Rh3BG345100

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
OG0000063
Physical Location & Seq
Forward (+)
37674020 .. 37675381
1362 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG345100.1

Sequence Viewer

Length: 1101 bp
ATGGAGCCTTACCAAACGAGTTGTACGGCTACACCCCTTTTCGTCAATTGGTGGTCAGATTACTCAAAGAAATTCGTTGACCCAGATTTAAAGGAACTGTTCACACAACGGATTGTCCAAGGAGTTGGTGATATCTTGAAGAGCCAAGATGGGCGGAAAAGAAAGCGGACTACTACTGATGGTCGCAAAGAAACTCCAGCCTTAGCACAACAGAGTTCATCCTTTTCTGAAGAATATTCTCCTGTGGGCTCGGATAACAACAGCGGCCATACTATTGAATTGACTATTGATGATGAGCAGGCCGAAACTTTTGCTGATGGTGAGGACAACACTTTAATTGACGAATCAGTTCATTCTTTCCCTGACGATCATGAGGCATACATGGAGGTGCAACATACGAGCGAGGCATTAAGTGTTGAGAGAGAAACGACGTCAATTCAACAAAATACTTTTAACCAAGCAACTTCTTCTACACCTTTGCTGTCTGCAGAGGCCTTAGCCTTCTTGGACGAGCTTGCTATGCCAAAGAAGATGACACCAAAACAGATTGGCAATGATCGGGAGAAGACAGCGGCCGAGTTTGTAACTGCATATTGCCGCAAACCCCTTTTGACCGTGGTTGACAACAATCTTTATGACCGCTTCAAACAAGAAATAAAATTTTTGATTTCGGTCAATCATTTTAGTCCCGACCGCATGCAACAAATTGAAGATCATCTCAAAGTTACAGATGTCAGTGTAATTGCCTATACACATGCTTTGGAAAAATGGGACACTGGCCGCGCTCAAGAAAAGAAATATGGACCTATTGTGGAGCGTCAATCTTCAAGGGCCGCGAAACTCACCCAACTCCGCGATGAGTTCAACAAGGATGCGCAAGAGTTAGCTGAGCTAGAGAGTCGAGTGAATGTGATCCGGGAGCGCATGGCCGCGGTTTCAAACGTTATAAACCAAGAGTATAAAGAACATCATGAAGAGCTCAAGTTGTTTTCCATACATGGTAGGGACACCCAAGCCTTTTTAGAAATCAAGCATGATCTTGATGAAGCAATGAAGAAGTATGACTCTGACTGGGCTGCATGGGAGAGGATCTTGCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

366

Amino Acids

41.99

Weight (kDa)

4.99

Isoelectric Point (pI)

36.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000063)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21382 FvH4_1g29794 FvH4_1g29795 FvH4_2g35573 FvH4_2g35574 FvH4_4g18552 FvH4_5g16044
malus_domestica MD05G1017000.v1.1
prunus_persica Prupe.3G140800_v2.0.a1 Prupe.6G164100_v2.0.a1
pyrus_communis pycom01g04330 pycom03g19820 pycom04g06720 pycom06g11360 pycom06g19000 pycom10g08100 pycom13g16660 pycom13g27590 pycom13g27640 pycom13g27890 pycom16g11770 pycom16g19530
rosa_chinensis RchiOBHm_Chr1g0317341 RchiOBHm_Chr1g0317351 RchiOBHm_Chr1g0320431 RchiOBHm_Chr1g0320711 RchiOBHm_Chr1g0320721 RchiOBHm_Chr1g0321611 RchiOBHm_Chr1g0321621 RchiOBHm_Chr1g0321631 RchiOBHm_Chr1g0323651 RchiOBHm_Chr1g0332991 RchiOBHm_Chr1g0333001 RchiOBHm_Chr1g0335981 RchiOBHm_Chr1g0335991 RchiOBHm_Chr1g0336001 RchiOBHm_Chr1g0350201 RchiOBHm_Chr1g0368201 RchiOBHm_Chr2g0105531 RchiOBHm_Chr2g0105541 RchiOBHm_Chr2g0116571 RchiOBHm_Chr2g0116581 RchiOBHm_Chr2g0121071 RchiOBHm_Chr2g0131351 RchiOBHm_Chr2g0131661 RchiOBHm_Chr2g0133021 RchiOBHm_Chr2g0138181 RchiOBHm_Chr2g0138191 RchiOBHm_Chr2g0142701 RchiOBHm_Chr2g0142711 RchiOBHm_Chr2g0152981 RchiOBHm_Chr3g0456181 RchiOBHm_Chr3g0456191 RchiOBHm_Chr3g0493631 RchiOBHm_Chr3g0496201 RchiOBHm_Chr4g0401541 RchiOBHm_Chr4g0410311 RchiOBHm_Chr4g0410321 RchiOBHm_Chr4g0419231 RchiOBHm_Chr4g0419511 RchiOBHm_Chr4g0419521 RchiOBHm_Chr5g0004311 RchiOBHm_Chr5g0004321 RchiOBHm_Chr5g0038131 RchiOBHm_Chr5g0038251 RchiOBHm_Chr5g0038261 RchiOBHm_Chr5g0038271 RchiOBHm_Chr5g0052241 RchiOBHm_Chr5g0053911 RchiOBHm_Chr5g0074641 RchiOBHm_Chr5g0076651 RchiOBHm_Chr5g0076661 RchiOBHm_Chr6g0249161 RchiOBHm_Chr6g0249171 RchiOBHm_Chr6g0250961 RchiOBHm_Chr6g0253701 RchiOBHm_Chr6g0262131 RchiOBHm_Chr6g0263181 RchiOBHm_Chr6g0263231 RchiOBHm_Chr6g0263241 RchiOBHm_Chr6g0263251 RchiOBHm_Chr6g0291271 RchiOBHm_Chr7g0194611 RchiOBHm_Chr7g0219691 RchiOBHm_Chr7g0219701 RchiOBHm_Chr7g0225431 RchiOBHm_Chr7g0234221 RchiOBHm_Chr7g0238711 RchiOBHm_Chr7g0238721 RchiOBHm_Chr7g0238731 RchiOBHm_Chr7g0239611 RchiOBHm_Chr7g0239621
rosa_laevigata RLG00000001361 RLG00000001376 RLG00000001860 RLG00000002051 RLG00000002362 RLG00000008940 RLG00000012764 RLG00000018782 RLG00000029639 RLG00000030151
rosa_multiflora Rmu_co8090794.1_g000001 Rmu_co8135356.1_g000001 Rmu_co8224968.1_g000001 Rmu_sc0000016.1_g000020 Rmu_sc0000029.1_g000061 Rmu_sc0000035.1_g000032 Rmu_sc0000060.1_g000041 Rmu_sc0000148.1_g000041 Rmu_sc0000315.1_g000084 Rmu_sc0000527.1_g000005 Rmu_sc0000527.1_g000007 Rmu_sc0000527.1_g000008 Rmu_sc0000648.1_g000002 Rmu_sc0000762.1_g000076 Rmu_sc0000870.1_g000003 Rmu_sc0000870.1_g000004 Rmu_sc0000948.1_g000037 Rmu_sc0000997.1_g000003 Rmu_sc0001047.1_g000041 Rmu_sc0001047.1_g000042 Rmu_sc0001075.1_g000044 Rmu_sc0001174.1_g000006 Rmu_sc0001235.1_g000025 Rmu_sc0001292.1_g000008 Rmu_sc0001301.1_g000038 Rmu_sc0001461.1_g000069 Rmu_sc0001461.1_g000070 Rmu_sc0001669.1_g000041 Rmu_sc0001689.1_g000027 Rmu_sc0001896.1_g000008 Rmu_sc0001909.1_g000013 Rmu_sc0002170.1_g000038 Rmu_sc0002200.1_g000014 Rmu_sc0002283.1_g000027 Rmu_sc0002284.1_g000014 Rmu_sc0002294.1_g000017 Rmu_sc0002294.1_g000018 Rmu_sc0002307.1_g000020 Rmu_sc0002307.1_g000021 Rmu_sc0002307.1_g000023 Rmu_sc0002357.1_g000054 Rmu_sc0002409.1_g000005 Rmu_sc0002535.1_g000002 Rmu_sc0002589.1_g000014 Rmu_sc0002759.1_g000016 Rmu_sc0002759.1_g000017 Rmu_sc0002777.1_g000015 Rmu_sc0002824.1_g000016 Rmu_sc0002872.1_g000005 Rmu_sc0002872.1_g000012 Rmu_sc0002872.1_g000013 Rmu_sc0002942.1_g000019 Rmu_sc0003337.1_g000001 Rmu_sc0003410.1_g000052 Rmu_sc0003445.1_g000010 Rmu_sc0003773.1_g000007 Rmu_sc0003773.1_g000008 Rmu_sc0003895.1_g000002 Rmu_sc0004063.1_g000006 Rmu_sc0004088.1_g000009 Rmu_sc0004088.1_g000010 Rmu_sc0004174.1_g000027 Rmu_sc0004196.1_g000010 Rmu_sc0004515.1_g000006 Rmu_sc0004727.1_g000010 Rmu_sc0004755.1_g000018 Rmu_sc0005016.1_g000030 Rmu_sc0005026.1_g000001 Rmu_sc0005044.1_g000007 Rmu_sc0005284.1_g000001 Rmu_sc0005431.1_g000030 Rmu_sc0005802.1_g000014 Rmu_sc0005802.1_g000015 Rmu_sc0005994.1_g000004 Rmu_sc0005994.1_g000005 Rmu_sc0006059.1_g000048 Rmu_sc0006583.1_g000013 Rmu_sc0006824.1_g000009 Rmu_sc0007458.1_g000005 Rmu_sc0007707.1_g000002 Rmu_sc0008242.1_g000012 Rmu_sc0008713.1_g000006 Rmu_sc0008770.1_g000008 Rmu_sc0009785.1_g000004 Rmu_sc0009785.1_g000005 Rmu_sc0010125.1_g000001 Rmu_sc0010211.1_g000004 Rmu_sc0011034.1_g000001 Rmu_sc0011833.1_g000006 Rmu_sc0014851.1_g000001 Rmu_sc0014899.1_g000001 Rmu_sc0015060.1_g000003 Rmu_sc0015186.1_g000001 Rmu_sc0015248.1_g000003 Rmu_sc0015248.1_g000004 Rmu_sc0015314.1_g000001 Rmu_sc0018098.1_g000002 Rmu_sc0022706.1_g000004 Rmu_sc0023350.1_g000002 Rmu_sc0027636.1_g000001 Rmu_sc0027672.1_g000003 Rmu_sc0030879.1_g000001 Rmu_ssc0000008.1_g000029 Rmu_ssc0000019.1_g000014 Rmu_ssc0000050.1_g000082 Rmu_ssc0000282.1_g000004 Rmu_ssc0000311.1_g000010
rosa_roxburghii Rroxscaffold_1G00015190 Rroxscaffold_1G00031880 Rroxscaffold_1G00031890 Rroxscaffold_1G00059310 Rroxscaffold_1G00060420 Rroxscaffold_1G00067930 Rroxscaffold_1G00075030 Rroxscaffold_2G00082210 Rroxscaffold_2G00122970 Rroxscaffold_3G00218230 Rroxscaffold_3G00219020 Rroxscaffold_3G00219030 Rroxscaffold_3G00223680 Rroxscaffold_3G00223690 Rroxscaffold_3G00223700 Rroxscaffold_3G00226870 Rroxscaffold_3G00226880 Rroxscaffold_3G00232990 Rroxscaffold_3G00265610 Rroxscaffold_3G00265620 Rroxscaffold_3G00265630 Rroxscaffold_4G00318660 Rroxscaffold_4G00319060 Rroxscaffold_4G00323500 Rroxscaffold_5G00357520 Rroxscaffold_5G00366150 Rroxscaffold_5G00377470 Rroxscaffold_6G00395700 Rroxscaffold_6G00413950 Rroxscaffold_7G00187650 Rroxscaffold_7G00198290 Rroxscaffold_7G00198300 Rroxscaffold_7G00208060
rosa_rugosa Rorug01G0173900 Rorug01G0174000 Rorug01G0174100 Rorug01G0174100 Rorug02G0341200 Rorug04G0135700 Rorug04G0135800 Rorug05G0032500 Rorug06G0021800
rosa_samantha Rh1AG036600 Rh1AG245800 Rh1CG021700 Rh1CG021800 Rh1CG085800 Rh1CG085900 Rh1CG187900 Rh1CG229600 Rh1CG239600 Rh1CG246500 Rh1CG246600 Rh2BG478100 Rh2DG341300 Rh2DG366600 Rh2DG375700 Rh2DG384300 Rh2DG487000 Rh2DG504000 Rh2DG504100 Rh3AG311800 Rh3AG327500 Rh3AG328300 Rh3BG345100 Rh3CG320100 Rh4AG005700 Rh4AG067900 Rh4AG068000 Rh4AG084400 Rh4AG106700 Rh4AG160000 Rh4AG173900 Rh4AG174000 Rh4CG125300 Rh4CG125500 Rh4CG264500 Rh4DG110800 Rh5AG047300 Rh5AG085200 Rh5AG126300 Rh5AG127300 Rh5AG203000 Rh5AG332400 Rh5AG332500 Rh5AG342400 Rh5AG344100 Rh5AG375600 Rh5AG378300 Rh5AG386000 Rh5AG529600 Rh5BG125200 Rh5CG137600 Rh5CG137700 Rh5DG125200 Rh6BG134100 Rh6BG175400 Rh6BG179500 Rh6BG179600 Rh6BG181600 Rh6BG181700 Rh6BG191100 Rh6BG232900 Rh6BG259700 Rh6BG259800 Rh7AG028000 Rh7AG319400 Rh7AG352700 Rh7AG352800 Rh7AG352900 Rh7AG482500 Rh7AG482600 Rh7AG503800 Rh7BG334700 Rh7CG200100 Rh7CG336200 Rh7CG370200 Rh7CG370400 Rh7CG370500
rosa_wichuraiana Rw1G001580 Rw1G003570 Rw1G004260 Rw1G004270 Rw1G021170 Rw2G019390 Rw2G040280 Rw2G044050 Rw4G004430 Rw5G010950 Rw5G018350 Rw5G032890 Rw6G002840 Rw6G006510 Rw6G007780 Rw6G033790 Rw7G036320 Rw7G040550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 947
AatII GACGTC 1 cut(s) 434
Acc16I TGCGCA 1 cut(s) 876
AccII CGCG 4 cut(s) 783, 836, 855, 932
AclI AACGTT 1 cut(s) 942
AclWI GGATC 2 cut(s) 907, 1097
AcoI YGGCCR 4 cut(s) 265, 573, 778, 927
AcsI RAATTY 2 cut(s) 71, 659
AcuI CTGAAG 1 cut(s) 249
AcyI GRCGYC 1 cut(s) 431
AfaI GTAC 1 cut(s) 25
AgsI TTSAA 8 cut(s) 139, 278, 440, 646, 710, 828, 865, 939
AluBI AGCT 4 cut(s) 514, 887, 892, 979
AluI AGCT 4 cut(s) 514, 887, 892, 979
Alw21I GWGCWC 1 cut(s) 981
AlwI GGATC 2 cut(s) 907, 1097
AoxI GGCC 7 cut(s) 265, 300, 492, 573, 778, 831, 927
ApeKI GCWGC 1 cut(s) 1076
ApoI RAATTY 2 cut(s) 71, 659
Asp700I GAANNNNTTC 1 cut(s) 348
AspLEI GCGC 3 cut(s) 785, 877, 924
AspS9I GGNCC 2 cut(s) 803, 831
AsuC2I CCSGG 1 cut(s) 917
AsuHPI GGTGA 3 cut(s) 140, 332, 835
AvaII GGWCC 1 cut(s) 803
BanII GRGCYC 2 cut(s) 251, 981
BbsI GAAGAC 1 cut(s) 572
Bbv12I GWGCWC 1 cut(s) 981
BbvI GCAGC 1 cut(s) 1063
BccI CCATC 3 cut(s) 143, 173, 311
BceAI ACGGC 1 cut(s) 42
BcgI CGANNNNNNTGC 2 cut(s) 293, 327
BcnI CCSGG 1 cut(s) 917
BfaI CTAG 1 cut(s) 893
BfmI CTRYAG 1 cut(s) 486
BisI GCNGC 7 cut(s) 265, 573, 598, 781, 834, 930, 1077
BlpI GCTNAGC 1 cut(s) 888
BlsI GCNGC 7 cut(s) 266, 574, 599, 782, 835, 931, 1078
Bme1390I CCNGG 1 cut(s) 917
Bme18I GGWCC 1 cut(s) 803
BmgT120I GGNCC 2 cut(s) 803, 831
BmiI GGNNCC 1 cut(s) 6
BmrFI CCNGG 1 cut(s) 917
BmrI ACTGGG 1 cut(s) 1081
BmsI GCATC 1 cut(s) 862
BmuI ACTGGG 1 cut(s) 1081
BpiI GAAGAC 1 cut(s) 572
BpmI CTGGAG 1 cut(s) 180
Bpu10I CCTNAGC 2 cut(s) 202, 496
Bpu1102I GCTNAGC 1 cut(s) 888
BpuEI CTTGAG 2 cut(s) 771, 965
BpuMI CCSGG 1 cut(s) 917
BsaHI GRCGYC 1 cut(s) 431
BsaJI CCNNGG 3 cut(s) 118, 615, 930
Bse1I ACTGG 2 cut(s) 781, 1076
Bse3DI GCAATG 2 cut(s) 559, 1056
BseDI CCNNGG 3 cut(s) 118, 615, 930
BseGI GGATG 2 cut(s) 218, 877
BseMI GCAATG 2 cut(s) 559, 1056
BseMII CTCAG 1 cut(s) 879
BseNI ACTGG 2 cut(s) 781, 1076
BseX3I CGGCCG 1 cut(s) 573
BseXI GCAGC 1 cut(s) 1063
Bsh1236I CGCG 4 cut(s) 783, 836, 855, 932
Bsh1285I CGRYCG 2 cut(s) 576, 694
BshFI GGCC 7 cut(s) 267, 302, 494, 575, 780, 833, 929
BsiEI CGRYCG 2 cut(s) 576, 694
BsiHKAI GWGCWC 1 cut(s) 981
BsiSI CCGG 1 cut(s) 916
BslFI GGGAC 3 cut(s) 672, 785, 1019
BsmFI GGGAC 3 cut(s) 672, 785, 1019
BsnI GGCC 7 cut(s) 267, 302, 494, 575, 780, 833, 929
Bsp1286I GDGCHC 2 cut(s) 251, 981
Bsp143I GATC 6 cut(s) 367, 556, 712, 912, 1036, 1089
Bsp1720I GCTNAGC 1 cut(s) 888
BspANI GGCC 7 cut(s) 267, 302, 494, 575, 780, 833, 929
BspCNI CTCAG 1 cut(s) 880
BspFNI CGCG 4 cut(s) 783, 836, 855, 932
BspHI TCATGA 2 cut(s) 370, 970
BspLI GGNNCC 1 cut(s) 6
BspMAI CTGCAG 1 cut(s) 490
BspPI GGATC 2 cut(s) 907, 1097
BspQI GCTCTTC 2 cut(s) 134, 969
BsrDI GCAATG 2 cut(s) 559, 1056
BsrI ACTGG 2 cut(s) 781, 1076
BssECI CCNNGG 3 cut(s) 118, 615, 930
BssMI GATC 6 cut(s) 367, 556, 712, 912, 1036, 1089
BssNI GRCGYC 1 cut(s) 431
BssT1I CCWWGG 1 cut(s) 118
Bst4CI ACNGT 2 cut(s) 99, 616
Bst6I CTCTTC 2 cut(s) 134, 969
BstACI GRCGYC 1 cut(s) 431
BstC8I GCNNGC 3 cut(s) 300, 516, 698
BstDEI CTNAG 3 cut(s) 202, 496, 888
BstDSI CCRYGG 2 cut(s) 615, 930
BstF5I GGATG 2 cut(s) 218, 877
BstFNI CGCG 4 cut(s) 783, 836, 855, 932
BstHHI GCGC 3 cut(s) 785, 877, 924
BstKTI GATC 6 cut(s) 370, 559, 715, 915, 1039, 1092
BstMBI GATC 6 cut(s) 367, 556, 712, 912, 1036, 1089
BstMCI CGRYCG 2 cut(s) 576, 694
BstMWI GCNNNNNNNGC 1 cut(s) 520
BstNSI RCATGY 2 cut(s) 700, 758
BstSCI CCNGG 1 cut(s) 915
BstSFI CTRYAG 1 cut(s) 486
BstUI CGCG 4 cut(s) 783, 836, 855, 932
BstV1I GCAGC 1 cut(s) 1063
BstV2I GAAGAC 1 cut(s) 572
BstX2I RGATCY 1 cut(s) 1089
BstXI CCANNNNNNTGG 1 cut(s) 125
BstYI RGATCY 1 cut(s) 1089
BstZI CGGCCG 1 cut(s) 573
BsuRI GGCC 7 cut(s) 267, 302, 494, 575, 780, 833, 929
BtgI CCRYGG 2 cut(s) 615, 930
BtgZI GCGATG 1 cut(s) 870
BtsCI GGATG 2 cut(s) 218, 877
BtsIMutI CAGTG 2 cut(s) 742, 774
Cac8I GCNNGC 3 cut(s) 300, 516, 698
CciI TCATGA 2 cut(s) 370, 970
CfoI GCGC 3 cut(s) 785, 877, 924
Cfr13I GGNCC 2 cut(s) 803, 831
Cfr42I CCGCGG 1 cut(s) 933
CseI GACGC 1 cut(s) 806
Csp6I GTAC 1 cut(s) 24
CviAII CATG 9 cut(s) 371, 382, 697, 755, 925, 971, 998, 1034, 1080
CviQI GTAC 1 cut(s) 24
DdeI CTNAG 3 cut(s) 202, 496, 888
DpnI GATC 6 cut(s) 369, 558, 714, 914, 1038, 1091
DpnII GATC 6 cut(s) 367, 556, 712, 912, 1036, 1089
DraI TTTAAA 1 cut(s) 90
EaeI YGGCCR 4 cut(s) 265, 573, 778, 927
EagI CGGCCG 1 cut(s) 573
Eam1104I CTCTTC 2 cut(s) 134, 969
EarI CTCTTC 2 cut(s) 134, 969
EciI GGCGGA 1 cut(s) 169
Ecl136II GAGCTC 1 cut(s) 979
EclXI CGGCCG 1 cut(s) 573
Eco130I CCWWGG 1 cut(s) 118
Eco147I AGGCCT 1 cut(s) 494
Eco24I GRGCYC 2 cut(s) 251, 981
Eco32I GATATC 1 cut(s) 133
Eco47I GGWCC 1 cut(s) 803
Eco52I CGGCCG 1 cut(s) 573
Eco53kI GAGCTC 1 cut(s) 979
Eco57I CTGAAG 1 cut(s) 249
EcoICRI GAGCTC 1 cut(s) 979
EcoRV GATATC 1 cut(s) 133
EcoT14I CCWWGG 1 cut(s) 118
EcoT38I GRGCYC 2 cut(s) 251, 981
ErhI CCWWGG 1 cut(s) 118
FaeI CATG 9 cut(s) 374, 385, 700, 758, 928, 974, 1001, 1037, 1083
FaqI GGGAC 3 cut(s) 672, 785, 1019
FatI CATG 9 cut(s) 370, 381, 696, 754, 924, 970, 997, 1033, 1079
Fnu4HI GCNGC 7 cut(s) 265, 573, 598, 781, 834, 930, 1077
FokI GGATG 2 cut(s) 205, 884
FriOI GRGCYC 2 cut(s) 251, 981
Fsp4HI GCNGC 7 cut(s) 265, 573, 598, 781, 834, 930, 1077
FspBI CTAG 1 cut(s) 893
FspI TGCGCA 1 cut(s) 876
GlaI GCGC 3 cut(s) 784, 876, 923
GluI GCNGC 7 cut(s) 265, 573, 598, 781, 834, 930, 1077
GsuI CTGGAG 1 cut(s) 180
HaeIII GGCC 7 cut(s) 267, 302, 494, 575, 780, 833, 929
HapII CCGG 1 cut(s) 916
HgaI GACGC 1 cut(s) 806
HhaI GCGC 3 cut(s) 785, 877, 924
Hin1I GRCGYC 1 cut(s) 431
Hin1II CATG 9 cut(s) 374, 385, 700, 758, 928, 974, 1001, 1037, 1083
Hin6I GCGC 3 cut(s) 783, 875, 922
HinP1I GCGC 3 cut(s) 783, 875, 922
HincII GTYRAC 2 cut(s) 79, 622
HindII GTYRAC 2 cut(s) 79, 622
HinfI GANTC 3 cut(s) 344, 898, 1064
HpaII CCGG 1 cut(s) 916
HphI GGTGA 3 cut(s) 140, 332, 835
Hpy166II GTNNAC 3 cut(s) 79, 102, 622
Hpy188I TCNGA 4 cut(s) 58, 229, 253, 1069
Hpy188III TCNNGA 7 cut(s) 136, 371, 560, 689, 788, 971, 1040
Hpy8I GTNNAC 3 cut(s) 79, 102, 622
Hpy99I CGWCG 1 cut(s) 433
HpyAV CCTTC 1 cut(s) 511
HpyCH4III ACNGT 2 cut(s) 99, 616
HpyCH4IV ACGT 2 cut(s) 431, 942
HpyCH4V TGCA 5 cut(s) 391, 488, 590, 700, 1079
HpyF10VI GCNNNNNNNGC 1 cut(s) 520
HpyF3I CTNAG 3 cut(s) 202, 496, 888
HpySE526I ACGT 2 cut(s) 431, 942
Hsp92I GRCGYC 1 cut(s) 431
Hsp92II CATG 9 cut(s) 374, 385, 700, 758, 928, 974, 1001, 1037, 1083
HspAI GCGC 3 cut(s) 783, 875, 922
KspI CCGCGG 1 cut(s) 933
Kzo9I GATC 6 cut(s) 367, 556, 712, 912, 1036, 1089
LguI GCTCTTC 2 cut(s) 134, 969
LmnI GCTCC 3 cut(s) 4, 814, 919
LpnPI CCDG 8 cut(s) 96, 210, 255, 284, 375, 762, 929, 1057
Lsp1109I GCAGC 1 cut(s) 1063
LweI GCATC 1 cut(s) 862
MaeI CTAG 1 cut(s) 893
MaeII ACGT 2 cut(s) 431, 942
MaeIII GTNAC 2 cut(s) 583, 724
MalI GATC 6 cut(s) 369, 558, 714, 914, 1038, 1091
MboI GATC 6 cut(s) 367, 556, 712, 912, 1036, 1089
MboII GAAGA 9 cut(s) 151, 242, 459, 541, 577, 722, 816, 986, 1066
MfeI CAATTG 1 cut(s) 46
MflI RGATCY 1 cut(s) 1089
MhlI GDGCHC 2 cut(s) 251, 981
MluCI AATT 8 cut(s) 46, 71, 278, 336, 435, 659, 705, 741
MlyI GAGTC 2 cut(s) 907, 1058
MnlI CCTC 6 cut(s) 316, 367, 379, 397, 484, 1080
MroXI GAANNNNTTC 1 cut(s) 348
MseI TTAA 4 cut(s) 89, 335, 410, 453
MslI CAYNNNNRTG 1 cut(s) 386
MspA1I CMGCKG 3 cut(s) 264, 572, 932
MspI CCGG 1 cut(s) 916
MspR9I CCNGG 1 cut(s) 917
MunI CAATTG 1 cut(s) 46
MvnI CGCG 4 cut(s) 783, 836, 855, 932
MwoI GCNNNNNNNGC 1 cut(s) 520
NciI CCSGG 1 cut(s) 917
NdeII GATC 6 cut(s) 367, 556, 712, 912, 1036, 1089
NlaIII CATG 9 cut(s) 374, 385, 700, 758, 928, 974, 1001, 1037, 1083
NlaIV GGNNCC 1 cut(s) 6
NmeAIII GCCGAG 1 cut(s) 601
NsbI TGCGCA 1 cut(s) 876
NspI RCATGY 2 cut(s) 700, 758
PaeI GCATGC 1 cut(s) 700
PagI TCATGA 2 cut(s) 370, 970
PceI AGGCCT 1 cut(s) 494
PciSI GCTCTTC 2 cut(s) 134, 969
PdmI GAANNNNTTC 1 cut(s) 348
PfeI GAWTC 1 cut(s) 344
PfoI TCCNGGA 1 cut(s) 915
PkrI GCNGC 7 cut(s) 266, 574, 599, 782, 835, 931, 1078
PleI GAGTC 2 cut(s) 906, 1058
PpsI GAGTC 2 cut(s) 906, 1058
PsiI TTATAA 1 cut(s) 947
Psp124BI GAGCTC 1 cut(s) 981
Psp1406I AACGTT 1 cut(s) 942
PspN4I GGNNCC 1 cut(s) 6
PspPI GGNCC 2 cut(s) 803, 831
PstI CTGCAG 1 cut(s) 490
PsuI RGATCY 1 cut(s) 1089
RsaI GTAC 1 cut(s) 25
RsaNI GTAC 1 cut(s) 24
RseI CAYNNNNRTG 1 cut(s) 386
SacI GAGCTC 1 cut(s) 981
SacII CCGCGG 1 cut(s) 933
SapI GCTCTTC 2 cut(s) 134, 969
SaqAI TTAA 4 cut(s) 89, 335, 410, 453
SatI GCNGC 7 cut(s) 265, 573, 598, 781, 834, 930, 1077
Sau3AI GATC 6 cut(s) 367, 556, 712, 912, 1036, 1089
Sau96I GGNCC 2 cut(s) 803, 831
SchI GAGTC 2 cut(s) 907, 1058
ScrFI CCNGG 1 cut(s) 917
SduI GDGCHC 2 cut(s) 251, 981
SetI ASST 9 cut(s) 390, 434, 478, 516, 808, 889, 894, 945, 981
SfaNI GCATC 1 cut(s) 862
SfcI CTRYAG 1 cut(s) 486
Sfr303I CCGCGG 1 cut(s) 933
SgrBI CCGCGG 1 cut(s) 933
SinI GGWCC 1 cut(s) 803
SmiMI CAYNNNNRTG 1 cut(s) 386
SmlI CTYRAG 2 cut(s) 786, 980
SmoI CTYRAG 2 cut(s) 786, 980
SphI GCATGC 1 cut(s) 700
Sse9I AATT 8 cut(s) 46, 71, 278, 336, 435, 659, 705, 741
SseBI AGGCCT 1 cut(s) 494
SspI AATATT 1 cut(s) 236
SspMI CTAG 1 cut(s) 893
SstI GAGCTC 1 cut(s) 981
StuI AGGCCT 1 cut(s) 494
StyD4I CCNGG 1 cut(s) 915
StyI CCWWGG 1 cut(s) 118
TaaI ACNGT 2 cut(s) 99, 616
TaiI ACGT 2 cut(s) 434, 945
TaqI TCGA 1 cut(s) 901
TaqII GACCGA 1 cut(s) 661
TasI AATT 8 cut(s) 46, 71, 278, 336, 435, 659, 705, 741
TauI GCSGC 6 cut(s) 267, 575, 600, 783, 836, 932
TfiI GAWTC 1 cut(s) 344
Tru1I TTAA 4 cut(s) 89, 335, 410, 453
Tru9I TTAA 4 cut(s) 89, 335, 410, 453
TscAI CASTG 2 cut(s) 742, 781
TseI GCWGC 1 cut(s) 1076
TspDTI ATGAA 5 cut(s) 207, 341, 987, 1059, 1067
TspGWI ACGGA 1 cut(s) 124
TspRI CASTG 2 cut(s) 742, 781
VpaK11BI GGWCC 1 cut(s) 803
XapI RAATTY 2 cut(s) 71, 659
XceI RCATGY 2 cut(s) 700, 758
XmnI GAANNNNTTC 1 cut(s) 348
XspI CTAG 1 cut(s) 893
ZraI GACGTC 1 cut(s) 432
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.