Rh7AG352700

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0000063
Physical Location & Seq
Forward (+)
45151798 .. 45153545
1748 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG352700.1

Sequence Viewer

Length: 819 bp
ATGTGTGACTCAGTCTCACGACGTTACCAAGAACGTGTCAGCCTTTTCAAGATGGAGCCTTACCAAACGAGTTGTACAGCTACACCCCCTTTCGTTAATTGGTGGTCAGATTACTCAAAGAAATTCGTTGACCCAGATTTAAAGGAACTGTTCACACAGCGGATTGTCCAAGGAGTTGGTGATATCTTGAAGAGCCAAGATGGGCGGAGAAGAAAGCGAACTACGACTGATGGTCGCAAAGAAACTCCAGCCTTAGCACAACAGAGTTCATCTTTTTCTGAAGAATATTCTCCTGCGGGCTCGGATAACAACAGCGGCCATACTATTGAATTGACTATTGATGATGAACAGGCCGAAACTTTTGCTAATCGTGAGGACAACGCTTTAATTGACGAATCATTTCATTCTTTTCATGATGATCATGAGATCATCTCAAAGCTAGTTACAGATGTCAGTGTAATTGCCTATACACATGCTTTAGAAAAATGGGACACTGGCCGCGCTCTACAAAAGAAATATGGACCTATTGTGGAGCATCAATCTTCGAGGGCTGCGAAACTCACCCAACTCCGTGATGAGTTCAACAAAGATGCGCAAGAGTTAGCTGAGCTAGAGAGTCCAGTGAATGTGATCCGGGAGCGCATGGCCGCTGCTTCAAACGTTATAAACCAAGAGTATAAAGAACATCATGAAGAGCTCAAGTTGTTTTCCATACATGGTAGGGACACCCAAGCCTTTTTTGAAATCAAGCATGATCTTGATGAAGCAATGAAGAAGTATGACGCTGACTGGGTTGCGTGGGAGAAGATCTTGCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

272

Amino Acids

31.39

Weight (kDa)

5.2

Isoelectric Point (pI)

46.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000063)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21382 FvH4_1g29794 FvH4_1g29795 FvH4_2g35573 FvH4_2g35574 FvH4_4g18552 FvH4_5g16044
malus_domestica MD05G1017000.v1.1
prunus_persica Prupe.3G140800_v2.0.a1 Prupe.6G164100_v2.0.a1
pyrus_communis pycom01g04330 pycom03g19820 pycom04g06720 pycom06g11360 pycom06g19000 pycom10g08100 pycom13g16660 pycom13g27590 pycom13g27640 pycom13g27890 pycom16g11770 pycom16g19530
rosa_chinensis RchiOBHm_Chr1g0317341 RchiOBHm_Chr1g0317351 RchiOBHm_Chr1g0320431 RchiOBHm_Chr1g0320711 RchiOBHm_Chr1g0320721 RchiOBHm_Chr1g0321611 RchiOBHm_Chr1g0321621 RchiOBHm_Chr1g0321631 RchiOBHm_Chr1g0323651 RchiOBHm_Chr1g0332991 RchiOBHm_Chr1g0333001 RchiOBHm_Chr1g0335981 RchiOBHm_Chr1g0335991 RchiOBHm_Chr1g0336001 RchiOBHm_Chr1g0350201 RchiOBHm_Chr1g0368201 RchiOBHm_Chr2g0105531 RchiOBHm_Chr2g0105541 RchiOBHm_Chr2g0116571 RchiOBHm_Chr2g0116581 RchiOBHm_Chr2g0121071 RchiOBHm_Chr2g0131351 RchiOBHm_Chr2g0131661 RchiOBHm_Chr2g0133021 RchiOBHm_Chr2g0138181 RchiOBHm_Chr2g0138191 RchiOBHm_Chr2g0142701 RchiOBHm_Chr2g0142711 RchiOBHm_Chr2g0152981 RchiOBHm_Chr3g0456181 RchiOBHm_Chr3g0456191 RchiOBHm_Chr3g0493631 RchiOBHm_Chr3g0496201 RchiOBHm_Chr4g0401541 RchiOBHm_Chr4g0410311 RchiOBHm_Chr4g0410321 RchiOBHm_Chr4g0419231 RchiOBHm_Chr4g0419511 RchiOBHm_Chr4g0419521 RchiOBHm_Chr5g0004311 RchiOBHm_Chr5g0004321 RchiOBHm_Chr5g0038131 RchiOBHm_Chr5g0038251 RchiOBHm_Chr5g0038261 RchiOBHm_Chr5g0038271 RchiOBHm_Chr5g0052241 RchiOBHm_Chr5g0053911 RchiOBHm_Chr5g0074641 RchiOBHm_Chr5g0076651 RchiOBHm_Chr5g0076661 RchiOBHm_Chr6g0249161 RchiOBHm_Chr6g0249171 RchiOBHm_Chr6g0250961 RchiOBHm_Chr6g0253701 RchiOBHm_Chr6g0262131 RchiOBHm_Chr6g0263181 RchiOBHm_Chr6g0263231 RchiOBHm_Chr6g0263241 RchiOBHm_Chr6g0263251 RchiOBHm_Chr6g0291271 RchiOBHm_Chr7g0194611 RchiOBHm_Chr7g0219691 RchiOBHm_Chr7g0219701 RchiOBHm_Chr7g0225431 RchiOBHm_Chr7g0234221 RchiOBHm_Chr7g0238711 RchiOBHm_Chr7g0238721 RchiOBHm_Chr7g0238731 RchiOBHm_Chr7g0239611 RchiOBHm_Chr7g0239621
rosa_laevigata RLG00000001361 RLG00000001376 RLG00000001860 RLG00000002051 RLG00000002362 RLG00000008940 RLG00000012764 RLG00000018782 RLG00000029639 RLG00000030151
rosa_multiflora Rmu_co8090794.1_g000001 Rmu_co8135356.1_g000001 Rmu_co8224968.1_g000001 Rmu_sc0000016.1_g000020 Rmu_sc0000029.1_g000061 Rmu_sc0000035.1_g000032 Rmu_sc0000060.1_g000041 Rmu_sc0000148.1_g000041 Rmu_sc0000315.1_g000084 Rmu_sc0000527.1_g000005 Rmu_sc0000527.1_g000007 Rmu_sc0000527.1_g000008 Rmu_sc0000648.1_g000002 Rmu_sc0000762.1_g000076 Rmu_sc0000870.1_g000003 Rmu_sc0000870.1_g000004 Rmu_sc0000948.1_g000037 Rmu_sc0000997.1_g000003 Rmu_sc0001047.1_g000041 Rmu_sc0001047.1_g000042 Rmu_sc0001075.1_g000044 Rmu_sc0001174.1_g000006 Rmu_sc0001235.1_g000025 Rmu_sc0001292.1_g000008 Rmu_sc0001301.1_g000038 Rmu_sc0001461.1_g000069 Rmu_sc0001461.1_g000070 Rmu_sc0001669.1_g000041 Rmu_sc0001689.1_g000027 Rmu_sc0001896.1_g000008 Rmu_sc0001909.1_g000013 Rmu_sc0002170.1_g000038 Rmu_sc0002200.1_g000014 Rmu_sc0002283.1_g000027 Rmu_sc0002284.1_g000014 Rmu_sc0002294.1_g000017 Rmu_sc0002294.1_g000018 Rmu_sc0002307.1_g000020 Rmu_sc0002307.1_g000021 Rmu_sc0002307.1_g000023 Rmu_sc0002357.1_g000054 Rmu_sc0002409.1_g000005 Rmu_sc0002535.1_g000002 Rmu_sc0002589.1_g000014 Rmu_sc0002759.1_g000016 Rmu_sc0002759.1_g000017 Rmu_sc0002777.1_g000015 Rmu_sc0002824.1_g000016 Rmu_sc0002872.1_g000005 Rmu_sc0002872.1_g000012 Rmu_sc0002872.1_g000013 Rmu_sc0002942.1_g000019 Rmu_sc0003337.1_g000001 Rmu_sc0003410.1_g000052 Rmu_sc0003445.1_g000010 Rmu_sc0003773.1_g000007 Rmu_sc0003773.1_g000008 Rmu_sc0003895.1_g000002 Rmu_sc0004063.1_g000006 Rmu_sc0004088.1_g000009 Rmu_sc0004088.1_g000010 Rmu_sc0004174.1_g000027 Rmu_sc0004196.1_g000010 Rmu_sc0004515.1_g000006 Rmu_sc0004727.1_g000010 Rmu_sc0004755.1_g000018 Rmu_sc0005016.1_g000030 Rmu_sc0005026.1_g000001 Rmu_sc0005044.1_g000007 Rmu_sc0005284.1_g000001 Rmu_sc0005431.1_g000030 Rmu_sc0005802.1_g000014 Rmu_sc0005802.1_g000015 Rmu_sc0005994.1_g000004 Rmu_sc0005994.1_g000005 Rmu_sc0006059.1_g000048 Rmu_sc0006583.1_g000013 Rmu_sc0006824.1_g000009 Rmu_sc0007458.1_g000005 Rmu_sc0007707.1_g000002 Rmu_sc0008242.1_g000012 Rmu_sc0008713.1_g000006 Rmu_sc0008770.1_g000008 Rmu_sc0009785.1_g000004 Rmu_sc0009785.1_g000005 Rmu_sc0010125.1_g000001 Rmu_sc0010211.1_g000004 Rmu_sc0011034.1_g000001 Rmu_sc0011833.1_g000006 Rmu_sc0014851.1_g000001 Rmu_sc0014899.1_g000001 Rmu_sc0015060.1_g000003 Rmu_sc0015186.1_g000001 Rmu_sc0015248.1_g000003 Rmu_sc0015248.1_g000004 Rmu_sc0015314.1_g000001 Rmu_sc0018098.1_g000002 Rmu_sc0022706.1_g000004 Rmu_sc0023350.1_g000002 Rmu_sc0027636.1_g000001 Rmu_sc0027672.1_g000003 Rmu_sc0030879.1_g000001 Rmu_ssc0000008.1_g000029 Rmu_ssc0000019.1_g000014 Rmu_ssc0000050.1_g000082 Rmu_ssc0000282.1_g000004 Rmu_ssc0000311.1_g000010
rosa_roxburghii Rroxscaffold_1G00015190 Rroxscaffold_1G00031880 Rroxscaffold_1G00031890 Rroxscaffold_1G00059310 Rroxscaffold_1G00060420 Rroxscaffold_1G00067930 Rroxscaffold_1G00075030 Rroxscaffold_2G00082210 Rroxscaffold_2G00122970 Rroxscaffold_3G00218230 Rroxscaffold_3G00219020 Rroxscaffold_3G00219030 Rroxscaffold_3G00223680 Rroxscaffold_3G00223690 Rroxscaffold_3G00223700 Rroxscaffold_3G00226870 Rroxscaffold_3G00226880 Rroxscaffold_3G00232990 Rroxscaffold_3G00265610 Rroxscaffold_3G00265620 Rroxscaffold_3G00265630 Rroxscaffold_4G00318660 Rroxscaffold_4G00319060 Rroxscaffold_4G00323500 Rroxscaffold_5G00357520 Rroxscaffold_5G00366150 Rroxscaffold_5G00377470 Rroxscaffold_6G00395700 Rroxscaffold_6G00413950 Rroxscaffold_7G00187650 Rroxscaffold_7G00198290 Rroxscaffold_7G00198300 Rroxscaffold_7G00208060
rosa_rugosa Rorug01G0173900 Rorug01G0174000 Rorug01G0174100 Rorug01G0174100 Rorug02G0341200 Rorug04G0135700 Rorug04G0135800 Rorug05G0032500 Rorug06G0021800
rosa_samantha Rh1AG036600 Rh1AG245800 Rh1CG021700 Rh1CG021800 Rh1CG085800 Rh1CG085900 Rh1CG187900 Rh1CG229600 Rh1CG239600 Rh1CG246500 Rh1CG246600 Rh2BG478100 Rh2DG341300 Rh2DG366600 Rh2DG375700 Rh2DG384300 Rh2DG487000 Rh2DG504000 Rh2DG504100 Rh3AG311800 Rh3AG327500 Rh3AG328300 Rh3BG345100 Rh3CG320100 Rh4AG005700 Rh4AG067900 Rh4AG068000 Rh4AG084400 Rh4AG106700 Rh4AG160000 Rh4AG173900 Rh4AG174000 Rh4CG125300 Rh4CG125500 Rh4CG264500 Rh4DG110800 Rh5AG047300 Rh5AG085200 Rh5AG126300 Rh5AG127300 Rh5AG203000 Rh5AG332400 Rh5AG332500 Rh5AG342400 Rh5AG344100 Rh5AG375600 Rh5AG378300 Rh5AG386000 Rh5AG529600 Rh5BG125200 Rh5CG137600 Rh5CG137700 Rh5DG125200 Rh6BG134100 Rh6BG175400 Rh6BG179500 Rh6BG179600 Rh6BG181600 Rh6BG181700 Rh6BG191100 Rh6BG232900 Rh6BG259700 Rh6BG259800 Rh7AG028000 Rh7AG319400 Rh7AG352700 Rh7AG352800 Rh7AG352900 Rh7AG482500 Rh7AG482600 Rh7AG503800 Rh7BG334700 Rh7CG200100 Rh7CG336200 Rh7CG370200 Rh7CG370400 Rh7CG370500
rosa_wichuraiana Rw1G001580 Rw1G003570 Rw1G004260 Rw1G004270 Rw1G021170 Rw2G019390 Rw2G040280 Rw2G044050 Rw4G004430 Rw5G010950 Rw5G018350 Rw5G032890 Rw6G002840 Rw6G006510 Rw6G007780 Rw6G033790 Rw7G036320 Rw7G040550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 665
Acc16I TGCGCA 1 cut(s) 594
AccII CGCG 1 cut(s) 501
AciI CCGC 6 cut(s) 160, 205, 296, 315, 499, 648
AclI AACGTT 1 cut(s) 660
AclWI GGATC 1 cut(s) 625
AcoI YGGCCR 3 cut(s) 316, 496, 645
AcsI RAATTY 1 cut(s) 122
AcuI CTGAAG 1 cut(s) 300
AfaI GTAC 1 cut(s) 76
AflIII ACRYGT 1 cut(s) 34
AgsI TTSAA 6 cut(s) 49, 190, 329, 583, 657, 743
AhdI GACNNNNNGTC 1 cut(s) 231
AluBI AGCT 5 cut(s) 80, 439, 605, 610, 697
AluI AGCT 5 cut(s) 80, 439, 605, 610, 697
Alw21I GWGCWC 1 cut(s) 699
Alw26I GTCTC 1 cut(s) 19
AlwI GGATC 1 cut(s) 625
AoxI GGCC 4 cut(s) 316, 351, 496, 645
ApeKI GCWGC 2 cut(s) 551, 650
ApoI RAATTY 1 cut(s) 122
Asp700I GAANNNNTTC 1 cut(s) 399
AspLEI GCGC 3 cut(s) 503, 595, 642
AspS9I GGNCC 1 cut(s) 521
AsuC2I CCSGG 1 cut(s) 635
AsuHPI GGTGA 2 cut(s) 191, 553
AvaII GGWCC 1 cut(s) 521
BanII GRGCYC 2 cut(s) 302, 699
Bbv12I GWGCWC 1 cut(s) 699
BbvI GCAGC 2 cut(s) 538, 637
BccI CCATC 3 cut(s) 46, 194, 224
BcgI CGANNNNNNTGC 2 cut(s) 344, 378
BclI TGATCA 1 cut(s) 418
BcnI CCSGG 1 cut(s) 635
BcoDI GTCTC 1 cut(s) 19
BfaI CTAG 2 cut(s) 440, 611
BglII AGATCT 1 cut(s) 807
BisI GCNGC 5 cut(s) 316, 499, 552, 648, 651
BlpI GCTNAGC 1 cut(s) 606
BlsI GCNGC 5 cut(s) 317, 500, 553, 649, 652
Bme1390I CCNGG 1 cut(s) 635
Bme18I GGWCC 1 cut(s) 521
BmeRI GACNNNNNGTC 1 cut(s) 231
BmgT120I GGNCC 1 cut(s) 521
BmiI GGNNCC 1 cut(s) 57
BmrFI CCNGG 1 cut(s) 635
BmrI ACTGGG 1 cut(s) 799
BmsI GCATC 2 cut(s) 544, 580
BmuI ACTGGG 1 cut(s) 799
BplI GAGNNNNNCTC 2 cut(s) 416, 448
BpmI CTGGAG 1 cut(s) 231
Bpu10I CCTNAGC 1 cut(s) 253
Bpu1102I GCTNAGC 1 cut(s) 606
BpuEI CTTGAG 1 cut(s) 683
BpuMI CCSGG 1 cut(s) 635
BsaJI CCNNGG 1 cut(s) 169
Bse1I ACTGG 3 cut(s) 499, 620, 794
Bse3DI GCAATG 1 cut(s) 774
BseDI CCNNGG 1 cut(s) 169
BseMI GCAATG 1 cut(s) 774
BseMII CTCAG 2 cut(s) 24, 597
BseNI ACTGG 3 cut(s) 499, 620, 794
BseXI GCAGC 2 cut(s) 538, 637
Bsh1236I CGCG 1 cut(s) 501
BshFI GGCC 4 cut(s) 318, 353, 498, 647
BsiHKAI GWGCWC 1 cut(s) 699
BsiSI CCGG 1 cut(s) 634
BslFI GGGAC 2 cut(s) 503, 737
BsmAI GTCTC 1 cut(s) 19
BsmFI GGGAC 2 cut(s) 503, 737
BsnI GGCC 4 cut(s) 318, 353, 498, 647
Bsp1286I GDGCHC 2 cut(s) 302, 699
Bsp1407I TGTACA 1 cut(s) 74
Bsp143I GATC 5 cut(s) 418, 426, 630, 754, 807
Bsp1720I GCTNAGC 1 cut(s) 606
BspACI CCGC 6 cut(s) 160, 205, 296, 315, 499, 648
BspANI GGCC 4 cut(s) 318, 353, 498, 647
BspCNI CTCAG 2 cut(s) 23, 598
BspFNI CGCG 1 cut(s) 501
BspHI TCATGA 3 cut(s) 412, 421, 688
BspLI GGNNCC 1 cut(s) 57
BspPI GGATC 1 cut(s) 625
BspQI GCTCTTC 2 cut(s) 185, 687
BsrDI GCAATG 1 cut(s) 774
BsrGI TGTACA 1 cut(s) 74
BsrI ACTGG 3 cut(s) 499, 620, 794
BssECI CCNNGG 1 cut(s) 169
BssMI GATC 5 cut(s) 418, 426, 630, 754, 807
BssT1I CCWWGG 1 cut(s) 169
Bst4CI ACNGT 1 cut(s) 150
Bst6I CTCTTC 2 cut(s) 185, 687
BstAUI TGTACA 1 cut(s) 74
BstC8I GCNNGC 1 cut(s) 298
BstDEI CTNAG 3 cut(s) 10, 253, 606
BstFNI CGCG 1 cut(s) 501
BstHHI GCGC 3 cut(s) 503, 595, 642
BstKTI GATC 5 cut(s) 421, 429, 633, 757, 810
BstMAI GTCTC 1 cut(s) 19
BstMBI GATC 5 cut(s) 418, 426, 630, 754, 807
BstNSI RCATGY 1 cut(s) 476
BstSCI CCNGG 1 cut(s) 633
BstUI CGCG 1 cut(s) 501
BstV1I GCAGC 2 cut(s) 538, 637
BstX2I RGATCY 1 cut(s) 807
BstXI CCANNNNNNTGG 1 cut(s) 176
BstYI RGATCY 1 cut(s) 807
BsuRI GGCC 4 cut(s) 318, 353, 498, 647
BtsIMutI CAGTG 3 cut(s) 460, 492, 627
Cac8I GCNNGC 1 cut(s) 298
CciI TCATGA 3 cut(s) 412, 421, 688
CfoI GCGC 3 cut(s) 503, 595, 642
Cfr13I GGNCC 1 cut(s) 521
CseI GACGC 1 cut(s) 791
Csp6I GTAC 1 cut(s) 75
CviAII CATG 7 cut(s) 413, 422, 473, 643, 689, 716, 752
CviQI GTAC 1 cut(s) 75
DdeI CTNAG 3 cut(s) 10, 253, 606
DpnI GATC 5 cut(s) 420, 428, 632, 756, 809
DpnII GATC 5 cut(s) 418, 426, 630, 754, 807
DraI TTTAAA 1 cut(s) 141
DriI GACNNNNNGTC 1 cut(s) 231
EaeI YGGCCR 3 cut(s) 316, 496, 645
Eam1104I CTCTTC 2 cut(s) 185, 687
Eam1105I GACNNNNNGTC 1 cut(s) 231
EarI CTCTTC 2 cut(s) 185, 687
EciI GGCGGA 1 cut(s) 220
Ecl136II GAGCTC 1 cut(s) 697
Eco130I CCWWGG 1 cut(s) 169
Eco24I GRGCYC 2 cut(s) 302, 699
Eco32I GATATC 1 cut(s) 184
Eco47I GGWCC 1 cut(s) 521
Eco53kI GAGCTC 1 cut(s) 697
Eco57I CTGAAG 1 cut(s) 300
EcoICRI GAGCTC 1 cut(s) 697
EcoRV GATATC 1 cut(s) 184
EcoT14I CCWWGG 1 cut(s) 169
EcoT38I GRGCYC 2 cut(s) 302, 699
ErhI CCWWGG 1 cut(s) 169
FaeI CATG 7 cut(s) 416, 425, 476, 646, 692, 719, 755
FaqI GGGAC 2 cut(s) 503, 737
FatI CATG 7 cut(s) 412, 421, 472, 642, 688, 715, 751
FauI CCCGC 1 cut(s) 289
FbaI TGATCA 1 cut(s) 418
Fnu4HI GCNGC 5 cut(s) 316, 499, 552, 648, 651
FriOI GRGCYC 2 cut(s) 302, 699
Fsp4HI GCNGC 5 cut(s) 316, 499, 552, 648, 651
FspBI CTAG 2 cut(s) 440, 611
FspI TGCGCA 1 cut(s) 594
GlaI GCGC 3 cut(s) 502, 594, 641
GluI GCNGC 5 cut(s) 316, 499, 552, 648, 651
GsuI CTGGAG 1 cut(s) 231
HaeIII GGCC 4 cut(s) 318, 353, 498, 647
HapII CCGG 1 cut(s) 634
HgaI GACGC 1 cut(s) 791
HhaI GCGC 3 cut(s) 503, 595, 642
Hin1II CATG 7 cut(s) 416, 425, 476, 646, 692, 719, 755
Hin6I GCGC 3 cut(s) 501, 593, 640
HinP1I GCGC 3 cut(s) 501, 593, 640
HincII GTYRAC 1 cut(s) 130
HindII GTYRAC 1 cut(s) 130
HinfI GANTC 3 cut(s) 8, 395, 616
HpaII CCGG 1 cut(s) 634
HphI GGTGA 2 cut(s) 191, 553
Hpy166II GTNNAC 2 cut(s) 130, 153
Hpy188I TCNGA 3 cut(s) 109, 280, 304
Hpy188III TCNNGA 8 cut(s) 18, 49, 187, 371, 413, 422, 689, 758
Hpy8I GTNNAC 2 cut(s) 130, 153
Hpy99I CGWCG 1 cut(s) 24
HpyCH4III ACNGT 1 cut(s) 150
HpyCH4IV ACGT 3 cut(s) 22, 34, 660
HpyF3I CTNAG 3 cut(s) 10, 253, 606
HpySE526I ACGT 3 cut(s) 22, 34, 660
Hsp92II CATG 7 cut(s) 416, 425, 476, 646, 692, 719, 755
HspAI GCGC 3 cut(s) 501, 593, 640
Ksp22I TGATCA 1 cut(s) 418
Kzo9I GATC 5 cut(s) 418, 426, 630, 754, 807
LguI GCTCTTC 2 cut(s) 185, 687
LmnI GCTCC 3 cut(s) 55, 532, 637
LpnPI CCDG 8 cut(s) 147, 261, 306, 335, 480, 633, 647, 775
Lsp1109I GCAGC 2 cut(s) 538, 637
LweI GCATC 2 cut(s) 544, 580
MaeI CTAG 2 cut(s) 440, 611
MaeII ACGT 3 cut(s) 22, 34, 660
MaeIII GTNAC 3 cut(s) 5, 23, 442
MalI GATC 5 cut(s) 420, 428, 632, 756, 809
MboI GATC 5 cut(s) 418, 426, 630, 754, 807
MboII GAAGA 7 cut(s) 202, 222, 293, 534, 704, 784, 817
MflI RGATCY 1 cut(s) 807
MhlI GDGCHC 2 cut(s) 302, 699
MluCI AATT 5 cut(s) 97, 122, 329, 387, 459
MlyI GAGTC 2 cut(s) 2, 625
MnlI CCTC 2 cut(s) 367, 540
MroXI GAANNNNTTC 1 cut(s) 399
MseI TTAA 3 cut(s) 96, 140, 386
MspA1I CMGCKG 3 cut(s) 160, 315, 650
MspI CCGG 1 cut(s) 634
MspR9I CCNGG 1 cut(s) 635
MvnI CGCG 1 cut(s) 501
NciI CCSGG 1 cut(s) 635
NdeII GATC 5 cut(s) 418, 426, 630, 754, 807
NlaIII CATG 7 cut(s) 416, 425, 476, 646, 692, 719, 755
NlaIV GGNNCC 1 cut(s) 57
NmuCI GTSAC 1 cut(s) 5
NsbI TGCGCA 1 cut(s) 594
NspI RCATGY 1 cut(s) 476
PagI TCATGA 3 cut(s) 412, 421, 688
PciSI GCTCTTC 2 cut(s) 185, 687
PcsI WCGNNNNNNNCGW 1 cut(s) 551
PdmI GAANNNNTTC 1 cut(s) 399
PfeI GAWTC 1 cut(s) 395
PflFI GACNNNGTC 1 cut(s) 11
PfoI TCCNGGA 1 cut(s) 633
PkrI GCNGC 5 cut(s) 317, 500, 553, 649, 652
PleI GAGTC 2 cut(s) 2, 624
PpsI GAGTC 2 cut(s) 2, 624
PsiI TTATAA 1 cut(s) 665
Psp124BI GAGCTC 1 cut(s) 699
Psp1406I AACGTT 1 cut(s) 660
PspN4I GGNNCC 1 cut(s) 57
PspPI GGNCC 1 cut(s) 521
PsuI RGATCY 1 cut(s) 807
PsyI GACNNNGTC 1 cut(s) 11
RsaI GTAC 1 cut(s) 76
RsaNI GTAC 1 cut(s) 75
SacI GAGCTC 1 cut(s) 699
SapI GCTCTTC 2 cut(s) 185, 687
SaqAI TTAA 3 cut(s) 96, 140, 386
SatI GCNGC 5 cut(s) 316, 499, 552, 648, 651
Sau3AI GATC 5 cut(s) 418, 426, 630, 754, 807
Sau96I GGNCC 1 cut(s) 521
SchI GAGTC 2 cut(s) 2, 625
ScrFI CCNGG 1 cut(s) 635
SduI GDGCHC 2 cut(s) 302, 699
SetI ASST 9 cut(s) 25, 37, 82, 441, 526, 607, 612, 663, 699
SfaNI GCATC 2 cut(s) 544, 580
SinI GGWCC 1 cut(s) 521
SmlI CTYRAG 1 cut(s) 698
SmoI CTYRAG 1 cut(s) 698
Sse9I AATT 5 cut(s) 97, 122, 329, 387, 459
SsiI CCGC 6 cut(s) 160, 205, 296, 315, 499, 648
SspI AATATT 1 cut(s) 287
SspMI CTAG 2 cut(s) 440, 611
SstI GAGCTC 1 cut(s) 699
StyD4I CCNGG 1 cut(s) 633
StyI CCWWGG 1 cut(s) 169
TaaI ACNGT 1 cut(s) 150
TaiI ACGT 3 cut(s) 25, 37, 663
TaqI TCGA 1 cut(s) 545
TasI AATT 5 cut(s) 97, 122, 329, 387, 459
TatI WGTACW 1 cut(s) 74
TauI GCSGC 3 cut(s) 318, 501, 650
TfiI GAWTC 1 cut(s) 395
Tru1I TTAA 3 cut(s) 96, 140, 386
Tru9I TTAA 3 cut(s) 96, 140, 386
TscAI CASTG 3 cut(s) 460, 499, 627
TseFI GTSAC 1 cut(s) 5
TseI GCWGC 2 cut(s) 551, 650
Tsp45I GTSAC 1 cut(s) 5
TspDTI ATGAA 7 cut(s) 258, 360, 392, 401, 705, 777, 785
TspGWI ACGGA 1 cut(s) 560
TspRI CASTG 3 cut(s) 460, 499, 627
Tth111I GACNNNGTC 1 cut(s) 11
VpaK11BI GGWCC 1 cut(s) 521
XapI RAATTY 1 cut(s) 122
XceI RCATGY 1 cut(s) 476
XmnI GAANNNNTTC 1 cut(s) 399
XspI CTAG 2 cut(s) 440, 611
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.