0456181 RchiOBHm_Chr3g0456191 RchiOBHm_Chr3g0493631 RchiOBHm_Chr3g0496201 RchiOBHm_Chr4g0401541 RchiOBHm_Chr4g0410311 RchiOBHm_Chr4g0410321 RchiOBHm_Chr4g0419231 RchiOBHm_Chr4g0419511 RchiOBHm_Chr4g0419521 RchiOBHm_Chr5g0004311 RchiOBHm_Chr5g0004321 RchiOBHm_Chr5g0038131 RchiOBHm_Chr5g0038251 RchiOBHm_Chr5g0038261 RchiOBHm_Chr5g0038271 RchiOBHm_Chr5g0052241 RchiOBHm_Chr5g0053911 RchiOBHm_Chr5g0074641 RchiOBHm_Chr5g0076651 RchiOBHm_Chr5g0076661 RchiOBHm_Chr6g0249161 RchiOBHm_Chr6g0249171 RchiOBHm_Chr6g0250961 RchiOBHm_Chr6g0253701 RchiOBHm_Chr6g0262131 RchiOBHm_Chr6g0263181 RchiOBHm_Chr6g0263231 RchiOBHm_Chr6g0263241 RchiOBHm_Chr6g0263251 RchiOBHm_Chr6g0291271 RchiOBHm_Chr7g0194611 RchiOBHm_Chr7g0219691 RchiOBHm_Chr7g0219701 RchiOBHm_Chr7g0225431 RchiOBHm_Chr7g0234221 RchiOBHm_Chr7g0238711 RchiOBHm_Chr7g0238721 RchiOBHm_Chr7g0238731 RchiOBHm_Chr7g0239611 RchiOBHm_Chr7g0239621
rosa_laevigata RLG00000001361 RLG00000001376 RLG00000001860 RLG00000002051 RLG00000002362 RLG00000008940 RLG00000012764 RLG00000018782 RLG00000029639 RLG00000030151
rosa_multiflora Rmu_co8090794.1_g000001 Rmu_co8135356.1_g000001 Rmu_co8224968.1_g000001 Rmu_sc0000016.1_g000020 Rmu_sc0000029.1_g000061 Rmu_sc0000035.1_g000032 Rmu_sc0000060.1_g000041 Rmu_sc0000148.1_g000041 Rmu_sc0000315.1_g000084 Rmu_sc0000527.1_g000005 Rmu_sc0000527.1_g000007 Rmu_sc0000527.1_g000008 Rmu_sc0000648.1_g000002 Rmu_sc0000762.1_g000076 Rmu_sc0000870.1_g000003 Rmu_sc0000870.1_g000004 Rmu_sc0000948.1_g000037 Rmu_sc0000997.1_g000003 Rmu_sc0001047.1_g000041 Rmu_sc0001047.1_g000042 Rmu_sc0001075.1_g000044 Rmu_sc0001174.1_g000006 Rmu_sc0001235.1_g000025 Rmu_sc0001292.1_g000008 Rmu_sc0001301.1_g000038 Rmu_sc0001461.1_g000069 Rmu_sc0001461.1_g000070 Rmu_sc0001669.1_g000041 Rmu_sc0001689.1_g000027 Rmu_sc0001896.1_g000008 Rmu_sc0001909.1_g000013 Rmu_sc0002170.1_g000038 Rmu_sc0002200.1_g000014 Rmu_sc0002283.1_g000027 Rmu_sc0002284.1_g000014 Rmu_sc0002294.1_g000017 Rmu_sc0002294.1_g000018 Rmu_sc0002307.1_g000020 Rmu_sc0002307.1_g000021 Rmu_sc0002307.1_g000023 Rmu_sc0002357.1_g000054 Rmu_sc0002409.1_g000005 Rmu_sc0002535.1_g000002 Rmu_sc0002589.1_g000014 Rmu_sc0002759.1_g000016 Rmu_sc0002759.1_g000017 Rmu_sc0002777.1_g000015 Rmu_sc0002824.1_g000016 Rmu_sc0002872.1_g000005 Rmu_sc0002872.1_g000012 Rmu_sc0002872.1_g000013 Rmu_sc0002942.1_g000019 Rmu_sc0003337.1_g000001 Rmu_sc0003410.1_g000052 Rmu_sc0003445.1_g000010 Rmu_sc0003773.1_g000007 Rmu_sc0003773.1_g000008 Rmu_sc0003895.1_g000002 Rmu_sc0004063.1_g000006 Rmu_sc0004088.1_g000009 Rmu_sc0004088.1_g000010 Rmu_sc0004174.1_g000027 Rmu_sc0004196.1_g000010 Rmu_sc0004515.1_g000006 Rmu_sc0004727.1_g000010 Rmu_sc0004755.1_g000018 Rmu_sc0005016.1_g000030 Rmu_sc0005026.1_g000001 Rmu_sc0005044.1_g000007 Rmu_sc0005284.1_g000001 Rmu_sc0005431.1_g000030 Rmu_sc0005802.1_g000014 Rmu_sc0005802.1_g000015 Rmu_sc0005994.1_g000004 Rmu_sc0005994.1_g000005 Rmu_sc0006059.1_g000048 Rmu_sc0006583.1_g000013 Rmu_sc0006824.1_g000009 Rmu_sc0007458.1_g000005 Rmu_sc0007707.1_g000002 Rmu_sc0008242.1_g000012 Rmu_sc0008713.1_g000006 Rmu_sc0008770.1_g000008 Rmu_sc0009785.1_g000004 Rmu_sc0009785.1_g000005 Rmu_sc0010125.1_g000001 Rmu_sc0010211.1_g000004 Rmu_sc0011034.1_g000001 Rmu_sc0011833.1_g000006 Rmu_sc0014851.1_g000001 Rmu_sc0014899.1_g000001 Rmu_sc0015060.1_g000003 Rmu_sc0015186.1_g000001 Rmu_sc0015248.1_g000003 Rmu_sc0015248.1_g000004 Rmu_sc0015314.1_g000001 Rmu_sc0018098.1_g000002 Rmu_sc0022706.1_g000004 Rmu_sc0023350.1_g000002 Rmu_sc0027636.1_g000001 Rmu_sc0027672.1_g000003 Rmu_sc0030879.1_g000001 Rmu_ssc0000008.1_g000029 Rmu_ssc0000019.1_g000014 Rmu_ssc0000050.1_g000082 Rmu_ssc0000282.1_g000004 Rmu_ssc0000311.1_g000010
rosa_roxburghii Rroxscaffold_1G00015190 Rroxscaffold_1G00031880 Rroxscaffold_1G00031890 Rroxscaffold_1G00059310 Rroxscaffold_1G00060420 Rroxscaffold_1G00067930 Rroxscaffold_1G00075030 Rroxscaffold_2G00082210 Rroxscaffold_2G00122970 Rroxscaffold_3G00218230 Rroxscaffold_3G00219020 Rroxscaffold_3G00219030 Rroxscaffold_3G00223680 Rroxscaffold_3G00223690 Rroxscaffold_3G00223700 Rroxscaffold_3G00226870 Rroxscaffold_3G00226880 Rroxscaffold_3G00232990 Rroxscaffold_3G00265610 Rroxscaffold_3G00265620 Rroxscaffold_3G00265630 Rroxscaffold_4G00318660 Rroxscaffold_4G00319060 Rroxscaffold_4G00323500 Rroxscaffold_5G00357520 Rroxscaffold_5G00366150 Rroxscaffold_5G00377470 Rroxscaffold_6G00395700 Rroxscaffold_6G00413950 Rroxscaffold_7G00187650 Rroxscaffold_7G00198290 Rroxscaffold_7G00198300 Rroxscaffold_7G00208060
rosa_rugosa Rorug01G0173900 Rorug01G0174000 Rorug01G0174100 Rorug01G0174100 Rorug02G0341200 Rorug04G0135700 Rorug04G0135800 Rorug05G0032500 Rorug06G0021800
rosa_samantha Rh1AG036600 Rh1AG245800 Rh1CG021700 Rh1CG021800 Rh1CG085800 Rh1CG085900 Rh1CG187900 Rh1CG229600 Rh1CG239600 Rh1CG246500 Rh1CG246600 Rh2BG478100 Rh2DG341300 Rh2DG366600 Rh2DG375700 Rh2DG384300 Rh2DG487000 Rh2DG504000 Rh2DG504100 Rh3AG311800 Rh3AG327500 Rh3AG328300 Rh3BG345100 Rh3CG320100 Rh4AG005700 Rh4AG067900 Rh4AG068000 Rh4AG084400 Rh4AG106700 Rh4AG160000 Rh4AG173900 Rh4AG174000 Rh4CG125300 Rh4CG125500 Rh4CG264500 Rh4DG110800 Rh5AG047300 Rh5AG085200 Rh5AG126300 Rh5AG127300 Rh5AG203000 Rh5AG332400 Rh5AG332500 Rh5AG342400 Rh5AG344100 Rh5AG375600 Rh5AG378300 Rh5AG386000 Rh5AG529600 Rh5BG125200 Rh5CG137600 Rh5CG137700 Rh5DG125200 Rh6BG134100 Rh6BG175400 Rh6BG179500 Rh6BG179600 Rh6BG181600 Rh6BG181700 Rh6BG191100 Rh6BG232900 Rh6BG259700 Rh6BG259800 Rh7AG028000 Rh7AG319400 Rh7AG352700 Rh7AG352800 Rh7AG352900 Rh7AG482500 Rh7AG482600 Rh7AG503800 Rh7BG334700 Rh7CG200100 Rh7CG336200 Rh7CG370200 Rh7CG370400 Rh7CG370500
rosa_wichuraiana Rw1G001580 Rw1G003570 Rw1G004260 Rw1G004270 Rw1G021170 Rw2G019390 Rw2G040280 Rw2G044050 Rw4G004430 Rw5G010950 Rw5G018350 Rw5G032890 Rw6G002840 Rw6G006510 Rw6G007780 Rw6G033790 Rw7G036320 Rw7G040550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 821, 919
AccBSI CCGCTC 1 cut(s) 1313
AciI CCGC 2 cut(s) 1096, 1311
AclI AACGTT 1 cut(s) 1367
AclWI GGATC 2 cut(s) 266, 816
AcoI YGGCCR 5 cut(s) 78, 192, 1257, 1290, 1425
AcsI RAATTY 2 cut(s) 656, 1388
AcuI CTGAAG 5 cut(s) 115, 519, 1217, 1370, 1811
AfaI GTAC 4 cut(s) 42, 485, 1007, 1843
AfiI CCNNNNNNNGG 5 cut(s) 32, 724, 1468, 1607, 1608
AgsI TTSAA 7 cut(s) 655, 880, 1274, 1649, 1690, 1727, 1786
AhlI ACTAGT 2 cut(s) 1043, 1835
AjnI CCWGG 2 cut(s) 169, 181
AjuI GAANNNNNNNTTGG 2 cut(s) 1577, 1609
AleI CACNNNNGTG 1 cut(s) 844
AluBI AGCT 9 cut(s) 126, 782, 905, 1017, 1172, 1205, 1475, 1526, 1853
AluI AGCT 9 cut(s) 126, 782, 905, 1017, 1172, 1205, 1475, 1526, 1853
Alw21I GWGCWC 2 cut(s) 458, 1855
Alw26I GTCTC 5 cut(s) 380, 749, 761, 1549, 1693
Alw44I GTGCAC 1 cut(s) 454
AlwI GGATC 2 cut(s) 266, 816
Ama87I CYCGRG 2 cut(s) 268, 1601
AoxI GGCC 8 cut(s) 52, 78, 179, 192, 1257, 1290, 1402, 1425
ApaLI GTGCAC 1 cut(s) 454
ApeKI GCWGC 4 cut(s) 416, 526, 1284, 1375
ApoI RAATTY 2 cut(s) 656, 1388
AspA2I CCTAGG 1 cut(s) 1799
AspLEI GCGC 1 cut(s) 1375
AspS9I GGNCC 1 cut(s) 53
AsuC2I CCSGG 1 cut(s) 558
AsuHPI GGTGA 4 cut(s) 197, 702, 858, 1496
AvaI CYCGRG 2 cut(s) 268, 1601
AvrII CCTAGG 1 cut(s) 1799
BaeGI GKGCMC 2 cut(s) 458, 1156
BalI TGGCCA 1 cut(s) 1427
BanI GGYRCC 2 cut(s) 821, 919
BanII GRGCYC 2 cut(s) 1348, 1855
BarI GAAGNNNNNNTAC 2 cut(s) 24, 56
BbsI GAAGAC 1 cut(s) 1034
Bbv12I GWGCWC 2 cut(s) 458, 1855
BbvI GCAGC 4 cut(s) 403, 513, 1271, 1387
BccI CCATC 4 cut(s) 756, 877, 1100, 1334
BceAI ACGGC 3 cut(s) 207, 266, 941
BciT130I CCWGG 2 cut(s) 171, 183
BcnI CCSGG 1 cut(s) 558
BcoDI GTCTC 5 cut(s) 380, 749, 761, 1549, 1693
BcuI ACTAGT 2 cut(s) 1043, 1835
BfaI CTAG 5 cut(s) 123, 1044, 1122, 1800, 1836
BfmI CTRYAG 1 cut(s) 672
BisI GCNGC 5 cut(s) 417, 527, 1096, 1285, 1376
BlnI CCTAGG 1 cut(s) 1799
BlsI GCNGC 5 cut(s) 418, 528, 1097, 1286, 1377
BmcAI AGTACT 1 cut(s) 485
Bme1390I CCNGG 3 cut(s) 171, 183, 558
BmeT110I CYCGRG 2 cut(s) 268, 1601
BmgT120I GGNCC 1 cut(s) 53
BmiI GGNNCC 6 cut(s) 603, 823, 915, 921, 1447, 1599
BmrFI CCNGG 3 cut(s) 171, 183, 558
BmrI ACTGGG 1 cut(s) 1054
BmsI GCATC 2 cut(s) 1252, 1691
BmuI ACTGGG 1 cut(s) 1054
BpiI GAAGAC 1 cut(s) 1034
BpuEI CTTGAG 2 cut(s) 827, 1835
BpuMI CCSGG 1 cut(s) 558
BsaJI CCNNGG 8 cut(s) 206, 1148, 1428, 1467, 1593, 1753, 1799, 1845
BsaWI WCCGGW 1 cut(s) 916
BsaXI ACNNNNNCTCC 4 cut(s) 758, 788, 898, 928
Bsc4I CCNNNNNNNGG 5 cut(s) 32, 724, 1468, 1607, 1608
Bse118I RCCGGY 2 cut(s) 76, 910
Bse1I ACTGG 3 cut(s) 203, 396, 1060
Bse3DI GCAATG 2 cut(s) 729, 947
BseBI CCWGG 2 cut(s) 171, 183
BseDI CCNNGG 8 cut(s) 206, 1148, 1428, 1467, 1593, 1753, 1799, 1845
BseGI GGATG 2 cut(s) 869, 1682
BseLI CCNNNNNNNGG 5 cut(s) 32, 724, 1468, 1607, 1608
BseMI GCAATG 2 cut(s) 729, 947
BseMII CTCAG 2 cut(s) 759, 1785
BseNI ACTGG 3 cut(s) 203, 396, 1060
BseRI GAGGAG 1 cut(s) 594
BseSI GKGCMC 2 cut(s) 458, 1156
BseX3I CGGCCG 2 cut(s) 78, 1257
BseXI GCAGC 4 cut(s) 403, 513, 1271, 1387
BsgI GTGCAG 1 cut(s) 512
Bsh1285I CGRYCG 3 cut(s) 81, 1260, 1311
BshFI GGCC 8 cut(s) 54, 80, 181, 194, 1259, 1292, 1404, 1427
BshNI GGYRCC 2 cut(s) 821, 919
BsiEI CGRYCG 3 cut(s) 81, 1260, 1311
BsiHKAI GWGCWC 2 cut(s) 458, 1855
BsiHKCI CYCGRG 2 cut(s) 268, 1601
BsiSI CCGG 5 cut(s) 77, 557, 911, 917, 923
BslFI GGGAC 1 cut(s) 8
BslI CCNNNNNNNGG 5 cut(s) 32, 724, 1468, 1607, 1608
BsmAI GTCTC 5 cut(s) 380, 749, 761, 1549, 1693
BsmBI CGTCTC 1 cut(s) 749
BsmFI GGGAC 1 cut(s) 8
BsmI GAATGC 1 cut(s) 1286
BsnI GGCC 8 cut(s) 54, 80, 181, 194, 1259, 1292, 1404, 1427
BsoBI CYCGRG 2 cut(s) 268, 1601
Bsp1286I GDGCHC 4 cut(s) 458, 1156, 1348, 1855
Bsp1407I TGTACA 1 cut(s) 1005
Bsp143I GATC 2 cut(s) 258, 808
Bsp19I CCATGG 2 cut(s) 1148, 1428
BspACI CCGC 2 cut(s) 1096, 1311
BspANI GGCC 8 cut(s) 54, 80, 181, 194, 1259, 1292, 1404, 1427
BspCNI CTCAG 2 cut(s) 758, 1786
BspHI TCATGA 1 cut(s) 1242
BspLI GGNNCC 6 cut(s) 603, 823, 915, 921, 1447, 1599
BspMAI CTGCAG 1 cut(s) 676
BspPI GGATC 2 cut(s) 266, 816
BspT107I GGYRCC 2 cut(s) 821, 919
BsrBI CCGCTC 1 cut(s) 1313
BsrDI GCAATG 2 cut(s) 729, 947
BsrFI RCCGGY 2 cut(s) 76, 910
BsrGI TGTACA 1 cut(s) 1005
BsrI ACTGG 3 cut(s) 203, 396, 1060
BssAI RCCGGY 2 cut(s) 76, 910
BssECI CCNNGG 8 cut(s) 206, 1148, 1428, 1467, 1593, 1753, 1799, 1845
BssMI GATC 2 cut(s) 258, 808
BssT1I CCWWGG 7 cut(s) 1148, 1428, 1467, 1593, 1753, 1799, 1845
Bst2UI CCWGG 2 cut(s) 171, 183
Bst4CI ACNGT 3 cut(s) 323, 681, 772
Bst6I CTCTTC 4 cut(s) 357, 627, 782, 818
BstAUI TGTACA 1 cut(s) 1005
BstC8I GCNNGC 4 cut(s) 78, 104, 414, 954
BstDEI CTNAG 3 cut(s) 448, 745, 1794
BstDSI CCRYGG 3 cut(s) 206, 1148, 1428
BstF5I GGATG 2 cut(s) 869, 1682
BstHHI GCGC 1 cut(s) 1375
BstKTI GATC 2 cut(s) 261, 811
BstMAI GTCTC 5 cut(s) 380, 749, 761, 1549, 1693
BstMBI GATC 2 cut(s) 258, 808
BstMCI CGRYCG 3 cut(s) 81, 1260, 1311
BstMWI GCNNNNNNNGC 3 cut(s) 425, 911, 1256
BstNI CCWGG 2 cut(s) 171, 183
BstNSI RCATGY 1 cut(s) 416
BstSCI CCNGG 3 cut(s) 169, 181, 556
BstSFI CTRYAG 1 cut(s) 672
BstSLI GKGCMC 2 cut(s) 458, 1156
BstV1I GCAGC 4 cut(s) 403, 513, 1271, 1387
BstV2I GAAGAC 1 cut(s) 1034
BstX2I RGATCY 2 cut(s) 258, 808
BstXI CCANNNNNNTGG 1 cut(s) 177
BstYI RGATCY 2 cut(s) 258, 808
BstZI CGGCCG 2 cut(s) 78, 1257
BsuRI GGCC 8 cut(s) 54, 80, 181, 194, 1259, 1292, 1404, 1427
BtgI CCRYGG 3 cut(s) 206, 1148, 1428
BtsCI GGATG 2 cut(s) 869, 1682
BtsI GCAGTG 1 cut(s) 1745
BtsIMutI CAGTG 3 cut(s) 139, 389, 1745
Cac8I GCNNGC 4 cut(s) 78, 104, 414, 954
CciI TCATGA 1 cut(s) 1242
CfoI GCGC 1 cut(s) 1375
Cfr10I RCCGGY 2 cut(s) 76, 910
Cfr13I GGNCC 1 cut(s) 53
Csp6I GTAC 4 cut(s) 41, 484, 1006, 1842
CviAII CATG 9 cut(s) 107, 147, 156, 300, 413, 1012, 1149, 1243, 1429
CviQI GTAC 4 cut(s) 41, 484, 1006, 1842
DdeI CTNAG 3 cut(s) 448, 745, 1794
DpnI GATC 2 cut(s) 260, 810
DpnII GATC 2 cut(s) 258, 808
DraI TTTAAA 1 cut(s) 1102
EaeI YGGCCR 5 cut(s) 78, 192, 1257, 1290, 1425
EagI CGGCCG 2 cut(s) 78, 1257
Eam1104I CTCTTC 4 cut(s) 357, 627, 782, 818
EarI CTCTTC 4 cut(s) 357, 627, 782, 818
Ecl136II GAGCTC 1 cut(s) 1853
EclXI CGGCCG 2 cut(s) 78, 1257
Eco130I CCWWGG 7 cut(s) 1148, 1428, 1467, 1593, 1753, 1799, 1845
Eco24I GRGCYC 2 cut(s) 1348, 1855
Eco32I GATATC 1 cut(s) 730
Eco52I CGGCCG 2 cut(s) 78, 1257
Eco53kI GAGCTC 1 cut(s) 1853
Eco57I CTGAAG 5 cut(s) 115, 519, 1217, 1370, 1811
Eco88I CYCGRG 2 cut(s) 268, 1601
EcoICRI GAGCTC 1 cut(s) 1853
EcoRII CCWGG 2 cut(s) 169, 181
EcoRV GATATC 1 cut(s) 730
EcoT14I CCWWGG 7 cut(s) 1148, 1428, 1467, 1593, 1753, 1799, 1845
EcoT38I GRGCYC 2 cut(s) 1348, 1855
ErhI CCWWGG 7 cut(s) 1148, 1428, 1467, 1593, 1753, 1799, 1845
Esp3I CGTCTC 1 cut(s) 749
FaeI CATG 9 cut(s) 110, 150, 159, 303, 416, 1015, 1152, 1246, 1432
FalI AAGNNNNNCTT 2 cut(s) 1577, 1609
FaqI GGGAC 1 cut(s) 8
FatI CATG 9 cut(s) 106, 146, 155, 299, 412, 1011, 1148, 1242, 1428
Fnu4HI GCNGC 5 cut(s) 417, 527, 1096, 1285, 1376
FokI GGATG 2 cut(s) 856, 1669
FriOI GRGCYC 2 cut(s) 1348, 1855
Fsp4HI GCNGC 5 cut(s) 417, 527, 1096, 1285, 1376
FspBI CTAG 5 cut(s) 123, 1044, 1122, 1800, 1836
GlaI GCGC 1 cut(s) 1374
GluI GCNGC 5 cut(s) 417, 527, 1096, 1285, 1376
HaeIII GGCC 8 cut(s) 54, 80, 181, 194, 1259, 1292, 1404, 1427
HapII CCGG 5 cut(s) 77, 557, 911, 917, 923
HhaI GCGC 1 cut(s) 1375
Hin1II CATG 9 cut(s) 110, 150, 159, 303, 416, 1015, 1152, 1246, 1432
Hin6I GCGC 1 cut(s) 1373
HinP1I GCGC 1 cut(s) 1373
HincII GTYRAC 3 cut(s) 47, 577, 1503
HindII GTYRAC 3 cut(s) 47, 577, 1503
HinfI GANTC 7 cut(s) 21, 119, 202, 219, 266, 926, 1640
HpaII CCGG 5 cut(s) 77, 557, 911, 917, 923
HphI GGTGA 4 cut(s) 197, 702, 858, 1496
Hpy166II GTNNAC 5 cut(s) 47, 456, 577, 1006, 1503
Hpy188I TCNGA 6 cut(s) 551, 748, 1067, 1279, 1350, 1795
Hpy188III TCNNGA 8 cut(s) 25, 223, 359, 608, 662, 1243, 1601, 1829
Hpy8I GTNNAC 5 cut(s) 47, 456, 577, 1006, 1503
HpyAV CCTTC 6 cut(s) 26, 131, 1345, 1643, 1733, 1835
HpyCH4III ACNGT 3 cut(s) 323, 681, 772
HpyCH4IV ACGT 2 cut(s) 43, 1367
HpyCH4V TGCA 7 cut(s) 456, 529, 674, 722, 794, 1139, 1810
HpyF10VI GCNNNNNNNGC 3 cut(s) 425, 911, 1256
HpyF3I CTNAG 3 cut(s) 448, 745, 1794
HpySE526I ACGT 2 cut(s) 43, 1367
Hsp92II CATG 9 cut(s) 110, 150, 159, 303, 416, 1015, 1152, 1246, 1432
HspAI GCGC 1 cut(s) 1373
KroI GCCGGC 1 cut(s) 76
KroNI GCCGGC 1 cut(s) 78
Kzo9I GATC 2 cut(s) 258, 808
LmnI GCTCC 4 cut(s) 607, 919, 1445, 1850
Lsp1109I GCAGC 4 cut(s) 403, 513, 1271, 1387
LweI GCATC 2 cut(s) 1252, 1691
MaeI CTAG 5 cut(s) 123, 1044, 1122, 1800, 1836
MaeII ACGT 2 cut(s) 43, 1367
MaeIII GTNAC 4 cut(s) 336, 397, 1302, 1820
MalI GATC 2 cut(s) 260, 810
MbiI CCGCTC 1 cut(s) 1313
MboI GATC 2 cut(s) 258, 808
MboII GAAGA 7 cut(s) 374, 644, 799, 805, 1039, 1397, 1597
MfeI CAATTG 3 cut(s) 596, 1316, 1676
MflI RGATCY 2 cut(s) 258, 808
MhlI GDGCHC 4 cut(s) 458, 1156, 1348, 1855
MlsI TGGCCA 1 cut(s) 1427
MluCI AATT 9 cut(s) 289, 596, 656, 1269, 1316, 1335, 1388, 1676, 1781
MluNI TGGCCA 1 cut(s) 1427
MlyI GAGTC 4 cut(s) 30, 228, 260, 1649
MmeI TCCRAC 1 cut(s) 1647
Mox20I TGGCCA 1 cut(s) 1427
MroNI GCCGGC 1 cut(s) 76
MscI TGGCCA 1 cut(s) 1427
MseI TTAA 6 cut(s) 294, 315, 342, 981, 1101, 1857
MslI CAYNNNNRTG 1 cut(s) 844
Msp20I TGGCCA 1 cut(s) 1427
MspI CCGG 5 cut(s) 77, 557, 911, 917, 923
MspR9I CCNGG 3 cut(s) 171, 183, 558
MunI CAATTG 3 cut(s) 596, 1316, 1676
Mva1269I GAATGC 1 cut(s) 1286
MvaI CCWGG 2 cut(s) 171, 183
MwoI GCNNNNNNNGC 3 cut(s) 425, 911, 1256
NaeI GCCGGC 1 cut(s) 78
NciI CCSGG 1 cut(s) 558
NcoI CCATGG 2 cut(s) 1148, 1428
NdeII GATC 2 cut(s) 258, 808
NgoMIV GCCGGC 1 cut(s) 76
NlaIII CATG 9 cut(s) 110, 150, 159, 303, 416, 1015, 1152, 1246, 1432
NlaIV GGNNCC 6 cut(s) 603, 823, 915, 921, 1447, 1599
NmeAIII GCCGAG 1 cut(s) 1268
NmuCI GTSAC 2 cut(s) 336, 1820
NspI RCATGY 1 cut(s) 416
OliI CACNNNNGTG 1 cut(s) 844
PaeI GCATGC 1 cut(s) 416
PagI TCATGA 1 cut(s) 1242
PcsI WCGNNNNNNNCGW 1 cut(s) 1304
PctI GAATGC 1 cut(s) 1286
PdiI GCCGGC 1 cut(s) 78
PfeI GAWTC 3 cut(s) 119, 202, 926
PkrI GCNGC 5 cut(s) 418, 528, 1097, 1286, 1377
PleI GAGTC 4 cut(s) 29, 227, 260, 1648
PpsI GAGTC 4 cut(s) 29, 227, 260, 1648
Psp124BI GAGCTC 1 cut(s) 1855
Psp1406I AACGTT 1 cut(s) 1367
Psp6I CCWGG 2 cut(s) 169, 181
PspGI CCWGG 2 cut(s) 169, 181
PspN4I GGNNCC 6 cut(s) 603, 823, 915, 921, 1447, 1599
PspPI GGNCC 1 cut(s) 53
PstI CTGCAG 1 cut(s) 676
PsuI RGATCY 2 cut(s) 258, 808
RsaI GTAC 4 cut(s) 42, 485, 1007, 1843
RsaNI GTAC 4 cut(s) 41, 484, 1006, 1842
RseI CAYNNNNRTG 1 cut(s) 844
SacI GAGCTC 1 cut(s) 1855
SaqAI TTAA 6 cut(s) 294, 315, 342, 981, 1101, 1857
SatI GCNGC 5 cut(s) 417, 527, 1096, 1285, 1376
Sau3AI GATC 2 cut(s) 258, 808
Sau96I GGNCC 1 cut(s) 53
ScaI AGTACT 1 cut(s) 485
SchI GAGTC 4 cut(s) 30, 228, 260, 1649
ScrFI CCNGG 3 cut(s) 171, 183, 558
SduI GDGCHC 4 cut(s) 458, 1156, 1348, 1855
SfaNI GCATC 2 cut(s) 1252, 1691
SfcI CTRYAG 1 cut(s) 672
SmiMI CAYNNNNRTG 1 cut(s) 844
SmlI CTYRAG 2 cut(s) 842, 1814
SmoI CTYRAG 2 cut(s) 842, 1814
SpeI ACTAGT 2 cut(s) 1043, 1835
SphI GCATGC 1 cut(s) 416
Sse9I AATT 9 cut(s) 289, 596, 656, 1269, 1316, 1335, 1388, 1676, 1781
SsiI CCGC 2 cut(s) 1096, 1311
SspMI CTAG 5 cut(s) 123, 1044, 1122, 1800, 1836
SstI GAGCTC 1 cut(s) 1855
StyD4I CCNGG 3 cut(s) 169, 181, 556
StyI CCWWGG 7 cut(s) 1148, 1428, 1467, 1593, 1753, 1799, 1845
TaaI ACNGT 3 cut(s) 323, 681, 772
TaiI ACGT 2 cut(s) 46, 1370
TaqI TCGA 1 cut(s) 114
TasI AATT 9 cut(s) 289, 596, 656, 1269, 1316, 1335, 1388, 1676, 1781
TatI WGTACW 2 cut(s) 483, 1005
TauI GCSGC 1 cut(s) 1098
TfiI GAWTC 3 cut(s) 119, 202, 926
Tru1I TTAA 6 cut(s) 294, 315, 342, 981, 1101, 1857
Tru9I TTAA 6 cut(s) 294, 315, 342, 981, 1101, 1857
TscAI CASTG 3 cut(s) 139, 396, 1745
TseFI GTSAC 2 cut(s) 336, 1820
TseI GCWGC 4 cut(s) 416, 526, 1284, 1375
Tsp45I GTSAC 2 cut(s) 336, 1820
TspDTI ATGAA 6 cut(s) 17, 45, 123, 936, 1231, 1598
TspGWI ACGGA 1 cut(s) 195
TspRI CASTG 3 cut(s) 139, 396, 1745
VneI GTGCAC 1 cut(s) 454
XapI RAATTY 2 cut(s) 656, 1388
XceI RCATGY 1 cut(s) 416
XmaJI CCTAGG 1 cut(s) 1799
XspI CTAG 5 cut(s) 123, 1044, 1122, 1800, 1836
ZrmI AGTACT 1 cut(s) 485
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.