dipeptidyl-peptidase activity
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PMD | PF10536 | 132 - 514 | 4.3e-42 | Plant mobile domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 923 |
| AccB1I | GGYRCC | 2 cut(s) | 125, 346 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1203 |
| AccII | CGCG | 4 cut(s) | 195, 197, 307, 1336 |
| AciI | CCGC | 9 cut(s) | 161, 185, 197, 305, 452, 477, 704, 749, 1591 |
| AclWI | GGATC | 1 cut(s) | 1272 |
| AcoI | YGGCCR | 7 cut(s) | 66, 314, 554, 1013, 1051, 1089, 1298 |
| AcsI | RAATTY | 8 cut(s) | 71, 83, 426, 493, 587, 836, 946, 1669 |
| AcuI | CTGAAG | 2 cut(s) | 352, 1760 |
| AcyI | GRCGYC | 2 cut(s) | 12, 126 |
| AfaI | GTAC | 8 cut(s) | 115, 389, 694, 871, 916, 1169, 1288, 1626 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1203, 1605 |
| AflIII | ACRYGT | 1 cut(s) | 1656 |
| AgsI | TTSAA | 9 cut(s) | 56, 122, 298, 980, 1120, 1478, 1493, 1669, 1837 |
| AjnI | CCWGG | 3 cut(s) | 281, 1300, 1702 |
| AleI | CACNNNNGTG | 1 cut(s) | 331 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1379, 1411 |
| AluBI | AGCT | 6 cut(s) | 322, 647, 857, 864, 881, 1795 |
| AluI | AGCT | 6 cut(s) | 322, 647, 857, 864, 881, 1795 |
| Alw21I | GWGCWC | 1 cut(s) | 363 |
| Alw26I | GTCTC | 5 cut(s) | 610, 1184, 1401, 1577, 1759 |
| AlwI | GGATC | 1 cut(s) | 1272 |
| Ama87I | CYCGRG | 2 cut(s) | 503, 1260 |
| ApeKI | GCWGC | 4 cut(s) | 455, 536, 770, 1234 |
| ApoI | RAATTY | 8 cut(s) | 71, 83, 426, 493, 587, 836, 946, 1669 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1391 |
| AspLEI | GCGC | 4 cut(s) | 128, 197, 924, 1336 |
| AspS9I | GGNCC | 7 cut(s) | 182, 276, 436, 506, 887, 962, 1073 |
| AsuC2I | CCSGG | 1 cut(s) | 31 |
| AsuHPI | GGTGA | 2 cut(s) | 1106, 1580 |
| AvaI | CYCGRG | 2 cut(s) | 503, 1260 |
| AvaII | GGWCC | 4 cut(s) | 276, 436, 962, 1073 |
| BanI | GGYRCC | 2 cut(s) | 125, 346 |
| BanII | GRGCYC | 1 cut(s) | 1611 |
| BbsI | GAAGAC | 2 cut(s) | 1493, 1748 |
| Bbv12I | GWGCWC | 1 cut(s) | 363 |
| BbvI | GCAGC | 4 cut(s) | 442, 523, 757, 1221 |
| BccI | CCATC | 3 cut(s) | 214, 349, 559 |
| BceAI | ACGGC | 2 cut(s) | 113, 1133 |
| BciT130I | CCWGG | 3 cut(s) | 283, 1302, 1704 |
| BclI | TGATCA | 1 cut(s) | 627 |
| BcnI | CCSGG | 1 cut(s) | 31 |
| BcoDI | GTCTC | 5 cut(s) | 610, 1184, 1401, 1577, 1759 |
| BfaI | CTAG | 7 cut(s) | 270, 609, 738, 843, 878, 1683, 1870 |
| BfoI | RGCGCY | 1 cut(s) | 129 |
| BisI | GCNGC | 6 cut(s) | 185, 453, 456, 537, 771, 1235 |
| BlsI | GCNGC | 6 cut(s) | 186, 454, 457, 538, 772, 1236 |
| Bme1390I | CCNGG | 4 cut(s) | 31, 283, 1302, 1704 |
| Bme18I | GGWCC | 4 cut(s) | 276, 436, 962, 1073 |
| BmeT110I | CYCGRG | 2 cut(s) | 503, 1260 |
| BmgT120I | GGNCC | 7 cut(s) | 182, 276, 436, 506, 887, 962, 1073 |
| BmiI | GGNNCC | 5 cut(s) | 127, 183, 348, 551, 963 |
| BmrFI | CCNGG | 4 cut(s) | 31, 283, 1302, 1704 |
| BmsI | GCATC | 5 cut(s) | 37, 587, 646, 1073, 1221 |
| BpiI | GAAGAC | 2 cut(s) | 1493, 1748 |
| BpmI | CTGGAG | 1 cut(s) | 304 |
| BpuEI | CTTGAG | 1 cut(s) | 606 |
| BpuMI | CCSGG | 1 cut(s) | 31 |
| BsaHI | GRCGYC | 2 cut(s) | 12, 126 |
| BsaI | GGTCTC | 2 cut(s) | 610, 1577 |
| BsaJI | CCNNGG | 5 cut(s) | 129, 350, 502, 1215, 1238 |
| BsaWI | WCCGGW | 1 cut(s) | 1455 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1379, 1409 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1203, 1605 |
| Bse118I | RCCGGY | 3 cut(s) | 138, 438, 1091 |
| BseBI | CCWGG | 3 cut(s) | 283, 1302, 1704 |
| BseDI | CCNNGG | 5 cut(s) | 129, 350, 502, 1215, 1238 |
| BseGI | GGATG | 5 cut(s) | 360, 570, 978, 1144, 1231 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1203, 1605 |
| BseMII | CTCAG | 3 cut(s) | 30, 321, 1475 |
| BseRI | GAGGAG | 4 cut(s) | 770, 864, 1387, 1747 |
| BseX3I | CGGCCG | 1 cut(s) | 1089 |
| BseXI | GCAGC | 4 cut(s) | 442, 523, 757, 1221 |
| Bsh1236I | CGCG | 4 cut(s) | 195, 197, 307, 1336 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1092 |
| BshNI | GGYRCC | 2 cut(s) | 125, 346 |
| BsiEI | CGRYCG | 1 cut(s) | 1092 |
| BsiHKAI | GWGCWC | 1 cut(s) | 363 |
| BsiHKCI | CYCGRG | 2 cut(s) | 503, 1260 |
| BsiSI | CCGG | 6 cut(s) | 30, 139, 439, 553, 1092, 1456 |
| BslFI | GGGAC | 1 cut(s) | 975 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1203, 1605 |
| BsmAI | GTCTC | 5 cut(s) | 610, 1184, 1401, 1577, 1759 |
| BsmFI | GGGAC | 1 cut(s) | 975 |
| BsmI | GAATGC | 2 cut(s) | 176, 1084 |
| Bso31I | GGTCTC | 2 cut(s) | 610, 1577 |
| BsoBI | CYCGRG | 2 cut(s) | 503, 1260 |
| Bsp1286I | GDGCHC | 2 cut(s) | 363, 1611 |
| Bsp143I | GATC | 2 cut(s) | 627, 1264 |
| BspACI | CCGC | 9 cut(s) | 161, 185, 197, 305, 452, 477, 704, 749, 1591 |
| BspCNI | CTCAG | 3 cut(s) | 29, 322, 1474 |
| BspFNI | CGCG | 4 cut(s) | 195, 197, 307, 1336 |
| BspLI | GGNNCC | 5 cut(s) | 127, 183, 348, 551, 963 |
| BspPI | GGATC | 1 cut(s) | 1272 |
| BspT107I | GGYRCC | 2 cut(s) | 125, 346 |
| BspTNI | GGTCTC | 2 cut(s) | 610, 1577 |
| BsrFI | RCCGGY | 3 cut(s) | 138, 438, 1091 |
| BssAI | RCCGGY | 3 cut(s) | 138, 438, 1091 |
| BssECI | CCNNGG | 5 cut(s) | 129, 350, 502, 1215, 1238 |
| BssMI | GATC | 2 cut(s) | 627, 1264 |
| BssNI | GRCGYC | 2 cut(s) | 12, 126 |
| BssT1I | CCWWGG | 3 cut(s) | 350, 1215, 1238 |
| Bst2UI | CCWGG | 3 cut(s) | 283, 1302, 1704 |
| Bst4CI | ACNGT | 2 cut(s) | 404, 692 |
| BstACI | GRCGYC | 2 cut(s) | 12, 126 |
| BstC8I | GCNNGC | 2 cut(s) | 199, 203 |
| BstDEI | CTNAG | 7 cut(s) | 16, 330, 860, 1134, 1461, 1612, 1761 |
| BstDSI | CCRYGG | 1 cut(s) | 129 |
| BstEII | GGTNACC | 1 cut(s) | 1769 |
| BstF5I | GGATG | 5 cut(s) | 360, 570, 978, 1144, 1231 |
| BstFNI | CGCG | 4 cut(s) | 195, 197, 307, 1336 |
| BstH2I | RGCGCY | 1 cut(s) | 129 |
| BstHHI | GCGC | 4 cut(s) | 128, 197, 924, 1336 |
| BstKTI | GATC | 2 cut(s) | 630, 1267 |
| BstMAI | GTCTC | 5 cut(s) | 610, 1184, 1401, 1577, 1759 |
| BstMBI | GATC | 2 cut(s) | 627, 1264 |
| BstMCI | CGRYCG | 1 cut(s) | 1092 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 11, 74, 266, 313, 505, 710, 848 |
| BstNI | CCWGG | 3 cut(s) | 283, 1302, 1704 |
| BstNSI | RCATGY | 3 cut(s) | 205, 713, 1132 |
| BstPI | GGTNACC | 1 cut(s) | 1769 |
| BstSCI | CCNGG | 4 cut(s) | 29, 281, 1300, 1702 |
| BstUI | CGCG | 4 cut(s) | 195, 197, 307, 1336 |
| BstV1I | GCAGC | 4 cut(s) | 442, 523, 757, 1221 |
| BstV2I | GAAGAC | 2 cut(s) | 1493, 1748 |
| BstX2I | RGATCY | 1 cut(s) | 1264 |
| BstYI | RGATCY | 1 cut(s) | 1264 |
| BstZI | CGGCCG | 1 cut(s) | 1089 |
| BtgI | CCRYGG | 1 cut(s) | 129 |
| BtsCI | GGATG | 5 cut(s) | 360, 570, 978, 1144, 1231 |
| BtsI | GCAGTG | 2 cut(s) | 720, 1436 |
| BtsIMutI | CAGTG | 3 cut(s) | 409, 720, 1436 |
| Cac8I | GCNNGC | 2 cut(s) | 199, 203 |
| CfoI | GCGC | 4 cut(s) | 128, 197, 924, 1336 |
| Cfr10I | RCCGGY | 3 cut(s) | 138, 438, 1091 |
| Cfr13I | GGNCC | 7 cut(s) | 182, 276, 436, 506, 887, 962, 1073 |
| CseI | GACGC | 3 cut(s) | 20, 110, 1325 |
| Csp6I | GTAC | 8 cut(s) | 114, 388, 693, 870, 915, 1168, 1287, 1625 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1520, 1555 |
| CviQI | GTAC | 8 cut(s) | 114, 388, 693, 870, 915, 1168, 1287, 1625 |
| DdeI | CTNAG | 7 cut(s) | 16, 330, 860, 1134, 1461, 1612, 1761 |
| DinI | GGCGCC | 1 cut(s) | 127 |
| DpnI | GATC | 2 cut(s) | 629, 1266 |
| DpnII | GATC | 2 cut(s) | 627, 1264 |
| EaeI | YGGCCR | 7 cut(s) | 66, 314, 554, 1013, 1051, 1089, 1298 |
| EagI | CGGCCG | 1 cut(s) | 1089 |
| EclXI | CGGCCG | 1 cut(s) | 1089 |
| Eco130I | CCWWGG | 3 cut(s) | 350, 1215, 1238 |
| Eco24I | GRGCYC | 1 cut(s) | 1611 |
| Eco31I | GGTCTC | 2 cut(s) | 610, 1577 |
| Eco32I | GATATC | 1 cut(s) | 1257 |
| Eco47I | GGWCC | 4 cut(s) | 276, 436, 962, 1073 |
| Eco52I | CGGCCG | 1 cut(s) | 1089 |
| Eco57I | CTGAAG | 2 cut(s) | 352, 1760 |
| Eco88I | CYCGRG | 2 cut(s) | 503, 1260 |
| Eco91I | GGTNACC | 1 cut(s) | 1769 |
| EcoO65I | GGTNACC | 1 cut(s) | 1769 |
| EcoRI | GAATTC | 2 cut(s) | 587, 836 |
| EcoRII | CCWGG | 3 cut(s) | 281, 1300, 1702 |
| EcoRV | GATATC | 1 cut(s) | 1257 |
| EcoT14I | CCWWGG | 3 cut(s) | 350, 1215, 1238 |
| EcoT22I | ATGCAT | 1 cut(s) | 176 |
| EcoT38I | GRGCYC | 1 cut(s) | 1611 |
| EgeI | GGCGCC | 1 cut(s) | 127 |
| EheI | GGCGCC | 1 cut(s) | 127 |
| ErhI | CCWWGG | 3 cut(s) | 350, 1215, 1238 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 102, 134 |
| FaqI | GGGAC | 1 cut(s) | 975 |
| FauI | CCCGC | 3 cut(s) | 190, 312, 1584 |
| FbaI | TGATCA | 1 cut(s) | 627 |
| Fnu4HI | GCNGC | 6 cut(s) | 185, 453, 456, 537, 771, 1235 |
| FokI | GGATG | 5 cut(s) | 367, 577, 985, 1151, 1238 |
| FriOI | GRGCYC | 1 cut(s) | 1611 |
| Fsp4HI | GCNGC | 6 cut(s) | 185, 453, 456, 537, 771, 1235 |
| FspBI | CTAG | 7 cut(s) | 270, 609, 738, 843, 878, 1683, 1870 |
| FspI | TGCGCA | 1 cut(s) | 923 |
| GlaI | GCGC | 4 cut(s) | 127, 196, 923, 1335 |
| GluI | GCNGC | 6 cut(s) | 185, 453, 456, 537, 771, 1235 |
| GsuI | CTGGAG | 1 cut(s) | 304 |
| HaeII | RGCGCY | 1 cut(s) | 129 |
| HapII | CCGG | 6 cut(s) | 30, 139, 439, 553, 1092, 1456 |
| HgaI | GACGC | 3 cut(s) | 20, 110, 1325 |
| HhaI | GCGC | 4 cut(s) | 128, 197, 924, 1336 |
| Hin1I | GRCGYC | 2 cut(s) | 12, 126 |
| Hin6I | GCGC | 4 cut(s) | 126, 195, 922, 1334 |
| HinP1I | GCGC | 4 cut(s) | 126, 195, 922, 1334 |
| HincII | GTYRAC | 5 cut(s) | 144, 217, 244, 1340, 1545 |
| HindII | GTYRAC | 5 cut(s) | 144, 217, 244, 1340, 1545 |
| HinfI | GANTC | 7 cut(s) | 309, 393, 1045, 1392, 1459, 1493, 1752 |
| HpaI | GTTAAC | 1 cut(s) | 217 |
| HpaII | CCGG | 6 cut(s) | 30, 139, 439, 553, 1092, 1456 |
| HphI | GGTGA | 2 cut(s) | 1106, 1580 |
| Hpy166II | GTNNAC | 9 cut(s) | 116, 144, 217, 244, 279, 336, 1007, 1340, 1545 |
| Hpy188I | TCNGA | 3 cut(s) | 19, 37, 733 |
| Hpy188III | TCNNGA | 6 cut(s) | 1197, 1262, 1375, 1505, 1555, 1837 |
| Hpy8I | GTNNAC | 9 cut(s) | 116, 144, 217, 244, 279, 336, 1007, 1340, 1545 |
| HpyAV | CCTTC | 2 cut(s) | 706, 1182 |
| HpyCH4III | ACNGT | 2 cut(s) | 404, 692 |
| HpyCH4IV | ACGT | 4 cut(s) | 1202, 1656, 1856, 1866 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 11, 74, 266, 313, 505, 710, 848 |
| HpyF3I | CTNAG | 7 cut(s) | 16, 330, 860, 1134, 1461, 1612, 1761 |
| HpySE526I | ACGT | 4 cut(s) | 1202, 1656, 1856, 1866 |
| Hsp92I | GRCGYC | 2 cut(s) | 12, 126 |
| HspAI | GCGC | 4 cut(s) | 126, 195, 922, 1334 |
| KasI | GGCGCC | 1 cut(s) | 125 |
| Ksp22I | TGATCA | 1 cut(s) | 627 |
| KspAI | GTTAAC | 1 cut(s) | 217 |
| Kzo9I | GATC | 2 cut(s) | 627, 1264 |
| LmnI | GCTCC | 2 cut(s) | 285, 358 |
| Lsp1109I | GCAGC | 4 cut(s) | 442, 523, 757, 1221 |
| LweI | GCATC | 5 cut(s) | 37, 587, 646, 1073, 1221 |
| MaeI | CTAG | 7 cut(s) | 270, 609, 738, 843, 878, 1683, 1870 |
| MaeII | ACGT | 4 cut(s) | 1202, 1656, 1856, 1866 |
| MaeIII | GTNAC | 5 cut(s) | 931, 938, 1154, 1441, 1769 |
| MalI | GATC | 2 cut(s) | 629, 1266 |
| MboI | GATC | 2 cut(s) | 627, 1264 |
| MboII | GAAGA | 4 cut(s) | 358, 665, 1493, 1753 |
| MfeI | CAATTG | 2 cut(s) | 51, 1828 |
| MflI | RGATCY | 1 cut(s) | 1264 |
| MhlI | GDGCHC | 2 cut(s) | 363, 1611 |
| Mly113I | GGCGCC | 1 cut(s) | 126 |
| MlyI | GAGTC | 4 cut(s) | 318, 1039, 1453, 1761 |
| MmeI | TCCRAC | 1 cut(s) | 15 |
| Mph1103I | ATGCAT | 1 cut(s) | 176 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1391 |
| MseI | TTAA | 4 cut(s) | 87, 216, 1281, 1653 |
| MslI | CAYNNNNRTG | 1 cut(s) | 331 |
| MspI | CCGG | 6 cut(s) | 30, 139, 439, 553, 1092, 1456 |
| MspR9I | CCNGG | 4 cut(s) | 31, 283, 1302, 1704 |
| MunI | CAATTG | 2 cut(s) | 51, 1828 |
| Mva1269I | GAATGC | 2 cut(s) | 176, 1084 |
| MvaI | CCWGG | 3 cut(s) | 283, 1302, 1704 |
| MvnI | CGCG | 4 cut(s) | 195, 197, 307, 1336 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 11, 74, 266, 313, 505, 710, 848 |
| NarI | GGCGCC | 1 cut(s) | 126 |
| NciI | CCSGG | 1 cut(s) | 31 |
| NdeII | GATC | 2 cut(s) | 627, 1264 |
| NlaIV | GGNNCC | 5 cut(s) | 127, 183, 348, 551, 963 |
| NmeAIII | GCCGAG | 1 cut(s) | 1187 |
| NmuCI | GTSAC | 1 cut(s) | 931 |
| NsbI | TGCGCA | 1 cut(s) | 923 |
| NsiI | ATGCAT | 1 cut(s) | 176 |
| NspI | RCATGY | 3 cut(s) | 205, 713, 1132 |
| OliI | CACNNNNGTG | 1 cut(s) | 331 |
| PaeI | GCATGC | 1 cut(s) | 205 |
| PctI | GAATGC | 2 cut(s) | 176, 1084 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1391 |
| PfeI | GAWTC | 3 cut(s) | 393, 1392, 1493 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1203 |
| PkrI | GCNGC | 6 cut(s) | 186, 454, 457, 538, 772, 1236 |
| PleI | GAGTC | 4 cut(s) | 317, 1039, 1453, 1760 |
| PluTI | GGCGCC | 1 cut(s) | 129 |
| PpsI | GAGTC | 4 cut(s) | 317, 1039, 1453, 1760 |
| Psp6I | CCWGG | 3 cut(s) | 281, 1300, 1702 |
| PspEI | GGTNACC | 1 cut(s) | 1769 |
| PspGI | CCWGG | 3 cut(s) | 281, 1300, 1702 |
| PspN4I | GGNNCC | 5 cut(s) | 127, 183, 348, 551, 963 |
| PspPI | GGNCC | 7 cut(s) | 182, 276, 436, 506, 887, 962, 1073 |
| PsuI | RGATCY | 1 cut(s) | 1264 |
| RsaI | GTAC | 8 cut(s) | 115, 389, 694, 871, 916, 1169, 1288, 1626 |
| RsaNI | GTAC | 8 cut(s) | 114, 388, 693, 870, 915, 1168, 1287, 1625 |
| RseI | CAYNNNNRTG | 1 cut(s) | 331 |
| SaqAI | TTAA | 4 cut(s) | 87, 216, 1281, 1653 |
| SatI | GCNGC | 6 cut(s) | 185, 453, 456, 537, 771, 1235 |
| Sau3AI | GATC | 2 cut(s) | 627, 1264 |
| Sau96I | GGNCC | 7 cut(s) | 182, 276, 436, 506, 887, 962, 1073 |
| SchI | GAGTC | 4 cut(s) | 318, 1039, 1453, 1761 |
| ScrFI | CCNGG | 4 cut(s) | 31, 283, 1302, 1704 |
| SduI | GDGCHC | 2 cut(s) | 363, 1611 |
| SfaNI | GCATC | 5 cut(s) | 37, 587, 646, 1073, 1221 |
| SfoI | GGCGCC | 1 cut(s) | 127 |
| SinI | GGWCC | 4 cut(s) | 276, 436, 962, 1073 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 331 |
| SmlI | CTYRAG | 1 cut(s) | 621 |
| SmoI | CTYRAG | 1 cut(s) | 621 |
| SphI | GCATGC | 1 cut(s) | 205 |
| SsiI | CCGC | 9 cut(s) | 161, 185, 197, 305, 452, 477, 704, 749, 1591 |
| SspDI | GGCGCC | 1 cut(s) | 125 |
| SspI | AATATT | 1 cut(s) | 543 |
| SspMI | CTAG | 7 cut(s) | 270, 609, 738, 843, 878, 1683, 1870 |
| StyD4I | CCNGG | 4 cut(s) | 29, 281, 1300, 1702 |
| StyI | CCWWGG | 3 cut(s) | 350, 1215, 1238 |
| TaaI | ACNGT | 2 cut(s) | 404, 692 |
| TaiI | ACGT | 4 cut(s) | 1205, 1659, 1859, 1869 |
| TaqI | TCGA | 3 cut(s) | 24, 1188, 1727 |
| TaqII | GACCGA | 1 cut(s) | 1061 |
| TatI | WGTACW | 1 cut(s) | 387 |
| TauI | GCSGC | 2 cut(s) | 187, 455 |
| TfiI | GAWTC | 3 cut(s) | 393, 1392, 1493 |
| Tru1I | TTAA | 4 cut(s) | 87, 216, 1281, 1653 |
| Tru9I | TTAA | 4 cut(s) | 87, 216, 1281, 1653 |
| TscAI | CASTG | 3 cut(s) | 409, 720, 1436 |
| TseFI | GTSAC | 1 cut(s) | 931 |
| TseI | GCWGC | 4 cut(s) | 455, 536, 770, 1234 |
| Tsp45I | GTSAC | 1 cut(s) | 931 |
| TspDTI | ATGAA | 7 cut(s) | 171, 506, 735, 777, 849, 959, 1680 |
| TspGWI | ACGGA | 1 cut(s) | 992 |
| TspRI | CASTG | 3 cut(s) | 409, 720, 1436 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1203 |
| VpaK11BI | GGWCC | 4 cut(s) | 276, 436, 962, 1073 |
| XapI | RAATTY | 8 cut(s) | 71, 83, 426, 493, 587, 836, 946, 1669 |
| XceI | RCATGY | 3 cut(s) | 205, 713, 1132 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1391 |
| XspI | CTAG | 7 cut(s) | 270, 609, 738, 843, 878, 1683, 1870 |
| Zsp2I | ATGCAT | 1 cut(s) | 176 |