dipeptidyl-peptidase activity
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PMD | PF10536 | 131 - 514 | 6.4e-43 | Plant mobile domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2582 |
| Acc36I | ACCTGC | 1 cut(s) | 2582 |
| AccB1I | GGYRCC | 3 cut(s) | 346, 1286, 2748 |
| AccI | GTMKAC | 3 cut(s) | 1016, 1544, 1736 |
| AccII | CGCG | 4 cut(s) | 197, 307, 1094, 1934 |
| AclWI | GGATC | 5 cut(s) | 444, 1680, 1693, 1918, 2367 |
| AcsI | RAATTY | 7 cut(s) | 61, 124, 587, 836, 946, 1214, 1783 |
| AcuI | CTGAAG | 1 cut(s) | 2451 |
| AcvI | CACGTG | 1 cut(s) | 2159 |
| AcyI | GRCGYC | 2 cut(s) | 1917, 2749 |
| AfaI | GTAC | 4 cut(s) | 225, 2221, 2556, 2615 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 333, 451, 1296, 1634, 1933, 2233, 2273, 2300 |
| AflIII | ACRYGT | 2 cut(s) | 246, 1019 |
| AjiI | CACGTC | 2 cut(s) | 249, 1337 |
| AjnI | CCWGG | 1 cut(s) | 281 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1449, 1481, 2654, 2686 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2750, 2782 |
| Alw21I | GWGCWC | 5 cut(s) | 176, 768, 830, 1011, 2338 |
| Alw26I | GTCTC | 2 cut(s) | 1257, 2468 |
| Alw44I | GTGCAC | 2 cut(s) | 172, 826 |
| AlwI | GGATC | 5 cut(s) | 444, 1680, 1693, 1918, 2367 |
| Ama87I | CYCGRG | 2 cut(s) | 23, 1260 |
| ApaLI | GTGCAC | 2 cut(s) | 172, 826 |
| ApeKI | GCWGC | 3 cut(s) | 42, 722, 2707 |
| ApoI | RAATTY | 7 cut(s) | 61, 124, 587, 836, 946, 1214, 1783 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 505, 537, 1814, 1846 |
| AspLEI | GCGC | 3 cut(s) | 1096, 1934, 2751 |
| AsuC2I | CCSGG | 1 cut(s) | 31 |
| AsuHPI | GGTGA | 7 cut(s) | 1160, 1925, 1997, 2081, 2384, 2606, 2774 |
| AsuII | TTCGAA | 1 cut(s) | 1613 |
| AvaI | CYCGRG | 2 cut(s) | 23, 1260 |
| AvaII | GGWCC | 5 cut(s) | 276, 506, 1482, 1584, 2386 |
| BaeGI | GKGCMC | 2 cut(s) | 176, 830 |
| BalI | TGGCCA | 2 cut(s) | 1854, 2646 |
| BamHI | GGATCC | 1 cut(s) | 1685 |
| BanI | GGYRCC | 3 cut(s) | 346, 1286, 2748 |
| BanII | GRGCYC | 1 cut(s) | 1011 |
| BauI | CACGAG | 2 cut(s) | 761, 2422 |
| BbrPI | CACGTG | 1 cut(s) | 2159 |
| BbsI | GAAGAC | 1 cut(s) | 2669 |
| Bbv12I | GWGCWC | 5 cut(s) | 176, 768, 830, 1011, 2338 |
| BbvI | GCAGC | 3 cut(s) | 54, 734, 2719 |
| BccI | CCATC | 8 cut(s) | 349, 1403, 1655, 1844, 1994, 2190, 2347, 2760 |
| BceAI | ACGGC | 2 cut(s) | 1038, 1424 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 711, 745 |
| BciT130I | CCWGG | 1 cut(s) | 283 |
| BciVI | GTATCC | 1 cut(s) | 981 |
| BclI | TGATCA | 2 cut(s) | 1507, 2011 |
| BcnI | CCSGG | 1 cut(s) | 31 |
| BcoDI | GTCTC | 2 cut(s) | 1257, 2468 |
| BfmI | CTRYAG | 1 cut(s) | 688 |
| BfoI | RGCGCY | 1 cut(s) | 2752 |
| BfuAI | ACCTGC | 1 cut(s) | 2582 |
| BfuI | GTATCC | 1 cut(s) | 981 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1284 |
| BglII | AGATCT | 1 cut(s) | 2777 |
| BmcAI | AGTACT | 1 cut(s) | 2556 |
| Bme1390I | CCNGG | 2 cut(s) | 31, 283 |
| Bme18I | GGWCC | 5 cut(s) | 276, 506, 1482, 1584, 2386 |
| BmeT110I | CYCGRG | 2 cut(s) | 23, 1260 |
| BmgBI | CACGTC | 2 cut(s) | 249, 1337 |
| BmrFI | CCNGG | 2 cut(s) | 31, 283 |
| BmrI | ACTGGG | 1 cut(s) | 188 |
| BmsI | GCATC | 5 cut(s) | 91, 709, 1849, 2106, 2143 |
| BmuI | ACTGGG | 1 cut(s) | 188 |
| BpiI | GAAGAC | 1 cut(s) | 2669 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 733, 765 |
| BpmI | CTGGAG | 1 cut(s) | 304 |
| Bpu10I | CCTNAGC | 1 cut(s) | 666 |
| Bpu14I | TTCGAA | 1 cut(s) | 1613 |
| BpuEI | CTTGAG | 2 cut(s) | 1202, 2492 |
| BpuMI | CCSGG | 1 cut(s) | 31 |
| Bsa29I | ATCGAT | 1 cut(s) | 936 |
| BsaAI | YACGTR | 1 cut(s) | 2159 |
| BsaHI | GRCGYC | 2 cut(s) | 1917, 2749 |
| BsaI | GGTCTC | 1 cut(s) | 1257 |
| BsaWI | WCCGGW | 2 cut(s) | 1011, 1657 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1009, 1039, 2275, 2305 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 333, 451, 1296, 1634, 1933, 2233, 2273, 2300 |
| Bse1I | ACTGG | 2 cut(s) | 183, 1915 |
| Bse3DI | GCAATG | 1 cut(s) | 931 |
| BseBI | CCWGG | 1 cut(s) | 283 |
| BseCI | ATCGAT | 1 cut(s) | 936 |
| BseGI | GGATG | 9 cut(s) | 360, 978, 1231, 1666, 1852, 2143, 2260, 2310, 2752 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 333, 451, 1296, 1634, 1933, 2233, 2273, 2300 |
| BseMI | GCAATG | 1 cut(s) | 931 |
| BseMII | CTCAG | 5 cut(s) | 282, 321, 1442, 2594, 2693 |
| BseNI | ACTGG | 2 cut(s) | 183, 1915 |
| BseRI | GAGGAG | 1 cut(s) | 2280 |
| BseSI | GKGCMC | 2 cut(s) | 176, 830 |
| BseX3I | CGGCCG | 4 cut(s) | 66, 554, 1437, 2346 |
| BseXI | GCAGC | 3 cut(s) | 54, 734, 2719 |
| BseYI | CCCAGC | 2 cut(s) | 163, 1580 |
| Bsh1236I | CGCG | 4 cut(s) | 197, 307, 1094, 1934 |
| Bsh1285I | CGRYCG | 5 cut(s) | 69, 557, 1016, 1440, 2349 |
| BshNI | GGYRCC | 3 cut(s) | 346, 1286, 2748 |
| BshVI | ATCGAT | 1 cut(s) | 936 |
| BsiEI | CGRYCG | 5 cut(s) | 69, 557, 1016, 1440, 2349 |
| BsiHKAI | GWGCWC | 5 cut(s) | 176, 768, 830, 1011, 2338 |
| BsiHKCI | CYCGRG | 2 cut(s) | 23, 1260 |
| BsiSI | CCGG | 5 cut(s) | 30, 1012, 1364, 1485, 1658 |
| BslFI | GGGAC | 3 cut(s) | 492, 1019, 1597 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 333, 451, 1296, 1634, 1933, 2233, 2273, 2300 |
| BsmAI | GTCTC | 2 cut(s) | 1257, 2468 |
| BsmBI | CGTCTC | 1 cut(s) | 2468 |
| BsmFI | GGGAC | 3 cut(s) | 492, 1019, 1597 |
| Bso31I | GGTCTC | 1 cut(s) | 1257 |
| BsoBI | CYCGRG | 2 cut(s) | 23, 1260 |
| Bsp119I | TTCGAA | 1 cut(s) | 1613 |
| Bsp1286I | GDGCHC | 5 cut(s) | 176, 768, 830, 1011, 2338 |
| Bsp19I | CCATGG | 1 cut(s) | 1202 |
| BspCNI | CTCAG | 5 cut(s) | 283, 322, 1441, 2593, 2694 |
| BspDI | ATCGAT | 1 cut(s) | 936 |
| BspFNI | CGCG | 4 cut(s) | 197, 307, 1094, 1934 |
| BspHI | TCATGA | 3 cut(s) | 213, 1003, 1554 |
| BspMI | ACCTGC | 1 cut(s) | 2582 |
| BspPI | GGATC | 5 cut(s) | 444, 1680, 1693, 1918, 2367 |
| BspQI | GCTCTTC | 2 cut(s) | 1452, 2244 |
| BspT104I | TTCGAA | 1 cut(s) | 1613 |
| BspT107I | GGYRCC | 3 cut(s) | 346, 1286, 2748 |
| BspTNI | GGTCTC | 1 cut(s) | 1257 |
| BsrDI | GCAATG | 1 cut(s) | 931 |
| BsrI | ACTGG | 2 cut(s) | 183, 1915 |
| BssNAI | GTATAC | 1 cut(s) | 1737 |
| BssNI | GRCGYC | 2 cut(s) | 1917, 2749 |
| BssSI | CACGAG | 2 cut(s) | 761, 2422 |
| BssT1I | CCWWGG | 6 cut(s) | 350, 883, 1069, 1202, 1629, 2133 |
| Bst1107I | GTATAC | 1 cut(s) | 1737 |
| Bst2BI | CACGAG | 2 cut(s) | 761, 2422 |
| Bst2UI | CCWGG | 1 cut(s) | 283 |
| Bst4CI | ACNGT | 7 cut(s) | 914, 1291, 1643, 2368, 2479, 2487, 2512 |
| Bst6I | CTCTTC | 3 cut(s) | 1452, 2244, 2427 |
| BstACI | GRCGYC | 2 cut(s) | 1917, 2749 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 719, 2692 |
| BstBAI | YACGTR | 1 cut(s) | 2159 |
| BstBI | TTCGAA | 1 cut(s) | 1613 |
| BstC8I | GCNNGC | 8 cut(s) | 144, 199, 203, 457, 768, 904, 2112, 2322 |
| BstDEI | CTNAG | 6 cut(s) | 291, 330, 666, 1428, 2580, 2702 |
| BstDSI | CCRYGG | 4 cut(s) | 129, 305, 1202, 1290 |
| BstEII | GGTNACC | 1 cut(s) | 1985 |
| BstF5I | GGATG | 9 cut(s) | 360, 978, 1231, 1666, 1852, 2143, 2260, 2310, 2752 |
| BstFNI | CGCG | 4 cut(s) | 197, 307, 1094, 1934 |
| BstH2I | RGCGCY | 1 cut(s) | 2752 |
| BstHHI | GCGC | 3 cut(s) | 1096, 1934, 2751 |
| BstMAI | GTCTC | 2 cut(s) | 1257, 2468 |
| BstMCI | CGRYCG | 5 cut(s) | 69, 557, 1016, 1440, 2349 |
| BstNI | CCWGG | 1 cut(s) | 283 |
| BstNSI | RCATGY | 2 cut(s) | 713, 1023 |
| BstPI | GGTNACC | 1 cut(s) | 1985 |
| BstSCI | CCNGG | 2 cut(s) | 29, 281 |
| BstSFI | CTRYAG | 1 cut(s) | 688 |
| BstSLI | GKGCMC | 2 cut(s) | 176, 830 |
| BstUI | CGCG | 4 cut(s) | 197, 307, 1094, 1934 |
| BstV1I | GCAGC | 3 cut(s) | 54, 734, 2719 |
| BstV2I | GAAGAC | 1 cut(s) | 2669 |
| BstX2I | RGATCY | 2 cut(s) | 1685, 2777 |
| BstYI | RGATCY | 2 cut(s) | 1685, 2777 |
| BstZ17I | GTATAC | 1 cut(s) | 1737 |
| BstZI | CGGCCG | 4 cut(s) | 66, 554, 1437, 2346 |
| Bsu15I | ATCGAT | 1 cut(s) | 936 |
| BsuI | GTATCC | 1 cut(s) | 981 |
| BsuTUI | ATCGAT | 1 cut(s) | 936 |
| BtgI | CCRYGG | 4 cut(s) | 129, 305, 1202, 1290 |
| BtrI | CACGTC | 2 cut(s) | 249, 1337 |
| BtsCI | GGATG | 9 cut(s) | 360, 978, 1231, 1666, 1852, 2143, 2260, 2310, 2752 |
| BtsI | GCAGTG | 2 cut(s) | 936, 1103 |
| BtsIMutI | CAGTG | 6 cut(s) | 176, 936, 1103, 1436, 2373, 2517 |
| BveI | ACCTGC | 1 cut(s) | 2582 |
| Cac8I | GCNNGC | 8 cut(s) | 144, 199, 203, 457, 768, 904, 2112, 2322 |
| CciI | TCATGA | 3 cut(s) | 213, 1003, 1554 |
| CfoI | GCGC | 3 cut(s) | 1096, 1934, 2751 |
| Cfr42I | CCGCGG | 1 cut(s) | 308 |
| ClaI | ATCGAT | 1 cut(s) | 936 |
| CseI | GACGC | 2 cut(s) | 665, 1925 |
| Csp6I | GTAC | 4 cut(s) | 224, 2220, 2555, 2614 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1520, 1555, 2623, 2658 |
| CviQI | GTAC | 4 cut(s) | 224, 2220, 2555, 2614 |
| DdeI | CTNAG | 6 cut(s) | 291, 330, 666, 1428, 2580, 2702 |
| DinI | GGCGCC | 1 cut(s) | 2750 |
| EagI | CGGCCG | 4 cut(s) | 66, 554, 1437, 2346 |
| Eam1104I | CTCTTC | 3 cut(s) | 1452, 2244, 2427 |
| EarI | CTCTTC | 3 cut(s) | 1452, 2244, 2427 |
| Ecl136II | GAGCTC | 1 cut(s) | 1009 |
| EclXI | CGGCCG | 4 cut(s) | 66, 554, 1437, 2346 |
| Eco130I | CCWWGG | 6 cut(s) | 350, 883, 1069, 1202, 1629, 2133 |
| Eco147I | AGGCCT | 1 cut(s) | 874 |
| Eco24I | GRGCYC | 1 cut(s) | 1011 |
| Eco31I | GGTCTC | 1 cut(s) | 1257 |
| Eco47I | GGWCC | 5 cut(s) | 276, 506, 1482, 1584, 2386 |
| Eco52I | CGGCCG | 4 cut(s) | 66, 554, 1437, 2346 |
| Eco53kI | GAGCTC | 1 cut(s) | 1009 |
| Eco57I | CTGAAG | 1 cut(s) | 2451 |
| Eco72I | CACGTG | 1 cut(s) | 2159 |
| Eco88I | CYCGRG | 2 cut(s) | 23, 1260 |
| Eco91I | GGTNACC | 1 cut(s) | 1985 |
| EcoICRI | GAGCTC | 1 cut(s) | 1009 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1584, 1625 |
| EcoO65I | GGTNACC | 1 cut(s) | 1985 |
| EcoRI | GAATTC | 1 cut(s) | 1783 |
| EcoRII | CCWGG | 1 cut(s) | 281 |
| EcoT14I | CCWWGG | 6 cut(s) | 350, 883, 1069, 1202, 1629, 2133 |
| EcoT38I | GRGCYC | 1 cut(s) | 1011 |
| EgeI | GGCGCC | 1 cut(s) | 2750 |
| EheI | GGCGCC | 1 cut(s) | 2750 |
| ErhI | CCWWGG | 6 cut(s) | 350, 883, 1069, 1202, 1629, 2133 |
| Esp3I | CGTCTC | 1 cut(s) | 2468 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 102, 134 |
| FaqI | GGGAC | 3 cut(s) | 492, 1019, 1597 |
| FauI | CCCGC | 2 cut(s) | 190, 300 |
| FauNDI | CATATG | 2 cut(s) | 432, 1151 |
| FbaI | TGATCA | 2 cut(s) | 1507, 2011 |
| FblI | GTMKAC | 3 cut(s) | 1016, 1544, 1736 |
| FokI | GGATG | 9 cut(s) | 367, 985, 1238, 1673, 1859, 2150, 2247, 2317, 2739 |
| FriOI | GRGCYC | 1 cut(s) | 1011 |
| GlaI | GCGC | 3 cut(s) | 1095, 1933, 2750 |
| GsaI | CCCAGC | 2 cut(s) | 167, 1584 |
| GsuI | CTGGAG | 1 cut(s) | 304 |
| HaeII | RGCGCY | 1 cut(s) | 2752 |
| HapII | CCGG | 5 cut(s) | 30, 1012, 1364, 1485, 1658 |
| HgaI | GACGC | 2 cut(s) | 665, 1925 |
| HhaI | GCGC | 3 cut(s) | 1096, 1934, 2751 |
| Hin1I | GRCGYC | 2 cut(s) | 1917, 2749 |
| Hin6I | GCGC | 3 cut(s) | 1094, 1932, 2749 |
| HinP1I | GCGC | 3 cut(s) | 1094, 1932, 2749 |
| HincII | GTYRAC | 3 cut(s) | 244, 1017, 1545 |
| HindII | GTYRAC | 3 cut(s) | 244, 1017, 1545 |
| HindIII | AAGCTT | 2 cut(s) | 855, 1533 |
| HinfI | GANTC | 6 cut(s) | 427, 1231, 1937, 2207, 2255, 2425 |
| HpaII | CCGG | 5 cut(s) | 30, 1012, 1364, 1485, 1658 |
| HphI | GGTGA | 7 cut(s) | 1160, 1925, 1997, 2081, 2384, 2606, 2774 |
| Hpy166II | GTNNAC | 8 cut(s) | 174, 244, 279, 828, 1017, 1416, 1545, 1737 |
| Hpy8I | GTNNAC | 8 cut(s) | 174, 244, 279, 828, 1017, 1416, 1545, 1737 |
| Hpy99I | CGWCG | 2 cut(s) | 11, 1804 |
| HpyCH4III | ACNGT | 7 cut(s) | 914, 1291, 1643, 2368, 2479, 2487, 2512 |
| HpyCH4IV | ACGT | 5 cut(s) | 248, 1336, 1591, 1883, 2158 |
| HpyCH4V | TGCA | 8 cut(s) | 174, 713, 722, 828, 851, 929, 1334, 2156 |
| HpyF3I | CTNAG | 6 cut(s) | 291, 330, 666, 1428, 2580, 2702 |
| HpySE526I | ACGT | 5 cut(s) | 248, 1336, 1591, 1883, 2158 |
| Hsp92I | GRCGYC | 2 cut(s) | 1917, 2749 |
| HspAI | GCGC | 3 cut(s) | 1094, 1932, 2749 |
| KasI | GGCGCC | 1 cut(s) | 2748 |
| KflI | GGGWCCC | 1 cut(s) | 1584 |
| Ksp22I | TGATCA | 2 cut(s) | 1507, 2011 |
| KspI | CCGCGG | 1 cut(s) | 308 |
| LguI | GCTCTTC | 2 cut(s) | 1452, 2244 |
| LmnI | GCTCC | 6 cut(s) | 336, 358, 418, 815, 1014, 2341 |
| Lsp1109I | GCAGC | 3 cut(s) | 54, 734, 2719 |
| LweI | GCATC | 5 cut(s) | 91, 709, 1849, 2106, 2143 |
| MaeII | ACGT | 5 cut(s) | 248, 1336, 1591, 1883, 2158 |
| MaeIII | GTNAC | 8 cut(s) | 1154, 1445, 1637, 1789, 1913, 1985, 2512, 2739 |
| MboII | GAAGA | 9 cut(s) | 1310, 1469, 1660, 1723, 1976, 2231, 2334, 2444, 2674 |
| MflI | RGATCY | 2 cut(s) | 1685, 2777 |
| MhlI | GDGCHC | 5 cut(s) | 176, 768, 830, 1011, 2338 |
| MlsI | TGGCCA | 2 cut(s) | 1854, 2646 |
| MluNI | TGGCCA | 2 cut(s) | 1854, 2646 |
| Mly113I | GGCGCC | 1 cut(s) | 2749 |
| MlyI | GAGTC | 2 cut(s) | 1931, 2434 |
| MmeI | TCCRAC | 2 cut(s) | 15, 1203 |
| Mox20I | TGGCCA | 2 cut(s) | 1854, 2646 |
| MscI | TGGCCA | 2 cut(s) | 1854, 2646 |
| MseI | TTAA | 3 cut(s) | 87, 408, 1670 |
| Msp20I | TGGCCA | 2 cut(s) | 1854, 2646 |
| MspA1I | CMGCKG | 4 cut(s) | 142, 163, 208, 307 |
| MspI | CCGG | 5 cut(s) | 30, 1012, 1364, 1485, 1658 |
| MspR9I | CCNGG | 2 cut(s) | 31, 283 |
| MvaI | CCWGG | 1 cut(s) | 283 |
| MvnI | CGCG | 4 cut(s) | 197, 307, 1094, 1934 |
| NarI | GGCGCC | 1 cut(s) | 2749 |
| NciI | CCSGG | 1 cut(s) | 31 |
| NcoI | CCATGG | 1 cut(s) | 1202 |
| NdeI | CATATG | 2 cut(s) | 432, 1151 |
| NmeAIII | GCCGAG | 5 cut(s) | 94, 1187, 1919, 2189, 2374 |
| NmuCI | GTSAC | 5 cut(s) | 1789, 1913, 1985, 2512, 2739 |
| NspI | RCATGY | 2 cut(s) | 713, 1023 |
| NspV | TTCGAA | 1 cut(s) | 1613 |
| PaeR7I | CTCGAG | 2 cut(s) | 23, 1260 |
| PagI | TCATGA | 3 cut(s) | 213, 1003, 1554 |
| PaqCI | CACCTGC | 1 cut(s) | 2582 |
| PceI | AGGCCT | 1 cut(s) | 874 |
| PciI | ACATGT | 1 cut(s) | 1019 |
| PciSI | GCTCTTC | 2 cut(s) | 1452, 2244 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 910 |
| PfeI | GAWTC | 4 cut(s) | 427, 1231, 2207, 2255 |
| PflFI | GACNNNGTC | 1 cut(s) | 1129 |
| PleI | GAGTC | 2 cut(s) | 1931, 2433 |
| PluTI | GGCGCC | 1 cut(s) | 2752 |
| PmaCI | CACGTG | 1 cut(s) | 2159 |
| PmlI | CACGTG | 1 cut(s) | 2159 |
| PpsI | GAGTC | 2 cut(s) | 1931, 2433 |
| Ppu21I | YACGTR | 1 cut(s) | 2159 |
| PpuMI | RGGWCCY | 1 cut(s) | 1584 |
| PscI | ACATGT | 1 cut(s) | 1019 |
| Psp124BI | GAGCTC | 1 cut(s) | 1011 |
| Psp5II | RGGWCCY | 1 cut(s) | 1584 |
| Psp6I | CCWGG | 1 cut(s) | 281 |
| PspCI | CACGTG | 1 cut(s) | 2159 |
| PspEI | GGTNACC | 1 cut(s) | 1985 |
| PspFI | CCCAGC | 2 cut(s) | 163, 1580 |
| PspGI | CCWGG | 1 cut(s) | 281 |
| PspPPI | RGGWCCY | 1 cut(s) | 1584 |
| PspXI | VCTCGAGB | 1 cut(s) | 23 |
| PsuI | RGATCY | 2 cut(s) | 1685, 2777 |
| PsyI | GACNNNGTC | 1 cut(s) | 1129 |
| PvuII | CAGCTG | 1 cut(s) | 142 |
| RsaI | GTAC | 4 cut(s) | 225, 2221, 2556, 2615 |
| RsaNI | GTAC | 4 cut(s) | 224, 2220, 2555, 2614 |
| SacI | GAGCTC | 1 cut(s) | 1011 |
| SacII | CCGCGG | 1 cut(s) | 308 |
| SalI | GTCGAC | 2 cut(s) | 1015, 1543 |
| SapI | GCTCTTC | 2 cut(s) | 1452, 2244 |
| SaqAI | TTAA | 3 cut(s) | 87, 408, 1670 |
| ScaI | AGTACT | 1 cut(s) | 2556 |
| SchI | GAGTC | 2 cut(s) | 1931, 2434 |
| ScrFI | CCNGG | 2 cut(s) | 31, 283 |
| SduI | GDGCHC | 5 cut(s) | 176, 768, 830, 1011, 2338 |
| SfaNI | GCATC | 5 cut(s) | 91, 709, 1849, 2106, 2143 |
| SfcI | CTRYAG | 1 cut(s) | 688 |
| SfoI | GGCGCC | 1 cut(s) | 2750 |
| Sfr274I | CTCGAG | 2 cut(s) | 23, 1260 |
| Sfr303I | CCGCGG | 1 cut(s) | 308 |
| SfuI | TTCGAA | 1 cut(s) | 1613 |
| SgrBI | CCGCGG | 1 cut(s) | 308 |
| SinI | GGWCC | 5 cut(s) | 276, 506, 1482, 1584, 2386 |
| SlaI | CTCGAG | 2 cut(s) | 23, 1260 |
| SmlI | CTYRAG | 4 cut(s) | 23, 1181, 1260, 2471 |
| SmoI | CTYRAG | 4 cut(s) | 23, 1181, 1260, 2471 |
| SseBI | AGGCCT | 1 cut(s) | 874 |
| SspDI | GGCGCC | 1 cut(s) | 2748 |
| SspI | AATATT | 1 cut(s) | 543 |
| SstI | GAGCTC | 1 cut(s) | 1011 |
| StuI | AGGCCT | 1 cut(s) | 874 |
| StyD4I | CCNGG | 2 cut(s) | 29, 281 |
| StyI | CCWWGG | 6 cut(s) | 350, 883, 1069, 1202, 1629, 2133 |
| TaaI | ACNGT | 7 cut(s) | 914, 1291, 1643, 2368, 2479, 2487, 2512 |
| TaiI | ACGT | 5 cut(s) | 251, 1339, 1594, 1886, 2161 |
| TaqII | GACCGA | 2 cut(s) | 1777, 2531 |
| TatI | WGTACW | 2 cut(s) | 2219, 2554 |
| TauI | GCSGC | 7 cut(s) | 187, 208, 455, 539, 773, 1094, 2007 |
| TfiI | GAWTC | 4 cut(s) | 427, 1231, 2207, 2255 |
| Tru1I | TTAA | 3 cut(s) | 87, 408, 1670 |
| Tru9I | TTAA | 3 cut(s) | 87, 408, 1670 |
| TscAI | CASTG | 6 cut(s) | 183, 936, 1103, 1436, 2373, 2517 |
| TseFI | GTSAC | 5 cut(s) | 1789, 1913, 1985, 2512, 2739 |
| TseI | GCWGC | 3 cut(s) | 42, 722, 2707 |
| Tsp45I | GTSAC | 5 cut(s) | 1789, 1913, 1985, 2512, 2739 |
| TspDTI | ATGAA | 7 cut(s) | 230, 419, 959, 992, 1339, 1470, 1571 |
| TspGWI | ACGGA | 3 cut(s) | 118, 431, 1817 |
| TspRI | CASTG | 6 cut(s) | 183, 936, 1103, 1436, 2373, 2517 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1129 |
| VneI | GTGCAC | 2 cut(s) | 172, 826 |
| VpaK11BI | GGWCC | 5 cut(s) | 276, 506, 1482, 1584, 2386 |
| XapI | RAATTY | 7 cut(s) | 61, 124, 587, 836, 946, 1214, 1783 |
| XbaI | TCTAGA | 1 cut(s) | 2410 |
| XceI | RCATGY | 2 cut(s) | 713, 1023 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1997 |
| XhoI | CTCGAG | 2 cut(s) | 23, 1260 |
| XmiI | GTMKAC | 3 cut(s) | 1016, 1544, 1736 |
| ZrmI | AGTACT | 1 cut(s) | 2556 |