pycom04g06720

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
OG0000063
Physical Location & Seq
Reverse (-)
6949218 .. 6950338
1121 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g06720.1

Sequence Viewer

Length: 1074 bp
ATGGCCTCCTTCATTTCAAAACTTTCTGATGAGATCAACAAGTGCAAGGATTTCATCGATCGGAGCGCCGTCAAGACGCTACGATTTGAAGAAGACATGGCCACGACCCACCAAATTCTGGGTCCCCTCTTCAAAGACGCAGTGCCGTCGTCTGTCACTAACCTGCTCAAGGAGCAGTGCTTGAAACCCCTGCTGCAGGGGTTCGACTGGTCAAAGTGGACTCTGGCGCGGCCTCAGGGAGCCTGGCCCTCGACCACCGCGGCTTGGGCTGCCTGGGTCGACCGGATGAGCACATTCTTCTCCAAGGAATGGAAGGCTTTAGGTATCTATGATGCCATCATCCTGTCGACCATGGAGGTCGCCATGGATAAGGAGCTGCTTATGGCAGCCCTGAGTCTATGGTGTTCGGCCACCAACACCATGGTCCTGCCTTTCGGCCCACTCGGCCCCAAAATCCTTGACGTCTCGGCCATCCTTGGGACTTCCCCGACCGGCCTTCCTATTGACGCTGCCCTTTCCGGATACCCTTCTCCTCTCGACCTGAAGGCACTATTCGACGAAAGGGCCGTCGAGACGCTAAGCCGGGACGACCGGGAGCCCTCAAGGGAAGAAGTTCAGAAGCTGCACAAGAACTTCTTCAACTACAACACTCTCATTCTTCACTTCGCCGGCCGAGGCGAAGAAGGTCTTAGGAAGGGAGAGCACGAGGCCTTCCTCTTCTACTGGTACAACAAATTCATCTGTTGTACCAGGTCAAATAAATGCCTGGTGGAGAATATGCCGGTGGCCCAGGCACTGGCTAATGGTCGCTCGCTGGCGCTCAGTCCAGCCATACTCGCCAACCTCTACCGCTGCCTGGCCGAGGCGACCATTGGCAAGATTGACCCGCACCAGAACGGACCCCTCTGGGTGTTCCAACTCTGGTTGCAGGTTTACTTCTCCACCCTTCGACCGGAGGTTCCTGCCTTCCAACGAACGGCCGCCCTCGGCCTTCAACTGGCCTCTCGACCAGCGCCACCTCACCGAGCAGCCGAGGTTTTCAAACACTTCCTCAGAGTACCCATCCTCGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans Pkinase cNMP_binding

Protein Analysis

358

Amino Acids

39.98

Weight (kDa)

8.1

Isoelectric Point (pI)

44.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 108 - 322 1.5e-33 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000063)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21382 FvH4_1g29794 FvH4_1g29795 FvH4_2g35573 FvH4_2g35574 FvH4_4g18552 FvH4_5g16044
malus_domestica MD05G1017000.v1.1
prunus_persica Prupe.3G140800_v2.0.a1 Prupe.6G164100_v2.0.a1
pyrus_communis pycom01g04330 pycom03g19820 pycom04g06720 pycom06g11360 pycom06g19000 pycom10g08100 pycom13g16660 pycom13g27590 pycom13g27640 pycom13g27890 pycom16g11770 pycom16g19530
rosa_chinensis RchiOBHm_Chr1g0317341 RchiOBHm_Chr1g0317351 RchiOBHm_Chr1g0320431 RchiOBHm_Chr1g0320711 RchiOBHm_Chr1g0320721 RchiOBHm_Chr1g0321611 RchiOBHm_Chr1g0321621 RchiOBHm_Chr1g0321631 RchiOBHm_Chr1g0323651 RchiOBHm_Chr1g0332991 RchiOBHm_Chr1g0333001 RchiOBHm_Chr1g0335981 RchiOBHm_Chr1g0335991 RchiOBHm_Chr1g0336001 RchiOBHm_Chr1g0350201 RchiOBHm_Chr1g0368201 RchiOBHm_Chr2g0105531 RchiOBHm_Chr2g0105541 RchiOBHm_Chr2g0116571 RchiOBHm_Chr2g0116581 RchiOBHm_Chr2g0121071 RchiOBHm_Chr2g0131351 RchiOBHm_Chr2g0131661 RchiOBHm_Chr2g0133021 RchiOBHm_Chr2g0138181 RchiOBHm_Chr2g0138191 RchiOBHm_Chr2g0142701 RchiOBHm_Chr2g0142711 RchiOBHm_Chr2g0152981 RchiOBHm_Chr3g0456181 RchiOBHm_Chr3g0456191 RchiOBHm_Chr3g0493631 RchiOBHm_Chr3g0496201 RchiOBHm_Chr4g0401541 RchiOBHm_Chr4g0410311 RchiOBHm_Chr4g0410321 RchiOBHm_Chr4g0419231 RchiOBHm_Chr4g0419511 RchiOBHm_Chr4g0419521 RchiOBHm_Chr5g0004311 RchiOBHm_Chr5g0004321 RchiOBHm_Chr5g0038131 RchiOBHm_Chr5g0038251 RchiOBHm_Chr5g0038261 RchiOBHm_Chr5g0038271 RchiOBHm_Chr5g0052241 RchiOBHm_Chr5g0053911 RchiOBHm_Chr5g0074641 RchiOBHm_Chr5g0076651 RchiOBHm_Chr5g0076661 RchiOBHm_Chr6g0249161 RchiOBHm_Chr6g0249171 RchiOBHm_Chr6g0250961 RchiOBHm_Chr6g0253701 RchiOBHm_Chr6g0262131 RchiOBHm_Chr6g0263181 RchiOBHm_Chr6g0263231 RchiOBHm_Chr6g0263241 RchiOBHm_Chr6g0263251 RchiOBHm_Chr6g0291271 RchiOBHm_Chr7g0194611 RchiOBHm_Chr7g0219691 RchiOBHm_Chr7g0219701 RchiOBHm_Chr7g0225431 RchiOBHm_Chr7g0234221 RchiOBHm_Chr7g0238711 RchiOBHm_Chr7g0238721 RchiOBHm_Chr7g0238731 RchiOBHm_Chr7g0239611 RchiOBHm_Chr7g0239621
rosa_laevigata RLG00000001361 RLG00000001376 RLG00000001860 RLG00000002051 RLG00000002362 RLG00000008940 RLG00000012764 RLG00000018782 RLG00000029639 RLG00000030151
rosa_multiflora Rmu_co8090794.1_g000001 Rmu_co8135356.1_g000001 Rmu_co8224968.1_g000001 Rmu_sc0000016.1_g000020 Rmu_sc0000029.1_g000061 Rmu_sc0000035.1_g000032 Rmu_sc0000060.1_g000041 Rmu_sc0000148.1_g000041 Rmu_sc0000315.1_g000084 Rmu_sc0000527.1_g000005 Rmu_sc0000527.1_g000007 Rmu_sc0000527.1_g000008 Rmu_sc0000648.1_g000002 Rmu_sc0000762.1_g000076 Rmu_sc0000870.1_g000003 Rmu_sc0000870.1_g000004 Rmu_sc0000948.1_g000037 Rmu_sc0000997.1_g000003 Rmu_sc0001047.1_g000041 Rmu_sc0001047.1_g000042 Rmu_sc0001075.1_g000044 Rmu_sc0001174.1_g000006 Rmu_sc0001235.1_g000025 Rmu_sc0001292.1_g000008 Rmu_sc0001301.1_g000038 Rmu_sc0001461.1_g000069 Rmu_sc0001461.1_g000070 Rmu_sc0001669.1_g000041 Rmu_sc0001689.1_g000027 Rmu_sc0001896.1_g000008 Rmu_sc0001909.1_g000013 Rmu_sc0002170.1_g000038 Rmu_sc0002200.1_g000014 Rmu_sc0002283.1_g000027 Rmu_sc0002284.1_g000014 Rmu_sc0002294.1_g000017 Rmu_sc0002294.1_g000018 Rmu_sc0002307.1_g000020 Rmu_sc0002307.1_g000021 Rmu_sc0002307.1_g000023 Rmu_sc0002357.1_g000054 Rmu_sc0002409.1_g000005 Rmu_sc0002535.1_g000002 Rmu_sc0002589.1_g000014 Rmu_sc0002759.1_g000016 Rmu_sc0002759.1_g000017 Rmu_sc0002777.1_g000015 Rmu_sc0002824.1_g000016 Rmu_sc0002872.1_g000005 Rmu_sc0002872.1_g000012 Rmu_sc0002872.1_g000013 Rmu_sc0002942.1_g000019 Rmu_sc0003337.1_g000001 Rmu_sc0003410.1_g000052 Rmu_sc0003445.1_g000010 Rmu_sc0003773.1_g000007 Rmu_sc0003773.1_g000008 Rmu_sc0003895.1_g000002 Rmu_sc0004063.1_g000006 Rmu_sc0004088.1_g000009 Rmu_sc0004088.1_g000010 Rmu_sc0004174.1_g000027 Rmu_sc0004196.1_g000010 Rmu_sc0004515.1_g000006 Rmu_sc0004727.1_g000010 Rmu_sc0004755.1_g000018 Rmu_sc0005016.1_g000030 Rmu_sc0005026.1_g000001 Rmu_sc0005044.1_g000007 Rmu_sc0005284.1_g000001 Rmu_sc0005431.1_g000030 Rmu_sc0005802.1_g000014 Rmu_sc0005802.1_g000015 Rmu_sc0005994.1_g000004 Rmu_sc0005994.1_g000005 Rmu_sc0006059.1_g000048 Rmu_sc0006583.1_g000013 Rmu_sc0006824.1_g000009 Rmu_sc0007458.1_g000005 Rmu_sc0007707.1_g000002 Rmu_sc0008242.1_g000012 Rmu_sc0008713.1_g000006 Rmu_sc0008770.1_g000008 Rmu_sc0009785.1_g000004 Rmu_sc0009785.1_g000005 Rmu_sc0010125.1_g000001 Rmu_sc0010211.1_g000004 Rmu_sc0011034.1_g000001 Rmu_sc0011833.1_g000006 Rmu_sc0014851.1_g000001 Rmu_sc0014899.1_g000001 Rmu_sc0015060.1_g000003 Rmu_sc0015186.1_g000001 Rmu_sc0015248.1_g000003 Rmu_sc0015248.1_g000004 Rmu_sc0015314.1_g000001 Rmu_sc0018098.1_g000002 Rmu_sc0022706.1_g000004 Rmu_sc0023350.1_g000002 Rmu_sc0027636.1_g000001 Rmu_sc0027672.1_g000003 Rmu_sc0030879.1_g000001 Rmu_ssc0000008.1_g000029 Rmu_ssc0000019.1_g000014 Rmu_ssc0000050.1_g000082 Rmu_ssc0000282.1_g000004 Rmu_ssc0000311.1_g000010
rosa_roxburghii Rroxscaffold_1G00015190 Rroxscaffold_1G00031880 Rroxscaffold_1G00031890 Rroxscaffold_1G00059310 Rroxscaffold_1G00060420 Rroxscaffold_1G00067930 Rroxscaffold_1G00075030 Rroxscaffold_2G00082210 Rroxscaffold_2G00122970 Rroxscaffold_3G00218230 Rroxscaffold_3G00219020 Rroxscaffold_3G00219030 Rroxscaffold_3G00223680 Rroxscaffold_3G00223690 Rroxscaffold_3G00223700 Rroxscaffold_3G00226870 Rroxscaffold_3G00226880 Rroxscaffold_3G00232990 Rroxscaffold_3G00265610 Rroxscaffold_3G00265620 Rroxscaffold_3G00265630 Rroxscaffold_4G00318660 Rroxscaffold_4G00319060 Rroxscaffold_4G00323500 Rroxscaffold_5G00357520 Rroxscaffold_5G00366150 Rroxscaffold_5G00377470 Rroxscaffold_6G00395700 Rroxscaffold_6G00413950 Rroxscaffold_7G00187650 Rroxscaffold_7G00198290 Rroxscaffold_7G00198300 Rroxscaffold_7G00208060
rosa_rugosa Rorug01G0173900 Rorug01G0174000 Rorug01G0174100 Rorug01G0174100 Rorug02G0341200 Rorug04G0135700 Rorug04G0135800 Rorug05G0032500 Rorug06G0021800
rosa_samantha Rh1AG036600 Rh1AG245800 Rh1CG021700 Rh1CG021800 Rh1CG085800 Rh1CG085900 Rh1CG187900 Rh1CG229600 Rh1CG239600 Rh1CG246500 Rh1CG246600 Rh2BG478100 Rh2DG341300 Rh2DG366600 Rh2DG375700 Rh2DG384300 Rh2DG487000 Rh2DG504000 Rh2DG504100 Rh3AG311800 Rh3AG327500 Rh3AG328300 Rh3BG345100 Rh3CG320100 Rh4AG005700 Rh4AG067900 Rh4AG068000 Rh4AG084400 Rh4AG106700 Rh4AG160000 Rh4AG173900 Rh4AG174000 Rh4CG125300 Rh4CG125500 Rh4CG264500 Rh4DG110800 Rh5AG047300 Rh5AG085200 Rh5AG126300 Rh5AG127300 Rh5AG203000 Rh5AG332400 Rh5AG332500 Rh5AG342400 Rh5AG344100 Rh5AG375600 Rh5AG378300 Rh5AG386000 Rh5AG529600 Rh5BG125200 Rh5CG137600 Rh5CG137700 Rh5DG125200 Rh6BG134100 Rh6BG175400 Rh6BG179500 Rh6BG179600 Rh6BG181600 Rh6BG181700 Rh6BG191100 Rh6BG232900 Rh6BG259700 Rh6BG259800 Rh7AG028000 Rh7AG319400 Rh7AG352700 Rh7AG352800 Rh7AG352900 Rh7AG482500 Rh7AG482600 Rh7AG503800 Rh7BG334700 Rh7CG200100 Rh7CG336200 Rh7CG370200 Rh7CG370400 Rh7CG370500
rosa_wichuraiana Rw1G001580 Rw1G003570 Rw1G004260 Rw1G004270 Rw1G021170 Rw2G019390 Rw2G040280 Rw2G044050 Rw4G004430 Rw5G010950 Rw5G018350 Rw5G032890 Rw6G002840 Rw6G006510 Rw6G007780 Rw6G033790 Rw7G036320 Rw7G040550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 465
Acc36I ACCTGC 2 cut(s) 171, 919
AccB7I CCANNNNNTGG 3 cut(s) 118, 309, 796
AccI GTMKAC 2 cut(s) 279, 347
AccII CGCG 2 cut(s) 229, 260
AccIII TCCGGA 1 cut(s) 518
AciI CCGC 6 cut(s) 229, 258, 260, 850, 887, 981
AcoI YGGCCR 6 cut(s) 99, 408, 468, 670, 858, 978
AcsI RAATTY 2 cut(s) 114, 734
AcuI CTGAAG 1 cut(s) 563
AcyI GRCGYC 1 cut(s) 462
AfaI GTAC 3 cut(s) 728, 748, 1059
AgsI TTSAA 7 cut(s) 18, 89, 133, 184, 640, 995, 1042
AjnI CCWGG 6 cut(s) 242, 272, 749, 765, 789, 855
AluBI AGCT 2 cut(s) 376, 622
AluI AGCT 2 cut(s) 376, 622
Alw21I GWGCWC 2 cut(s) 293, 705
Alw26I GTCTC 2 cut(s) 469, 566
AlwNI CAGNNNCTG 2 cut(s) 622, 796
Aor13HI TCCGGA 1 cut(s) 518
ApeKI GCWGC 8 cut(s) 193, 269, 376, 386, 509, 622, 852, 1028
ApoI RAATTY 2 cut(s) 114, 734
ArsI GACNNNNNNTTYG 4 cut(s) 106, 138, 552, 584
Asp700I GAANNNNTTC 2 cut(s) 612, 635
AspLEI GCGC 4 cut(s) 68, 229, 820, 1015
AspS9I GGNCC 8 cut(s) 122, 246, 424, 437, 446, 564, 787, 899
AsuC2I CCSGG 2 cut(s) 584, 593
AsuHPI GGTGA 1 cut(s) 1013
AvaII GGWCC 3 cut(s) 122, 424, 899
AxyI CCTNAGG 1 cut(s) 234
BalI TGGCCA 1 cut(s) 101
BanII GRGCYC 1 cut(s) 600
BauI CACGAG 1 cut(s) 704
BbsI GAAGAC 1 cut(s) 99
Bbv12I GWGCWC 2 cut(s) 293, 705
BbvI GCAGC 8 cut(s) 180, 256, 363, 398, 496, 609, 839, 1040
BccI CCATC 3 cut(s) 344, 479, 1070
BceAI ACGGC 4 cut(s) 53, 130, 551, 993
BcgI CGANNNNNNTGC 2 cut(s) 129, 163
BciT130I CCWGG 6 cut(s) 244, 274, 751, 767, 791, 857
BciVI GTATCC 1 cut(s) 515
BcnI CCSGG 2 cut(s) 584, 593
BcoDI GTCTC 2 cut(s) 469, 566
BfmI CTRYAG 1 cut(s) 194
BfoI RGCGCY 3 cut(s) 69, 821, 1016
BfuAI ACCTGC 2 cut(s) 171, 919
BfuI GTATCC 1 cut(s) 515
BglI GCCNNNNNGGC 1 cut(s) 444
BlpI GCTNAGC 1 cut(s) 578
Bme1390I CCNGG 8 cut(s) 244, 274, 584, 593, 751, 767, 791, 857
Bme18I GGWCC 3 cut(s) 122, 424, 899
BmgT120I GGNCC 8 cut(s) 122, 246, 424, 437, 446, 564, 787, 899
BmiI GGNNCC 7 cut(s) 123, 124, 241, 448, 597, 901, 960
BmrFI CCNGG 8 cut(s) 244, 274, 584, 593, 751, 767, 791, 857
BmsI GCATC 1 cut(s) 322
BpiI GAAGAC 1 cut(s) 99
Bpu1102I GCTNAGC 1 cut(s) 578
BpuEI CTTGAG 2 cut(s) 152, 586
BpuMI CCSGG 2 cut(s) 584, 593
Bsa29I ATCGAT 1 cut(s) 57
BsaHI GRCGYC 1 cut(s) 462
BsaWI WCCGGW 3 cut(s) 282, 518, 952
Bse118I RCCGGY 3 cut(s) 491, 668, 781
Bse1I ACTGG 4 cut(s) 212, 728, 801, 1002
Bse21I CCTNAGG 1 cut(s) 234
BseAI TCCGGA 1 cut(s) 518
BseBI CCWGG 6 cut(s) 244, 274, 751, 767, 791, 857
BseCI ATCGAT 1 cut(s) 57
BseGI GGATG 4 cut(s) 291, 339, 471, 1062
BseMII CTCAG 4 cut(s) 248, 383, 835, 1066
BseNI ACTGG 4 cut(s) 212, 728, 801, 1002
BseRI GAGGAG 1 cut(s) 522
BseX3I CGGCCG 2 cut(s) 670, 978
BseXI GCAGC 8 cut(s) 180, 256, 363, 398, 496, 609, 839, 1040
BsgI GTGCAG 1 cut(s) 608
Bsh1236I CGCG 2 cut(s) 229, 260
Bsh1285I CGRYCG 7 cut(s) 61, 283, 492, 592, 673, 953, 981
BshVI ATCGAT 1 cut(s) 57
BsiEI CGRYCG 7 cut(s) 61, 283, 492, 592, 673, 953, 981
BsiHKAI GWGCWC 2 cut(s) 293, 705
BsiSI CCGG 8 cut(s) 283, 492, 519, 583, 592, 669, 782, 953
BslFI GGGAC 3 cut(s) 108, 493, 599
BsmAI GTCTC 2 cut(s) 469, 566
BsmBI CGTCTC 2 cut(s) 469, 566
BsmFI GGGAC 3 cut(s) 108, 493, 599
Bsp1286I GDGCHC 3 cut(s) 293, 600, 705
Bsp13I TCCGGA 1 cut(s) 518
Bsp143I GATC 2 cut(s) 33, 58
Bsp1720I GCTNAGC 1 cut(s) 578
Bsp19I CCATGG 3 cut(s) 351, 363, 420
BspACI CCGC 6 cut(s) 229, 258, 260, 850, 887, 981
BspCNI CTCAG 4 cut(s) 247, 384, 834, 1065
BspDI ATCGAT 1 cut(s) 57
BspEI TCCGGA 1 cut(s) 518
BspFNI CGCG 2 cut(s) 229, 260
BspLI GGNNCC 7 cut(s) 123, 124, 241, 448, 597, 901, 960
BspMAI CTGCAG 1 cut(s) 198
BspMI ACCTGC 2 cut(s) 171, 919
BsrFI RCCGGY 3 cut(s) 491, 668, 781
BsrI ACTGG 4 cut(s) 212, 728, 801, 1002
BssAI RCCGGY 3 cut(s) 491, 668, 781
BssMI GATC 2 cut(s) 33, 58
BssNI GRCGYC 1 cut(s) 462
BssSI CACGAG 1 cut(s) 704
BssT1I CCWWGG 5 cut(s) 303, 351, 363, 420, 475
Bst2BI CACGAG 1 cut(s) 704
Bst2UI CCWGG 6 cut(s) 244, 274, 751, 767, 791, 857
Bst6I CTCTTC 2 cut(s) 134, 722
BstACI GRCGYC 1 cut(s) 462
BstC8I GCNNGC 3 cut(s) 670, 812, 816
BstDEI CTNAG 7 cut(s) 234, 392, 578, 689, 821, 1052, 1071
BstDSI CCRYGG 4 cut(s) 258, 351, 363, 420
BstENI CCTNNNNNAGG 3 cut(s) 167, 194, 860
BstF5I GGATG 4 cut(s) 291, 339, 471, 1062
BstFNI CGCG 2 cut(s) 229, 260
BstH2I RGCGCY 3 cut(s) 69, 821, 1016
BstHHI GCGC 4 cut(s) 68, 229, 820, 1015
BstKTI GATC 2 cut(s) 36, 61
BstMAI GTCTC 2 cut(s) 469, 566
BstMBI GATC 2 cut(s) 33, 58
BstMCI CGRYCG 7 cut(s) 61, 283, 492, 592, 673, 953, 981
BstMWI GCNNNNNNNGC 5 cut(s) 172, 266, 269, 444, 836
BstNI CCWGG 6 cut(s) 244, 274, 751, 767, 791, 857
BstSCI CCNGG 8 cut(s) 242, 272, 582, 591, 749, 765, 789, 855
BstSFI CTRYAG 1 cut(s) 194
BstUI CGCG 2 cut(s) 229, 260
BstV1I GCAGC 8 cut(s) 180, 256, 363, 398, 496, 609, 839, 1040
BstV2I GAAGAC 1 cut(s) 99
BstXI CCANNNNNNTGG 1 cut(s) 421
BstZI CGGCCG 2 cut(s) 670, 978
Bsu15I ATCGAT 1 cut(s) 57
Bsu36I CCTNAGG 1 cut(s) 234
BsuI GTATCC 1 cut(s) 515
BsuTUI ATCGAT 1 cut(s) 57
BtgI CCRYGG 4 cut(s) 258, 351, 363, 420
BtsCI GGATG 4 cut(s) 291, 339, 471, 1062
BtsI GCAGTG 2 cut(s) 147, 182
BtsIMutI CAGTG 3 cut(s) 147, 182, 794
BveI ACCTGC 2 cut(s) 171, 919
Cac8I GCNNGC 3 cut(s) 670, 812, 816
CaiI CAGNNNCTG 2 cut(s) 622, 796
CfoI GCGC 4 cut(s) 68, 229, 820, 1015
Cfr10I RCCGGY 3 cut(s) 491, 668, 781
Cfr13I GGNCC 8 cut(s) 122, 246, 424, 437, 446, 564, 787, 899
Cfr42I CCGCGG 1 cut(s) 261
ClaI ATCGAT 1 cut(s) 57
CseI GACGC 4 cut(s) 85, 146, 515, 583
CsiI ACCWGGT 1 cut(s) 749
Csp6I GTAC 3 cut(s) 727, 747, 1058
CviAII CATG 4 cut(s) 97, 352, 364, 421
CviQI GTAC 3 cut(s) 727, 747, 1058
DdeI CTNAG 7 cut(s) 234, 392, 578, 689, 821, 1052, 1071
DpnI GATC 2 cut(s) 35, 60
DpnII GATC 2 cut(s) 33, 58
EaeI YGGCCR 6 cut(s) 99, 408, 468, 670, 858, 978
EagI CGGCCG 2 cut(s) 670, 978
Eam1104I CTCTTC 2 cut(s) 134, 722
EarI CTCTTC 2 cut(s) 134, 722
EclXI CGGCCG 2 cut(s) 670, 978
Eco130I CCWWGG 5 cut(s) 303, 351, 363, 420, 475
Eco147I AGGCCT 1 cut(s) 710
Eco24I GRGCYC 1 cut(s) 600
Eco47I GGWCC 3 cut(s) 122, 424, 899
Eco52I CGGCCG 2 cut(s) 670, 978
Eco57I CTGAAG 1 cut(s) 563
Eco81I CCTNAGG 1 cut(s) 234
EcoNI CCTNNNNNAGG 3 cut(s) 167, 194, 860
EcoO109I RGGNCCY 1 cut(s) 122
EcoRII CCWGG 6 cut(s) 242, 272, 749, 765, 789, 855
EcoT14I CCWWGG 5 cut(s) 303, 351, 363, 420, 475
EcoT38I GRGCYC 1 cut(s) 600
ErhI CCWWGG 5 cut(s) 303, 351, 363, 420, 475
Esp3I CGTCTC 2 cut(s) 469, 566
FaeI CATG 4 cut(s) 100, 355, 367, 424
FaiI YATR 9 cut(s) 98, 330, 353, 365, 383, 400, 422, 779, 833
FalI AAGNNNNNCTT 4 cut(s) 620, 652, 672, 704
FaqI GGGAC 3 cut(s) 108, 493, 599
FatI CATG 4 cut(s) 96, 351, 363, 420
FauI CCCGC 1 cut(s) 894
FblI GTMKAC 2 cut(s) 279, 347
FokI GGATG 4 cut(s) 298, 326, 458, 1049
FriOI GRGCYC 1 cut(s) 600
GlaI GCGC 4 cut(s) 67, 228, 819, 1014
HaeII RGCGCY 3 cut(s) 69, 821, 1016
HapII CCGG 8 cut(s) 283, 492, 519, 583, 592, 669, 782, 953
HgaI GACGC 4 cut(s) 85, 146, 515, 583
HhaI GCGC 4 cut(s) 68, 229, 820, 1015
Hin1I GRCGYC 1 cut(s) 462
Hin1II CATG 4 cut(s) 100, 355, 367, 424
Hin6I GCGC 4 cut(s) 66, 227, 818, 1013
HinP1I GCGC 4 cut(s) 66, 227, 818, 1013
HincII GTYRAC 2 cut(s) 280, 348
HindII GTYRAC 2 cut(s) 280, 348
HinfI GANTC 2 cut(s) 220, 394
HpaII CCGG 8 cut(s) 283, 492, 519, 583, 592, 669, 782, 953
HphI GGTGA 1 cut(s) 1013
Hpy166II GTNNAC 4 cut(s) 219, 280, 348, 934
Hpy188I TCNGA 4 cut(s) 28, 63, 618, 1055
Hpy188III TCNNGA 5 cut(s) 73, 519, 536, 571, 1005
Hpy8I GTNNAC 4 cut(s) 219, 280, 348, 934
Hpy99I CGWCG 3 cut(s) 151, 560, 572
HpyCH4IV ACGT 1 cut(s) 462
HpyCH4V TGCA 4 cut(s) 45, 196, 625, 928
HpyF10VI GCNNNNNNNGC 5 cut(s) 172, 266, 269, 444, 836
HpyF3I CTNAG 7 cut(s) 234, 392, 578, 689, 821, 1052, 1071
HpySE526I ACGT 1 cut(s) 462
Hsp92I GRCGYC 1 cut(s) 462
Hsp92II CATG 4 cut(s) 100, 355, 367, 424
HspAI GCGC 4 cut(s) 66, 227, 818, 1013
KflI GGGWCCC 1 cut(s) 122
Kpn2I TCCGGA 1 cut(s) 518
KroI GCCGGC 1 cut(s) 668
KroNI GCCGGC 1 cut(s) 670
KspI CCGCGG 1 cut(s) 261
Kzo9I GATC 2 cut(s) 33, 58
LmnI GCTCC 5 cut(s) 63, 172, 239, 373, 595
Lsp1109I GCAGC 8 cut(s) 180, 256, 363, 398, 496, 609, 839, 1040
LweI GCATC 1 cut(s) 322
MabI ACCWGGT 1 cut(s) 749
MaeII ACGT 1 cut(s) 462
MaeIII GTNAC 1 cut(s) 154
MalI GATC 2 cut(s) 35, 60
MboI GATC 2 cut(s) 33, 58
MboII GAAGA 9 cut(s) 101, 104, 121, 289, 620, 628, 650, 692, 709
MhlI GDGCHC 3 cut(s) 293, 600, 705
MlsI TGGCCA 1 cut(s) 101
MluCI AATT 2 cut(s) 114, 734
MluNI TGGCCA 1 cut(s) 101
MlyI GAGTC 2 cut(s) 214, 403
MmeI TCCRAC 2 cut(s) 940, 994
Mox20I TGGCCA 1 cut(s) 101
MroI TCCGGA 1 cut(s) 518
MroNI GCCGGC 1 cut(s) 668
MroXI GAANNNNTTC 2 cut(s) 612, 635
MscI TGGCCA 1 cut(s) 101
Msp20I TGGCCA 1 cut(s) 101
MspA1I CMGCKG 2 cut(s) 260, 852
MspI CCGG 8 cut(s) 283, 492, 519, 583, 592, 669, 782, 953
MspR9I CCNGG 8 cut(s) 244, 274, 584, 593, 751, 767, 791, 857
MvaI CCWGG 6 cut(s) 244, 274, 751, 767, 791, 857
MvnI CGCG 2 cut(s) 229, 260
MwoI GCNNNNNNNGC 5 cut(s) 172, 266, 269, 444, 836
NaeI GCCGGC 1 cut(s) 670
NciI CCSGG 2 cut(s) 584, 593
NcoI CCATGG 3 cut(s) 351, 363, 420
NdeII GATC 2 cut(s) 33, 58
NgoMIV GCCGGC 1 cut(s) 668
NlaIII CATG 4 cut(s) 100, 355, 367, 424
NlaIV GGNNCC 7 cut(s) 123, 124, 241, 448, 597, 901, 960
NmeAIII GCCGAG 6 cut(s) 423, 446, 698, 886, 966, 1057
NmuCI GTSAC 1 cut(s) 154
PceI AGGCCT 1 cut(s) 710
PcsI WCGNNNNNNNCGW 1 cut(s) 564
PdiI GCCGGC 1 cut(s) 670
PdmI GAANNNNTTC 2 cut(s) 612, 635
PflMI CCANNNNNTGG 3 cut(s) 118, 309, 796
Ple19I CGATCG 1 cut(s) 61
PleI GAGTC 2 cut(s) 214, 402
PpsI GAGTC 2 cut(s) 214, 402
PpuMI RGGWCCY 1 cut(s) 122
Psp5II RGGWCCY 1 cut(s) 122
Psp6I CCWGG 6 cut(s) 242, 272, 749, 765, 789, 855
PspGI CCWGG 6 cut(s) 242, 272, 749, 765, 789, 855
PspN4I GGNNCC 7 cut(s) 123, 124, 241, 448, 597, 901, 960
PspPI GGNCC 8 cut(s) 122, 246, 424, 437, 446, 564, 787, 899
PspPPI RGGWCCY 1 cut(s) 122
PstI CTGCAG 1 cut(s) 198
PstNI CAGNNNCTG 2 cut(s) 622, 796
PvuI CGATCG 1 cut(s) 61
RsaI GTAC 3 cut(s) 728, 748, 1059
RsaNI GTAC 3 cut(s) 727, 747, 1058
SacII CCGCGG 1 cut(s) 261
SalI GTCGAC 2 cut(s) 278, 346
Sau3AI GATC 2 cut(s) 33, 58
Sau96I GGNCC 8 cut(s) 122, 246, 424, 437, 446, 564, 787, 899
SchI GAGTC 2 cut(s) 214, 403
ScrFI CCNGG 8 cut(s) 244, 274, 584, 593, 751, 767, 791, 857
SduI GDGCHC 3 cut(s) 293, 600, 705
SexAI ACCWGGT 1 cut(s) 749
SfaNI GCATC 1 cut(s) 322
SfcI CTRYAG 1 cut(s) 194
SfiI GGCCNNNNNGGCC 1 cut(s) 444
Sfr303I CCGCGG 1 cut(s) 261
SgrBI CCGCGG 1 cut(s) 261
SinI GGWCC 3 cut(s) 122, 424, 899
SmlI CTYRAG 2 cut(s) 167, 601
SmoI CTYRAG 2 cut(s) 167, 601
Sse9I AATT 2 cut(s) 114, 734
SseBI AGGCCT 1 cut(s) 710
SsiI CCGC 6 cut(s) 229, 258, 260, 850, 887, 981
StuI AGGCCT 1 cut(s) 710
StyD4I CCNGG 8 cut(s) 242, 272, 582, 591, 749, 765, 789, 855
StyI CCWWGG 5 cut(s) 303, 351, 363, 420, 475
TaiI ACGT 1 cut(s) 465
TasI AATT 2 cut(s) 114, 734
TauI GCSGC 3 cut(s) 232, 263, 983
TscAI CASTG 3 cut(s) 147, 182, 801
TseFI GTSAC 1 cut(s) 154
TseI GCWGC 8 cut(s) 193, 269, 376, 386, 509, 622, 852, 1028
Tsp45I GTSAC 1 cut(s) 154
TspDTI ATGAA 2 cut(s) 43, 727
TspGWI ACGGA 1 cut(s) 912
TspRI CASTG 3 cut(s) 147, 182, 801
Van91I CCANNNNNTGG 3 cut(s) 118, 309, 796
VpaK11BI GGWCC 3 cut(s) 122, 424, 899
XagI CCTNNNNNAGG 3 cut(s) 167, 194, 860
XapI RAATTY 2 cut(s) 114, 734
XcmI CCANNNNNNNNNTGG 1 cut(s) 418
XmiI GTMKAC 2 cut(s) 279, 347
XmnI GAANNNNTTC 2 cut(s) 612, 635
ZraI GACGTC 1 cut(s) 463
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.