Rmu_sc0006824.1_g000009

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006824.1
OG0000063
Physical Location & Seq
Forward (+)
60926 .. 64424
3499 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006824.1_g000009.1.cds

Sequence Viewer

Length: 1596 bp
atgtgtttttggagttctcaaacaaacactctggagcttcagtttggtgcacttagtccgaccttgattgatatagcggccattataggcctgccgccacatgggcaaggggtggacatcgtatttgcagaaggaaagtgtgacattgatcttggctgcgagctaagggatcgaactaagggcagaccagccgttgctaattttaatacatggattgaggtgtttaacaacggtttgggaaataagtcacttgatagtaatggcagtccagaagagaaaggggaaagccagcaggagacaatggaagtaactcatgtagagcatgctgcatttcttgccttttggatatgtaagttcttagtgtgcacaacttctaaaaaagtgaatgtggagtactacaagttggctaaaacattagcaagtaaagaagtacaagagagcgatcagccattagctcttggtccatttgtgcttgcccacttatacagatgtcttcaccactgcgtgaccaaaggactgaatccaaattggtctgggccattgtggatttttcagttgtggctacacacttactttccctttttcagacagccgggtgtagcattggccgtagacaccactcttggacaacaattggctcctcttgatttacttcctcattcggcagaagagtgttttgaggtgttgttcaagtgtctagagttttctgcagaacagtttaccgtttgtttcagtaggaagtatccaccctaccttgcaatggatatcagccaacacgcctcagaaagtgagacgagatgggagactgcgtgttcagcttggaagagtgcaataggtatgagggatctcttctggggtgccttgtctggtaaaacactcaagtgtggagtggagttatattcaccatcctatttcagtcgtcagttgggatattatcaagctataccagctctggtgccagaatcgtcaaaccgatatagttcattgcgagctgttttcttcaacaaggacgacattgagcagaataacaaggcgtttgtgtacaacatgagctttcccatgaagacaagagtagcaactagcaagagttcctcccagttcagagagtggtgggagaaacgagtaggtagccgctttaaagatgggttggaatgtaatcaggggtttgaagccgaacttcaggcttttatgagggcattttcggccgatgctctaatccaaccagaatgctgctcggccattttgcagttaccgcccgctcaattgacatcaagggaggaaattgatggggctttgaaggtggtaaaggaaacgtcagagcagccattaaaagaatttgtggaaacaagccaactatcaaaagtgaaagtggtcatggacttgttacttggagccaaatactttgcccctcccaaggtagctttcattgctatgaataccgatcctcggtcagttgttatagtttctggaataccgaagcgccccgaaaaggccatggcttcactattggattcatggggaaagcaggaactctctgaatggacccgtgaagttggcatggagcacaacctcgggcatactcaatacagtctttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

531

Amino Acids

59.7

Weight (kDa)

5.86

Isoelectric Point (pI)

41.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000063)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21382 FvH4_1g29794 FvH4_1g29795 FvH4_2g35573 FvH4_2g35574 FvH4_4g18552 FvH4_5g16044
malus_domestica MD05G1017000.v1.1
prunus_persica Prupe.3G140800_v2.0.a1 Prupe.6G164100_v2.0.a1
pyrus_communis pycom01g04330 pycom03g19820 pycom04g06720 pycom06g11360 pycom06g19000 pycom10g08100 pycom13g16660 pycom13g27590 pycom13g27640 pycom13g27890 pycom16g11770 pycom16g19530
rosa_chinensis RchiOBHm_Chr1g0317341 RchiOBHm_Chr1g0317351 RchiOBHm_Chr1g0320431 RchiOBHm_Chr1g0320711 RchiOBHm_Chr1g0320721 RchiOBHm_Chr1g0321611 RchiOBHm_Chr1g0321621 RchiOBHm_Chr1g0321631 RchiOBHm_Chr1g0323651 RchiOBHm_Chr1g0332991 RchiOBHm_Chr1g0333001 RchiOBHm_Chr1g0335981 RchiOBHm_Chr1g0335991 RchiOBHm_Chr1g0336001 RchiOBHm_Chr1g0350201 RchiOBHm_Chr1g0368201 RchiOBHm_Chr2g0105531 RchiOBHm_Chr2g0105541 RchiOBHm_Chr2g0116571 RchiOBHm_Chr2g0116581 RchiOBHm_Chr2g0121071 RchiOBHm_Chr2g0131351 RchiOBHm_Chr2g0131661 RchiOBHm_Chr2g0133021 RchiOBHm_Chr2g0138181 RchiOBHm_Chr2g0138191 RchiOBHm_Chr2g0142701 RchiOBHm_Chr2g0142711 RchiOBHm_Chr2g0152981 RchiOBHm_Chr3g0456181 RchiOBHm_Chr3g0456191 RchiOBHm_Chr3g0493631 RchiOBHm_Chr3g0496201 RchiOBHm_Chr4g0401541 RchiOBHm_Chr4g0410311 RchiOBHm_Chr4g0410321 RchiOBHm_Chr4g0419231 RchiOBHm_Chr4g0419511 RchiOBHm_Chr4g0419521 RchiOBHm_Chr5g0004311 RchiOBHm_Chr5g0004321 RchiOBHm_Chr5g0038131 RchiOBHm_Chr5g0038251 RchiOBHm_Chr5g0038261 RchiOBHm_Chr5g0038271 RchiOBHm_Chr5g0052241 RchiOBHm_Chr5g0053911 RchiOBHm_Chr5g0074641 RchiOBHm_Chr5g0076651 RchiOBHm_Chr5g0076661 RchiOBHm_Chr6g0249161 RchiOBHm_Chr6g0249171 RchiOBHm_Chr6g0250961 RchiOBHm_Chr6g0253701 RchiOBHm_Chr6g0262131 RchiOBHm_Chr6g0263181 RchiOBHm_Chr6g0263231 RchiOBHm_Chr6g0263241 RchiOBHm_Chr6g0263251 RchiOBHm_Chr6g0291271 RchiOBHm_Chr7g0194611 RchiOBHm_Chr7g0219691 RchiOBHm_Chr7g0219701 RchiOBHm_Chr7g0225431 RchiOBHm_Chr7g0234221 RchiOBHm_Chr7g0238711 RchiOBHm_Chr7g0238721 RchiOBHm_Chr7g0238731 RchiOBHm_Chr7g0239611 RchiOBHm_Chr7g0239621
rosa_laevigata RLG00000001361 RLG00000001376 RLG00000001860 RLG00000002051 RLG00000002362 RLG00000008940 RLG00000012764 RLG00000018782 RLG00000029639 RLG00000030151
rosa_multiflora Rmu_co8090794.1_g000001 Rmu_co8135356.1_g000001 Rmu_co8224968.1_g000001 Rmu_sc0000016.1_g000020 Rmu_sc0000029.1_g000061 Rmu_sc0000035.1_g000032 Rmu_sc0000060.1_g000041 Rmu_sc0000148.1_g000041 Rmu_sc0000315.1_g000084 Rmu_sc0000527.1_g000005 Rmu_sc0000527.1_g000007 Rmu_sc0000527.1_g000008 Rmu_sc0000648.1_g000002 Rmu_sc0000762.1_g000076 Rmu_sc0000870.1_g000003 Rmu_sc0000870.1_g000004 Rmu_sc0000948.1_g000037 Rmu_sc0000997.1_g000003 Rmu_sc0001047.1_g000041 Rmu_sc0001047.1_g000042 Rmu_sc0001075.1_g000044 Rmu_sc0001174.1_g000006 Rmu_sc0001235.1_g000025 Rmu_sc0001292.1_g000008 Rmu_sc0001301.1_g000038 Rmu_sc0001461.1_g000069 Rmu_sc0001461.1_g000070 Rmu_sc0001669.1_g000041 Rmu_sc0001689.1_g000027 Rmu_sc0001896.1_g000008 Rmu_sc0001909.1_g000013 Rmu_sc0002170.1_g000038 Rmu_sc0002200.1_g000014 Rmu_sc0002283.1_g000027 Rmu_sc0002284.1_g000014 Rmu_sc0002294.1_g000017 Rmu_sc0002294.1_g000018 Rmu_sc0002307.1_g000020 Rmu_sc0002307.1_g000021 Rmu_sc0002307.1_g000023 Rmu_sc0002357.1_g000054 Rmu_sc0002409.1_g000005 Rmu_sc0002535.1_g000002 Rmu_sc0002589.1_g000014 Rmu_sc0002759.1_g000016 Rmu_sc0002759.1_g000017 Rmu_sc0002777.1_g000015 Rmu_sc0002824.1_g000016 Rmu_sc0002872.1_g000005 Rmu_sc0002872.1_g000012 Rmu_sc0002872.1_g000013 Rmu_sc0002942.1_g000019 Rmu_sc0003337.1_g000001 Rmu_sc0003410.1_g000052 Rmu_sc0003445.1_g000010 Rmu_sc0003773.1_g000007 Rmu_sc0003773.1_g000008 Rmu_sc0003895.1_g000002 Rmu_sc0004063.1_g000006 Rmu_sc0004088.1_g000009 Rmu_sc0004088.1_g000010 Rmu_sc0004174.1_g000027 Rmu_sc0004196.1_g000010 Rmu_sc0004515.1_g000006 Rmu_sc0004727.1_g000010 Rmu_sc0004755.1_g000018 Rmu_sc0005016.1_g000030 Rmu_sc0005026.1_g000001 Rmu_sc0005044.1_g000007 Rmu_sc0005284.1_g000001 Rmu_sc0005431.1_g000030 Rmu_sc0005802.1_g000014 Rmu_sc0005802.1_g000015 Rmu_sc0005994.1_g000004 Rmu_sc0005994.1_g000005 Rmu_sc0006059.1_g000048 Rmu_sc0006583.1_g000013 Rmu_sc0006824.1_g000009 Rmu_sc0007458.1_g000005 Rmu_sc0007707.1_g000002 Rmu_sc0008242.1_g000012 Rmu_sc0008713.1_g000006 Rmu_sc0008770.1_g000008 Rmu_sc0009785.1_g000004 Rmu_sc0009785.1_g000005 Rmu_sc0010125.1_g000001 Rmu_sc0010211.1_g000004 Rmu_sc0011034.1_g000001 Rmu_sc0011833.1_g000006 Rmu_sc0014851.1_g000001 Rmu_sc0014899.1_g000001 Rmu_sc0015060.1_g000003 Rmu_sc0015186.1_g000001 Rmu_sc0015248.1_g000003 Rmu_sc0015248.1_g000004 Rmu_sc0015314.1_g000001 Rmu_sc0018098.1_g000002 Rmu_sc0022706.1_g000004 Rmu_sc0023350.1_g000002 Rmu_sc0027636.1_g000001 Rmu_sc0027672.1_g000003 Rmu_sc0030879.1_g000001 Rmu_ssc0000008.1_g000029 Rmu_ssc0000019.1_g000014 Rmu_ssc0000050.1_g000082 Rmu_ssc0000282.1_g000004 Rmu_ssc0000311.1_g000010
rosa_roxburghii Rroxscaffold_1G00015190 Rroxscaffold_1G00031880 Rroxscaffold_1G00031890 Rroxscaffold_1G00059310 Rroxscaffold_1G00060420 Rroxscaffold_1G00067930 Rroxscaffold_1G00075030 Rroxscaffold_2G00082210 Rroxscaffold_2G00122970 Rroxscaffold_3G00218230 Rroxscaffold_3G00219020 Rroxscaffold_3G00219030 Rroxscaffold_3G00223680 Rroxscaffold_3G00223690 Rroxscaffold_3G00223700 Rroxscaffold_3G00226870 Rroxscaffold_3G00226880 Rroxscaffold_3G00232990 Rroxscaffold_3G00265610 Rroxscaffold_3G00265620 Rroxscaffold_3G00265630 Rroxscaffold_4G00318660 Rroxscaffold_4G00319060 Rroxscaffold_4G00323500 Rroxscaffold_5G00357520 Rroxscaffold_5G00366150 Rroxscaffold_5G00377470 Rroxscaffold_6G00395700 Rroxscaffold_6G00413950 Rroxscaffold_7G00187650 Rroxscaffold_7G00198290 Rroxscaffold_7G00198300 Rroxscaffold_7G00208060
rosa_rugosa Rorug01G0173900 Rorug01G0174000 Rorug01G0174100 Rorug01G0174100 Rorug02G0341200 Rorug04G0135700 Rorug04G0135800 Rorug05G0032500 Rorug06G0021800
rosa_samantha Rh1AG036600 Rh1AG245800 Rh1CG021700 Rh1CG021800 Rh1CG085800 Rh1CG085900 Rh1CG187900 Rh1CG229600 Rh1CG239600 Rh1CG246500 Rh1CG246600 Rh2BG478100 Rh2DG341300 Rh2DG366600 Rh2DG375700 Rh2DG384300 Rh2DG487000 Rh2DG504000 Rh2DG504100 Rh3AG311800 Rh3AG327500 Rh3AG328300 Rh3BG345100 Rh3CG320100 Rh4AG005700 Rh4AG067900 Rh4AG068000 Rh4AG084400 Rh4AG106700 Rh4AG160000 Rh4AG173900 Rh4AG174000 Rh4CG125300 Rh4CG125500 Rh4CG264500 Rh4DG110800 Rh5AG047300 Rh5AG085200 Rh5AG126300 Rh5AG127300 Rh5AG203000 Rh5AG332400 Rh5AG332500 Rh5AG342400 Rh5AG344100 Rh5AG375600 Rh5AG378300 Rh5AG386000 Rh5AG529600 Rh5BG125200 Rh5CG137600 Rh5CG137700 Rh5DG125200 Rh6BG134100 Rh6BG175400 Rh6BG179500 Rh6BG179600 Rh6BG181600 Rh6BG181700 Rh6BG191100 Rh6BG232900 Rh6BG259700 Rh6BG259800 Rh7AG028000 Rh7AG319400 Rh7AG352700 Rh7AG352800 Rh7AG352900 Rh7AG482500 Rh7AG482600 Rh7AG503800 Rh7BG334700 Rh7CG200100 Rh7CG336200 Rh7CG370200 Rh7CG370400 Rh7CG370500
rosa_wichuraiana Rw1G001580 Rw1G003570 Rw1G004260 Rw1G004270 Rw1G021170 Rw2G019390 Rw2G040280 Rw2G044050 Rw4G004430 Rw5G010950 Rw5G018350 Rw5G032890 Rw6G002840 Rw6G006510 Rw6G007780 Rw6G033790 Rw7G036320 Rw7G040550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 857, 955
AccBSI CCGCTC 1 cut(s) 1259
AccI GTMKAC 1 cut(s) 612
AciI CCGC 5 cut(s) 77, 95, 1132, 1253, 1257
AclWI GGATC 3 cut(s) 177, 852, 1436
AcoI YGGCCR 4 cut(s) 78, 606, 1203, 1236
AcsI RAATTY 1 cut(s) 1334
AcuI CTGAAG 2 cut(s) 23, 1163
AdeI CACNNNGTG 1 cut(s) 505
AfaI GTAC 3 cut(s) 395, 432, 1043
AfiI CCNNNNNNNGG 5 cut(s) 101, 760, 1414, 1446, 1489
AgsI TTSAA 4 cut(s) 691, 1003, 1169, 1297
AjuI GAANNNNNNNTTGG 2 cut(s) 1406, 1438
AleI CACNNNNGTG 1 cut(s) 880
AluBI AGCT 9 cut(s) 37, 163, 455, 818, 941, 950, 992, 1053, 1421
AluI AGCT 9 cut(s) 37, 163, 455, 818, 941, 950, 992, 1053, 1421
Alw21I GWGCWC 3 cut(s) 52, 368, 1566
Alw26I GTCTC 3 cut(s) 290, 785, 797
Alw44I GTGCAC 2 cut(s) 48, 364
AlwI GGATC 3 cut(s) 177, 852, 1436
Ama87I CYCGRG 1 cut(s) 1571
AoxI GGCC 7 cut(s) 78, 88, 536, 606, 1203, 1236, 1491
ApaLI GTGCAC 2 cut(s) 48, 364
ApeKI GCWGC 4 cut(s) 156, 326, 1230, 1321
ApoI RAATTY 1 cut(s) 1334
ArsI GACNNNNNNTTYG 2 cut(s) 107, 139
AspLEI GCGC 1 cut(s) 1482
AspS9I GGNCC 3 cut(s) 461, 536, 1542
AsuC2I CCSGG 1 cut(s) 594
AsuHPI GGTGA 2 cut(s) 488, 894
AvaI CYCGRG 1 cut(s) 1571
AvaII GGWCC 2 cut(s) 461, 1542
BaeGI GKGCMC 2 cut(s) 52, 368
BanI GGYRCC 2 cut(s) 857, 955
BbsI GAAGAC 2 cut(s) 485, 1070
Bbv12I GWGCWC 3 cut(s) 52, 368, 1566
BbvI GCAGC 4 cut(s) 143, 313, 1217, 1333
BccI CCATC 4 cut(s) 792, 913, 1136, 1280
BceAI ACGGC 2 cut(s) 176, 593
BciVI GTATCC 1 cut(s) 753
BcnI CCSGG 1 cut(s) 594
BcoDI GTCTC 3 cut(s) 290, 785, 797
BfaI CTAG 2 cut(s) 698, 1080
BfmI CTRYAG 1 cut(s) 708
BfoI RGCGCY 1 cut(s) 1483
BfuI GTATCC 1 cut(s) 753
BglI GCCNNNNNGGC 1 cut(s) 103
BisI GCNGC 7 cut(s) 78, 95, 157, 327, 1132, 1231, 1322
BlsI GCNGC 7 cut(s) 79, 96, 158, 328, 1133, 1232, 1323
BmcAI AGTACT 1 cut(s) 395
Bme1390I CCNGG 1 cut(s) 594
Bme18I GGWCC 2 cut(s) 461, 1542
BmeT110I CYCGRG 1 cut(s) 1571
BmgT120I GGNCC 3 cut(s) 461, 536, 1542
BmiI GGNNCC 5 cut(s) 639, 859, 957, 1393, 1544
BmrFI CCNGG 1 cut(s) 594
BmrI ACTGGG 1 cut(s) 1090
BmsI GCATC 1 cut(s) 1198
BmuI ACTGGG 1 cut(s) 1090
BpiI GAAGAC 2 cut(s) 485, 1070
BpmI CTGGAG 1 cut(s) 53
Bpu10I CCTNAGC 1 cut(s) 164
BpuEI CTTGAG 1 cut(s) 863
BpuMI CCSGG 1 cut(s) 594
BsaJI CCNNGG 4 cut(s) 1413, 1445, 1494, 1570
BsaXI ACNNNNNCTCC 4 cut(s) 26, 56, 794, 824
Bsc4I CCNNNNNNNGG 5 cut(s) 101, 760, 1414, 1446, 1489
Bse1I ACTGG 1 cut(s) 1096
Bse3DI GCAATG 3 cut(s) 765, 983, 1425
BseDI CCNNGG 4 cut(s) 1413, 1445, 1494, 1570
BseGI GGATG 1 cut(s) 905
BseLI CCNNNNNNNGG 5 cut(s) 101, 760, 1414, 1446, 1489
BseMI GCAATG 3 cut(s) 765, 983, 1425
BseMII CTCAG 1 cut(s) 795
BseNI ACTGG 1 cut(s) 1096
BseRI GAGGAG 1 cut(s) 630
BseSI GKGCMC 2 cut(s) 52, 368
BseX3I CGGCCG 1 cut(s) 1203
BseXI GCAGC 4 cut(s) 143, 313, 1217, 1333
Bsh1285I CGRYCG 1 cut(s) 1206
BshFI GGCC 7 cut(s) 80, 90, 538, 608, 1205, 1238, 1493
BshNI GGYRCC 2 cut(s) 857, 955
BsiEI CGRYCG 1 cut(s) 1206
BsiHKAI GWGCWC 3 cut(s) 52, 368, 1566
BsiHKCI CYCGRG 1 cut(s) 1571
BsiSI CCGG 1 cut(s) 593
BslI CCNNNNNNNGG 5 cut(s) 101, 760, 1414, 1446, 1489
BsmAI GTCTC 3 cut(s) 290, 785, 797
BsmBI CGTCTC 1 cut(s) 785
BsmI GAATGC 1 cut(s) 1232
BsnI GGCC 7 cut(s) 80, 90, 538, 608, 1205, 1238, 1493
BsoBI CYCGRG 1 cut(s) 1571
Bsp1286I GDGCHC 3 cut(s) 52, 368, 1566
Bsp1407I TGTACA 1 cut(s) 1041
Bsp143I GATC 5 cut(s) 148, 169, 442, 844, 1441
Bsp19I CCATGG 1 cut(s) 1494
BspACI CCGC 5 cut(s) 77, 95, 1132, 1253, 1257
BspANI GGCC 7 cut(s) 80, 90, 538, 608, 1205, 1238, 1493
BspCNI CTCAG 1 cut(s) 794
BspLI GGNNCC 5 cut(s) 639, 859, 957, 1393, 1544
BspMAI CTGCAG 1 cut(s) 712
BspPI GGATC 3 cut(s) 177, 852, 1436
BspT107I GGYRCC 2 cut(s) 857, 955
BsrBI CCGCTC 1 cut(s) 1259
BsrDI GCAATG 3 cut(s) 765, 983, 1425
BsrGI TGTACA 1 cut(s) 1041
BsrI ACTGG 1 cut(s) 1096
BssECI CCNNGG 4 cut(s) 1413, 1445, 1494, 1570
BssMI GATC 5 cut(s) 148, 169, 442, 844, 1441
BssT1I CCWWGG 2 cut(s) 1413, 1494
Bst4CI ACNGT 4 cut(s) 233, 717, 724, 1589
Bst6I CTCTTC 4 cut(s) 267, 663, 818, 854
BstAPI GCANNNNNTGC 1 cut(s) 335
BstAUI TGTACA 1 cut(s) 1041
BstC8I GCNNGC 7 cut(s) 92, 161, 290, 324, 474, 990, 1257
BstDEI CTNAG 5 cut(s) 53, 164, 177, 358, 781
BstDSI CCRYGG 1 cut(s) 1494
BstF5I GGATG 1 cut(s) 905
BstH2I RGCGCY 1 cut(s) 1483
BstHHI GCGC 1 cut(s) 1482
BstKTI GATC 5 cut(s) 151, 172, 445, 847, 1444
BstMAI GTCTC 3 cut(s) 290, 785, 797
BstMBI GATC 5 cut(s) 148, 169, 442, 844, 1441
BstMCI CGRYCG 1 cut(s) 1206
BstMWI GCNNNNNNNGC 7 cut(s) 103, 335, 815, 947, 1202, 1252, 1427
BstNSI RCATGY 1 cut(s) 326
BstSCI CCNGG 1 cut(s) 592
BstSFI CTRYAG 1 cut(s) 708
BstSLI GKGCMC 2 cut(s) 52, 368
BstV1I GCAGC 4 cut(s) 143, 313, 1217, 1333
BstV2I GAAGAC 2 cut(s) 485, 1070
BstX2I RGATCY 1 cut(s) 844
BstYI RGATCY 1 cut(s) 844
BstZI CGGCCG 1 cut(s) 1203
BsuI GTATCC 1 cut(s) 753
BsuRI GGCC 7 cut(s) 80, 90, 538, 608, 1205, 1238, 1493
BtgI CCRYGG 1 cut(s) 1494
BtsCI GGATG 1 cut(s) 905
BtsI GCAGTG 1 cut(s) 499
BtsIMutI CAGTG 1 cut(s) 499
Cac8I GCNNGC 7 cut(s) 92, 161, 290, 324, 474, 990, 1257
CfoI GCGC 1 cut(s) 1482
Cfr13I GGNCC 3 cut(s) 461, 536, 1542
Csp6I GTAC 3 cut(s) 394, 431, 1042
CviQI GTAC 3 cut(s) 394, 431, 1042
DdeI CTNAG 5 cut(s) 53, 164, 177, 358, 781
DpnI GATC 5 cut(s) 150, 171, 444, 846, 1443
DpnII GATC 5 cut(s) 148, 169, 442, 844, 1441
DraI TTTAAA 1 cut(s) 1138
DraIII CACNNNGTG 1 cut(s) 505
EaeI YGGCCR 4 cut(s) 78, 606, 1203, 1236
EagI CGGCCG 1 cut(s) 1203
Eam1104I CTCTTC 4 cut(s) 267, 663, 818, 854
EarI CTCTTC 4 cut(s) 267, 663, 818, 854
EclXI CGGCCG 1 cut(s) 1203
Eco130I CCWWGG 2 cut(s) 1413, 1494
Eco147I AGGCCT 1 cut(s) 90
Eco32I GATATC 1 cut(s) 766
Eco47I GGWCC 2 cut(s) 461, 1542
Eco52I CGGCCG 1 cut(s) 1203
Eco57I CTGAAG 2 cut(s) 23, 1163
Eco88I CYCGRG 1 cut(s) 1571
EcoRV GATATC 1 cut(s) 766
EcoT14I CCWWGG 2 cut(s) 1413, 1494
ErhI CCWWGG 2 cut(s) 1413, 1494
Esp3I CGTCTC 1 cut(s) 785
FalI AAGNNNNNCTT 2 cut(s) 1161, 1193
FauI CCCGC 1 cut(s) 1264
FblI GTMKAC 1 cut(s) 612
Fnu4HI GCNGC 7 cut(s) 78, 95, 157, 327, 1132, 1231, 1322
FokI GGATG 1 cut(s) 892
Fsp4HI GCNGC 7 cut(s) 78, 95, 157, 327, 1132, 1231, 1322
FspBI CTAG 2 cut(s) 698, 1080
GlaI GCGC 1 cut(s) 1481
GluI GCNGC 7 cut(s) 78, 95, 157, 327, 1132, 1231, 1322
GsuI CTGGAG 1 cut(s) 53
HaeII RGCGCY 1 cut(s) 1483
HaeIII GGCC 7 cut(s) 80, 90, 538, 608, 1205, 1238, 1493
HapII CCGG 1 cut(s) 593
HhaI GCGC 1 cut(s) 1482
Hin6I GCGC 1 cut(s) 1480
HinP1I GCGC 1 cut(s) 1480
HinfI GANTC 3 cut(s) 520, 962, 1511
HpaII CCGG 1 cut(s) 593
HphI GGTGA 2 cut(s) 488, 894
Hpy166II GTNNAC 6 cut(s) 50, 115, 366, 613, 720, 1042
Hpy188I TCNGA 6 cut(s) 60, 587, 784, 1103, 1318, 1537
Hpy188III TCNNGA 5 cut(s) 32, 269, 644, 698, 1467
Hpy8I GTNNAC 6 cut(s) 50, 115, 366, 613, 720, 1042
HpyAV CCTTC 2 cut(s) 125, 1291
HpyCH4III ACNGT 4 cut(s) 233, 717, 724, 1589
HpyCH4IV ACGT 1 cut(s) 1313
HpyCH4V TGCA 8 cut(s) 50, 128, 329, 366, 710, 758, 830, 1246
HpyF10VI GCNNNNNNNGC 7 cut(s) 103, 335, 815, 947, 1202, 1252, 1427
HpyF3I CTNAG 5 cut(s) 53, 164, 177, 358, 781
HpySE526I ACGT 1 cut(s) 1313
HspAI GCGC 1 cut(s) 1480
Kzo9I GATC 5 cut(s) 148, 169, 442, 844, 1441
LmnI GCTCC 4 cut(s) 34, 643, 1391, 1561
Lsp1109I GCAGC 4 cut(s) 143, 313, 1217, 1333
LweI GCATC 1 cut(s) 1198
MaeI CTAG 2 cut(s) 698, 1080
MaeII ACGT 1 cut(s) 1313
MaeIII GTNAC 6 cut(s) 140, 246, 307, 505, 1248, 1383
MalI GATC 5 cut(s) 150, 171, 444, 846, 1443
MbiI CCGCTC 1 cut(s) 1259
MboI GATC 5 cut(s) 148, 169, 442, 844, 1441
MboII GAAGA 7 cut(s) 284, 485, 680, 835, 841, 991, 1075
MfeI CAATTG 2 cut(s) 632, 1262
MflI RGATCY 1 cut(s) 844
MhlI GDGCHC 3 cut(s) 52, 368, 1566
MluCI AATT 6 cut(s) 199, 526, 632, 1262, 1281, 1334
MmeI TCCRAC 3 cut(s) 83, 1128, 1243
MseI TTAA 5 cut(s) 204, 225, 1137, 1328, 1594
MslI CAYNNNNRTG 2 cut(s) 880, 1430
MspI CCGG 1 cut(s) 593
MspR9I CCNGG 1 cut(s) 594
MunI CAATTG 2 cut(s) 632, 1262
Mva1269I GAATGC 1 cut(s) 1232
MwoI GCNNNNNNNGC 7 cut(s) 103, 335, 815, 947, 1202, 1252, 1427
NciI CCSGG 1 cut(s) 594
NcoI CCATGG 1 cut(s) 1494
NdeII GATC 5 cut(s) 148, 169, 442, 844, 1441
NlaIV GGNNCC 5 cut(s) 639, 859, 957, 1393, 1544
NmeAIII GCCGAG 1 cut(s) 1214
NmuCI GTSAC 3 cut(s) 140, 246, 505
NspI RCATGY 1 cut(s) 326
OliI CACNNNNGTG 1 cut(s) 880
PaeI GCATGC 1 cut(s) 326
PceI AGGCCT 1 cut(s) 90
PctI GAATGC 1 cut(s) 1232
PfeI GAWTC 3 cut(s) 520, 962, 1511
PkrI GCNGC 7 cut(s) 79, 96, 158, 328, 1133, 1232, 1323
PspN4I GGNNCC 5 cut(s) 639, 859, 957, 1393, 1544
PspPI GGNCC 3 cut(s) 461, 536, 1542
PstI CTGCAG 1 cut(s) 712
PsuI RGATCY 1 cut(s) 844
RsaI GTAC 3 cut(s) 395, 432, 1043
RsaNI GTAC 3 cut(s) 394, 431, 1042
RseI CAYNNNNRTG 2 cut(s) 880, 1430
SaqAI TTAA 5 cut(s) 204, 225, 1137, 1328, 1594
SatI GCNGC 7 cut(s) 78, 95, 157, 327, 1132, 1231, 1322
Sau3AI GATC 5 cut(s) 148, 169, 442, 844, 1441
Sau96I GGNCC 3 cut(s) 461, 536, 1542
ScaI AGTACT 1 cut(s) 395
ScrFI CCNGG 1 cut(s) 594
SduI GDGCHC 3 cut(s) 52, 368, 1566
SfaNI GCATC 1 cut(s) 1198
SfcI CTRYAG 1 cut(s) 708
SinI GGWCC 2 cut(s) 461, 1542
SmiMI CAYNNNNRTG 2 cut(s) 880, 1430
SmlI CTYRAG 1 cut(s) 878
SmoI CTYRAG 1 cut(s) 878
SphI GCATGC 1 cut(s) 326
Sse9I AATT 6 cut(s) 199, 526, 632, 1262, 1281, 1334
SseBI AGGCCT 1 cut(s) 90
SsiI CCGC 5 cut(s) 77, 95, 1132, 1253, 1257
SspMI CTAG 2 cut(s) 698, 1080
StuI AGGCCT 1 cut(s) 90
StyD4I CCNGG 1 cut(s) 592
StyI CCWWGG 2 cut(s) 1413, 1494
TaaI ACNGT 4 cut(s) 233, 717, 724, 1589
TaiI ACGT 1 cut(s) 1316
TaqI TCGA 1 cut(s) 172
TaqII GACCGA 1 cut(s) 1437
TasI AATT 6 cut(s) 199, 526, 632, 1262, 1281, 1334
TatI WGTACW 3 cut(s) 393, 430, 1041
TauI GCSGC 3 cut(s) 80, 97, 1134
TfiI GAWTC 3 cut(s) 520, 962, 1511
Tru1I TTAA 5 cut(s) 204, 225, 1137, 1328, 1594
Tru9I TTAA 5 cut(s) 204, 225, 1137, 1328, 1594
TscAI CASTG 1 cut(s) 506
TseFI GTSAC 3 cut(s) 140, 246, 505
TseI GCWGC 4 cut(s) 156, 326, 1230, 1321
Tsp45I GTSAC 3 cut(s) 140, 246, 505
TspDTI ATGAA 5 cut(s) 972, 1076, 1414, 1448, 1503
TspRI CASTG 1 cut(s) 506
VneI GTGCAC 2 cut(s) 48, 364
VpaK11BI GGWCC 2 cut(s) 461, 1542
XapI RAATTY 1 cut(s) 1334
XbaI TCTAGA 1 cut(s) 697
XceI RCATGY 1 cut(s) 326
XmiI GTMKAC 1 cut(s) 612
XspI CTAG 2 cut(s) 698, 1080
ZrmI AGTACT 1 cut(s) 395
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.