Rmu_sc0002872.1_g000005

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002872.1
OG0000063
Physical Location & Seq
Reverse (-)
16087 .. 17105
1019 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002872.1_g000005.1.cds

Sequence Viewer

Length: 852 bp
atgatgaatttgcagagggccaaggtccaaaatgccattcctagtgaaacagaggaatccgtggaactaaccattgataaagatggccaaccaagtagtgacgaacctgtgggggagataatttctcctgaaataatggccgaaagcgaagttgcggcaatgaatatggaggagacacttgtgctcacccaaacttcaacgcaagctagtattccctcttcgtcgcttagtgagcaacacctggtgttggctaacaaactagccatttcgcaattaccaaccgctcaattgacatcaagggaggaagttgatggggctctgaaggtggtaaaggaaacgttagcgcagccattaaaagaatttgtggaaacagaccaactatcacaagtgaaagtggccatggatttgttgcttggagccaaatactttgcccctcccaaggtagctctcattggtgagaagctagaagtgttaacccaacaaatatcccgtgtagctggttcataccaagaaatagaaaaaaggagacaacaaatcttgacttgtgagcaaatgaagaaagccttggttcccgagtttgggttgtgtatggaacaaaaaagggttgtggagtctcttgaaggcaagataaatgagttggaaagtcaattggcgtccttgaaacaagagagacaagaagtgggggaaaagctccttcaaaggagtaagcaatgtttccaaagccaaggacaactgaagaagatagaggccgatttgaaaaattccgagcctaggtgtatgcaacttgagagtgaccttcaggccactggttgtaccttggaagctcttaattctttattagccgaggaatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

283

Amino Acids

31.34

Weight (kDa)

4.76

Isoelectric Point (pI)

58.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000063)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21382 FvH4_1g29794 FvH4_1g29795 FvH4_2g35573 FvH4_2g35574 FvH4_4g18552 FvH4_5g16044
malus_domestica MD05G1017000.v1.1
prunus_persica Prupe.3G140800_v2.0.a1 Prupe.6G164100_v2.0.a1
pyrus_communis pycom01g04330 pycom03g19820 pycom04g06720 pycom06g11360 pycom06g19000 pycom10g08100 pycom13g16660 pycom13g27590 pycom13g27640 pycom13g27890 pycom16g11770 pycom16g19530
rosa_chinensis RchiOBHm_Chr1g0317341 RchiOBHm_Chr1g0317351 RchiOBHm_Chr1g0320431 RchiOBHm_Chr1g0320711 RchiOBHm_Chr1g0320721 RchiOBHm_Chr1g0321611 RchiOBHm_Chr1g0321621 RchiOBHm_Chr1g0321631 RchiOBHm_Chr1g0323651 RchiOBHm_Chr1g0332991 RchiOBHm_Chr1g0333001 RchiOBHm_Chr1g0335981 RchiOBHm_Chr1g0335991 RchiOBHm_Chr1g0336001 RchiOBHm_Chr1g0350201 RchiOBHm_Chr1g0368201 RchiOBHm_Chr2g0105531 RchiOBHm_Chr2g0105541 RchiOBHm_Chr2g0116571 RchiOBHm_Chr2g0116581 RchiOBHm_Chr2g0121071 RchiOBHm_Chr2g0131351 RchiOBHm_Chr2g0131661 RchiOBHm_Chr2g0133021 RchiOBHm_Chr2g0138181 RchiOBHm_Chr2g0138191 RchiOBHm_Chr2g0142701 RchiOBHm_Chr2g0142711 RchiOBHm_Chr2g0152981 RchiOBHm_Chr3g0456181 RchiOBHm_Chr3g0456191 RchiOBHm_Chr3g0493631 RchiOBHm_Chr3g0496201 RchiOBHm_Chr4g0401541 RchiOBHm_Chr4g0410311 RchiOBHm_Chr4g0410321 RchiOBHm_Chr4g0419231 RchiOBHm_Chr4g0419511 RchiOBHm_Chr4g0419521 RchiOBHm_Chr5g0004311 RchiOBHm_Chr5g0004321 RchiOBHm_Chr5g0038131 RchiOBHm_Chr5g0038251 RchiOBHm_Chr5g0038261 RchiOBHm_Chr5g0038271 RchiOBHm_Chr5g0052241 RchiOBHm_Chr5g0053911 RchiOBHm_Chr5g0074641 RchiOBHm_Chr5g0076651 RchiOBHm_Chr5g0076661 RchiOBHm_Chr6g0249161 RchiOBHm_Chr6g0249171 RchiOBHm_Chr6g0250961 RchiOBHm_Chr6g0253701 RchiOBHm_Chr6g0262131 RchiOBHm_Chr6g0263181 RchiOBHm_Chr6g0263231 RchiOBHm_Chr6g0263241 RchiOBHm_Chr6g0263251 RchiOBHm_Chr6g0291271 RchiOBHm_Chr7g0194611 RchiOBHm_Chr7g0219691 RchiOBHm_Chr7g0219701 RchiOBHm_Chr7g0225431 RchiOBHm_Chr7g0234221 RchiOBHm_Chr7g0238711 RchiOBHm_Chr7g0238721 RchiOBHm_Chr7g0238731 RchiOBHm_Chr7g0239611 RchiOBHm_Chr7g0239621
rosa_laevigata RLG00000001361 RLG00000001376 RLG00000001860 RLG00000002051 RLG00000002362 RLG00000008940 RLG00000012764 RLG00000018782 RLG00000029639 RLG00000030151
rosa_multiflora Rmu_co8090794.1_g000001 Rmu_co8135356.1_g000001 Rmu_co8224968.1_g000001 Rmu_sc0000016.1_g000020 Rmu_sc0000029.1_g000061 Rmu_sc0000035.1_g000032 Rmu_sc0000060.1_g000041 Rmu_sc0000148.1_g000041 Rmu_sc0000315.1_g000084 Rmu_sc0000527.1_g000005 Rmu_sc0000527.1_g000007 Rmu_sc0000527.1_g000008 Rmu_sc0000648.1_g000002 Rmu_sc0000762.1_g000076 Rmu_sc0000870.1_g000003 Rmu_sc0000870.1_g000004 Rmu_sc0000948.1_g000037 Rmu_sc0000997.1_g000003 Rmu_sc0001047.1_g000041 Rmu_sc0001047.1_g000042 Rmu_sc0001075.1_g000044 Rmu_sc0001174.1_g000006 Rmu_sc0001235.1_g000025 Rmu_sc0001292.1_g000008 Rmu_sc0001301.1_g000038 Rmu_sc0001461.1_g000069 Rmu_sc0001461.1_g000070 Rmu_sc0001669.1_g000041 Rmu_sc0001689.1_g000027 Rmu_sc0001896.1_g000008 Rmu_sc0001909.1_g000013 Rmu_sc0002170.1_g000038 Rmu_sc0002200.1_g000014 Rmu_sc0002283.1_g000027 Rmu_sc0002284.1_g000014 Rmu_sc0002294.1_g000017 Rmu_sc0002294.1_g000018 Rmu_sc0002307.1_g000020 Rmu_sc0002307.1_g000021 Rmu_sc0002307.1_g000023 Rmu_sc0002357.1_g000054 Rmu_sc0002409.1_g000005 Rmu_sc0002535.1_g000002 Rmu_sc0002589.1_g000014 Rmu_sc0002759.1_g000016 Rmu_sc0002759.1_g000017 Rmu_sc0002777.1_g000015 Rmu_sc0002824.1_g000016 Rmu_sc0002872.1_g000005 Rmu_sc0002872.1_g000012 Rmu_sc0002872.1_g000013 Rmu_sc0002942.1_g000019 Rmu_sc0003337.1_g000001 Rmu_sc0003410.1_g000052 Rmu_sc0003445.1_g000010 Rmu_sc0003773.1_g000007 Rmu_sc0003773.1_g000008 Rmu_sc0003895.1_g000002 Rmu_sc0004063.1_g000006 Rmu_sc0004088.1_g000009 Rmu_sc0004088.1_g000010 Rmu_sc0004174.1_g000027 Rmu_sc0004196.1_g000010 Rmu_sc0004515.1_g000006 Rmu_sc0004727.1_g000010 Rmu_sc0004755.1_g000018 Rmu_sc0005016.1_g000030 Rmu_sc0005026.1_g000001 Rmu_sc0005044.1_g000007 Rmu_sc0005284.1_g000001 Rmu_sc0005431.1_g000030 Rmu_sc0005802.1_g000014 Rmu_sc0005802.1_g000015 Rmu_sc0005994.1_g000004 Rmu_sc0005994.1_g000005 Rmu_sc0006059.1_g000048 Rmu_sc0006583.1_g000013 Rmu_sc0006824.1_g000009 Rmu_sc0007458.1_g000005 Rmu_sc0007707.1_g000002 Rmu_sc0008242.1_g000012 Rmu_sc0008713.1_g000006 Rmu_sc0008770.1_g000008 Rmu_sc0009785.1_g000004 Rmu_sc0009785.1_g000005 Rmu_sc0010125.1_g000001 Rmu_sc0010211.1_g000004 Rmu_sc0011034.1_g000001 Rmu_sc0011833.1_g000006 Rmu_sc0014851.1_g000001 Rmu_sc0014899.1_g000001 Rmu_sc0015060.1_g000003 Rmu_sc0015186.1_g000001 Rmu_sc0015248.1_g000003 Rmu_sc0015248.1_g000004 Rmu_sc0015314.1_g000001 Rmu_sc0018098.1_g000002 Rmu_sc0022706.1_g000004 Rmu_sc0023350.1_g000002 Rmu_sc0027636.1_g000001 Rmu_sc0027672.1_g000003 Rmu_sc0030879.1_g000001 Rmu_ssc0000008.1_g000029 Rmu_ssc0000019.1_g000014 Rmu_ssc0000050.1_g000082 Rmu_ssc0000282.1_g000004 Rmu_ssc0000311.1_g000010
rosa_roxburghii Rroxscaffold_1G00015190 Rroxscaffold_1G00031880 Rroxscaffold_1G00031890 Rroxscaffold_1G00059310 Rroxscaffold_1G00060420 Rroxscaffold_1G00067930 Rroxscaffold_1G00075030 Rroxscaffold_2G00082210 Rroxscaffold_2G00122970 Rroxscaffold_3G00218230 Rroxscaffold_3G00219020 Rroxscaffold_3G00219030 Rroxscaffold_3G00223680 Rroxscaffold_3G00223690 Rroxscaffold_3G00223700 Rroxscaffold_3G00226870 Rroxscaffold_3G00226880 Rroxscaffold_3G00232990 Rroxscaffold_3G00265610 Rroxscaffold_3G00265620 Rroxscaffold_3G00265630 Rroxscaffold_4G00318660 Rroxscaffold_4G00319060 Rroxscaffold_4G00323500 Rroxscaffold_5G00357520 Rroxscaffold_5G00366150 Rroxscaffold_5G00377470 Rroxscaffold_6G00395700 Rroxscaffold_6G00413950 Rroxscaffold_7G00187650 Rroxscaffold_7G00198290 Rroxscaffold_7G00198300 Rroxscaffold_7G00208060
rosa_rugosa Rorug01G0173900 Rorug01G0174000 Rorug01G0174100 Rorug01G0174100 Rorug02G0341200 Rorug04G0135700 Rorug04G0135800 Rorug05G0032500 Rorug06G0021800
rosa_samantha Rh1AG036600 Rh1AG245800 Rh1CG021700 Rh1CG021800 Rh1CG085800 Rh1CG085900 Rh1CG187900 Rh1CG229600 Rh1CG239600 Rh1CG246500 Rh1CG246600 Rh2BG478100 Rh2DG341300 Rh2DG366600 Rh2DG375700 Rh2DG384300 Rh2DG487000 Rh2DG504000 Rh2DG504100 Rh3AG311800 Rh3AG327500 Rh3AG328300 Rh3BG345100 Rh3CG320100 Rh4AG005700 Rh4AG067900 Rh4AG068000 Rh4AG084400 Rh4AG106700 Rh4AG160000 Rh4AG173900 Rh4AG174000 Rh4CG125300 Rh4CG125500 Rh4CG264500 Rh4DG110800 Rh5AG047300 Rh5AG085200 Rh5AG126300 Rh5AG127300 Rh5AG203000 Rh5AG332400 Rh5AG332500 Rh5AG342400 Rh5AG344100 Rh5AG375600 Rh5AG378300 Rh5AG386000 Rh5AG529600 Rh5BG125200 Rh5CG137600 Rh5CG137700 Rh5DG125200 Rh6BG134100 Rh6BG175400 Rh6BG179500 Rh6BG179600 Rh6BG181600 Rh6BG181700 Rh6BG191100 Rh6BG232900 Rh6BG259700 Rh6BG259800 Rh7AG028000 Rh7AG319400 Rh7AG352700 Rh7AG352800 Rh7AG352900 Rh7AG482500 Rh7AG482600 Rh7AG503800 Rh7BG334700 Rh7CG200100 Rh7CG336200 Rh7CG370200 Rh7CG370400 Rh7CG370500
rosa_wichuraiana Rw1G001580 Rw1G003570 Rw1G004260 Rw1G004270 Rw1G021170 Rw2G019390 Rw2G040280 Rw2G044050 Rw4G004430 Rw5G010950 Rw5G018350 Rw5G032890 Rw6G002840 Rw6G006510 Rw6G007780 Rw6G033790 Rw7G036320 Rw7G040550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 284
AciI CCGC 2 cut(s) 155, 282
AclI AACGTT 1 cut(s) 338
AcoI YGGCCR 3 cut(s) 85, 138, 396
AcsI RAATTY 3 cut(s) 7, 359, 760
AcuI CTGAAG 3 cut(s) 341, 755, 782
AcyI GRCGYC 1 cut(s) 653
AdeI CACNNNGTG 1 cut(s) 244
AfaI GTAC 1 cut(s) 814
AfiI CCNNNNNNNGG 5 cut(s) 247, 439, 578, 579, 771
AgsI TTSAA 5 cut(s) 198, 620, 661, 698, 757
AjnI CCWGG 1 cut(s) 240
AjuI GAANNNNNNNTTGG 4 cut(s) 21, 53, 548, 580
AluBI AGCT 6 cut(s) 206, 446, 463, 497, 691, 824
AluI AGCT 6 cut(s) 206, 446, 463, 497, 691, 824
Alw21I GWGCWC 1 cut(s) 186
Alw26I GTCTC 4 cut(s) 167, 520, 618, 664
Ama87I CYCGRG 1 cut(s) 572
AoxI GGCC 6 cut(s) 18, 85, 138, 396, 747, 801
ApeKI GCWGC 1 cut(s) 346
ApoI RAATTY 3 cut(s) 7, 359, 760
AspA2I CCTAGG 1 cut(s) 770
AspLEI GCGC 1 cut(s) 346
AspS9I GGNCC 2 cut(s) 18, 25
AsuHPI GGTGA 2 cut(s) 178, 467
AvaI CYCGRG 1 cut(s) 572
AvaII GGWCC 1 cut(s) 25
AvrII CCTAGG 1 cut(s) 770
BalI TGGCCA 2 cut(s) 87, 398
BanII GRGCYC 1 cut(s) 319
BarI GAAGNNNNNNTAC 2 cut(s) 202, 234
Bbv12I GWGCWC 1 cut(s) 186
BbvI GCAGC 1 cut(s) 358
BccI CCATC 2 cut(s) 77, 305
BciT130I CCWGG 1 cut(s) 242
BcoDI GTCTC 4 cut(s) 167, 520, 618, 664
BfaI CTAG 5 cut(s) 42, 207, 260, 464, 771
BisI GCNGC 2 cut(s) 156, 347
BlnI CCTAGG 1 cut(s) 770
BlsI GCNGC 2 cut(s) 157, 348
Bme1390I CCNGG 1 cut(s) 242
Bme18I GGWCC 1 cut(s) 25
BmeT110I CYCGRG 1 cut(s) 572
BmgT120I GGNCC 2 cut(s) 18, 25
BmiI GGNNCC 2 cut(s) 418, 570
BmrFI CCNGG 1 cut(s) 242
BpuEI CTTGAG 1 cut(s) 806
BsaHI GRCGYC 1 cut(s) 653
BsaJI CCNNGG 9 cut(s) 21, 60, 399, 438, 564, 724, 770, 816, 843
Bsc4I CCNNNNNNNGG 5 cut(s) 247, 439, 578, 579, 771
Bse1I ACTGG 1 cut(s) 811
Bse3DI GCAATG 2 cut(s) 165, 716
BseBI CCWGG 1 cut(s) 242
BseDI CCNNGG 9 cut(s) 21, 60, 399, 438, 564, 724, 770, 816, 843
BseLI CCNNNNNNNGG 5 cut(s) 247, 439, 578, 579, 771
BseMI GCAATG 2 cut(s) 165, 716
BseNI ACTGG 1 cut(s) 811
BseRI GAGGAG 1 cut(s) 185
BseXI GCAGC 1 cut(s) 358
BshFI GGCC 6 cut(s) 20, 87, 140, 398, 749, 803
BsiHKAI GWGCWC 1 cut(s) 186
BsiHKCI CYCGRG 1 cut(s) 572
BslI CCNNNNNNNGG 5 cut(s) 247, 439, 578, 579, 771
BsmAI GTCTC 4 cut(s) 167, 520, 618, 664
BsnI GGCC 6 cut(s) 20, 87, 140, 398, 749, 803
BsoBI CYCGRG 1 cut(s) 572
Bsp1286I GDGCHC 2 cut(s) 186, 319
Bsp19I CCATGG 1 cut(s) 399
BspACI CCGC 2 cut(s) 155, 282
BspANI GGCC 6 cut(s) 20, 87, 140, 398, 749, 803
BspLI GGNNCC 2 cut(s) 418, 570
BsrBI CCGCTC 1 cut(s) 284
BsrDI GCAATG 2 cut(s) 165, 716
BsrI ACTGG 1 cut(s) 811
BssECI CCNNGG 9 cut(s) 21, 60, 399, 438, 564, 724, 770, 816, 843
BssNI GRCGYC 1 cut(s) 653
BssT1I CCWWGG 7 cut(s) 21, 399, 438, 564, 724, 770, 816
Bst2UI CCWGG 1 cut(s) 242
Bst6I CTCTTC 1 cut(s) 223
BstACI GRCGYC 1 cut(s) 653
BstC8I GCNNGC 1 cut(s) 204
BstDEI CTNAG 1 cut(s) 227
BstDSI CCRYGG 2 cut(s) 60, 399
BstHHI GCGC 1 cut(s) 346
BstMAI GTCTC 4 cut(s) 167, 520, 618, 664
BstMWI GCNNNNNNNGC 1 cut(s) 232
BstNI CCWGG 1 cut(s) 242
BstSCI CCNGG 1 cut(s) 240
BstV1I GCAGC 1 cut(s) 358
BsuRI GGCC 6 cut(s) 20, 87, 140, 398, 749, 803
BtgI CCRYGG 2 cut(s) 60, 399
BtsIMutI CAGTG 1 cut(s) 804
Cac8I GCNNGC 1 cut(s) 204
CfoI GCGC 1 cut(s) 346
Cfr13I GGNCC 2 cut(s) 18, 25
CseI GACGC 1 cut(s) 642
CsiI ACCWGGT 1 cut(s) 240
Csp6I GTAC 1 cut(s) 813
CviAII CATG 1 cut(s) 400
CviQI GTAC 1 cut(s) 813
DdeI CTNAG 1 cut(s) 227
DraIII CACNNNGTG 1 cut(s) 244
EaeI YGGCCR 3 cut(s) 85, 138, 396
Eam1104I CTCTTC 1 cut(s) 223
EarI CTCTTC 1 cut(s) 223
Eco130I CCWWGG 7 cut(s) 21, 399, 438, 564, 724, 770, 816
Eco24I GRGCYC 1 cut(s) 319
Eco47I GGWCC 1 cut(s) 25
Eco57I CTGAAG 3 cut(s) 341, 755, 782
Eco88I CYCGRG 1 cut(s) 572
EcoRII CCWGG 1 cut(s) 240
EcoT14I CCWWGG 7 cut(s) 21, 399, 438, 564, 724, 770, 816
EcoT38I GRGCYC 1 cut(s) 319
ErhI CCWWGG 7 cut(s) 21, 399, 438, 564, 724, 770, 816
FaeI CATG 1 cut(s) 403
FaiI YATR 5 cut(s) 167, 401, 505, 590, 779
FalI AAGNNNNNCTT 2 cut(s) 548, 580
FatI CATG 1 cut(s) 399
Fnu4HI GCNGC 2 cut(s) 156, 347
FriOI GRGCYC 1 cut(s) 319
Fsp4HI GCNGC 2 cut(s) 156, 347
FspBI CTAG 5 cut(s) 42, 207, 260, 464, 771
GlaI GCGC 1 cut(s) 345
GluI GCNGC 2 cut(s) 156, 347
HaeIII GGCC 6 cut(s) 20, 87, 140, 398, 749, 803
HgaI GACGC 1 cut(s) 642
HhaI GCGC 1 cut(s) 346
Hin1I GRCGYC 1 cut(s) 653
Hin1II CATG 1 cut(s) 403
Hin6I GCGC 1 cut(s) 344
HinP1I GCGC 1 cut(s) 344
HincII GTYRAC 1 cut(s) 474
HindII GTYRAC 1 cut(s) 474
HinfI GANTC 2 cut(s) 56, 611
HpaI GTTAAC 1 cut(s) 474
HphI GGTGA 2 cut(s) 178, 467
Hpy166II GTNNAC 1 cut(s) 474
Hpy188I TCNGA 2 cut(s) 321, 766
Hpy188III TCNNGA 4 cut(s) 128, 538, 572, 617
Hpy8I GTNNAC 1 cut(s) 474
Hpy99I CGWCG 1 cut(s) 226
HpyAV CCTTC 4 cut(s) 316, 614, 704, 806
HpyCH4IV ACGT 1 cut(s) 338
HpyCH4V TGCA 2 cut(s) 13, 781
HpyF10VI GCNNNNNNNGC 1 cut(s) 232
HpyF3I CTNAG 1 cut(s) 227
HpySE526I ACGT 1 cut(s) 338
Hsp92I GRCGYC 1 cut(s) 653
Hsp92II CATG 1 cut(s) 403
HspAI GCGC 1 cut(s) 344
KspAI GTTAAC 1 cut(s) 474
LmnI GCTCC 2 cut(s) 416, 696
LpnPI CCDG 7 cut(s) 120, 141, 227, 254, 483, 785, 792
Lsp1109I GCAGC 1 cut(s) 358
MabI ACCWGGT 1 cut(s) 240
MaeI CTAG 5 cut(s) 42, 207, 260, 464, 771
MaeII ACGT 1 cut(s) 338
MaeIII GTNAC 2 cut(s) 98, 791
MbiI CCGCTC 1 cut(s) 284
MboII GAAGA 4 cut(s) 210, 568, 748, 751
MfeI CAATTG 2 cut(s) 287, 647
MhlI GDGCHC 2 cut(s) 186, 319
MlsI TGGCCA 2 cut(s) 87, 398
MluCI AATT 8 cut(s) 7, 120, 272, 287, 359, 647, 760, 829
MluNI TGGCCA 2 cut(s) 87, 398
MlyI GAGTC 1 cut(s) 620
MmeI TCCRAC 1 cut(s) 618
MnlI CCTC 8 cut(s) 9, 46, 163, 226, 295, 444, 739, 838
Mox20I TGGCCA 2 cut(s) 87, 398
MscI TGGCCA 2 cut(s) 87, 398
MseI TTAA 3 cut(s) 353, 473, 828
Msp20I TGGCCA 2 cut(s) 87, 398
MspR9I CCNGG 1 cut(s) 242
MunI CAATTG 2 cut(s) 287, 647
MvaI CCWGG 1 cut(s) 242
MwoI GCNNNNNNNGC 1 cut(s) 232
NcoI CCATGG 1 cut(s) 399
NlaIII CATG 1 cut(s) 403
NlaIV GGNNCC 2 cut(s) 418, 570
NmuCI GTSAC 2 cut(s) 98, 791
PfeI GAWTC 1 cut(s) 56
PkrI GCNGC 2 cut(s) 157, 348
PleI GAGTC 1 cut(s) 619
PpsI GAGTC 1 cut(s) 619
Psp1406I AACGTT 1 cut(s) 338
Psp6I CCWGG 1 cut(s) 240
PspGI CCWGG 1 cut(s) 240
PspN4I GGNNCC 2 cut(s) 418, 570
PspPI GGNCC 2 cut(s) 18, 25
RsaI GTAC 1 cut(s) 814
RsaNI GTAC 1 cut(s) 813
SaqAI TTAA 3 cut(s) 353, 473, 828
SatI GCNGC 2 cut(s) 156, 347
Sau96I GGNCC 2 cut(s) 18, 25
SchI GAGTC 1 cut(s) 620
ScrFI CCNGG 1 cut(s) 242
SduI GDGCHC 2 cut(s) 186, 319
SexAI ACCWGGT 1 cut(s) 240
SinI GGWCC 1 cut(s) 25
SmlI CTYRAG 1 cut(s) 785
SmoI CTYRAG 1 cut(s) 785
Sse9I AATT 8 cut(s) 7, 120, 272, 287, 359, 647, 760, 829
SsiI CCGC 2 cut(s) 155, 282
SspMI CTAG 5 cut(s) 42, 207, 260, 464, 771
StyD4I CCNGG 1 cut(s) 240
StyI CCWWGG 7 cut(s) 21, 399, 438, 564, 724, 770, 816
TaiI ACGT 1 cut(s) 341
TasI AATT 8 cut(s) 7, 120, 272, 287, 359, 647, 760, 829
TauI GCSGC 1 cut(s) 158
TfiI GAWTC 1 cut(s) 56
Tru1I TTAA 3 cut(s) 353, 473, 828
Tru9I TTAA 3 cut(s) 353, 473, 828
TscAI CASTG 1 cut(s) 811
TseFI GTSAC 2 cut(s) 98, 791
TseI GCWGC 1 cut(s) 346
Tsp45I GTSAC 2 cut(s) 98, 791
TspDTI ATGAA 4 cut(s) 20, 176, 492, 569
TspGWI ACGGA 1 cut(s) 49
TspRI CASTG 1 cut(s) 811
VpaK11BI GGWCC 1 cut(s) 25
XapI RAATTY 3 cut(s) 7, 359, 760
XmaJI CCTAGG 1 cut(s) 770
XspI CTAG 5 cut(s) 42, 207, 260, 464, 771
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.