Cyclic nucleotide-gated ion channel 1-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PMD | PF10536 | 47 - 235 | 2.9e-13 | Plant mobile domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 2 cut(s) | 673, 763 |
| AciI | CCGC | 4 cut(s) | 110, 191, 391, 761 |
| AcoI | YGGCCR | 2 cut(s) | 388, 635 |
| AfaI | GTAC | 4 cut(s) | 256, 330, 625, 757 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 11, 325 |
| AflIII | ACRYGT | 1 cut(s) | 140 |
| AgsI | TTSAA | 1 cut(s) | 456 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 652, 684 |
| AluBI | AGCT | 1 cut(s) | 204 |
| AluI | AGCT | 1 cut(s) | 204 |
| Alw21I | GWGCWC | 1 cut(s) | 107 |
| Alw26I | GTCTC | 3 cut(s) | 495, 594, 620 |
| Ama87I | CYCGRG | 1 cut(s) | 597 |
| AoxI | GGCC | 5 cut(s) | 195, 302, 388, 635, 702 |
| AspLEI | GCGC | 1 cut(s) | 765 |
| AspS9I | GGNCC | 3 cut(s) | 196, 227, 302 |
| AsuC2I | CCSGG | 2 cut(s) | 320, 639 |
| AvaI | CYCGRG | 1 cut(s) | 597 |
| AvaII | GGWCC | 1 cut(s) | 227 |
| Bbv12I | GWGCWC | 1 cut(s) | 107 |
| BceAI | ACGGC | 2 cut(s) | 378, 759 |
| BcgI | CGANNNNNNTGC | 1 cut(s) | 34 |
| BcnI | CCSGG | 2 cut(s) | 320, 639 |
| BcoDI | GTCTC | 3 cut(s) | 495, 594, 620 |
| BisI | GCNGC | 2 cut(s) | 110, 391 |
| BlsI | GCNGC | 2 cut(s) | 111, 392 |
| Bme1390I | CCNGG | 2 cut(s) | 320, 639 |
| Bme18I | GGWCC | 1 cut(s) | 227 |
| BmeT110I | CYCGRG | 1 cut(s) | 597 |
| BmgT120I | GGNCC | 3 cut(s) | 196, 227, 302 |
| BmrFI | CCNGG | 2 cut(s) | 320, 639 |
| Bpu10I | CCTNAGC | 2 cut(s) | 200, 205 |
| BpuEI | CTTGAG | 1 cut(s) | 602 |
| BpuMI | CCSGG | 2 cut(s) | 320, 639 |
| BsaAI | YACGTR | 2 cut(s) | 141, 755 |
| BsaI | GGTCTC | 1 cut(s) | 620 |
| BsaJI | CCNNGG | 7 cut(s) | 59, 71, 223, 471, 539, 575, 638 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 11, 325 |
| Bse1I | ACTGG | 1 cut(s) | 294 |
| BseDI | CCNNGG | 7 cut(s) | 59, 71, 223, 471, 539, 575, 638 |
| BseGI | GGATG | 4 cut(s) | 69, 298, 318, 361 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 11, 325 |
| BseNI | ACTGG | 1 cut(s) | 294 |
| BseRI | GAGGAG | 1 cut(s) | 109 |
| BseX3I | CGGCCG | 1 cut(s) | 635 |
| Bsh1236I | CGCG | 2 cut(s) | 673, 763 |
| Bsh1285I | CGRYCG | 1 cut(s) | 638 |
| BshFI | GGCC | 5 cut(s) | 197, 304, 390, 637, 704 |
| BsiEI | CGRYCG | 1 cut(s) | 638 |
| BsiHKAI | GWGCWC | 1 cut(s) | 107 |
| BsiHKCI | CYCGRG | 1 cut(s) | 597 |
| BsiSI | CCGG | 3 cut(s) | 319, 638, 701 |
| BslFI | GGGAC | 2 cut(s) | 579, 703 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 11, 325 |
| BsmAI | GTCTC | 3 cut(s) | 495, 594, 620 |
| BsmFI | GGGAC | 2 cut(s) | 579, 703 |
| BsmI | GAATGC | 2 cut(s) | 440, 585 |
| BsnI | GGCC | 5 cut(s) | 197, 304, 390, 637, 704 |
| Bso31I | GGTCTC | 1 cut(s) | 620 |
| BsoBI | CYCGRG | 1 cut(s) | 597 |
| Bsp1286I | GDGCHC | 1 cut(s) | 107 |
| Bsp19I | CCATGG | 1 cut(s) | 539 |
| BspACI | CCGC | 4 cut(s) | 110, 191, 391, 761 |
| BspANI | GGCC | 5 cut(s) | 197, 304, 390, 637, 704 |
| BspFNI | CGCG | 2 cut(s) | 673, 763 |
| BspTNI | GGTCTC | 1 cut(s) | 620 |
| BsrI | ACTGG | 1 cut(s) | 294 |
| BssECI | CCNNGG | 7 cut(s) | 59, 71, 223, 471, 539, 575, 638 |
| BssT1I | CCWWGG | 4 cut(s) | 223, 471, 539, 575 |
| Bst4CI | ACNGT | 3 cut(s) | 75, 254, 379 |
| Bst6I | CTCTTC | 1 cut(s) | 471 |
| BstBAI | YACGTR | 2 cut(s) | 141, 755 |
| BstC8I | GCNNGC | 1 cut(s) | 107 |
| BstDEI | CTNAG | 3 cut(s) | 200, 205, 407 |
| BstDSI | CCRYGG | 2 cut(s) | 71, 539 |
| BstF5I | GGATG | 4 cut(s) | 69, 298, 318, 361 |
| BstFNI | CGCG | 2 cut(s) | 673, 763 |
| BstHHI | GCGC | 1 cut(s) | 765 |
| BstMAI | GTCTC | 3 cut(s) | 495, 594, 620 |
| BstMCI | CGRYCG | 1 cut(s) | 638 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 49, 102, 771 |
| BstNSI | RCATGY | 1 cut(s) | 52 |
| BstSCI | CCNGG | 2 cut(s) | 318, 637 |
| BstSNI | TACGTA | 1 cut(s) | 755 |
| BstUI | CGCG | 2 cut(s) | 673, 763 |
| BstZI | CGGCCG | 1 cut(s) | 635 |
| BsuRI | GGCC | 5 cut(s) | 197, 304, 390, 637, 704 |
| BtgI | CCRYGG | 2 cut(s) | 71, 539 |
| BtsCI | GGATG | 4 cut(s) | 69, 298, 318, 361 |
| BtsIMutI | CAGTG | 1 cut(s) | 287 |
| Cac8I | GCNNGC | 1 cut(s) | 107 |
| CfoI | GCGC | 1 cut(s) | 765 |
| Cfr13I | GGNCC | 3 cut(s) | 196, 227, 302 |
| CseI | GACGC | 1 cut(s) | 662 |
| Csp6I | GTAC | 4 cut(s) | 255, 329, 624, 756 |
| CviAII | CATG | 6 cut(s) | 49, 100, 416, 466, 540, 737 |
| CviQI | GTAC | 4 cut(s) | 255, 329, 624, 756 |
| DdeI | CTNAG | 3 cut(s) | 200, 205, 407 |
| EaeI | YGGCCR | 2 cut(s) | 388, 635 |
| EagI | CGGCCG | 1 cut(s) | 635 |
| Eam1104I | CTCTTC | 1 cut(s) | 471 |
| EarI | CTCTTC | 1 cut(s) | 471 |
| EclXI | CGGCCG | 1 cut(s) | 635 |
| Eco105I | TACGTA | 1 cut(s) | 755 |
| Eco130I | CCWWGG | 4 cut(s) | 223, 471, 539, 575 |
| Eco31I | GGTCTC | 1 cut(s) | 620 |
| Eco47I | GGWCC | 1 cut(s) | 227 |
| Eco52I | CGGCCG | 1 cut(s) | 635 |
| Eco88I | CYCGRG | 1 cut(s) | 597 |
| EcoO109I | RGGNCCY | 1 cut(s) | 196 |
| EcoT14I | CCWWGG | 4 cut(s) | 223, 471, 539, 575 |
| ErhI | CCWWGG | 4 cut(s) | 223, 471, 539, 575 |
| FaeI | CATG | 6 cut(s) | 52, 103, 419, 469, 543, 740 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 349, 381 |
| FaqI | GGGAC | 2 cut(s) | 579, 703 |
| FatI | CATG | 6 cut(s) | 48, 99, 415, 465, 539, 736 |
| FauNDI | CATATG | 1 cut(s) | 488 |
| Fnu4HI | GCNGC | 2 cut(s) | 110, 391 |
| FokI | GGATG | 4 cut(s) | 76, 305, 325, 348 |
| Fsp4HI | GCNGC | 2 cut(s) | 110, 391 |
| GlaI | GCGC | 1 cut(s) | 764 |
| GluI | GCNGC | 2 cut(s) | 110, 391 |
| HaeIII | GGCC | 5 cut(s) | 197, 304, 390, 637, 704 |
| HapII | CCGG | 3 cut(s) | 319, 638, 701 |
| HgaI | GACGC | 1 cut(s) | 662 |
| HhaI | GCGC | 1 cut(s) | 765 |
| Hin1II | CATG | 6 cut(s) | 52, 103, 419, 469, 543, 740 |
| Hin6I | GCGC | 1 cut(s) | 763 |
| HinP1I | GCGC | 1 cut(s) | 763 |
| HinfI | GANTC | 4 cut(s) | 371, 382, 723, 794 |
| HpaII | CCGG | 3 cut(s) | 319, 638, 701 |
| Hpy166II | GTNNAC | 4 cut(s) | 71, 212, 752, 758 |
| Hpy188I | TCNGA | 2 cut(s) | 591, 793 |
| Hpy188III | TCNNGA | 5 cut(s) | 500, 564, 597, 599, 720 |
| Hpy8I | GTNNAC | 4 cut(s) | 71, 212, 752, 758 |
| Hpy99I | CGWCG | 2 cut(s) | 348, 678 |
| HpyAV | CCTTC | 2 cut(s) | 519, 715 |
| HpyCH4III | ACNGT | 3 cut(s) | 75, 254, 379 |
| HpyCH4IV | ACGT | 2 cut(s) | 140, 754 |
| HpyCH4V | TGCA | 5 cut(s) | 52, 134, 149, 419, 521 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 49, 102, 771 |
| HpyF3I | CTNAG | 3 cut(s) | 200, 205, 407 |
| HpySE526I | ACGT | 2 cut(s) | 140, 754 |
| Hsp92II | CATG | 6 cut(s) | 52, 103, 419, 469, 543, 740 |
| HspAI | GCGC | 1 cut(s) | 763 |
| LmnI | GCTCC | 1 cut(s) | 582 |
| LpnPI | CCDG | 4 cut(s) | 275, 332, 651, 714 |
| MaeII | ACGT | 2 cut(s) | 140, 754 |
| MaeIII | GTNAC | 2 cut(s) | 271, 776 |
| MboII | GAAGA | 3 cut(s) | 439, 488, 725 |
| MfeI | CAATTG | 1 cut(s) | 53 |
| MhlI | GDGCHC | 1 cut(s) | 107 |
| MluCI | AATT | 2 cut(s) | 53, 806 |
| MlyI | GAGTC | 1 cut(s) | 788 |
| MmeI | TCCRAC | 1 cut(s) | 277 |
| MseI | TTAA | 2 cut(s) | 23, 524 |
| MspI | CCGG | 3 cut(s) | 319, 638, 701 |
| MspR9I | CCNGG | 2 cut(s) | 320, 639 |
| MunI | CAATTG | 1 cut(s) | 53 |
| Mva1269I | GAATGC | 2 cut(s) | 440, 585 |
| MvnI | CGCG | 2 cut(s) | 673, 763 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 49, 102, 771 |
| NciI | CCSGG | 2 cut(s) | 320, 639 |
| NcoI | CCATGG | 1 cut(s) | 539 |
| NdeI | CATATG | 1 cut(s) | 488 |
| NlaIII | CATG | 6 cut(s) | 52, 103, 419, 469, 543, 740 |
| NmeAIII | GCCGAG | 1 cut(s) | 84 |
| NmuCI | GTSAC | 1 cut(s) | 271 |
| NspI | RCATGY | 1 cut(s) | 52 |
| PaeR7I | CTCGAG | 1 cut(s) | 597 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 349 |
| PctI | GAATGC | 2 cut(s) | 440, 585 |
| PfeI | GAWTC | 3 cut(s) | 371, 382, 723 |
| PflFI | GACNNNGTC | 1 cut(s) | 357 |
| PkrI | GCNGC | 2 cut(s) | 111, 392 |
| PleI | GAGTC | 1 cut(s) | 788 |
| PpsI | GAGTC | 1 cut(s) | 788 |
| Ppu21I | YACGTR | 2 cut(s) | 141, 755 |
| PspPI | GGNCC | 3 cut(s) | 196, 227, 302 |
| PsyI | GACNNNGTC | 1 cut(s) | 357 |
| RsaI | GTAC | 4 cut(s) | 256, 330, 625, 757 |
| RsaNI | GTAC | 4 cut(s) | 255, 329, 624, 756 |
| SaqAI | TTAA | 2 cut(s) | 23, 524 |
| SatI | GCNGC | 2 cut(s) | 110, 391 |
| Sau96I | GGNCC | 3 cut(s) | 196, 227, 302 |
| SchI | GAGTC | 1 cut(s) | 788 |
| ScrFI | CCNGG | 2 cut(s) | 320, 639 |
| SduI | GDGCHC | 1 cut(s) | 107 |
| SetI | ASST | 9 cut(s) | 143, 206, 211, 217, 551, 577, 651, 747, 757 |
| Sfr274I | CTCGAG | 1 cut(s) | 597 |
| SinI | GGWCC | 1 cut(s) | 227 |
| SlaI | CTCGAG | 1 cut(s) | 597 |
| SmlI | CTYRAG | 2 cut(s) | 597, 617 |
| SmoI | CTYRAG | 2 cut(s) | 597, 617 |
| SnaBI | TACGTA | 1 cut(s) | 755 |
| Sse9I | AATT | 2 cut(s) | 53, 806 |
| SsiI | CCGC | 4 cut(s) | 110, 191, 391, 761 |
| StyD4I | CCNGG | 2 cut(s) | 318, 637 |
| StyI | CCWWGG | 4 cut(s) | 223, 471, 539, 575 |
| TaaI | ACNGT | 3 cut(s) | 75, 254, 379 |
| TaiI | ACGT | 2 cut(s) | 143, 757 |
| TaqI | TCGA | 4 cut(s) | 157, 352, 499, 598 |
| TasI | AATT | 2 cut(s) | 53, 806 |
| TauI | GCSGC | 2 cut(s) | 112, 393 |
| TfiI | GAWTC | 3 cut(s) | 371, 382, 723 |
| Tru1I | TTAA | 2 cut(s) | 23, 524 |
| Tru9I | TTAA | 2 cut(s) | 23, 524 |
| TscAI | CASTG | 1 cut(s) | 294 |
| TseFI | GTSAC | 1 cut(s) | 271 |
| Tsp45I | GTSAC | 1 cut(s) | 271 |
| TspDTI | ATGAA | 2 cut(s) | 676, 725 |
| TspRI | CASTG | 1 cut(s) | 294 |
| Tth111I | GACNNNGTC | 1 cut(s) | 357 |
| VpaK11BI | GGWCC | 1 cut(s) | 227 |
| XceI | RCATGY | 1 cut(s) | 52 |
| XhoI | CTCGAG | 1 cut(s) | 597 |