dipeptidyl-peptidase activity
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 295, 1326 |
| AccII | CGCG | 2 cut(s) | 2121, 2174 |
| AclWI | GGATC | 5 cut(s) | 869, 882, 2160, 2245, 2435 |
| AcoI | YGGCCR | 5 cut(s) | 263, 1666, 1890, 1911, 2116 |
| AcsI | RAATTY | 7 cut(s) | 32, 93, 114, 575, 956, 1472, 1997 |
| AcuI | CTGAAG | 3 cut(s) | 276, 1259, 1650 |
| AcyI | GRCGYC | 1 cut(s) | 1327 |
| AfaI | GTAC | 5 cut(s) | 157, 640, 647, 839, 1130 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 884 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1581 |
| AjnI | CCWGG | 2 cut(s) | 236, 1157 |
| Alw21I | GWGCWC | 2 cut(s) | 488, 2319 |
| Alw26I | GTCTC | 2 cut(s) | 1369, 1391 |
| Alw44I | GTGCAC | 1 cut(s) | 484 |
| AlwI | GGATC | 5 cut(s) | 869, 882, 2160, 2245, 2435 |
| Ama87I | CYCGRG | 1 cut(s) | 1223 |
| ApaLI | GTGCAC | 1 cut(s) | 484 |
| ApeKI | GCWGC | 5 cut(s) | 401, 698, 738, 944, 2414 |
| ApoI | RAATTY | 7 cut(s) | 32, 93, 114, 575, 956, 1472, 1997 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1749 |
| AspLEI | GCGC | 3 cut(s) | 1329, 2123, 2262 |
| AspS9I | GGNCC | 8 cut(s) | 137, 455, 815, 890, 921, 1726, 2141, 2169 |
| AsuC2I | CCSGG | 4 cut(s) | 250, 1224, 1225, 2255 |
| AsuHPI | GGTGA | 3 cut(s) | 1541, 1733, 2173 |
| AvaI | CYCGRG | 1 cut(s) | 1223 |
| AvaII | GGWCC | 4 cut(s) | 455, 890, 1726, 2141 |
| BaeGI | GKGCMC | 1 cut(s) | 488 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 622, 655 |
| BamHI | GGATCC | 1 cut(s) | 874 |
| BanI | GGYRCC | 2 cut(s) | 295, 1326 |
| BanII | GRGCYC | 2 cut(s) | 1652, 2319 |
| BbsI | GAAGAC | 2 cut(s) | 54, 225 |
| Bbv12I | GWGCWC | 2 cut(s) | 488, 2319 |
| BbvI | GCAGC | 5 cut(s) | 413, 710, 725, 956, 2401 |
| BccI | CCATC | 4 cut(s) | 146, 1544, 1574, 1879 |
| BceAI | ACGGC | 4 cut(s) | 1194, 1210, 1377, 1443 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 774, 808 |
| BciT130I | CCWGG | 2 cut(s) | 238, 1159 |
| BcnI | CCSGG | 4 cut(s) | 250, 1224, 1225, 2255 |
| BcoDI | GTCTC | 2 cut(s) | 1369, 1391 |
| BfaI | CTAG | 7 cut(s) | 207, 398, 665, 776, 1788, 2126, 2231 |
| BfmI | CTRYAG | 3 cut(s) | 634, 996, 1803 |
| BfoI | RGCGCY | 1 cut(s) | 1330 |
| BlpI | GCTNAGC | 1 cut(s) | 2226 |
| BmcAI | AGTACT | 1 cut(s) | 1130 |
| Bme1390I | CCNGG | 6 cut(s) | 238, 250, 1159, 1224, 1225, 2255 |
| Bme18I | GGWCC | 4 cut(s) | 455, 890, 1726, 2141 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1581 |
| BmeT110I | CYCGRG | 1 cut(s) | 1223 |
| BmgT120I | GGNCC | 8 cut(s) | 137, 455, 815, 890, 921, 1726, 2141, 2169 |
| BmiI | GGNNCC | 6 cut(s) | 297, 456, 876, 1156, 1328, 1407 |
| BmrFI | CCNGG | 6 cut(s) | 238, 250, 1159, 1224, 1225, 2255 |
| BmrI | ACTGGG | 1 cut(s) | 2419 |
| BmsI | GCATC | 6 cut(s) | 340, 580, 807, 994, 1010, 2200 |
| BmuI | ACTGGG | 1 cut(s) | 2419 |
| BpiI | GAAGAC | 2 cut(s) | 54, 225 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1766, 1798 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1337, 1813 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2226 |
| BpuEI | CTTGAG | 3 cut(s) | 585, 1162, 2303 |
| BpuMI | CCSGG | 4 cut(s) | 250, 1224, 1225, 2255 |
| BsaHI | GRCGYC | 1 cut(s) | 1327 |
| BsaJI | CCNNGG | 8 cut(s) | 27, 237, 780, 1158, 1223, 1224, 1519, 1953 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2249, 2279 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 884 |
| Bse1I | ACTGG | 5 cut(s) | 677, 802, 889, 2119, 2414 |
| Bse3DI | GCAATG | 2 cut(s) | 1876, 2394 |
| BseBI | CCWGG | 2 cut(s) | 238, 1159 |
| BseDI | CCNNGG | 8 cut(s) | 27, 237, 780, 1158, 1223, 1224, 1519, 1953 |
| BseGI | GGATG | 2 cut(s) | 798, 906 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 884 |
| BseMI | GCAATG | 2 cut(s) | 1876, 2394 |
| BseMII | CTCAG | 5 cut(s) | 51, 1351, 1374, 1402, 2217 |
| BseNI | ACTGG | 5 cut(s) | 677, 802, 889, 2119, 2414 |
| BseRI | GAGGAG | 1 cut(s) | 150 |
| BseSI | GKGCMC | 1 cut(s) | 488 |
| BseX3I | CGGCCG | 2 cut(s) | 1890, 1911 |
| BseXI | GCAGC | 5 cut(s) | 413, 710, 725, 956, 2401 |
| BseYI | CCCAGC | 1 cut(s) | 451 |
| Bsh1236I | CGCG | 2 cut(s) | 2121, 2174 |
| Bsh1285I | CGRYCG | 4 cut(s) | 1771, 1893, 1914, 2032 |
| BshNI | GGYRCC | 2 cut(s) | 295, 1326 |
| BsiEI | CGRYCG | 4 cut(s) | 1771, 1893, 1914, 2032 |
| BsiHKAI | GWGCWC | 2 cut(s) | 488, 2319 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1223 |
| BsiSI | CCGG | 3 cut(s) | 250, 1224, 2254 |
| BslFI | GGGAC | 3 cut(s) | 2010, 2123, 2357 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 884 |
| BsmAI | GTCTC | 2 cut(s) | 1369, 1391 |
| BsmBI | CGTCTC | 1 cut(s) | 1391 |
| BsmFI | GGGAC | 3 cut(s) | 2010, 2123, 2357 |
| BsoBI | CYCGRG | 1 cut(s) | 1223 |
| Bsp1286I | GDGCHC | 3 cut(s) | 488, 1652, 2319 |
| Bsp1407I | TGTACA | 2 cut(s) | 645, 837 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2226 |
| Bsp19I | CCATGG | 1 cut(s) | 27 |
| BspCNI | CTCAG | 5 cut(s) | 50, 1350, 1373, 1401, 2218 |
| BspFNI | CGCG | 2 cut(s) | 2121, 2174 |
| BspHI | TCATGA | 1 cut(s) | 2308 |
| BspLI | GGNNCC | 6 cut(s) | 297, 456, 876, 1156, 1328, 1407 |
| BspMAI | CTGCAG | 1 cut(s) | 1807 |
| BspPI | GGATC | 5 cut(s) | 869, 882, 2160, 2245, 2435 |
| BspQI | GCTCTTC | 2 cut(s) | 1535, 2307 |
| BspT107I | GGYRCC | 2 cut(s) | 295, 1326 |
| BsrDI | GCAATG | 2 cut(s) | 1876, 2394 |
| BsrGI | TGTACA | 2 cut(s) | 645, 837 |
| BsrI | ACTGG | 5 cut(s) | 677, 802, 889, 2119, 2414 |
| BssECI | CCNNGG | 8 cut(s) | 27, 237, 780, 1158, 1223, 1224, 1519, 1953 |
| BssNI | GRCGYC | 1 cut(s) | 1327 |
| BssT1I | CCWWGG | 2 cut(s) | 27, 1519 |
| Bst2UI | CCWGG | 2 cut(s) | 238, 1159 |
| Bst4CI | ACNGT | 3 cut(s) | 1500, 1954, 2033 |
| Bst6I | CTCTTC | 3 cut(s) | 1535, 1789, 2307 |
| BstACI | GRCGYC | 1 cut(s) | 1327 |
| BstAUI | TGTACA | 2 cut(s) | 645, 837 |
| BstC8I | GCNNGC | 7 cut(s) | 563, 567, 696, 921, 1648, 1701, 1833 |
| BstDSI | CCRYGG | 2 cut(s) | 27, 1953 |
| BstF5I | GGATG | 2 cut(s) | 798, 906 |
| BstFNI | CGCG | 2 cut(s) | 2121, 2174 |
| BstH2I | RGCGCY | 1 cut(s) | 1330 |
| BstHHI | GCGC | 3 cut(s) | 1329, 2123, 2262 |
| BstMAI | GTCTC | 2 cut(s) | 1369, 1391 |
| BstMCI | CGRYCG | 4 cut(s) | 1771, 1893, 1914, 2032 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 367, 776, 1103, 1333, 1342, 1837, 2279, 2411 |
| BstNI | CCWGG | 2 cut(s) | 238, 1159 |
| BstNSI | RCATGY | 4 cut(s) | 698, 1932, 2096, 2266 |
| BstSCI | CCNGG | 6 cut(s) | 236, 248, 1157, 1222, 1223, 2253 |
| BstSFI | CTRYAG | 3 cut(s) | 634, 996, 1803 |
| BstSLI | GKGCMC | 1 cut(s) | 488 |
| BstUI | CGCG | 2 cut(s) | 2121, 2174 |
| BstV1I | GCAGC | 5 cut(s) | 413, 710, 725, 956, 2401 |
| BstV2I | GAAGAC | 2 cut(s) | 54, 225 |
| BstX2I | RGATCY | 2 cut(s) | 874, 2427 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1526 |
| BstYI | RGATCY | 2 cut(s) | 874, 2427 |
| BstZI | CGGCCG | 2 cut(s) | 1890, 1911 |
| BtgI | CCRYGG | 2 cut(s) | 27, 1953 |
| BtsCI | GGATG | 2 cut(s) | 798, 906 |
| BtsIMutI | CAGTG | 5 cut(s) | 529, 882, 1023, 2080, 2112 |
| Cac8I | GCNNGC | 7 cut(s) | 563, 567, 696, 921, 1648, 1701, 1833 |
| CciI | TCATGA | 1 cut(s) | 2308 |
| CfoI | GCGC | 3 cut(s) | 1329, 2123, 2262 |
| Cfr13I | GGNCC | 8 cut(s) | 137, 455, 815, 890, 921, 1726, 2141, 2169 |
| Cfr9I | CCCGGG | 1 cut(s) | 1223 |
| CseI | GACGC | 3 cut(s) | 332, 1351, 2411 |
| Csp6I | GTAC | 5 cut(s) | 156, 639, 646, 838, 1129 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 868, 903 |
| CviQI | GTAC | 5 cut(s) | 156, 639, 646, 838, 1129 |
| DinI | GGCGCC | 1 cut(s) | 1328 |
| DraI | TTTAAA | 3 cut(s) | 1060, 1296, 1491 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1581 |
| EaeI | YGGCCR | 5 cut(s) | 263, 1666, 1890, 1911, 2116 |
| EagI | CGGCCG | 2 cut(s) | 1890, 1911 |
| Eam1104I | CTCTTC | 3 cut(s) | 1535, 1789, 2307 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1581 |
| EarI | CTCTTC | 3 cut(s) | 1535, 1789, 2307 |
| EciI | GGCGGA | 1 cut(s) | 346 |
| Ecl136II | GAGCTC | 1 cut(s) | 2317 |
| EclXI | CGGCCG | 2 cut(s) | 1890, 1911 |
| Eco130I | CCWWGG | 2 cut(s) | 27, 1519 |
| Eco147I | AGGCCT | 1 cut(s) | 1811 |
| Eco24I | GRGCYC | 2 cut(s) | 1652, 2319 |
| Eco32I | GATATC | 1 cut(s) | 1534 |
| Eco47I | GGWCC | 4 cut(s) | 455, 890, 1726, 2141 |
| Eco52I | CGGCCG | 2 cut(s) | 1890, 1911 |
| Eco53kI | GAGCTC | 1 cut(s) | 2317 |
| Eco57I | CTGAAG | 3 cut(s) | 276, 1259, 1650 |
| Eco88I | CYCGRG | 1 cut(s) | 1223 |
| EcoICRI | GAGCTC | 1 cut(s) | 2317 |
| EcoO109I | RGGNCCY | 2 cut(s) | 137, 455 |
| EcoRI | GAATTC | 1 cut(s) | 32 |
| EcoRII | CCWGG | 2 cut(s) | 236, 1157 |
| EcoRV | GATATC | 1 cut(s) | 1534 |
| EcoT14I | CCWWGG | 2 cut(s) | 27, 1519 |
| EcoT22I | ATGCAT | 1 cut(s) | 2337 |
| EcoT38I | GRGCYC | 2 cut(s) | 1652, 2319 |
| EgeI | GGCGCC | 1 cut(s) | 1328 |
| EheI | GGCGCC | 1 cut(s) | 1328 |
| ErhI | CCWWGG | 2 cut(s) | 27, 1519 |
| Esp3I | CGTCTC | 1 cut(s) | 1391 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1082, 1114, 1224, 1256 |
| FaqI | GGGAC | 3 cut(s) | 2010, 2123, 2357 |
| FauI | CCCGC | 3 cut(s) | 100, 912, 1639 |
| FauNDI | CATATG | 1 cut(s) | 1011 |
| FokI | GGATG | 2 cut(s) | 785, 913 |
| FriOI | GRGCYC | 2 cut(s) | 1652, 2319 |
| FspBI | CTAG | 7 cut(s) | 207, 398, 665, 776, 1788, 2126, 2231 |
| GlaI | GCGC | 3 cut(s) | 1328, 2122, 2261 |
| GsaI | CCCAGC | 1 cut(s) | 455 |
| HaeII | RGCGCY | 1 cut(s) | 1330 |
| HapII | CCGG | 3 cut(s) | 250, 1224, 2254 |
| HgaI | GACGC | 3 cut(s) | 332, 1351, 2411 |
| HhaI | GCGC | 3 cut(s) | 1329, 2123, 2262 |
| Hin1I | GRCGYC | 1 cut(s) | 1327 |
| Hin6I | GCGC | 3 cut(s) | 1327, 2121, 2260 |
| HinP1I | GCGC | 3 cut(s) | 1327, 2121, 2260 |
| HincII | GTYRAC | 3 cut(s) | 543, 1480, 1960 |
| HindII | GTYRAC | 3 cut(s) | 543, 1480, 1960 |
| HindIII | AAGCTT | 1 cut(s) | 54 |
| HinfI | GANTC | 9 cut(s) | 177, 463, 529, 1118, 1269, 1309, 1358, 1745, 2236 |
| HpaII | CCGG | 3 cut(s) | 250, 1224, 2254 |
| HphI | GGTGA | 3 cut(s) | 1541, 1733, 2173 |
| Hpy166II | GTNNAC | 7 cut(s) | 486, 543, 890, 1480, 1503, 1960, 2268 |
| Hpy188I | TCNGA | 9 cut(s) | 40, 199, 512, 1123, 1138, 1278, 1459, 1630, 1654 |
| Hpy8I | GTNNAC | 7 cut(s) | 486, 543, 890, 1480, 1503, 1960, 2268 |
| Hpy99I | CGWCG | 1 cut(s) | 1374 |
| HpyAV | CCTTC | 4 cut(s) | 251, 1084, 1283, 1828 |
| HpyCH4III | ACNGT | 3 cut(s) | 1500, 1954, 2033 |
| HpyCH4IV | ACGT | 2 cut(s) | 1372, 1384 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 367, 776, 1103, 1333, 1342, 1837, 2279, 2411 |
| HpySE526I | ACGT | 2 cut(s) | 1372, 1384 |
| Hsp92I | GRCGYC | 1 cut(s) | 1327 |
| HspAI | GCGC | 3 cut(s) | 1327, 2121, 2260 |
| KasI | GGCGCC | 1 cut(s) | 1326 |
| LguI | GCTCTTC | 2 cut(s) | 1535, 2307 |
| LmnI | GCTCC | 4 cut(s) | 367, 574, 1405, 2257 |
| Lsp1109I | GCAGC | 5 cut(s) | 413, 710, 725, 956, 2401 |
| LweI | GCATC | 6 cut(s) | 340, 580, 807, 994, 1010, 2200 |
| MaeI | CTAG | 7 cut(s) | 207, 398, 665, 776, 1788, 2126, 2231 |
| MaeII | ACGT | 2 cut(s) | 1372, 1384 |
| MaeIII | GTNAC | 6 cut(s) | 209, 624, 1355, 1373, 1921, 2062 |
| MflI | RGATCY | 2 cut(s) | 874, 2427 |
| MhlI | GDGCHC | 3 cut(s) | 488, 1652, 2319 |
| Mly113I | GGCGCC | 1 cut(s) | 1327 |
| MlyI | GAGTC | 4 cut(s) | 186, 472, 1352, 2245 |
| MmeI | TCCRAC | 4 cut(s) | 244, 490, 931, 1622 |
| Mph1103I | ATGCAT | 1 cut(s) | 2337 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1749 |
| MseI | TTAA | 7 cut(s) | 357, 1059, 1295, 1446, 1490, 1682, 1736 |
| MspA1I | CMGCKG | 3 cut(s) | 404, 451, 1510 |
| MspI | CCGG | 3 cut(s) | 250, 1224, 2254 |
| MspR9I | CCNGG | 6 cut(s) | 238, 250, 1159, 1224, 1225, 2255 |
| MvaI | CCWGG | 2 cut(s) | 238, 1159 |
| MvnI | CGCG | 2 cut(s) | 2121, 2174 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 367, 776, 1103, 1333, 1342, 1837, 2279, 2411 |
| NarI | GGCGCC | 1 cut(s) | 1327 |
| NciI | CCSGG | 4 cut(s) | 250, 1224, 1225, 2255 |
| NcoI | CCATGG | 1 cut(s) | 27 |
| NdeI | CATATG | 1 cut(s) | 1011 |
| NlaIV | GGNNCC | 6 cut(s) | 297, 456, 876, 1156, 1328, 1407 |
| NmeAIII | GCCGAG | 2 cut(s) | 805, 1939 |
| NmuCI | GTSAC | 3 cut(s) | 209, 624, 1355 |
| NsiI | ATGCAT | 1 cut(s) | 2337 |
| NspI | RCATGY | 4 cut(s) | 698, 1932, 2096, 2266 |
| PaeI | GCATGC | 1 cut(s) | 698 |
| PagI | TCATGA | 1 cut(s) | 2308 |
| PceI | AGGCCT | 1 cut(s) | 1811 |
| PciSI | GCTCTTC | 2 cut(s) | 1535, 2307 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1390 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1749 |
| PfeI | GAWTC | 5 cut(s) | 529, 1118, 1269, 1309, 1745 |
| PflFI | GACNNNGTC | 3 cut(s) | 377, 753, 1361 |
| PfoI | TCCNGGA | 1 cut(s) | 2253 |
| Ple19I | CGATCG | 1 cut(s) | 1771 |
| PleI | GAGTC | 4 cut(s) | 185, 471, 1352, 2244 |
| PluTI | GGCGCC | 1 cut(s) | 1330 |
| PpsI | GAGTC | 4 cut(s) | 185, 471, 1352, 2244 |
| PpuMI | RGGWCCY | 1 cut(s) | 455 |
| Psp124BI | GAGCTC | 1 cut(s) | 2319 |
| Psp5II | RGGWCCY | 1 cut(s) | 455 |
| Psp6I | CCWGG | 2 cut(s) | 236, 1157 |
| PspFI | CCCAGC | 1 cut(s) | 451 |
| PspGI | CCWGG | 2 cut(s) | 236, 1157 |
| PspN4I | GGNNCC | 6 cut(s) | 297, 456, 876, 1156, 1328, 1407 |
| PspPI | GGNCC | 8 cut(s) | 137, 455, 815, 890, 921, 1726, 2141, 2169 |
| PspPPI | RGGWCCY | 1 cut(s) | 455 |
| PstI | CTGCAG | 1 cut(s) | 1807 |
| PsuI | RGATCY | 2 cut(s) | 874, 2427 |
| PsyI | GACNNNGTC | 3 cut(s) | 377, 753, 1361 |
| PvuI | CGATCG | 1 cut(s) | 1771 |
| RsaI | GTAC | 5 cut(s) | 157, 640, 647, 839, 1130 |
| RsaNI | GTAC | 5 cut(s) | 156, 639, 646, 838, 1129 |
| SacI | GAGCTC | 1 cut(s) | 2319 |
| SapI | GCTCTTC | 2 cut(s) | 1535, 2307 |
| SaqAI | TTAA | 7 cut(s) | 357, 1059, 1295, 1446, 1490, 1682, 1736 |
| Sau96I | GGNCC | 8 cut(s) | 137, 455, 815, 890, 921, 1726, 2141, 2169 |
| ScaI | AGTACT | 1 cut(s) | 1130 |
| SchI | GAGTC | 4 cut(s) | 186, 472, 1352, 2245 |
| ScrFI | CCNGG | 6 cut(s) | 238, 250, 1159, 1224, 1225, 2255 |
| SduI | GDGCHC | 3 cut(s) | 488, 1652, 2319 |
| SfaNI | GCATC | 6 cut(s) | 340, 580, 807, 994, 1010, 2200 |
| SfcI | CTRYAG | 3 cut(s) | 634, 996, 1803 |
| SfoI | GGCGCC | 1 cut(s) | 1328 |
| SinI | GGWCC | 4 cut(s) | 455, 890, 1726, 2141 |
| SmaI | CCCGGG | 1 cut(s) | 1225 |
| SmlI | CTYRAG | 3 cut(s) | 600, 1177, 2318 |
| SmoI | CTYRAG | 3 cut(s) | 600, 1177, 2318 |
| SphI | GCATGC | 1 cut(s) | 698 |
| SseBI | AGGCCT | 1 cut(s) | 1811 |
| SspDI | GGCGCC | 1 cut(s) | 1326 |
| SspI | AATATT | 1 cut(s) | 1637 |
| SspMI | CTAG | 7 cut(s) | 207, 398, 665, 776, 1788, 2126, 2231 |
| SstI | GAGCTC | 1 cut(s) | 2319 |
| StuI | AGGCCT | 1 cut(s) | 1811 |
| StyD4I | CCNGG | 6 cut(s) | 236, 248, 1157, 1222, 1223, 2253 |
| StyI | CCWWGG | 2 cut(s) | 27, 1519 |
| TaaI | ACNGT | 3 cut(s) | 1500, 1954, 2033 |
| TaiI | ACGT | 2 cut(s) | 1375, 1387 |
| TaqI | TCGA | 3 cut(s) | 748, 1876, 2239 |
| TaqII | GACCGA | 1 cut(s) | 1999 |
| TatI | WGTACW | 3 cut(s) | 645, 837, 1128 |
| TfiI | GAWTC | 5 cut(s) | 529, 1118, 1269, 1309, 1745 |
| Tru1I | TTAA | 7 cut(s) | 357, 1059, 1295, 1446, 1490, 1682, 1736 |
| Tru9I | TTAA | 7 cut(s) | 357, 1059, 1295, 1446, 1490, 1682, 1736 |
| TscAI | CASTG | 5 cut(s) | 529, 889, 1023, 2080, 2119 |
| TseFI | GTSAC | 3 cut(s) | 209, 624, 1355 |
| TseI | GCWGC | 5 cut(s) | 401, 698, 738, 944, 2414 |
| Tsp45I | GTSAC | 3 cut(s) | 209, 624, 1355 |
| TspDTI | ATGAA | 8 cut(s) | 455, 1058, 1311, 1742, 1758, 2325, 2397, 2405 |
| TspGWI | ACGGA | 2 cut(s) | 290, 380 |
| TspMI | CCCGGG | 1 cut(s) | 1223 |
| TspRI | CASTG | 5 cut(s) | 529, 889, 1023, 2080, 2119 |
| Tth111I | GACNNNGTC | 3 cut(s) | 377, 753, 1361 |
| VneI | GTGCAC | 1 cut(s) | 484 |
| VpaK11BI | GGWCC | 4 cut(s) | 455, 890, 1726, 2141 |
| XapI | RAATTY | 7 cut(s) | 32, 93, 114, 575, 956, 1472, 1997 |
| XbaI | TCTAGA | 2 cut(s) | 1787, 2125 |
| XceI | RCATGY | 4 cut(s) | 698, 1932, 2096, 2266 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 809 |
| XmaI | CCCGGG | 1 cut(s) | 1223 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1749 |
| XspI | CTAG | 7 cut(s) | 207, 398, 665, 776, 1788, 2126, 2231 |
| ZrmI | AGTACT | 1 cut(s) | 1130 |
| Zsp2I | ATGCAT | 1 cut(s) | 2337 |