Rmu_sc0000315.1_g000084
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000315.1
OG0000063
Physical Location & Seq
Reverse (-)
308138 .. 311605
3468 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000315.1_g000084.1.cds

Sequence Viewer

Length: 2406 bp
atggccgatgatagctcagaaaccgaaacggggctagaggataatgaagcaacaaaagcacaattggctgtaatgaaagcacaactggcagaattctcaaccaaatttgaagctgcttttagtgcttctatggacaagctccaaagctctgtgatatgtcggttggcaaagaataaggaaccgcaaagagagtgtgtattaggaccccattacagcttgggtatgccgccagccatcaacgaggttctagaaaattcgttggtggacacatcttgcttgacccgcggagctagctgcactttctatgccgaacatgcaattgccgaggatgtgtccacggtcgagaggcacgaaccaacacaacatgagcacgccgctttcctcttttattggttatgcaaatacatgttttgcacgaagtcgaacaagtacttgttcgagtttgctggtattgcggaggcccttagcttgggtaaacctttagcccttggtccgtttgtccttgcctatctttaccgtactttgcgtaatgtggtgaccaacaatatgacactagatgttggagggccgttatggatgttccaggtatgggtgcagccttactttcatcagcttcgaccaagtcatccttttgattccactgtgattctcggccgccagatcatctctcttggtcctcatgcacattctgtagcagaatgctttgctttcttcctttcgaaaaagagcatgaccaaggacgagtttgccatatgttatagccgagactatccttcttgtcttgcattaaacataatgaaaccatgggagaggtctttggacttgtcaagatgggtttacagacaccgcgtattgttcggccatcactctttattatcagactcagtttggcaacttgagagatccggcctgagcgcccgcgaacctgatcatagagcaactcctactttccaaacttggtggtcaacatttatcaagaagaaacttggagaggacttgcggacaaccgagcgtattgccttgtatggattcccgggcttgttcaccaacaaaggcaatgacaagaaaaacgcattggttgccaagtcgaaatccaaagaaaagtccaaggaagagcaaacctcaaagaaactagaatcaaagtcgggaagagctctgcctaccaagaaggtaaagaagtcacctgacgcggtggagagttcggtcacgaattcggctgacattatggttagtgaagtcataattttcgagggtgatatggataatagccaaaatgttctagttgaaaatcacatcatggctggagctgaggatgtggccgaaactattaatgcctcaaacaataacacgggctcggccgacagcagaggttcgcctgatgaagcacagtcagaaaactttgagcacgagagagatgaccgcattgatcactcttcgcatcctcctgaaagcaacatggttgaaattgacatggatgatttgggtgagaaccagcttcttaatatcgaccaaccactcgcaaactcacataaccttgctaaggattcggaagacatcggcgtacttggccgagaagcattgcttaaccaccaaacacttgtcccggtacgaggaactcaaagcagttcaaccttggagttggttcttctcaatccaactgaaccaaatccttctatgttcagaatgcttaccacctctcttactgaagggacgcctcgagatgatcaagctatcgtttgcgccccatcgtcggctgagcctgtggatcaaacaacatgcgatcttggtctggagctacttcaatttctcgatacactagataacaacacgagcccggtggaggaaaagcttgaaacaaccgaaaccaagaaggcactagaatcggtcagacaatttttgggttatgatacgagagcagtaaccgaggctagttctcttgctttcaaggaggcggttgaagtacttatttcagccaaccatttatctcaagtagaagcttatgaagttcatgcccttttgtcccgtgcaaattttagtctctctccctgcctagaagcccaaaaagagtttgaaaccggtgagaagttgatgagtgagtatacagaaattcgccagtctaccgatcttggccaacttcataagttgaagacttctttggatgagggaaggcaaaaagtgcgtgatttgaaaaagcaattggtcgaagctgaagagcaagtcaaaatcacttcggcctccatccgaaccattgttcctcaacaagatctcactaggtatagcttgattttgtcatcggtcaagtcgtacaacaagaagaaatgcattttgaagcgaaaggtcgaccaaggtatggaagacttggaaaaggttaaggaagttcttcggtctcttctaccctctgactag

Protein Analysis

801

Amino Acids

89.67

Weight (kDa)

5.39

Isoelectric Point (pI)

43.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000063)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21382 FvH4_1g29794 FvH4_1g29795 FvH4_2g35573 FvH4_2g35574 FvH4_4g18552 FvH4_5g16044
malus_domestica MD05G1017000.v1.1
prunus_persica Prupe.3G140800_v2.0.a1 Prupe.6G164100_v2.0.a1
pyrus_communis pycom01g04330 pycom03g19820 pycom04g06720 pycom06g11360 pycom06g19000 pycom10g08100 pycom13g16660 pycom13g27590 pycom13g27640 pycom13g27890 pycom16g11770 pycom16g19530
rosa_chinensis RchiOBHm_Chr1g0317341 RchiOBHm_Chr1g0317351 RchiOBHm_Chr1g0320431 RchiOBHm_Chr1g0320711 RchiOBHm_Chr1g0320721 RchiOBHm_Chr1g0321611 RchiOBHm_Chr1g0321621 RchiOBHm_Chr1g0321631 RchiOBHm_Chr1g0323651 RchiOBHm_Chr1g0332991 RchiOBHm_Chr1g0333001 RchiOBHm_Chr1g0335981 RchiOBHm_Chr1g0335991 RchiOBHm_Chr1g0336001 RchiOBHm_Chr1g0350201 RchiOBHm_Chr1g0368201 RchiOBHm_Chr2g0105531 RchiOBHm_Chr2g0105541 RchiOBHm_Chr2g0116571 RchiOBHm_Chr2g0116581 RchiOBHm_Chr2g0121071 RchiOBHm_Chr2g0131351 RchiOBHm_Chr2g0131661 RchiOBHm_Chr2g0133021 RchiOBHm_Chr2g0138181 RchiOBHm_Chr2g0138191 RchiOBHm_Chr2g0142701 RchiOBHm_Chr2g0142711 RchiOBHm_Chr2g0152981 RchiOBHm_Chr3g0456181 RchiOBHm_Chr3g0456191 RchiOBHm_Chr3g0493631 RchiOBHm_Chr3g0496201 RchiOBHm_Chr4g0401541 RchiOBHm_Chr4g0410311 RchiOBHm_Chr4g0410321 RchiOBHm_Chr4g0419231 RchiOBHm_Chr4g0419511 RchiOBHm_Chr4g0419521 RchiOBHm_Chr5g0004311 RchiOBHm_Chr5g0004321 RchiOBHm_Chr5g0038131 RchiOBHm_Chr5g0038251 RchiOBHm_Chr5g0038261 RchiOBHm_Chr5g0038271 RchiOBHm_Chr5g0052241 RchiOBHm_Chr5g0053911 RchiOBHm_Chr5g0074641 RchiOBHm_Chr5g0076651 RchiOBHm_Chr5g0076661 RchiOBHm_Chr6g0249161 RchiOBHm_Chr6g0249171 RchiOBHm_Chr6g0250961 RchiOBHm_Chr6g0253701 RchiOBHm_Chr6g0262131 RchiOBHm_Chr6g0263181 RchiOBHm_Chr6g0263231 RchiOBHm_Chr6g0263241 RchiOBHm_Chr6g0263251 RchiOBHm_Chr6g0291271 RchiOBHm_Chr7g0194611 RchiOBHm_Chr7g0219691 RchiOBHm_Chr7g0219701 RchiOBHm_Chr7g0225431 RchiOBHm_Chr7g0234221 RchiOBHm_Chr7g0238711 RchiOBHm_Chr7g0238721 RchiOBHm_Chr7g0238731 RchiOBHm_Chr7g0239611 RchiOBHm_Chr7g0239621
rosa_laevigata RLG00000001361 RLG00000001376 RLG00000001860 RLG00000002051 RLG00000002362 RLG00000008940 RLG00000012764 RLG00000018782 RLG00000029639 RLG00000030151
rosa_multiflora Rmu_co8090794.1_g000001 Rmu_co8135356.1_g000001 Rmu_co8224968.1_g000001 Rmu_sc0000016.1_g000020 Rmu_sc0000029.1_g000061 Rmu_sc0000035.1_g000032 Rmu_sc0000060.1_g000041 Rmu_sc0000148.1_g000041 Rmu_sc0000315.1_g000084 Rmu_sc0000527.1_g000005 Rmu_sc0000527.1_g000007 Rmu_sc0000527.1_g000008 Rmu_sc0000648.1_g000002 Rmu_sc0000762.1_g000076 Rmu_sc0000870.1_g000003 Rmu_sc0000870.1_g000004 Rmu_sc0000948.1_g000037 Rmu_sc0000997.1_g000003 Rmu_sc0001047.1_g000041 Rmu_sc0001047.1_g000042 Rmu_sc0001075.1_g000044 Rmu_sc0001174.1_g000006 Rmu_sc0001235.1_g000025 Rmu_sc0001292.1_g000008 Rmu_sc0001301.1_g000038 Rmu_sc0001461.1_g000069 Rmu_sc0001461.1_g000070 Rmu_sc0001669.1_g000041 Rmu_sc0001689.1_g000027 Rmu_sc0001896.1_g000008 Rmu_sc0001909.1_g000013 Rmu_sc0002170.1_g000038 Rmu_sc0002200.1_g000014 Rmu_sc0002283.1_g000027 Rmu_sc0002284.1_g000014 Rmu_sc0002294.1_g000017 Rmu_sc0002294.1_g000018 Rmu_sc0002307.1_g000020 Rmu_sc0002307.1_g000021 Rmu_sc0002307.1_g000023 Rmu_sc0002357.1_g000054 Rmu_sc0002409.1_g000005 Rmu_sc0002535.1_g000002 Rmu_sc0002589.1_g000014 Rmu_sc0002759.1_g000016 Rmu_sc0002759.1_g000017 Rmu_sc0002777.1_g000015 Rmu_sc0002824.1_g000016 Rmu_sc0002872.1_g000005 Rmu_sc0002872.1_g000012 Rmu_sc0002872.1_g000013 Rmu_sc0002942.1_g000019 Rmu_sc0003337.1_g000001 Rmu_sc0003410.1_g000052 Rmu_sc0003445.1_g000010 Rmu_sc0003773.1_g000007 Rmu_sc0003773.1_g000008 Rmu_sc0003895.1_g000002 Rmu_sc0004063.1_g000006 Rmu_sc0004088.1_g000009 Rmu_sc0004088.1_g000010 Rmu_sc0004174.1_g000027 Rmu_sc0004196.1_g000010 Rmu_sc0004515.1_g000006 Rmu_sc0004727.1_g000010 Rmu_sc0004755.1_g000018 Rmu_sc0005016.1_g000030 Rmu_sc0005026.1_g000001 Rmu_sc0005044.1_g000007 Rmu_sc0005284.1_g000001 Rmu_sc0005431.1_g000030 Rmu_sc0005802.1_g000014 Rmu_sc0005802.1_g000015 Rmu_sc0005994.1_g000004 Rmu_sc0005994.1_g000005 Rmu_sc0006059.1_g000048 Rmu_sc0006583.1_g000013 Rmu_sc0006824.1_g000009 Rmu_sc0007458.1_g000005 Rmu_sc0007707.1_g000002 Rmu_sc0008242.1_g000012 Rmu_sc0008713.1_g000006 Rmu_sc0008770.1_g000008 Rmu_sc0009785.1_g000004 Rmu_sc0009785.1_g000005 Rmu_sc0010125.1_g000001 Rmu_sc0010211.1_g000004 Rmu_sc0011034.1_g000001 Rmu_sc0011833.1_g000006 Rmu_sc0014851.1_g000001 Rmu_sc0014899.1_g000001 Rmu_sc0015060.1_g000003 Rmu_sc0015186.1_g000001 Rmu_sc0015248.1_g000003 Rmu_sc0015248.1_g000004 Rmu_sc0015314.1_g000001 Rmu_sc0018098.1_g000002 Rmu_sc0022706.1_g000004 Rmu_sc0023350.1_g000002 Rmu_sc0027636.1_g000001 Rmu_sc0027672.1_g000003 Rmu_sc0030879.1_g000001 Rmu_ssc0000008.1_g000029 Rmu_ssc0000019.1_g000014 Rmu_ssc0000050.1_g000082 Rmu_ssc0000282.1_g000004 Rmu_ssc0000311.1_g000010
rosa_roxburghii Rroxscaffold_1G00015190 Rroxscaffold_1G00031880 Rroxscaffold_1G00031890 Rroxscaffold_1G00059310 Rroxscaffold_1G00060420 Rroxscaffold_1G00067930 Rroxscaffold_1G00075030 Rroxscaffold_2G00082210 Rroxscaffold_2G00122970 Rroxscaffold_3G00218230 Rroxscaffold_3G00219020 Rroxscaffold_3G00219030 Rroxscaffold_3G00223680 Rroxscaffold_3G00223690 Rroxscaffold_3G00223700 Rroxscaffold_3G00226870 Rroxscaffold_3G00226880 Rroxscaffold_3G00232990 Rroxscaffold_3G00265610 Rroxscaffold_3G00265620 Rroxscaffold_3G00265630 Rroxscaffold_4G00318660 Rroxscaffold_4G00319060 Rroxscaffold_4G00323500 Rroxscaffold_5G00357520 Rroxscaffold_5G00366150 Rroxscaffold_5G00377470 Rroxscaffold_6G00395700 Rroxscaffold_6G00413950 Rroxscaffold_7G00187650 Rroxscaffold_7G00198290 Rroxscaffold_7G00198300 Rroxscaffold_7G00208060
rosa_rugosa Rorug01G0173900 Rorug01G0174000 Rorug01G0174100 Rorug01G0174100 Rorug02G0341200 Rorug04G0135700 Rorug04G0135800 Rorug05G0032500 Rorug06G0021800
rosa_samantha Rh1AG036600 Rh1AG245800 Rh1CG021700 Rh1CG021800 Rh1CG085800 Rh1CG085900 Rh1CG187900 Rh1CG229600 Rh1CG239600 Rh1CG246500 Rh1CG246600 Rh2BG478100 Rh2DG341300 Rh2DG366600 Rh2DG375700 Rh2DG384300 Rh2DG487000 Rh2DG504000 Rh2DG504100 Rh3AG311800 Rh3AG327500 Rh3AG328300 Rh3BG345100 Rh3CG320100 Rh4AG005700 Rh4AG067900 Rh4AG068000 Rh4AG084400 Rh4AG106700 Rh4AG160000 Rh4AG173900 Rh4AG174000 Rh4CG125300 Rh4CG125500 Rh4CG264500 Rh4DG110800 Rh5AG047300 Rh5AG085200 Rh5AG126300 Rh5AG127300 Rh5AG203000 Rh5AG332400 Rh5AG332500 Rh5AG342400 Rh5AG344100 Rh5AG375600 Rh5AG378300 Rh5AG386000 Rh5AG529600 Rh5BG125200 Rh5CG137600 Rh5CG137700 Rh5DG125200 Rh6BG134100 Rh6BG175400 Rh6BG179500 Rh6BG179600 Rh6BG181600 Rh6BG181700 Rh6BG191100 Rh6BG232900 Rh6BG259700 Rh6BG259800 Rh7AG028000 Rh7AG319400 Rh7AG352700 Rh7AG352800 Rh7AG352900 Rh7AG482500 Rh7AG482600 Rh7AG503800 Rh7BG334700 Rh7CG200100 Rh7CG336200 Rh7CG370200 Rh7CG370400 Rh7CG370500
rosa_wichuraiana Rw1G001580 Rw1G003570 Rw1G004260 Rw1G004270 Rw1G021170 Rw2G019390 Rw2G040280 Rw2G044050 Rw4G004430 Rw5G010950 Rw5G018350 Rw5G032890 Rw6G002840 Rw6G006510 Rw6G007780 Rw6G033790 Rw7G036320 Rw7G040550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 2350
AccI GTMKAC 3 cut(s) 2099, 2117, 2340
AccII CGCG 4 cut(s) 285, 849, 921, 1190
AclWI GGATC 2 cut(s) 897, 1773
AcoI YGGCCR 7 cut(s) 3, 652, 859, 1317, 1356, 1567, 2128
AcsI RAATTY 6 cut(s) 92, 104, 253, 1210, 2029, 2106
AcuI CTGAAG 2 cut(s) 1725, 2229
AcyI GRCGYC 1 cut(s) 1712
AfaI GTAC 6 cut(s) 431, 520, 1563, 1608, 1962, 2306
AfiI CCNNNNNNNGG 8 cut(s) 30, 469, 589, 1540, 1610, 1750, 1840, 2350
AflIII ACRYGT 1 cut(s) 405
AgeI ACCGGT 1 cut(s) 2075
AjnI CCWGG 1 cut(s) 582
AjuI GAANNNNNNNTTGG 6 cut(s) 1058, 1090, 2138, 2170, 2180, 2212
AloI GAACNNNNNNTCC 2 cut(s) 2236, 2268
Alw21I GWGCWC 3 cut(s) 372, 1156, 1407
Alw26I GTCTC 3 cut(s) 759, 2042, 2391
AlwI GGATC 2 cut(s) 897, 1773
Ama87I CYCGRG 2 cut(s) 1033, 1716
ApeKI GCWGC 3 cut(s) 113, 294, 595
ApoI RAATTY 6 cut(s) 92, 104, 253, 1210, 2029, 2106
AseI ATTAAT 1 cut(s) 1329
AsiGI ACCGGT 1 cut(s) 2075
Asp700I GAANNNNTTC 1 cut(s) 2379
AspLEI GCGC 2 cut(s) 917, 1742
AspS9I GGNCC 5 cut(s) 203, 460, 491, 566, 674
AsuC2I CCSGG 4 cut(s) 1034, 1035, 1604, 1835
AsuHPI GGTGA 6 cut(s) 547, 1036, 1173, 1265, 1496, 2090
AsuII TTCGAA 1 cut(s) 719
AsuNHI GCTAGC 1 cut(s) 290
AvaI CYCGRG 2 cut(s) 1033, 1716
AvaII GGWCC 3 cut(s) 203, 491, 674
BalI TGGCCA 1 cut(s) 2130
BanII GRGCYC 3 cut(s) 1156, 1355, 1835
BauI CACGAG 2 cut(s) 1406, 1828
BbsI GAAGAC 3 cut(s) 1557, 2153, 2361
Bbv12I GWGCWC 3 cut(s) 372, 1156, 1407
BbvCI CCTCAGC 1 cut(s) 1308
BbvI GCAGC 3 cut(s) 100, 281, 607
BccI CCATC 5 cut(s) 242, 825, 870, 1753, 2246
BceAI ACGGC 1 cut(s) 553
BcgI CGANNNNNNTGC 4 cut(s) 998, 1032, 1863, 1897
BciT130I CCWGG 1 cut(s) 584
BclI TGATCA 3 cut(s) 928, 1426, 1723
BcnI CCSGG 4 cut(s) 1034, 1035, 1604, 1835
BcoDI GTCTC 3 cut(s) 759, 2042, 2391
BfmI CTRYAG 1 cut(s) 690
BfoI RGCGCY 1 cut(s) 918
BglII AGATCT 1 cut(s) 2263
BisI GCNGC 6 cut(s) 114, 227, 295, 375, 596, 655
BlpI GCTNAGC 1 cut(s) 1755
BlsI GCNGC 6 cut(s) 115, 228, 296, 376, 597, 656
BmcAI AGTACT 2 cut(s) 431, 1962
Bme1390I CCNGG 5 cut(s) 584, 1034, 1035, 1604, 1835
Bme18I GGWCC 3 cut(s) 203, 491, 674
BmeT110I CYCGRG 2 cut(s) 1033, 1716
BmgT120I GGNCC 5 cut(s) 203, 460, 491, 566, 674
BmiI GGNNCC 2 cut(s) 180, 205
BmrFI CCNGG 5 cut(s) 584, 1034, 1035, 1604, 1835
BmsI GCATC 1 cut(s) 1447
BmtI GCTAGC 1 cut(s) 294
BpiI GAAGAC 3 cut(s) 1557, 2153, 2361
BplI GAGNNNNNCTC 2 cut(s) 1106, 1138
BpmI CTGGAG 2 cut(s) 1323, 1811
Bpu10I CCTNAGC 4 cut(s) 464, 911, 1308, 1539
Bpu1102I GCTNAGC 1 cut(s) 1755
Bpu14I TTCGAA 1 cut(s) 719
BpuEI CTTGAG 2 cut(s) 917, 1971
BpuMI CCSGG 4 cut(s) 1034, 1035, 1604, 1835
BsaHI GRCGYC 1 cut(s) 1712
BsaI GGTCTC 1 cut(s) 2391
BsaWI WCCGGW 1 cut(s) 2075
Bsc4I CCNNNNNNNGG 8 cut(s) 30, 469, 589, 1540, 1610, 1750, 1840, 2350
Bse118I RCCGGY 1 cut(s) 2075
Bse1I ACTGG 2 cut(s) 90, 2113
Bse3DI GCAATG 2 cut(s) 1063, 1577
BseBI CCWGG 1 cut(s) 584
BseGI GGATG 8 cut(s) 334, 582, 625, 1318, 1438, 1480, 2164, 2238
BseLI CCNNNNNNNGG 8 cut(s) 30, 469, 589, 1540, 1610, 1750, 1840, 2350
BseMI GCAATG 2 cut(s) 1063, 1577
BseMII CTCAG 5 cut(s) 30, 897, 902, 1299, 1746
BseNI ACTGG 2 cut(s) 90, 2113
BseX3I CGGCCG 2 cut(s) 652, 1356
BseXI GCAGC 3 cut(s) 100, 281, 607
BsgI GTGCAG 2 cut(s) 280, 614
Bsh1236I CGCG 4 cut(s) 285, 849, 921, 1190
Bsh1285I CGRYCG 3 cut(s) 342, 655, 1359
BshTI ACCGGT 1 cut(s) 2075
BsiEI CGRYCG 3 cut(s) 342, 655, 1359
BsiHKAI GWGCWC 3 cut(s) 372, 1156, 1407
BsiHKCI CYCGRG 2 cut(s) 1033, 1716
BsiSI CCGG 5 cut(s) 906, 1034, 1604, 1835, 2076
BslFI GGGAC 3 cut(s) 1586, 1723, 2005
BslI CCNNNNNNNGG 8 cut(s) 30, 469, 589, 1540, 1610, 1750, 1840, 2350
BsmAI GTCTC 3 cut(s) 759, 2042, 2391
BsmFI GGGAC 3 cut(s) 1586, 1723, 2005
BsmI GAATGC 2 cut(s) 704, 1689
Bso31I GGTCTC 1 cut(s) 2391
BsoBI CYCGRG 2 cut(s) 1033, 1716
Bsp119I TTCGAA 1 cut(s) 719
Bsp1286I GDGCHC 5 cut(s) 372, 1156, 1355, 1407, 1835
Bsp143I GATC 9 cut(s) 660, 902, 928, 1426, 1723, 1765, 1780, 2122, 2263
Bsp1720I GCTNAGC 1 cut(s) 1755
Bsp19I CCATGG 1 cut(s) 803
BspCNI CTCAG 5 cut(s) 29, 896, 903, 1300, 1747
BspFNI CGCG 4 cut(s) 285, 849, 921, 1190
BspLI GGNNCC 2 cut(s) 180, 205
BspOI GCTAGC 1 cut(s) 294
BspPI GGATC 2 cut(s) 897, 1773
BspQI GCTCTTC 3 cut(s) 1107, 1144, 2205
BspT104I TTCGAA 1 cut(s) 719
BspTNI GGTCTC 1 cut(s) 2391
BsrDI GCAATG 2 cut(s) 1063, 1577
BsrFI RCCGGY 1 cut(s) 2075
BsrI ACTGG 2 cut(s) 90, 2113
BssAI RCCGGY 1 cut(s) 2075
BssMI GATC 9 cut(s) 660, 902, 928, 1426, 1723, 1765, 1780, 2122, 2263
BssNAI GTATAC 1 cut(s) 2100
BssNI GRCGYC 1 cut(s) 1712
BssSI CACGAG 2 cut(s) 1406, 1828
BssT1I CCWWGG 6 cut(s) 487, 735, 803, 1107, 1632, 2344
Bst1107I GTATAC 1 cut(s) 2100
Bst2BI CACGAG 2 cut(s) 1406, 1828
Bst2UI CCWGG 1 cut(s) 584
Bst4CI ACNGT 4 cut(s) 340, 518, 643, 1389
Bst6I CTCTTC 5 cut(s) 1107, 1144, 1438, 2205, 2394
BstACI GRCGYC 1 cut(s) 1712
BstAPI GCANNNNNTGC 2 cut(s) 1079, 2176
BstBI TTCGAA 1 cut(s) 719
BstC8I GCNNGC 4 cut(s) 231, 292, 372, 919
BstDEI CTNAG 7 cut(s) 16, 464, 883, 911, 1308, 1539, 1755
BstDSI CCRYGG 3 cut(s) 283, 336, 803
BstEII GGTNACC 1 cut(s) 535
BstENI CCTNNNNNAGG 1 cut(s) 1538
BstF5I GGATG 8 cut(s) 334, 582, 625, 1318, 1438, 1480, 2164, 2238
BstFNI CGCG 4 cut(s) 285, 849, 921, 1190
BstH2I RGCGCY 1 cut(s) 918
BstHHI GCGC 2 cut(s) 917, 1742
BstKTI GATC 9 cut(s) 663, 905, 931, 1429, 1726, 1768, 1783, 2125, 2266
BstMAI GTCTC 3 cut(s) 759, 2042, 2391
BstMBI GATC 9 cut(s) 660, 902, 928, 1426, 1723, 1765, 1780, 2122, 2263
BstMCI CGRYCG 3 cut(s) 342, 655, 1359
BstNI CCWGG 1 cut(s) 584
BstNSI RCATGY 3 cut(s) 317, 409, 1779
BstPI GGTNACC 1 cut(s) 535
BstSCI CCNGG 5 cut(s) 582, 1032, 1033, 1602, 1833
BstSFI CTRYAG 1 cut(s) 690
BstUI CGCG 4 cut(s) 285, 849, 921, 1190
BstV1I GCAGC 3 cut(s) 100, 281, 607
BstV2I GAAGAC 3 cut(s) 1557, 2153, 2361
BstX2I RGATCY 2 cut(s) 902, 2263
BstYI RGATCY 2 cut(s) 902, 2263
BstZ17I GTATAC 1 cut(s) 2100
BstZI CGGCCG 2 cut(s) 652, 1356
BtgI CCRYGG 3 cut(s) 283, 336, 803
BtsCI GGATG 8 cut(s) 334, 582, 625, 1318, 1438, 1480, 2164, 2238
BtsIMutI CAGTG 1 cut(s) 639
Cac8I GCNNGC 4 cut(s) 231, 292, 372, 919
CfoI GCGC 2 cut(s) 917, 1742
Cfr10I RCCGGY 1 cut(s) 2075
Cfr13I GGNCC 5 cut(s) 203, 460, 491, 566, 674
Cfr42I CCGCGG 1 cut(s) 286
Cfr9I CCCGGG 1 cut(s) 1033
CseI GACGC 2 cut(s) 1196, 1720
Csp6I GTAC 6 cut(s) 430, 519, 1562, 1607, 1961, 2305
CspAI ACCGGT 1 cut(s) 2075
CspCI CAANNNNNGTGG 2 cut(s) 941, 976
CviQI GTAC 6 cut(s) 430, 519, 1562, 1607, 1961, 2305
DdeI CTNAG 7 cut(s) 16, 464, 883, 911, 1308, 1539, 1755
DpnI GATC 9 cut(s) 662, 904, 930, 1428, 1725, 1767, 1782, 2124, 2265
DpnII GATC 9 cut(s) 660, 902, 928, 1426, 1723, 1765, 1780, 2122, 2263
EaeI YGGCCR 7 cut(s) 3, 652, 859, 1317, 1356, 1567, 2128
EagI CGGCCG 2 cut(s) 652, 1356
Eam1104I CTCTTC 5 cut(s) 1107, 1144, 1438, 2205, 2394
EarI CTCTTC 5 cut(s) 1107, 1144, 1438, 2205, 2394
Ecl136II GAGCTC 1 cut(s) 1154
EclXI CGGCCG 2 cut(s) 652, 1356
Eco130I CCWWGG 6 cut(s) 487, 735, 803, 1107, 1632, 2344
Eco24I GRGCYC 3 cut(s) 1156, 1355, 1835
Eco31I GGTCTC 1 cut(s) 2391
Eco47I GGWCC 3 cut(s) 203, 491, 674
Eco52I CGGCCG 2 cut(s) 652, 1356
Eco53kI GAGCTC 1 cut(s) 1154
Eco57I CTGAAG 2 cut(s) 1725, 2229
Eco88I CYCGRG 2 cut(s) 1033, 1716
Eco91I GGTNACC 1 cut(s) 535
EcoICRI GAGCTC 1 cut(s) 1154
EcoNI CCTNNNNNAGG 1 cut(s) 1538
EcoO109I RGGNCCY 2 cut(s) 203, 460
EcoO65I GGTNACC 1 cut(s) 535
EcoRI GAATTC 2 cut(s) 92, 1210
EcoRII CCWGG 1 cut(s) 582
EcoT14I CCWWGG 6 cut(s) 487, 735, 803, 1107, 1632, 2344
EcoT22I ATGCAT 1 cut(s) 2324
EcoT38I GRGCYC 3 cut(s) 1156, 1355, 1835
ErhI CCWWGG 6 cut(s) 487, 735, 803, 1107, 1632, 2344
FalI AAGNNNNNCTT 4 cut(s) 613, 645, 1566, 1598
FaqI GGGAC 3 cut(s) 1586, 1723, 2005
FauI CCCGC 2 cut(s) 290, 926
FauNDI CATATG 1 cut(s) 752
FbaI TGATCA 3 cut(s) 928, 1426, 1723
FblI GTMKAC 3 cut(s) 2099, 2117, 2340
Fnu4HI GCNGC 6 cut(s) 114, 227, 295, 375, 596, 655
FokI GGATG 8 cut(s) 341, 589, 612, 1325, 1425, 1487, 2171, 2225
FriOI GRGCYC 3 cut(s) 1156, 1355, 1835
Fsp4HI GCNGC 6 cut(s) 114, 227, 295, 375, 596, 655
GlaI GCGC 2 cut(s) 916, 1741
GluI GCNGC 6 cut(s) 114, 227, 295, 375, 596, 655
GsuI CTGGAG 2 cut(s) 1323, 1811
HaeII RGCGCY 1 cut(s) 918
HapII CCGG 5 cut(s) 906, 1034, 1604, 1835, 2076
HgaI GACGC 2 cut(s) 1196, 1720
HhaI GCGC 2 cut(s) 917, 1742
Hin1I GRCGYC 1 cut(s) 1712
Hin6I GCGC 2 cut(s) 915, 1740
HinP1I GCGC 2 cut(s) 915, 1740
HincII GTYRAC 2 cut(s) 966, 2341
HindII GTYRAC 2 cut(s) 966, 2341
HindIII AAGCTT 2 cut(s) 1847, 1995
HinfI GANTC 7 cut(s) 635, 646, 881, 1029, 1136, 1544, 1880
HpaII CCGG 5 cut(s) 906, 1034, 1604, 1835, 2076
HphI GGTGA 6 cut(s) 547, 1036, 1173, 1265, 1496, 2090
Hpy166II GTNNAC 9 cut(s) 265, 336, 476, 838, 966, 1044, 2100, 2118, 2341
Hpy188I TCNGA 8 cut(s) 19, 880, 1393, 1549, 1682, 1889, 2243, 2401
Hpy8I GTNNAC 9 cut(s) 265, 336, 476, 838, 966, 1044, 2100, 2118, 2341
Hpy99I CGWCG 1 cut(s) 1753
HpyAV CCTTC 6 cut(s) 783, 1162, 1680, 1700, 1864, 2160
HpyCH4III ACNGT 4 cut(s) 340, 518, 643, 1389
HpyCH4V TGCA 9 cut(s) 297, 317, 399, 414, 595, 683, 785, 2027, 2322
HpyF3I CTNAG 7 cut(s) 16, 464, 883, 911, 1308, 1539, 1755
Hsp92I GRCGYC 1 cut(s) 1712
HspAI GCGC 2 cut(s) 915, 1740
Ksp22I TGATCA 3 cut(s) 928, 1426, 1723
KspI CCGCGG 1 cut(s) 286
Kzo9I GATC 9 cut(s) 660, 902, 928, 1426, 1723, 1765, 1780, 2122, 2263
LguI GCTCTTC 3 cut(s) 1107, 1144, 2205
LmnI GCTCC 4 cut(s) 144, 287, 1304, 1792
Lsp1109I GCAGC 3 cut(s) 100, 281, 607
LweI GCATC 1 cut(s) 1447
MaeIII GTNAC 4 cut(s) 535, 1179, 1204, 1918
MalI GATC 9 cut(s) 662, 904, 930, 1428, 1725, 1767, 1782, 2124, 2265
MboI GATC 9 cut(s) 660, 902, 928, 1426, 1723, 1765, 1780, 2122, 2263
MfeI CAATTG 3 cut(s) 62, 318, 2195
MflI RGATCY 2 cut(s) 902, 2263
MhlI GDGCHC 5 cut(s) 372, 1156, 1355, 1407, 1835
MlsI TGGCCA 1 cut(s) 2130
MluNI TGGCCA 1 cut(s) 2130
MlyI GAGTC 1 cut(s) 875
MmeI TCCRAC 2 cut(s) 541, 1679
Mox20I TGGCCA 1 cut(s) 2130
Mph1103I ATGCAT 1 cut(s) 2324
MroXI GAANNNNTTC 1 cut(s) 2379
MscI TGGCCA 1 cut(s) 2130
MseI TTAA 5 cut(s) 788, 1329, 1500, 1584, 2370
Msp20I TGGCCA 1 cut(s) 2130
MspA1I CMGCKG 1 cut(s) 285
MspI CCGG 5 cut(s) 906, 1034, 1604, 1835, 2076
MspR9I CCNGG 5 cut(s) 584, 1034, 1035, 1604, 1835
MunI CAATTG 3 cut(s) 62, 318, 2195
Mva1269I GAATGC 2 cut(s) 704, 1689
MvaI CCWGG 1 cut(s) 584
MvnI CGCG 4 cut(s) 285, 849, 921, 1190
NciI CCSGG 4 cut(s) 1034, 1035, 1604, 1835
NcoI CCATGG 1 cut(s) 803
NdeI CATATG 1 cut(s) 752
NdeII GATC 9 cut(s) 660, 902, 928, 1426, 1723, 1765, 1780, 2122, 2263
NheI GCTAGC 1 cut(s) 290
NlaIV GGNNCC 2 cut(s) 180, 205
NmeAIII GCCGAG 5 cut(s) 349, 630, 788, 1334, 1595
NmuCI GTSAC 3 cut(s) 535, 1179, 1204
NsiI ATGCAT 1 cut(s) 2324
NspI RCATGY 3 cut(s) 317, 409, 1779
NspV TTCGAA 1 cut(s) 719
PaeR7I CTCGAG 1 cut(s) 1716
PciI ACATGT 1 cut(s) 405
PciSI GCTCTTC 3 cut(s) 1107, 1144, 2205
PcsI WCGNNNNNNNCGW 2 cut(s) 348, 2300
PctI GAATGC 2 cut(s) 704, 1689
PdmI GAANNNNTTC 1 cut(s) 2379
PfeI GAWTC 6 cut(s) 635, 646, 1029, 1136, 1544, 1880
PflFI GACNNNGTC 1 cut(s) 621
PflMI CCANNNNNTGG 1 cut(s) 2350
PinAI ACCGGT 1 cut(s) 2075
PkrI GCNGC 6 cut(s) 115, 228, 296, 376, 597, 656
PleI GAGTC 1 cut(s) 875
PpsI GAGTC 1 cut(s) 875
PpuMI RGGWCCY 1 cut(s) 203
PscI ACATGT 1 cut(s) 405
PshBI ATTAAT 1 cut(s) 1329
Psp124BI GAGCTC 1 cut(s) 1156
Psp5II RGGWCCY 1 cut(s) 203
Psp6I CCWGG 1 cut(s) 582
PspEI GGTNACC 1 cut(s) 535
PspGI CCWGG 1 cut(s) 582
PspN4I GGNNCC 2 cut(s) 180, 205
PspPI GGNCC 5 cut(s) 203, 460, 491, 566, 674
PspPPI RGGWCCY 1 cut(s) 203
PsuI RGATCY 2 cut(s) 902, 2263
PsyI GACNNNGTC 1 cut(s) 621
RsaI GTAC 6 cut(s) 431, 520, 1563, 1608, 1962, 2306
RsaNI GTAC 6 cut(s) 430, 519, 1562, 1607, 1961, 2305
SacI GAGCTC 1 cut(s) 1156
SacII CCGCGG 1 cut(s) 286
SalI GTCGAC 1 cut(s) 2339
SapI GCTCTTC 3 cut(s) 1107, 1144, 2205
SaqAI TTAA 5 cut(s) 788, 1329, 1500, 1584, 2370
SatI GCNGC 6 cut(s) 114, 227, 295, 375, 596, 655
Sau3AI GATC 9 cut(s) 660, 902, 928, 1426, 1723, 1765, 1780, 2122, 2263
Sau96I GGNCC 5 cut(s) 203, 460, 491, 566, 674
ScaI AGTACT 2 cut(s) 431, 1962
SchI GAGTC 1 cut(s) 875
ScrFI CCNGG 5 cut(s) 584, 1034, 1035, 1604, 1835
SduI GDGCHC 5 cut(s) 372, 1156, 1355, 1407, 1835
SfaNI GCATC 1 cut(s) 1447
SfcI CTRYAG 1 cut(s) 690
Sfr274I CTCGAG 1 cut(s) 1716
Sfr303I CCGCGG 1 cut(s) 286
SfuI TTCGAA 1 cut(s) 719
SgrBI CCGCGG 1 cut(s) 286
SinI GGWCC 3 cut(s) 203, 491, 674
SlaI CTCGAG 1 cut(s) 1716
SmaI CCCGGG 1 cut(s) 1035
SmlI CTYRAG 3 cut(s) 896, 1716, 1986
SmoI CTYRAG 3 cut(s) 896, 1716, 1986
SstI GAGCTC 1 cut(s) 1156
StyD4I CCNGG 5 cut(s) 582, 1032, 1033, 1602, 1833
StyI CCWWGG 6 cut(s) 487, 735, 803, 1107, 1632, 2344
TaaI ACNGT 4 cut(s) 340, 518, 643, 1389
TaqII GACCGA 4 cut(s) 1192, 1873, 2284, 2373
TatI WGTACW 2 cut(s) 429, 1960
TauI GCSGC 3 cut(s) 229, 377, 657
TfiI GAWTC 6 cut(s) 635, 646, 1029, 1136, 1544, 1880
Tru1I TTAA 5 cut(s) 788, 1329, 1500, 1584, 2370
Tru9I TTAA 5 cut(s) 788, 1329, 1500, 1584, 2370
TscAI CASTG 1 cut(s) 646
TseFI GTSAC 3 cut(s) 535, 1179, 1204
TseI GCWGC 3 cut(s) 113, 294, 595
Tsp45I GTSAC 3 cut(s) 535, 1179, 1204
TspDTI ATGAA 8 cut(s) 60, 89, 596, 812, 1395, 1997, 2016, 2126
TspGWI ACGGA 1 cut(s) 483
TspMI CCCGGG 1 cut(s) 1033
TspRI CASTG 1 cut(s) 646
Tth111I GACNNNGTC 1 cut(s) 621
Van91I CCANNNNNTGG 1 cut(s) 2350
VpaK11BI GGWCC 3 cut(s) 203, 491, 674
VspI ATTAAT 1 cut(s) 1329
XagI CCTNNNNNAGG 1 cut(s) 1538
XapI RAATTY 6 cut(s) 92, 104, 253, 1210, 2029, 2106
XbaI TCTAGA 1 cut(s) 247
XceI RCATGY 3 cut(s) 317, 409, 1779
XhoI CTCGAG 1 cut(s) 1716
XmaI CCCGGG 1 cut(s) 1033
XmiI GTMKAC 3 cut(s) 2099, 2117, 2340
XmnI GAANNNNTTC 1 cut(s) 2379
ZrmI AGTACT 2 cut(s) 431, 1962
Zsp2I ATGCAT 1 cut(s) 2324
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.