Rh4AG106700

dipeptidyl-peptidase activity

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
Physical Location & Seq
Reverse (-)
22939350 .. 22958162
18813 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG106700.1

Sequence Viewer

Length: 1317 bp
ATGACCAAGGAAGAGTTTGCCATATGTTATAGCCGAGACTATCCTTCTTGTCTTGCATTAAACATAATGAAACCATGGGAGAGGTCTTTGGACTTGTCAGTACTTCTACCTTGGGGGAGCATTCTCATTTCTCGAGACATAAACTATGGTCTCAAGGGTACACTGGGTCGGCCAGGGGTTGAGGTTTATCTTCCAAACTTTGTTGTGCGTCAGCTTGGCTTCATACAAAGTTGTCCAGCCTTCTTTCTGATGTCCCGGAATCGTTTTTCTTCATGGAGAGATGGGTTTACAGACACCGCGCATTGTTCCGCAGTCACTCTTTATTATCAGACTCAGTTTGGCAACTTTGAGAGATCCGGCCTAAGCGCCCGCAAACCTGATCATAGAGCAACTCCGACTTTCCAAACTTGGTGGTCAACATTTATCAAGAAGAAACTTGGAGAGGACTTGCGGACAACCGAGCGTATTGCCTTGTATGGATTCCCGGGCTTGTTCACCAACAAAGGCAATGGCAAGAAGAAGGCACCGGTTGCCAAGTCGAAATCCAAAGAAAAGTCCAAGGAAGAGCAAACCTCAAAGAAACGAGAATCAAAGTCGGGAAGAGCTCTGCCTACCAAGAAGGTAAAAAAGTCACCTGACGCGGTGGAGAGTTTGGTCACGAATCCGGCTGACATTATGGTTAGTGAAGACATAATTTTCGAGGGTGATATGGATAATAGCCAAAATGTTCTAGCTGAAAATCACATCATGTCTGGAGCTGAGGATGTGGCCGAAACTAGTAATGCCTCAAACAATAACACGGGCTCGGCCGACAGCGGAGGTTCGCCTGATGAAGCACAGTTAGAAAACTTTGAGCACGAGAGAGATGACCGCATTGATCACTCTTCGCATCCTCCTGAAAGCAACATGGTTGAAATTGACATGGATGACTTGGGTGAGAACCAGCTTCTTAATATCGACCAACCACTCGCAAACTCACATAACCTTGCTAAGGATTCGAAAGACATCGGCGTACTTGGCCGAGAGGCATTGCTTAACCACCAAACACTTGTCCCGGTACGAGGAACTCAAAGCAGTTCAACCTTGGAGTTGGTTCTTCTCAATCCAACTGAACCAAATCCTTCTATGTTCGGAATGCTTACCACCTCTCTTACTGAAGGGACGCCTCAAAATGATCAAGCTATCGTTTGTGCCCCATCGTCGACTGAGCCTGTGATGCTTAGCTTCAACCTTGCACAATTTTTTTTGAGAACCAGGCTTGTGAAATGCCTCAAAAATCTCTTTTGTGGTATTTCATCGAACAGCTTGCCCGCTTAG

Protein Analysis

438

Amino Acids

48.53

Weight (kDa)

5.85

Isoelectric Point (pI)

40.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000063)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21382 FvH4_1g29794 FvH4_1g29795 FvH4_2g35573 FvH4_2g35574 FvH4_4g18552 FvH4_5g16044
malus_domestica MD05G1017000.v1.1
prunus_persica Prupe.3G140800_v2.0.a1 Prupe.6G164100_v2.0.a1
pyrus_communis pycom01g04330 pycom03g19820 pycom04g06720 pycom06g11360 pycom06g19000 pycom10g08100 pycom13g16660 pycom13g27590 pycom13g27640 pycom13g27890 pycom16g11770 pycom16g19530
rosa_chinensis RchiOBHm_Chr1g0317341 RchiOBHm_Chr1g0317351 RchiOBHm_Chr1g0320431 RchiOBHm_Chr1g0320711 RchiOBHm_Chr1g0320721 RchiOBHm_Chr1g0321611 RchiOBHm_Chr1g0321621 RchiOBHm_Chr1g0321631 RchiOBHm_Chr1g0323651 RchiOBHm_Chr1g0332991 RchiOBHm_Chr1g0333001 RchiOBHm_Chr1g0335981 RchiOBHm_Chr1g0335991 RchiOBHm_Chr1g0336001 RchiOBHm_Chr1g0350201 RchiOBHm_Chr1g0368201 RchiOBHm_Chr2g0105531 RchiOBHm_Chr2g0105541 RchiOBHm_Chr2g0116571 RchiOBHm_Chr2g0116581 RchiOBHm_Chr2g0121071 RchiOBHm_Chr2g0131351 RchiOBHm_Chr2g0131661 RchiOBHm_Chr2g0133021 RchiOBHm_Chr2g0138181 RchiOBHm_Chr2g0138191 RchiOBHm_Chr2g0142701 RchiOBHm_Chr2g0142711 RchiOBHm_Chr2g0152981 RchiOBHm_Chr3g0456181 RchiOBHm_Chr3g0456191 RchiOBHm_Chr3g0493631 RchiOBHm_Chr3g0496201 RchiOBHm_Chr4g0401541 RchiOBHm_Chr4g0410311 RchiOBHm_Chr4g0410321 RchiOBHm_Chr4g0419231 RchiOBHm_Chr4g0419511 RchiOBHm_Chr4g0419521 RchiOBHm_Chr5g0004311 RchiOBHm_Chr5g0004321 RchiOBHm_Chr5g0038131 RchiOBHm_Chr5g0038251 RchiOBHm_Chr5g0038261 RchiOBHm_Chr5g0038271 RchiOBHm_Chr5g0052241 RchiOBHm_Chr5g0053911 RchiOBHm_Chr5g0074641 RchiOBHm_Chr5g0076651 RchiOBHm_Chr5g0076661 RchiOBHm_Chr6g0249161 RchiOBHm_Chr6g0249171 RchiOBHm_Chr6g0250961 RchiOBHm_Chr6g0253701 RchiOBHm_Chr6g0262131 RchiOBHm_Chr6g0263181 RchiOBHm_Chr6g0263231 RchiOBHm_Chr6g0263241 RchiOBHm_Chr6g0263251 RchiOBHm_Chr6g0291271 RchiOBHm_Chr7g0194611 RchiOBHm_Chr7g0219691 RchiOBHm_Chr7g0219701 RchiOBHm_Chr7g0225431 RchiOBHm_Chr7g0234221 RchiOBHm_Chr7g0238711 RchiOBHm_Chr7g0238721 RchiOBHm_Chr7g0238731 RchiOBHm_Chr7g0239611 RchiOBHm_Chr7g0239621
rosa_laevigata RLG00000001361 RLG00000001376 RLG00000001860 RLG00000002051 RLG00000002362 RLG00000008940 RLG00000012764 RLG00000018782 RLG00000029639 RLG00000030151
rosa_multiflora Rmu_co8090794.1_g000001 Rmu_co8135356.1_g000001 Rmu_co8224968.1_g000001 Rmu_sc0000016.1_g000020 Rmu_sc0000029.1_g000061 Rmu_sc0000035.1_g000032 Rmu_sc0000060.1_g000041 Rmu_sc0000148.1_g000041 Rmu_sc0000315.1_g000084 Rmu_sc0000527.1_g000005 Rmu_sc0000527.1_g000007 Rmu_sc0000527.1_g000008 Rmu_sc0000648.1_g000002 Rmu_sc0000762.1_g000076 Rmu_sc0000870.1_g000003 Rmu_sc0000870.1_g000004 Rmu_sc0000948.1_g000037 Rmu_sc0000997.1_g000003 Rmu_sc0001047.1_g000041 Rmu_sc0001047.1_g000042 Rmu_sc0001075.1_g000044 Rmu_sc0001174.1_g000006 Rmu_sc0001235.1_g000025 Rmu_sc0001292.1_g000008 Rmu_sc0001301.1_g000038 Rmu_sc0001461.1_g000069 Rmu_sc0001461.1_g000070 Rmu_sc0001669.1_g000041 Rmu_sc0001689.1_g000027 Rmu_sc0001896.1_g000008 Rmu_sc0001909.1_g000013 Rmu_sc0002170.1_g000038 Rmu_sc0002200.1_g000014 Rmu_sc0002283.1_g000027 Rmu_sc0002284.1_g000014 Rmu_sc0002294.1_g000017 Rmu_sc0002294.1_g000018 Rmu_sc0002307.1_g000020 Rmu_sc0002307.1_g000021 Rmu_sc0002307.1_g000023 Rmu_sc0002357.1_g000054 Rmu_sc0002409.1_g000005 Rmu_sc0002535.1_g000002 Rmu_sc0002589.1_g000014 Rmu_sc0002759.1_g000016 Rmu_sc0002759.1_g000017 Rmu_sc0002777.1_g000015 Rmu_sc0002824.1_g000016 Rmu_sc0002872.1_g000005 Rmu_sc0002872.1_g000012 Rmu_sc0002872.1_g000013 Rmu_sc0002942.1_g000019 Rmu_sc0003337.1_g000001 Rmu_sc0003410.1_g000052 Rmu_sc0003445.1_g000010 Rmu_sc0003773.1_g000007 Rmu_sc0003773.1_g000008 Rmu_sc0003895.1_g000002 Rmu_sc0004063.1_g000006 Rmu_sc0004088.1_g000009 Rmu_sc0004088.1_g000010 Rmu_sc0004174.1_g000027 Rmu_sc0004196.1_g000010 Rmu_sc0004515.1_g000006 Rmu_sc0004727.1_g000010 Rmu_sc0004755.1_g000018 Rmu_sc0005016.1_g000030 Rmu_sc0005026.1_g000001 Rmu_sc0005044.1_g000007 Rmu_sc0005284.1_g000001 Rmu_sc0005431.1_g000030 Rmu_sc0005802.1_g000014 Rmu_sc0005802.1_g000015 Rmu_sc0005994.1_g000004 Rmu_sc0005994.1_g000005 Rmu_sc0006059.1_g000048 Rmu_sc0006583.1_g000013 Rmu_sc0006824.1_g000009 Rmu_sc0007458.1_g000005 Rmu_sc0007707.1_g000002 Rmu_sc0008242.1_g000012 Rmu_sc0008713.1_g000006 Rmu_sc0008770.1_g000008 Rmu_sc0009785.1_g000004 Rmu_sc0009785.1_g000005 Rmu_sc0010125.1_g000001 Rmu_sc0010211.1_g000004 Rmu_sc0011034.1_g000001 Rmu_sc0011833.1_g000006 Rmu_sc0014851.1_g000001 Rmu_sc0014899.1_g000001 Rmu_sc0015060.1_g000003 Rmu_sc0015186.1_g000001 Rmu_sc0015248.1_g000003 Rmu_sc0015248.1_g000004 Rmu_sc0015314.1_g000001 Rmu_sc0018098.1_g000002 Rmu_sc0022706.1_g000004 Rmu_sc0023350.1_g000002 Rmu_sc0027636.1_g000001 Rmu_sc0027672.1_g000003 Rmu_sc0030879.1_g000001 Rmu_ssc0000008.1_g000029 Rmu_ssc0000019.1_g000014 Rmu_ssc0000050.1_g000082 Rmu_ssc0000282.1_g000004 Rmu_ssc0000311.1_g000010
rosa_roxburghii Rroxscaffold_1G00015190 Rroxscaffold_1G00031880 Rroxscaffold_1G00031890 Rroxscaffold_1G00059310 Rroxscaffold_1G00060420 Rroxscaffold_1G00067930 Rroxscaffold_1G00075030 Rroxscaffold_2G00082210 Rroxscaffold_2G00122970 Rroxscaffold_3G00218230 Rroxscaffold_3G00219020 Rroxscaffold_3G00219030 Rroxscaffold_3G00223680 Rroxscaffold_3G00223690 Rroxscaffold_3G00223700 Rroxscaffold_3G00226870 Rroxscaffold_3G00226880 Rroxscaffold_3G00232990 Rroxscaffold_3G00265610 Rroxscaffold_3G00265620 Rroxscaffold_3G00265630 Rroxscaffold_4G00318660 Rroxscaffold_4G00319060 Rroxscaffold_4G00323500 Rroxscaffold_5G00357520 Rroxscaffold_5G00366150 Rroxscaffold_5G00377470 Rroxscaffold_6G00395700 Rroxscaffold_6G00413950 Rroxscaffold_7G00187650 Rroxscaffold_7G00198290 Rroxscaffold_7G00198300 Rroxscaffold_7G00208060
rosa_rugosa Rorug01G0173900 Rorug01G0174000 Rorug01G0174100 Rorug01G0174100 Rorug02G0341200 Rorug04G0135700 Rorug04G0135800 Rorug05G0032500 Rorug06G0021800
rosa_samantha Rh1AG036600 Rh1AG245800 Rh1CG021700 Rh1CG021800 Rh1CG085800 Rh1CG085900 Rh1CG187900 Rh1CG229600 Rh1CG239600 Rh1CG246500 Rh1CG246600 Rh2BG478100 Rh2DG341300 Rh2DG366600 Rh2DG375700 Rh2DG384300 Rh2DG487000 Rh2DG504000 Rh2DG504100 Rh3AG311800 Rh3AG327500 Rh3AG328300 Rh3BG345100 Rh3CG320100 Rh4AG005700 Rh4AG067900 Rh4AG068000 Rh4AG084400 Rh4AG106700 Rh4AG160000 Rh4AG173900 Rh4AG174000 Rh4CG125300 Rh4CG125500 Rh4CG264500 Rh4DG110800 Rh5AG047300 Rh5AG085200 Rh5AG126300 Rh5AG127300 Rh5AG203000 Rh5AG332400 Rh5AG332500 Rh5AG342400 Rh5AG344100 Rh5AG375600 Rh5AG378300 Rh5AG386000 Rh5AG529600 Rh5BG125200 Rh5CG137600 Rh5CG137700 Rh5DG125200 Rh6BG134100 Rh6BG175400 Rh6BG179500 Rh6BG179600 Rh6BG181600 Rh6BG181700 Rh6BG191100 Rh6BG232900 Rh6BG259700 Rh6BG259800 Rh7AG028000 Rh7AG319400 Rh7AG352700 Rh7AG352800 Rh7AG352900 Rh7AG482500 Rh7AG482600 Rh7AG503800 Rh7BG334700 Rh7CG200100 Rh7CG336200 Rh7CG370200 Rh7CG370400 Rh7CG370500
rosa_wichuraiana Rw1G001580 Rw1G003570 Rw1G004260 Rw1G004270 Rw1G021170 Rw2G019390 Rw2G040280 Rw2G044050 Rw4G004430 Rw5G010950 Rw5G018350 Rw5G032890 Rw6G002840 Rw6G006510 Rw6G007780 Rw6G033790 Rw7G036320 Rw7G040550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 523
AccI GTMKAC 1 cut(s) 1202
AccII CGCG 2 cut(s) 299, 641
AciI CCGC 8 cut(s) 297, 309, 370, 451, 641, 816, 871, 1311
AclWI GGATC 1 cut(s) 348
AcoI YGGCCR 4 cut(s) 170, 768, 807, 1018
AcuI CTGAAG 1 cut(s) 1176
AcyI GRCGYC 1 cut(s) 1163
AfaI GTAC 4 cut(s) 102, 160, 1014, 1059
AfiI CCNNNNNNNGG 2 cut(s) 991, 1061
AgeI ACCGGT 1 cut(s) 526
AgsI TTSAA 3 cut(s) 914, 1080, 1228
AhlI ACTAGT 1 cut(s) 776
AjnI CCWGG 2 cut(s) 172, 1253
AluBI AGCT 8 cut(s) 214, 605, 734, 758, 946, 1181, 1224, 1305
AluI AGCT 8 cut(s) 214, 605, 734, 758, 946, 1181, 1224, 1305
Alw21I GWGCWC 2 cut(s) 607, 858
Alw26I GTCTC 3 cut(s) 30, 129, 155
AlwI GGATC 1 cut(s) 348
Ama87I CYCGRG 2 cut(s) 132, 484
AoxI GGCC 5 cut(s) 170, 358, 768, 807, 1018
ArsI GACNNNNNNTTYG 2 cut(s) 680, 712
AsiGI ACCGGT 1 cut(s) 526
AspLEI GCGC 2 cut(s) 301, 368
AsuC2I CCSGG 4 cut(s) 256, 485, 486, 1055
AsuHPI GGTGA 4 cut(s) 487, 624, 716, 947
AsuII TTCGAA 1 cut(s) 998
AvaI CYCGRG 2 cut(s) 132, 484
BaeGI GKGCMC 1 cut(s) 1195
BanI GGYRCC 1 cut(s) 523
BanII GRGCYC 2 cut(s) 607, 806
BauI CACGAG 1 cut(s) 857
BbsI GAAGAC 1 cut(s) 693
Bbv12I GWGCWC 2 cut(s) 607, 858
BbvCI CCTCAGC 1 cut(s) 759
BccI CCATC 2 cut(s) 275, 1204
BcgI CGANNNNNNTGC 3 cut(s) 449, 483, 1288
BciT130I CCWGG 2 cut(s) 174, 1255
BclI TGATCA 3 cut(s) 379, 877, 1174
BcnI CCSGG 4 cut(s) 256, 485, 486, 1055
BcoDI GTCTC 3 cut(s) 30, 129, 155
BcuI ACTAGT 1 cut(s) 776
BfaI CTAG 2 cut(s) 731, 777
BfoI RGCGCY 1 cut(s) 369
BlpI GCTNAGC 1 cut(s) 1220
BmcAI AGTACT 1 cut(s) 102
Bme1390I CCNGG 6 cut(s) 174, 256, 485, 486, 1055, 1255
BmeT110I CYCGRG 2 cut(s) 132, 484
BmiI GGNNCC 1 cut(s) 525
BmrFI CCNGG 6 cut(s) 174, 256, 485, 486, 1055, 1255
BmrI ACTGGG 1 cut(s) 173
BmsI GCATC 2 cut(s) 898, 1206
BmuI ACTGGG 1 cut(s) 173
BpiI GAAGAC 1 cut(s) 693
BplI GAGNNNNNCTC 2 cut(s) 557, 589
BpmI CTGGAG 1 cut(s) 774
Bpu10I CCTNAGC 3 cut(s) 362, 759, 990
Bpu1102I GCTNAGC 1 cut(s) 1220
Bpu14I TTCGAA 1 cut(s) 998
BpuEI CTTGAG 1 cut(s) 137
BpuMI CCSGG 4 cut(s) 256, 485, 486, 1055
BsaHI GRCGYC 1 cut(s) 1163
BsaI GGTCTC 1 cut(s) 155
BsaJI CCNNGG 7 cut(s) 6, 74, 110, 173, 484, 558, 1083
BsaWI WCCGGW 1 cut(s) 526
Bsc4I CCNNNNNNNGG 2 cut(s) 991, 1061
Bse118I RCCGGY 1 cut(s) 526
Bse1I ACTGG 1 cut(s) 168
Bse3DI GCAATG 2 cut(s) 514, 1028
BseBI CCWGG 2 cut(s) 174, 1255
BseDI CCNNGG 7 cut(s) 6, 74, 110, 173, 484, 558, 1083
BseGI GGATG 3 cut(s) 769, 889, 931
BseLI CCNNNNNNNGG 2 cut(s) 991, 1061
BseMI GCAATG 2 cut(s) 514, 1028
BseMII CTCAG 3 cut(s) 347, 750, 1197
BseNI ACTGG 1 cut(s) 168
BseSI GKGCMC 1 cut(s) 1195
BseX3I CGGCCG 1 cut(s) 807
Bsh1236I CGCG 2 cut(s) 299, 641
Bsh1285I CGRYCG 1 cut(s) 810
BshFI GGCC 5 cut(s) 172, 360, 770, 809, 1020
BshNI GGYRCC 1 cut(s) 523
BshTI ACCGGT 1 cut(s) 526
BsiEI CGRYCG 1 cut(s) 810
BsiHKAI GWGCWC 2 cut(s) 607, 858
BsiHKCI CYCGRG 2 cut(s) 132, 484
BsiSI CCGG 6 cut(s) 256, 357, 485, 527, 665, 1055
BslFI GGGAC 3 cut(s) 238, 1037, 1174
BslI CCNNNNNNNGG 2 cut(s) 991, 1061
BsmAI GTCTC 3 cut(s) 30, 129, 155
BsmFI GGGAC 3 cut(s) 238, 1037, 1174
BsmI GAATGC 2 cut(s) 120, 1140
BsnI GGCC 5 cut(s) 172, 360, 770, 809, 1020
Bso31I GGTCTC 1 cut(s) 155
BsoBI CYCGRG 2 cut(s) 132, 484
Bsp119I TTCGAA 1 cut(s) 998
Bsp1286I GDGCHC 4 cut(s) 607, 806, 858, 1195
Bsp143I GATC 4 cut(s) 353, 379, 877, 1174
Bsp1720I GCTNAGC 1 cut(s) 1220
Bsp19I CCATGG 1 cut(s) 74
BspACI CCGC 8 cut(s) 297, 309, 370, 451, 641, 816, 871, 1311
BspANI GGCC 5 cut(s) 172, 360, 770, 809, 1020
BspCNI CTCAG 3 cut(s) 346, 751, 1198
BspFNI CGCG 2 cut(s) 299, 641
BspLI GGNNCC 1 cut(s) 525
BspPI GGATC 1 cut(s) 348
BspQI GCTCTTC 2 cut(s) 558, 595
BspT104I TTCGAA 1 cut(s) 998
BspT107I GGYRCC 1 cut(s) 523
BspTNI GGTCTC 1 cut(s) 155
BsrDI GCAATG 2 cut(s) 514, 1028
BsrFI RCCGGY 1 cut(s) 526
BsrI ACTGG 1 cut(s) 168
BssAI RCCGGY 1 cut(s) 526
BssECI CCNNGG 7 cut(s) 6, 74, 110, 173, 484, 558, 1083
BssMI GATC 4 cut(s) 353, 379, 877, 1174
BssNI GRCGYC 1 cut(s) 1163
BssSI CACGAG 1 cut(s) 857
BssT1I CCWWGG 5 cut(s) 6, 74, 110, 558, 1083
Bst2BI CACGAG 1 cut(s) 857
Bst2UI CCWGG 2 cut(s) 174, 1255
Bst4CI ACNGT 1 cut(s) 840
Bst6I CTCTTC 4 cut(s) 6, 558, 595, 889
BstACI GRCGYC 1 cut(s) 1163
BstAPI GCANNNNNTGC 1 cut(s) 530
BstBI TTCGAA 1 cut(s) 998
BstC8I GCNNGC 3 cut(s) 370, 1307, 1311
BstDEI CTNAG 7 cut(s) 333, 362, 759, 990, 1206, 1220, 1314
BstDSI CCRYGG 1 cut(s) 74
BstENI CCTNNNNNAGG 1 cut(s) 989
BstF5I GGATG 3 cut(s) 769, 889, 931
BstFNI CGCG 2 cut(s) 299, 641
BstH2I RGCGCY 1 cut(s) 369
BstHHI GCGC 2 cut(s) 301, 368
BstKTI GATC 4 cut(s) 356, 382, 880, 1177
BstMAI GTCTC 3 cut(s) 30, 129, 155
BstMBI GATC 4 cut(s) 353, 379, 877, 1174
BstMCI CGRYCG 1 cut(s) 810
BstMWI GCNNNNNNNGC 3 cut(s) 530, 1017, 1216
BstNI CCWGG 2 cut(s) 174, 1255
BstSCI CCNGG 6 cut(s) 172, 254, 483, 484, 1053, 1253
BstSLI GKGCMC 1 cut(s) 1195
BstUI CGCG 2 cut(s) 299, 641
BstV2I GAAGAC 1 cut(s) 693
BstX2I RGATCY 1 cut(s) 353
BstYI RGATCY 1 cut(s) 353
BstZI CGGCCG 1 cut(s) 807
BsuRI GGCC 5 cut(s) 172, 360, 770, 809, 1020
BtgI CCRYGG 1 cut(s) 74
BtsCI GGATG 3 cut(s) 769, 889, 931
BtsIMutI CAGTG 1 cut(s) 161
Cac8I GCNNGC 3 cut(s) 370, 1307, 1311
CfoI GCGC 2 cut(s) 301, 368
Cfr10I RCCGGY 1 cut(s) 526
Cfr9I CCCGGG 1 cut(s) 484
CseI GACGC 3 cut(s) 197, 647, 1171
Csp6I GTAC 4 cut(s) 101, 159, 1013, 1058
CspAI ACCGGT 1 cut(s) 526
CspCI CAANNNNNGTGG 2 cut(s) 392, 427
CviAII CATG 5 cut(s) 75, 273, 748, 907, 922
CviQI GTAC 4 cut(s) 101, 159, 1013, 1058
DdeI CTNAG 7 cut(s) 333, 362, 759, 990, 1206, 1220, 1314
DpnI GATC 4 cut(s) 355, 381, 879, 1176
DpnII GATC 4 cut(s) 353, 379, 877, 1174
EaeI YGGCCR 4 cut(s) 170, 768, 807, 1018
EagI CGGCCG 1 cut(s) 807
Eam1104I CTCTTC 4 cut(s) 6, 558, 595, 889
EarI CTCTTC 4 cut(s) 6, 558, 595, 889
Ecl136II GAGCTC 1 cut(s) 605
EclXI CGGCCG 1 cut(s) 807
Eco130I CCWWGG 5 cut(s) 6, 74, 110, 558, 1083
Eco24I GRGCYC 2 cut(s) 607, 806
Eco31I GGTCTC 1 cut(s) 155
Eco52I CGGCCG 1 cut(s) 807
Eco53kI GAGCTC 1 cut(s) 605
Eco57I CTGAAG 1 cut(s) 1176
Eco88I CYCGRG 2 cut(s) 132, 484
EcoICRI GAGCTC 1 cut(s) 605
EcoNI CCTNNNNNAGG 1 cut(s) 989
EcoRII CCWGG 2 cut(s) 172, 1253
EcoT14I CCWWGG 5 cut(s) 6, 74, 110, 558, 1083
EcoT38I GRGCYC 2 cut(s) 607, 806
ErhI CCWWGG 5 cut(s) 6, 74, 110, 558, 1083
FaeI CATG 5 cut(s) 78, 276, 751, 910, 925
FaqI GGGAC 3 cut(s) 238, 1037, 1174
FatI CATG 5 cut(s) 74, 272, 747, 906, 921
FauI CCCGC 1 cut(s) 377
FauNDI CATATG 1 cut(s) 23
FbaI TGATCA 3 cut(s) 379, 877, 1174
FblI GTMKAC 1 cut(s) 1202
FokI GGATG 3 cut(s) 776, 876, 938
FriOI GRGCYC 2 cut(s) 607, 806
FspBI CTAG 2 cut(s) 731, 777
GlaI GCGC 2 cut(s) 300, 367
GsuI CTGGAG 1 cut(s) 774
HaeII RGCGCY 1 cut(s) 369
HaeIII GGCC 5 cut(s) 172, 360, 770, 809, 1020
HapII CCGG 6 cut(s) 256, 357, 485, 527, 665, 1055
HgaI GACGC 3 cut(s) 197, 647, 1171
HhaI GCGC 2 cut(s) 301, 368
Hin1I GRCGYC 1 cut(s) 1163
Hin1II CATG 5 cut(s) 78, 276, 751, 910, 925
Hin6I GCGC 2 cut(s) 299, 366
HinP1I GCGC 2 cut(s) 299, 366
HincII GTYRAC 2 cut(s) 417, 1203
HindII GTYRAC 2 cut(s) 417, 1203
HinfI GANTC 6 cut(s) 259, 331, 480, 587, 661, 995
HpaII CCGG 6 cut(s) 256, 357, 485, 527, 665, 1055
HphI GGTGA 4 cut(s) 487, 624, 716, 947
Hpy166II GTNNAC 5 cut(s) 161, 288, 417, 495, 1203
Hpy188I TCNGA 4 cut(s) 249, 330, 396, 1133
Hpy188III TCNNGA 7 cut(s) 132, 134, 427, 597, 658, 753, 896
Hpy8I GTNNAC 5 cut(s) 161, 288, 417, 495, 1203
Hpy99I CGWCG 1 cut(s) 1204
HpyAV CCTTC 6 cut(s) 54, 250, 514, 613, 1131, 1151
HpyCH4III ACNGT 1 cut(s) 840
HpyCH4V TGCA 2 cut(s) 56, 1235
HpyF10VI GCNNNNNNNGC 3 cut(s) 530, 1017, 1216
HpyF3I CTNAG 7 cut(s) 333, 362, 759, 990, 1206, 1220, 1314
Hsp92I GRCGYC 1 cut(s) 1163
Hsp92II CATG 5 cut(s) 78, 276, 751, 910, 925
HspAI GCGC 2 cut(s) 299, 366
Ksp22I TGATCA 3 cut(s) 379, 877, 1174
Kzo9I GATC 4 cut(s) 353, 379, 877, 1174
LguI GCTCTTC 2 cut(s) 558, 595
LmnI GCTCC 2 cut(s) 117, 755
LweI GCATC 2 cut(s) 898, 1206
MaeI CTAG 2 cut(s) 731, 777
MaeIII GTNAC 3 cut(s) 313, 630, 655
MalI GATC 4 cut(s) 355, 381, 879, 1176
MboI GATC 4 cut(s) 353, 379, 877, 1174
MflI RGATCY 1 cut(s) 353
MhlI GDGCHC 4 cut(s) 607, 806, 858, 1195
MluCI AATT 3 cut(s) 693, 915, 1238
MlyI GAGTC 1 cut(s) 325
MmeI TCCRAC 2 cut(s) 419, 1130
MseI TTAA 3 cut(s) 59, 951, 1035
MspA1I CMGCKG 1 cut(s) 816
MspI CCGG 6 cut(s) 256, 357, 485, 527, 665, 1055
MspR9I CCNGG 6 cut(s) 174, 256, 485, 486, 1055, 1255
Mva1269I GAATGC 2 cut(s) 120, 1140
MvaI CCWGG 2 cut(s) 174, 1255
MvnI CGCG 2 cut(s) 299, 641
MwoI GCNNNNNNNGC 3 cut(s) 530, 1017, 1216
NciI CCSGG 4 cut(s) 256, 485, 486, 1055
NcoI CCATGG 1 cut(s) 74
NdeI CATATG 1 cut(s) 23
NdeII GATC 4 cut(s) 353, 379, 877, 1174
NlaIII CATG 5 cut(s) 78, 276, 751, 910, 925
NlaIV GGNNCC 1 cut(s) 525
NmeAIII GCCGAG 3 cut(s) 59, 785, 1046
NmuCI GTSAC 3 cut(s) 313, 630, 655
NspV TTCGAA 1 cut(s) 998
PaeR7I CTCGAG 1 cut(s) 132
PciSI GCTCTTC 2 cut(s) 558, 595
PctI GAATGC 2 cut(s) 120, 1140
PfeI GAWTC 5 cut(s) 259, 480, 587, 661, 995
PfoI TCCNGGA 1 cut(s) 254
PinAI ACCGGT 1 cut(s) 526
PleI GAGTC 1 cut(s) 325
PpsI GAGTC 1 cut(s) 325
Psp124BI GAGCTC 1 cut(s) 607
Psp6I CCWGG 2 cut(s) 172, 1253
PspGI CCWGG 2 cut(s) 172, 1253
PspN4I GGNNCC 1 cut(s) 525
PsuI RGATCY 1 cut(s) 353
RsaI GTAC 4 cut(s) 102, 160, 1014, 1059
RsaNI GTAC 4 cut(s) 101, 159, 1013, 1058
SacI GAGCTC 1 cut(s) 607
SalI GTCGAC 1 cut(s) 1201
SapI GCTCTTC 2 cut(s) 558, 595
SaqAI TTAA 3 cut(s) 59, 951, 1035
Sau3AI GATC 4 cut(s) 353, 379, 877, 1174
ScaI AGTACT 1 cut(s) 102
SchI GAGTC 1 cut(s) 325
ScrFI CCNGG 6 cut(s) 174, 256, 485, 486, 1055, 1255
SduI GDGCHC 4 cut(s) 607, 806, 858, 1195
SfaNI GCATC 2 cut(s) 898, 1206
Sfr274I CTCGAG 1 cut(s) 132
SfuI TTCGAA 1 cut(s) 998
SlaI CTCGAG 1 cut(s) 132
SmaI CCCGGG 1 cut(s) 486
SmlI CTYRAG 2 cut(s) 132, 152
SmoI CTYRAG 2 cut(s) 132, 152
SpeI ACTAGT 1 cut(s) 776
Sse9I AATT 3 cut(s) 693, 915, 1238
SsiI CCGC 8 cut(s) 297, 309, 370, 451, 641, 816, 871, 1311
SspMI CTAG 2 cut(s) 731, 777
SstI GAGCTC 1 cut(s) 607
StyD4I CCNGG 6 cut(s) 172, 254, 483, 484, 1053, 1253
StyI CCWWGG 5 cut(s) 6, 74, 110, 558, 1083
TaaI ACNGT 1 cut(s) 840
TaqI TCGA 7 cut(s) 133, 539, 699, 957, 998, 1202, 1298
TasI AATT 3 cut(s) 693, 915, 1238
TatI WGTACW 1 cut(s) 100
TfiI GAWTC 5 cut(s) 259, 480, 587, 661, 995
Tru1I TTAA 3 cut(s) 59, 951, 1035
Tru9I TTAA 3 cut(s) 59, 951, 1035
TscAI CASTG 1 cut(s) 168
TseFI GTSAC 3 cut(s) 313, 630, 655
Tsp45I GTSAC 3 cut(s) 313, 630, 655
TspDTI ATGAA 5 cut(s) 83, 211, 261, 846, 1284
TspMI CCCGGG 1 cut(s) 484
TspRI CASTG 1 cut(s) 168
XagI CCTNNNNNAGG 1 cut(s) 989
XhoI CTCGAG 1 cut(s) 132
XmaI CCCGGG 1 cut(s) 484
XmiI GTMKAC 1 cut(s) 1202
XspI CTAG 2 cut(s) 731, 777
ZrmI AGTACT 1 cut(s) 102
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.