RchiOBHm_Chr7g0194611

dipeptidyl-peptidase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0000063
Physical Location & Seq
Forward (+)
12634737 .. 12639508
4772 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ17403

Sequence Viewer

Length: 2982 bp
ATGGCCGATGATATATCAGAAACTGAGACGGGGTTAGAGGACAGCGAAACAACAAAAGCACAATTGGCTGAATTCTCAACCAAGTTTGAAGCTGCTTTTAGTGCTTCTGTGGACAAACTCCAAAGCTCTGTGATATGTCGGTTGACGAAGAACAAGGAACCGCGAAGAGAGTGCATATTAGGACCACATTACAGCTTGGGTATGCCGCCGGCCATCAACGAGGTTCTAGAAAACTCATTGGTGGACACATCTTGCTTGACCGGCGGAGCTAGCTGGTCTAGTTGGAACACAAATTCTAAACAGCCAGGGAGTTGGCCGAAATCAACACCCGAGTGGAAGAAATGGGTGCCACGGATGGAGCACTTTTTCGGTCGCTCATGGAAAAAATTTGGTATTTATGATAGCATTAAAATGTCCGAACAAGAAATCTACATGGATCGGCCTCTTCTTGCTGCTGCCTTGTGTTTTTGGTCATCTGCTACTAACACCATGAACCTGCCACTCGGGCCAATGAGTCCAACCTTGCTAGATATGGCCGCAATATTTGGTTTTCGGCCGAATGGAGAGGAGATATGTGCCTTAGCTAACCTTCCTTCCTCTTTTCATGCTAGCCTGAGACCCAAAGTGAACAAGGACGACAAGAAAGCCAAACAAAAAGCTGACGCCACAGCGAGGAAATTGCTTAACTATAGCACTTTCTATGCCGAACATGCAATTGCCGAGGATGTGTCCACGGTCGAGAGGCACGAACCAACACAATATGAGCACGCCGCTTTCCTCCTTTATTGGTTATGCAAATACGTGTTTTGCACGAAGTCGAACAAGTGCTTGTTCGAGTTTGCTGGTATTGCGGAGGCCCTTAGCTTGGGTAAACCTTTAGCCCTTGGTCCGTTTGTCCTTGCCTATCTTTACCGTACTCTGCGTAATGTGGTGACCAACAATATGACACTGGATATTGGAGGGCCATTATGGATGTTCCAGGTATGGGTGCAGACTTACTTTCATCAGCTTCGACCAAGTCATCCTTTTGATTCCACTGTGATTCTCGGCCGCCAGATCATCTCTCTTGGTCCTCATTCACATTCGGTAGCAGAATGCTTTGCTTTCTTCCTTTCGAAAAAGAGCATGACCAAGGAAGAGTTTGCCATATGTTATAGCCGAGACTATCCTTCTTGTCTTGCATTAAACATAACGAAACCATGGGAGAGGTCTTTGGACTTGTCAGTACTTCTACCTTGGGGGAGCATTCTCATTTCTCGAGACATAAACTATGGTCTCAAGGGTACACTGGGTCGGCCAGGGGTTGAGGTTTATCTTCCAAACTTTGTTGCGCGTCAGCTTGGCTTCATACAAAGTTGTCCAGCCTTCTTTCTAATGTCCCGGAATCGTTTTTCTTCATGGAGAGATAGGTTTACAGACACCGCGCATTGTTCGGCCGTTACTCTTTATTATCAGACTCAGTTTGGAAACTTTGAGAGATTCGGCCTGAGCGCCCGTGAACCTGATCATAGAGCAACTCCTACTTTCCAAACTTGGTGGTCAACATTTATCAAGAAGAAACTTGGAGAGGACTTGCGAACAACCGAGCGTATTGCCTTGTATGGATTCCCGAGCTTGTTCACCAACAAAGGCAATGACAAGAAGAAGGCACTGGTTGCCAAGTCGAAATCCAAAGAAAAGTCCAAGGAAGAGCAAACCTCAAAGAAACGAGAATCAAAGTCGGGAAGAGCTCTGCCTACCAAGAAGGTAAAGAAGTCACCTGACGCGGTGGAGAGTTCGGTCACGAATCCGGCTGATATTATGGTTAGTGAAGACATAATTTTCGAGGGTGATATGGATAATATCCAAAATGTTCTAGCTGAAAATCACATCATGTCTGGAGCTGAGGATGTGGCCGAAACTAGTAATGCCTCAAACAATAACACGGGCTCGGCCGACAGCGGAGGTTCGCCTGATGAAGCACAGTCAGAAAACTTTGAGCACGAGAGAGATGACCGCATTGATCATTCTTCGCATCCTCCTGAAAGCAACATGGTTGAAATTGACATGGATGACTTGGGTGAGAACCAGCTTCTTAATATCGACCAACCACTCGCAAACTCACATAACCTTGCTAAGGATTCGGAAGACATCGACGTACTTGGCCGAGAGGCATTGCTTAACCACCAAACACTTGTCCCGGTACGAGGAACTCAAAGCAGTTCAACCTTGGAGTTGGTTCTTCTCAATCCAACTGAACCAAATCCTTCCATGTCCGGAACGCTTACCACCTTTCTTACTGAAGGGATGCCTCGAAATGATCAAGCTATCATTTGCGCCCCATTGTCGGCTGAGCCTGTGGATCAAACAACAGGCGATCTTGGTCTGGAGCTACTTCAATTTCTCGACACACTAGATAACAACATGAGCCCGGTGGAGGAAAAGCTTGAAACAACCGAAACCAAGAAGGCACTAAAATCGGTCAGACAATTTTTGGGTTATGATACGAGAGCAGTAACCGAGGCTAGTTTTCTTGCTTTCAAGGAGGCGGTTGAAGTACTTATTTCAGCCAACCATTTATCTCAAGTAGAAGCTTATGAAGTTCATGCCCTTTTGTCCCGCGCAAATTTTAGTCTCTCTCCCTGCCTAGAAGCCCAAAAAGAGTTTGAAACCGGCGAGAAATTTATGAGTGAGTATAAAGACATTCGCCAGTCTACCGATCTTGGCCAACTTCATAAGTTGAAGACTTCTTTGGATGAGGGAAGGCAAAAAGTGCGTGATTTGAAAAAGCAATTGGTCGAAGCTGAAGAGCAAGTCAAAATCACTTCGGCCTCCATCCGAACCATTGTTCCTCAACAACATCTCACTAGGTATAGCTTGATTTTGTCATCGGTCAAGTCGTACAACAAGAAGAAATGCATTTTGAAGCGAAAGGTCGACCAAGGTATGGAAGACTTGGAAAAGGTTAAGGAAGTTCTTCGATCTCTTCTACCCTCTGACTAG

Protein Analysis

993

Amino Acids

111.46

Weight (kDa)

5.92

Isoelectric Point (pI)

44.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 131 - 513 7.3e-43 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000063)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21382 FvH4_1g29794 FvH4_1g29795 FvH4_2g35573 FvH4_2g35574 FvH4_4g18552 FvH4_5g16044
malus_domestica MD05G1017000.v1.1
prunus_persica Prupe.3G140800_v2.0.a1 Prupe.6G164100_v2.0.a1
pyrus_communis pycom01g04330 pycom03g19820 pycom04g06720 pycom06g11360 pycom06g19000 pycom10g08100 pycom13g16660 pycom13g27590 pycom13g27640 pycom13g27890 pycom16g11770 pycom16g19530
rosa_chinensis RchiOBHm_Chr1g0317341 RchiOBHm_Chr1g0317351 RchiOBHm_Chr1g0320431 RchiOBHm_Chr1g0320711 RchiOBHm_Chr1g0320721 RchiOBHm_Chr1g0321611 RchiOBHm_Chr1g0321621 RchiOBHm_Chr1g0321631 RchiOBHm_Chr1g0323651 RchiOBHm_Chr1g0332991 RchiOBHm_Chr1g0333001 RchiOBHm_Chr1g0335981 RchiOBHm_Chr1g0335991 RchiOBHm_Chr1g0336001 RchiOBHm_Chr1g0350201 RchiOBHm_Chr1g0368201 RchiOBHm_Chr2g0105531 RchiOBHm_Chr2g0105541 RchiOBHm_Chr2g0116571 RchiOBHm_Chr2g0116581 RchiOBHm_Chr2g0121071 RchiOBHm_Chr2g0131351 RchiOBHm_Chr2g0131661 RchiOBHm_Chr2g0133021 RchiOBHm_Chr2g0138181 RchiOBHm_Chr2g0138191 RchiOBHm_Chr2g0142701 RchiOBHm_Chr2g0142711 RchiOBHm_Chr2g0152981 RchiOBHm_Chr3g0456181 RchiOBHm_Chr3g0456191 RchiOBHm_Chr3g0493631 RchiOBHm_Chr3g0496201 RchiOBHm_Chr4g0401541 RchiOBHm_Chr4g0410311 RchiOBHm_Chr4g0410321 RchiOBHm_Chr4g0419231 RchiOBHm_Chr4g0419511 RchiOBHm_Chr4g0419521 RchiOBHm_Chr5g0004311 RchiOBHm_Chr5g0004321 RchiOBHm_Chr5g0038131 RchiOBHm_Chr5g0038251 RchiOBHm_Chr5g0038261 RchiOBHm_Chr5g0038271 RchiOBHm_Chr5g0052241 RchiOBHm_Chr5g0053911 RchiOBHm_Chr5g0074641 RchiOBHm_Chr5g0076651 RchiOBHm_Chr5g0076661 RchiOBHm_Chr6g0249161 RchiOBHm_Chr6g0249171 RchiOBHm_Chr6g0250961 RchiOBHm_Chr6g0253701 RchiOBHm_Chr6g0262131 RchiOBHm_Chr6g0263181 RchiOBHm_Chr6g0263231 RchiOBHm_Chr6g0263241 RchiOBHm_Chr6g0263251 RchiOBHm_Chr6g0291271 RchiOBHm_Chr7g0194611 RchiOBHm_Chr7g0219691 RchiOBHm_Chr7g0219701 RchiOBHm_Chr7g0225431 RchiOBHm_Chr7g0234221 RchiOBHm_Chr7g0238711 RchiOBHm_Chr7g0238721 RchiOBHm_Chr7g0238731 RchiOBHm_Chr7g0239611 RchiOBHm_Chr7g0239621
rosa_laevigata RLG00000001361 RLG00000001376 RLG00000001860 RLG00000002051 RLG00000002362 RLG00000008940 RLG00000012764 RLG00000018782 RLG00000029639 RLG00000030151
rosa_multiflora Rmu_co8090794.1_g000001 Rmu_co8135356.1_g000001 Rmu_co8224968.1_g000001 Rmu_sc0000016.1_g000020 Rmu_sc0000029.1_g000061 Rmu_sc0000035.1_g000032 Rmu_sc0000060.1_g000041 Rmu_sc0000148.1_g000041 Rmu_sc0000315.1_g000084 Rmu_sc0000527.1_g000005 Rmu_sc0000527.1_g000007 Rmu_sc0000527.1_g000008 Rmu_sc0000648.1_g000002 Rmu_sc0000762.1_g000076 Rmu_sc0000870.1_g000003 Rmu_sc0000870.1_g000004 Rmu_sc0000948.1_g000037 Rmu_sc0000997.1_g000003 Rmu_sc0001047.1_g000041 Rmu_sc0001047.1_g000042 Rmu_sc0001075.1_g000044 Rmu_sc0001174.1_g000006 Rmu_sc0001235.1_g000025 Rmu_sc0001292.1_g000008 Rmu_sc0001301.1_g000038 Rmu_sc0001461.1_g000069 Rmu_sc0001461.1_g000070 Rmu_sc0001669.1_g000041 Rmu_sc0001689.1_g000027 Rmu_sc0001896.1_g000008 Rmu_sc0001909.1_g000013 Rmu_sc0002170.1_g000038 Rmu_sc0002200.1_g000014 Rmu_sc0002283.1_g000027 Rmu_sc0002284.1_g000014 Rmu_sc0002294.1_g000017 Rmu_sc0002294.1_g000018 Rmu_sc0002307.1_g000020 Rmu_sc0002307.1_g000021 Rmu_sc0002307.1_g000023 Rmu_sc0002357.1_g000054 Rmu_sc0002409.1_g000005 Rmu_sc0002535.1_g000002 Rmu_sc0002589.1_g000014 Rmu_sc0002759.1_g000016 Rmu_sc0002759.1_g000017 Rmu_sc0002777.1_g000015 Rmu_sc0002824.1_g000016 Rmu_sc0002872.1_g000005 Rmu_sc0002872.1_g000012 Rmu_sc0002872.1_g000013 Rmu_sc0002942.1_g000019 Rmu_sc0003337.1_g000001 Rmu_sc0003410.1_g000052 Rmu_sc0003445.1_g000010 Rmu_sc0003773.1_g000007 Rmu_sc0003773.1_g000008 Rmu_sc0003895.1_g000002 Rmu_sc0004063.1_g000006 Rmu_sc0004088.1_g000009 Rmu_sc0004088.1_g000010 Rmu_sc0004174.1_g000027 Rmu_sc0004196.1_g000010 Rmu_sc0004515.1_g000006 Rmu_sc0004727.1_g000010 Rmu_sc0004755.1_g000018 Rmu_sc0005016.1_g000030 Rmu_sc0005026.1_g000001 Rmu_sc0005044.1_g000007 Rmu_sc0005284.1_g000001 Rmu_sc0005431.1_g000030 Rmu_sc0005802.1_g000014 Rmu_sc0005802.1_g000015 Rmu_sc0005994.1_g000004 Rmu_sc0005994.1_g000005 Rmu_sc0006059.1_g000048 Rmu_sc0006583.1_g000013 Rmu_sc0006824.1_g000009 Rmu_sc0007458.1_g000005 Rmu_sc0007707.1_g000002 Rmu_sc0008242.1_g000012 Rmu_sc0008713.1_g000006 Rmu_sc0008770.1_g000008 Rmu_sc0009785.1_g000004 Rmu_sc0009785.1_g000005 Rmu_sc0010125.1_g000001 Rmu_sc0010211.1_g000004 Rmu_sc0011034.1_g000001 Rmu_sc0011833.1_g000006 Rmu_sc0014851.1_g000001 Rmu_sc0014899.1_g000001 Rmu_sc0015060.1_g000003 Rmu_sc0015186.1_g000001 Rmu_sc0015248.1_g000003 Rmu_sc0015248.1_g000004 Rmu_sc0015314.1_g000001 Rmu_sc0018098.1_g000002 Rmu_sc0022706.1_g000004 Rmu_sc0023350.1_g000002 Rmu_sc0027636.1_g000001 Rmu_sc0027672.1_g000003 Rmu_sc0030879.1_g000001 Rmu_ssc0000008.1_g000029 Rmu_ssc0000019.1_g000014 Rmu_ssc0000050.1_g000082 Rmu_ssc0000282.1_g000004 Rmu_ssc0000311.1_g000010
rosa_roxburghii Rroxscaffold_1G00015190 Rroxscaffold_1G00031880 Rroxscaffold_1G00031890 Rroxscaffold_1G00059310 Rroxscaffold_1G00060420 Rroxscaffold_1G00067930 Rroxscaffold_1G00075030 Rroxscaffold_2G00082210 Rroxscaffold_2G00122970 Rroxscaffold_3G00218230 Rroxscaffold_3G00219020 Rroxscaffold_3G00219030 Rroxscaffold_3G00223680 Rroxscaffold_3G00223690 Rroxscaffold_3G00223700 Rroxscaffold_3G00226870 Rroxscaffold_3G00226880 Rroxscaffold_3G00232990 Rroxscaffold_3G00265610 Rroxscaffold_3G00265620 Rroxscaffold_3G00265630 Rroxscaffold_4G00318660 Rroxscaffold_4G00319060 Rroxscaffold_4G00323500 Rroxscaffold_5G00357520 Rroxscaffold_5G00366150 Rroxscaffold_5G00377470 Rroxscaffold_6G00395700 Rroxscaffold_6G00413950 Rroxscaffold_7G00187650 Rroxscaffold_7G00198290 Rroxscaffold_7G00198300 Rroxscaffold_7G00208060
rosa_rugosa Rorug01G0173900 Rorug01G0174000 Rorug01G0174100 Rorug01G0174100 Rorug02G0341200 Rorug04G0135700 Rorug04G0135800 Rorug05G0032500 Rorug06G0021800
rosa_samantha Rh1AG036600 Rh1AG245800 Rh1CG021700 Rh1CG021800 Rh1CG085800 Rh1CG085900 Rh1CG187900 Rh1CG229600 Rh1CG239600 Rh1CG246500 Rh1CG246600 Rh2BG478100 Rh2DG341300 Rh2DG366600 Rh2DG375700 Rh2DG384300 Rh2DG487000 Rh2DG504000 Rh2DG504100 Rh3AG311800 Rh3AG327500 Rh3AG328300 Rh3BG345100 Rh3CG320100 Rh4AG005700 Rh4AG067900 Rh4AG068000 Rh4AG084400 Rh4AG106700 Rh4AG160000 Rh4AG173900 Rh4AG174000 Rh4CG125300 Rh4CG125500 Rh4CG264500 Rh4DG110800 Rh5AG047300 Rh5AG085200 Rh5AG126300 Rh5AG127300 Rh5AG203000 Rh5AG332400 Rh5AG332500 Rh5AG342400 Rh5AG344100 Rh5AG375600 Rh5AG378300 Rh5AG386000 Rh5AG529600 Rh5BG125200 Rh5CG137600 Rh5CG137700 Rh5DG125200 Rh6BG134100 Rh6BG175400 Rh6BG179500 Rh6BG179600 Rh6BG181600 Rh6BG181700 Rh6BG191100 Rh6BG232900 Rh6BG259700 Rh6BG259800 Rh7AG028000 Rh7AG319400 Rh7AG352700 Rh7AG352800 Rh7AG352900 Rh7AG482500 Rh7AG482600 Rh7AG503800 Rh7BG334700 Rh7CG200100 Rh7CG336200 Rh7CG370200 Rh7CG370400 Rh7CG370500
rosa_wichuraiana Rw1G001580 Rw1G003570 Rw1G004260 Rw1G004270 Rw1G021170 Rw2G019390 Rw2G040280 Rw2G044050 Rw4G004430 Rw5G010950 Rw5G018350 Rw5G032890 Rw6G002840 Rw6G006510 Rw6G007780 Rw6G033790 Rw7G036320 Rw7G040550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 504
AccB1I GGYRCC 1 cut(s) 346
AccB7I CCANNNNNTGG 1 cut(s) 2926
AccI GTMKAC 2 cut(s) 2693, 2916
AccII CGCG 5 cut(s) 163, 1333, 1424, 1766, 2601
AccIII TCCGGA 1 cut(s) 2255
AclWI GGATC 2 cut(s) 444, 2349
AcsI RAATTY 5 cut(s) 71, 292, 386, 2605, 2660
AcuI CTGAAG 2 cut(s) 2301, 2805
AcyI GRCGYC 1 cut(s) 663
AfaI GTAC 7 cut(s) 916, 1227, 1285, 2139, 2184, 2538, 2882
AfiI CCNNNNNNNGG 8 cut(s) 672, 865, 985, 2116, 2186, 2326, 2416, 2926
AflIII ACRYGT 1 cut(s) 801
AhlI ACTAGT 1 cut(s) 1901
AjnI CCWGG 3 cut(s) 304, 978, 1297
AjuI GAANNNNNNNTTGG 4 cut(s) 2714, 2746, 2756, 2788
AleI CACNNNNGTG 1 cut(s) 331
AloI GAACNNNNNNTCC 2 cut(s) 2812, 2844
Alw21I GWGCWC 4 cut(s) 363, 768, 1732, 1983
Alw26I GTCTC 6 cut(s) 20, 610, 1155, 1254, 1280, 2618
AlwI GGATC 2 cut(s) 444, 2349
AlwNI CAGNNNCTG 1 cut(s) 23
Ama87I CYCGRG 4 cut(s) 329, 503, 1257, 1609
Aor13HI TCCGGA 1 cut(s) 2255
ApeKI GCWGC 3 cut(s) 92, 452, 455
ApoI RAATTY 5 cut(s) 71, 292, 386, 2605, 2660
ArsI GACNNNNNNTTYG 2 cut(s) 1805, 1837
Asp700I GAANNNNTTC 1 cut(s) 2955
AspLEI GCGC 5 cut(s) 1333, 1426, 1493, 2318, 2603
AspS9I GGNCC 6 cut(s) 182, 506, 856, 887, 962, 1070
AsuC2I CCSGG 3 cut(s) 1381, 2180, 2411
AsuHPI GGTGA 5 cut(s) 943, 1612, 1749, 1841, 2072
AsuII TTCGAA 1 cut(s) 1115
AsuNHI GCTAGC 2 cut(s) 269, 608
AvaI CYCGRG 4 cut(s) 329, 503, 1257, 1609
AvaII GGWCC 3 cut(s) 182, 887, 1070
BalI TGGCCA 1 cut(s) 2706
BanI GGYRCC 1 cut(s) 346
BanII GRGCYC 3 cut(s) 1732, 1931, 2411
BauI CACGAG 1 cut(s) 1982
BbsI GAAGAC 4 cut(s) 1818, 2133, 2729, 2937
Bbv12I GWGCWC 4 cut(s) 363, 768, 1732, 1983
BbvCI CCTCAGC 1 cut(s) 1884
BbvI GCAGC 3 cut(s) 79, 439, 442
BccI CCATC 3 cut(s) 221, 349, 2822
BceAI ACGGC 1 cut(s) 1421
BcgI CGANNNNNNTGC 8 cut(s) 153, 187, 661, 695, 1574, 1608, 2439, 2473
BciT130I CCWGG 3 cut(s) 306, 980, 1299
BclI TGATCA 3 cut(s) 1504, 2002, 2299
BcnI CCSGG 3 cut(s) 1381, 2180, 2411
BcoDI GTCTC 6 cut(s) 20, 610, 1155, 1254, 1280, 2618
BcuI ACTAGT 1 cut(s) 1901
BfmI CTRYAG 1 cut(s) 688
BfoI RGCGCY 1 cut(s) 1494
BfuAI ACCTGC 1 cut(s) 504
BglI GCCNNNNNGGC 1 cut(s) 505
BisI GCNGC 7 cut(s) 93, 206, 453, 456, 537, 771, 1051
BlpI GCTNAGC 1 cut(s) 2331
BlsI GCNGC 7 cut(s) 94, 207, 454, 457, 538, 772, 1052
BmcAI AGTACT 2 cut(s) 1227, 2538
Bme1390I CCNGG 6 cut(s) 306, 980, 1299, 1381, 2180, 2411
Bme18I GGWCC 3 cut(s) 182, 887, 1070
BmeT110I CYCGRG 4 cut(s) 329, 503, 1257, 1609
BmgT120I GGNCC 6 cut(s) 182, 506, 856, 887, 962, 1070
BmiI GGNNCC 2 cut(s) 159, 348
BmrFI CCNGG 6 cut(s) 306, 980, 1299, 1381, 2180, 2411
BmrI ACTGGG 1 cut(s) 1298
BmsI GCATC 2 cut(s) 2023, 2277
BmtI GCTAGC 2 cut(s) 273, 612
BmuI ACTGGG 1 cut(s) 1298
BpiI GAAGAC 4 cut(s) 1818, 2133, 2729, 2937
BplI GAGNNNNNCTC 2 cut(s) 1682, 1714
BpmI CTGGAG 2 cut(s) 1899, 2387
Bpu10I CCTNAGC 5 cut(s) 580, 860, 1487, 1884, 2115
Bpu1102I GCTNAGC 1 cut(s) 2331
Bpu14I TTCGAA 1 cut(s) 1115
BpuEI CTTGAG 2 cut(s) 1262, 2547
BpuMI CCSGG 3 cut(s) 1381, 2180, 2411
BsaAI YACGTR 1 cut(s) 802
BsaHI GRCGYC 1 cut(s) 663
BsaI GGTCTC 2 cut(s) 610, 1280
BsaWI WCCGGW 1 cut(s) 2255
Bsc4I CCNNNNNNNGG 8 cut(s) 672, 865, 985, 2116, 2186, 2326, 2416, 2926
Bse118I RCCGGY 3 cut(s) 208, 260, 2651
Bse1I ACTGG 4 cut(s) 954, 1293, 1656, 2689
Bse3DI GCAATG 2 cut(s) 1639, 2153
BseAI TCCGGA 1 cut(s) 2255
BseBI CCWGG 3 cut(s) 306, 980, 1299
BseLI CCNNNNNNNGG 8 cut(s) 672, 865, 985, 2116, 2186, 2326, 2416, 2926
BseMI GCAATG 2 cut(s) 1639, 2153
BseMII CTCAG 6 cut(s) 15, 605, 1472, 1478, 1875, 2322
BseNI ACTGG 4 cut(s) 954, 1293, 1656, 2689
BseRI GAGGAG 1 cut(s) 581
BseX3I CGGCCG 4 cut(s) 554, 1048, 1434, 1932
BseXI GCAGC 3 cut(s) 79, 439, 442
BsgI GTGCAG 1 cut(s) 1010
Bsh1236I CGCG 5 cut(s) 163, 1333, 1424, 1766, 2601
Bsh1285I CGRYCG 6 cut(s) 373, 557, 738, 1051, 1437, 1935
BshNI GGYRCC 1 cut(s) 346
BsiEI CGRYCG 6 cut(s) 373, 557, 738, 1051, 1437, 1935
BsiHKAI GWGCWC 4 cut(s) 363, 768, 1732, 1983
BsiHKCI CYCGRG 4 cut(s) 329, 503, 1257, 1609
BsiSI CCGG 8 cut(s) 209, 261, 1381, 1790, 2180, 2256, 2411, 2652
BslFI GGGAC 3 cut(s) 1363, 2162, 2581
BslI CCNNNNNNNGG 8 cut(s) 672, 865, 985, 2116, 2186, 2326, 2416, 2926
BsmAI GTCTC 6 cut(s) 20, 610, 1155, 1254, 1280, 2618
BsmBI CGTCTC 1 cut(s) 20
BsmFI GGGAC 3 cut(s) 1363, 2162, 2581
BsmI GAATGC 2 cut(s) 1100, 1245
Bso31I GGTCTC 2 cut(s) 610, 1280
BsoBI CYCGRG 4 cut(s) 329, 503, 1257, 1609
Bsp119I TTCGAA 1 cut(s) 1115
Bsp1286I GDGCHC 6 cut(s) 363, 768, 1732, 1931, 1983, 2411
Bsp13I TCCGGA 1 cut(s) 2255
Bsp143I GATC 9 cut(s) 436, 1056, 1504, 2002, 2299, 2341, 2356, 2698, 2960
Bsp1720I GCTNAGC 1 cut(s) 2331
Bsp19I CCATGG 1 cut(s) 1199
BspCNI CTCAG 6 cut(s) 16, 606, 1471, 1479, 1876, 2323
BspEI TCCGGA 1 cut(s) 2255
BspFNI CGCG 5 cut(s) 163, 1333, 1424, 1766, 2601
BspLI GGNNCC 2 cut(s) 159, 348
BspMI ACCTGC 1 cut(s) 504
BspOI GCTAGC 2 cut(s) 273, 612
BspPI GGATC 2 cut(s) 444, 2349
BspQI GCTCTTC 3 cut(s) 1683, 1720, 2781
BspT104I TTCGAA 1 cut(s) 1115
BspT107I GGYRCC 1 cut(s) 346
BspTNI GGTCTC 2 cut(s) 610, 1280
BsrDI GCAATG 2 cut(s) 1639, 2153
BsrFI RCCGGY 3 cut(s) 208, 260, 2651
BsrI ACTGG 4 cut(s) 954, 1293, 1656, 2689
BssAI RCCGGY 3 cut(s) 208, 260, 2651
BssMI GATC 9 cut(s) 436, 1056, 1504, 2002, 2299, 2341, 2356, 2698, 2960
BssNI GRCGYC 1 cut(s) 663
BssSI CACGAG 1 cut(s) 1982
BssT1I CCWWGG 7 cut(s) 883, 1131, 1199, 1235, 1683, 2208, 2920
Bst2BI CACGAG 1 cut(s) 1982
Bst2UI CCWGG 3 cut(s) 306, 980, 1299
Bst4CI ACNGT 4 cut(s) 736, 914, 1039, 1965
Bst6I CTCTTC 7 cut(s) 160, 450, 1131, 1683, 1720, 2781, 2970
BstACI GRCGYC 1 cut(s) 663
BstAPI GCANNNNNTGC 2 cut(s) 1655, 2752
BstBAI YACGTR 1 cut(s) 802
BstBI TTCGAA 1 cut(s) 1115
BstC8I GCNNGC 4 cut(s) 210, 271, 610, 768
BstDEI CTNAG 9 cut(s) 24, 580, 614, 860, 1458, 1487, 1884, 2115, 2331
BstDSI CCRYGG 3 cut(s) 350, 732, 1199
BstEII GGTNACC 1 cut(s) 931
BstENI CCTNNNNNAGG 1 cut(s) 2114
BstFNI CGCG 5 cut(s) 163, 1333, 1424, 1766, 2601
BstH2I RGCGCY 1 cut(s) 1494
BstHHI GCGC 5 cut(s) 1333, 1426, 1493, 2318, 2603
BstKTI GATC 9 cut(s) 439, 1059, 1507, 2005, 2302, 2344, 2359, 2701, 2963
BstMAI GTCTC 6 cut(s) 20, 610, 1155, 1254, 1280, 2618
BstMBI GATC 9 cut(s) 436, 1056, 1504, 2002, 2299, 2341, 2356, 2698, 2960
BstMCI CGRYCG 6 cut(s) 373, 557, 738, 1051, 1437, 1935
BstMWI GCNNNNNNNGC 9 cut(s) 65, 101, 261, 270, 505, 710, 848, 1655, 2752
BstNI CCWGG 3 cut(s) 306, 980, 1299
BstNSI RCATGY 1 cut(s) 713
BstPI GGTNACC 1 cut(s) 931
BstSCI CCNGG 6 cut(s) 304, 978, 1297, 1379, 2178, 2409
BstSFI CTRYAG 1 cut(s) 688
BstUI CGCG 5 cut(s) 163, 1333, 1424, 1766, 2601
BstV1I GCAGC 3 cut(s) 79, 439, 442
BstV2I GAAGAC 4 cut(s) 1818, 2133, 2729, 2937
BstXI CCANNNNNNTGG 1 cut(s) 312
BstZI CGGCCG 4 cut(s) 554, 1048, 1434, 1932
BtgI CCRYGG 3 cut(s) 350, 732, 1199
BtsIMutI CAGTG 4 cut(s) 947, 1035, 1286, 1649
BveI ACCTGC 1 cut(s) 504
Cac8I GCNNGC 4 cut(s) 210, 271, 610, 768
CaiI CAGNNNCTG 1 cut(s) 23
CfoI GCGC 5 cut(s) 1333, 1426, 1493, 2318, 2603
Cfr10I RCCGGY 3 cut(s) 208, 260, 2651
Cfr13I GGNCC 6 cut(s) 182, 506, 856, 887, 962, 1070
CseI GACGC 3 cut(s) 671, 1322, 1772
Csp6I GTAC 7 cut(s) 915, 1226, 1284, 2138, 2183, 2537, 2881
CspCI CAANNNNNGTGG 2 cut(s) 1517, 1552
CviQI GTAC 7 cut(s) 915, 1226, 1284, 2138, 2183, 2537, 2881
DdeI CTNAG 9 cut(s) 24, 580, 614, 860, 1458, 1487, 1884, 2115, 2331
DpnI GATC 9 cut(s) 438, 1058, 1506, 2004, 2301, 2343, 2358, 2700, 2962
DpnII GATC 9 cut(s) 436, 1056, 1504, 2002, 2299, 2341, 2356, 2698, 2960
EagI CGGCCG 4 cut(s) 554, 1048, 1434, 1932
Eam1104I CTCTTC 7 cut(s) 160, 450, 1131, 1683, 1720, 2781, 2970
EarI CTCTTC 7 cut(s) 160, 450, 1131, 1683, 1720, 2781, 2970
EciI GGCGGA 1 cut(s) 279
Ecl136II GAGCTC 1 cut(s) 1730
EclXI CGGCCG 4 cut(s) 554, 1048, 1434, 1932
Eco130I CCWWGG 7 cut(s) 883, 1131, 1199, 1235, 1683, 2208, 2920
Eco24I GRGCYC 3 cut(s) 1732, 1931, 2411
Eco31I GGTCTC 2 cut(s) 610, 1280
Eco47I GGWCC 3 cut(s) 182, 887, 1070
Eco52I CGGCCG 4 cut(s) 554, 1048, 1434, 1932
Eco53kI GAGCTC 1 cut(s) 1730
Eco57I CTGAAG 2 cut(s) 2301, 2805
Eco88I CYCGRG 4 cut(s) 329, 503, 1257, 1609
Eco91I GGTNACC 1 cut(s) 931
EcoICRI GAGCTC 1 cut(s) 1730
EcoNI CCTNNNNNAGG 1 cut(s) 2114
EcoO109I RGGNCCY 1 cut(s) 856
EcoO65I GGTNACC 1 cut(s) 931
EcoRI GAATTC 1 cut(s) 71
EcoRII CCWGG 3 cut(s) 304, 978, 1297
EcoT14I CCWWGG 7 cut(s) 883, 1131, 1199, 1235, 1683, 2208, 2920
EcoT22I ATGCAT 1 cut(s) 2900
EcoT38I GRGCYC 3 cut(s) 1732, 1931, 2411
ErhI CCWWGG 7 cut(s) 883, 1131, 1199, 1235, 1683, 2208, 2920
Esp3I CGTCTC 1 cut(s) 20
FalI AAGNNNNNCTT 2 cut(s) 1009, 1041
FaqI GGGAC 3 cut(s) 1363, 2162, 2581
FauI CCCGC 1 cut(s) 2606
FauNDI CATATG 1 cut(s) 1148
FbaI TGATCA 3 cut(s) 1504, 2002, 2299
FblI GTMKAC 2 cut(s) 2693, 2916
Fnu4HI GCNGC 7 cut(s) 93, 206, 453, 456, 537, 771, 1051
FriOI GRGCYC 3 cut(s) 1732, 1931, 2411
Fsp4HI GCNGC 7 cut(s) 93, 206, 453, 456, 537, 771, 1051
GlaI GCGC 5 cut(s) 1332, 1425, 1492, 2317, 2602
GluI GCNGC 7 cut(s) 93, 206, 453, 456, 537, 771, 1051
GsuI CTGGAG 2 cut(s) 1899, 2387
HaeII RGCGCY 1 cut(s) 1494
HapII CCGG 8 cut(s) 209, 261, 1381, 1790, 2180, 2256, 2411, 2652
HgaI GACGC 3 cut(s) 671, 1322, 1772
HhaI GCGC 5 cut(s) 1333, 1426, 1493, 2318, 2603
Hin1I GRCGYC 1 cut(s) 663
Hin6I GCGC 5 cut(s) 1331, 1424, 1491, 2316, 2601
HinP1I GCGC 5 cut(s) 1331, 1424, 1491, 2316, 2601
HincII GTYRAC 3 cut(s) 144, 1542, 2917
HindII GTYRAC 3 cut(s) 144, 1542, 2917
HindIII AAGCTT 2 cut(s) 2423, 2571
HpaII CCGG 8 cut(s) 209, 261, 1381, 1790, 2180, 2256, 2411, 2652
HphI GGTGA 5 cut(s) 943, 1612, 1749, 1841, 2072
Hpy188I TCNGA 8 cut(s) 19, 418, 1455, 1969, 2125, 2465, 2819, 2977
Hpy99I CGWCG 1 cut(s) 2138
HpyCH4III ACNGT 4 cut(s) 736, 914, 1039, 1965
HpyCH4IV ACGT 2 cut(s) 801, 2136
HpyCH4V TGCA 7 cut(s) 174, 713, 795, 810, 991, 1181, 2898
HpyF10VI GCNNNNNNNGC 9 cut(s) 65, 101, 261, 270, 505, 710, 848, 1655, 2752
HpyF3I CTNAG 9 cut(s) 24, 580, 614, 860, 1458, 1487, 1884, 2115, 2331
HpySE526I ACGT 2 cut(s) 801, 2136
Hsp92I GRCGYC 1 cut(s) 663
HspAI GCGC 5 cut(s) 1331, 1424, 1491, 2316, 2601
Kpn2I TCCGGA 1 cut(s) 2255
KroI GCCGGC 1 cut(s) 208
KroNI GCCGGC 1 cut(s) 210
Ksp22I TGATCA 3 cut(s) 1504, 2002, 2299
Kzo9I GATC 9 cut(s) 436, 1056, 1504, 2002, 2299, 2341, 2356, 2698, 2960
LguI GCTCTTC 3 cut(s) 1683, 1720, 2781
LmnI GCTCC 5 cut(s) 266, 358, 1242, 1880, 2368
Lsp1109I GCAGC 3 cut(s) 79, 439, 442
LweI GCATC 2 cut(s) 2023, 2277
MaeII ACGT 2 cut(s) 801, 2136
MaeIII GTNAC 5 cut(s) 931, 1438, 1755, 1780, 2494
MalI GATC 9 cut(s) 438, 1058, 1506, 2004, 2301, 2343, 2358, 2700, 2962
MboI GATC 9 cut(s) 436, 1056, 1504, 2002, 2299, 2341, 2356, 2698, 2960
MfeI CAATTG 3 cut(s) 62, 714, 2771
MhlI GDGCHC 6 cut(s) 363, 768, 1732, 1931, 1983, 2411
MlsI TGGCCA 1 cut(s) 2706
MluNI TGGCCA 1 cut(s) 2706
MlyI GAGTC 2 cut(s) 523, 1450
MmeI TCCRAC 3 cut(s) 263, 542, 2255
Mox20I TGGCCA 1 cut(s) 2706
Mph1103I ATGCAT 1 cut(s) 2900
MroI TCCGGA 1 cut(s) 2255
MroNI GCCGGC 1 cut(s) 208
MroXI GAANNNNTTC 1 cut(s) 2955
MscI TGGCCA 1 cut(s) 2706
MseI TTAA 6 cut(s) 408, 684, 1184, 2076, 2160, 2946
MslI CAYNNNNRTG 2 cut(s) 331, 410
Msp20I TGGCCA 1 cut(s) 2706
MspA1I CMGCKG 1 cut(s) 1941
MspI CCGG 8 cut(s) 209, 261, 1381, 1790, 2180, 2256, 2411, 2652
MspR9I CCNGG 6 cut(s) 306, 980, 1299, 1381, 2180, 2411
MunI CAATTG 3 cut(s) 62, 714, 2771
Mva1269I GAATGC 2 cut(s) 1100, 1245
MvaI CCWGG 3 cut(s) 306, 980, 1299
MvnI CGCG 5 cut(s) 163, 1333, 1424, 1766, 2601
MwoI GCNNNNNNNGC 9 cut(s) 65, 101, 261, 270, 505, 710, 848, 1655, 2752
NaeI GCCGGC 1 cut(s) 210
NciI CCSGG 3 cut(s) 1381, 2180, 2411
NcoI CCATGG 1 cut(s) 1199
NdeI CATATG 1 cut(s) 1148
NdeII GATC 9 cut(s) 436, 1056, 1504, 2002, 2299, 2341, 2356, 2698, 2960
NgoMIV GCCGGC 1 cut(s) 208
NheI GCTAGC 2 cut(s) 269, 608
NlaIV GGNNCC 2 cut(s) 159, 348
NmeAIII GCCGAG 5 cut(s) 745, 1026, 1184, 1910, 2171
NmuCI GTSAC 3 cut(s) 931, 1755, 1780
NsiI ATGCAT 1 cut(s) 2900
NspI RCATGY 1 cut(s) 713
NspV TTCGAA 1 cut(s) 1115
OliI CACNNNNGTG 1 cut(s) 331
PaeR7I CTCGAG 1 cut(s) 1257
PciSI GCTCTTC 3 cut(s) 1683, 1720, 2781
PcsI WCGNNNNNNNCGW 2 cut(s) 744, 2876
PctI GAATGC 2 cut(s) 1100, 1245
PdiI GCCGGC 1 cut(s) 210
PdmI GAANNNNTTC 1 cut(s) 2955
PfeI GAWTC 8 cut(s) 1031, 1042, 1384, 1479, 1605, 1712, 1786, 2120
PflFI GACNNNGTC 1 cut(s) 1017
PflMI CCANNNNNTGG 1 cut(s) 2926
PfoI TCCNGGA 1 cut(s) 1379
PkrI GCNGC 7 cut(s) 94, 207, 454, 457, 538, 772, 1052
PleI GAGTC 2 cut(s) 522, 1450
PpsI GAGTC 2 cut(s) 522, 1450
Ppu21I YACGTR 1 cut(s) 802
Psp124BI GAGCTC 1 cut(s) 1732
Psp6I CCWGG 3 cut(s) 304, 978, 1297
PspEI GGTNACC 1 cut(s) 931
PspGI CCWGG 3 cut(s) 304, 978, 1297
PspN4I GGNNCC 2 cut(s) 159, 348
PspPI GGNCC 6 cut(s) 182, 506, 856, 887, 962, 1070
PstNI CAGNNNCTG 1 cut(s) 23
PsyI GACNNNGTC 1 cut(s) 1017
RsaI GTAC 7 cut(s) 916, 1227, 1285, 2139, 2184, 2538, 2882
RsaNI GTAC 7 cut(s) 915, 1226, 1284, 2138, 2183, 2537, 2881
RseI CAYNNNNRTG 2 cut(s) 331, 410
SacI GAGCTC 1 cut(s) 1732
SalI GTCGAC 1 cut(s) 2915
SapI GCTCTTC 3 cut(s) 1683, 1720, 2781
SaqAI TTAA 6 cut(s) 408, 684, 1184, 2076, 2160, 2946
SatI GCNGC 7 cut(s) 93, 206, 453, 456, 537, 771, 1051
Sau3AI GATC 9 cut(s) 436, 1056, 1504, 2002, 2299, 2341, 2356, 2698, 2960
Sau96I GGNCC 6 cut(s) 182, 506, 856, 887, 962, 1070
ScaI AGTACT 2 cut(s) 1227, 2538
SchI GAGTC 2 cut(s) 523, 1450
ScrFI CCNGG 6 cut(s) 306, 980, 1299, 1381, 2180, 2411
SduI GDGCHC 6 cut(s) 363, 768, 1732, 1931, 1983, 2411
SfaNI GCATC 2 cut(s) 2023, 2277
SfcI CTRYAG 1 cut(s) 688
Sfr274I CTCGAG 1 cut(s) 1257
SfuI TTCGAA 1 cut(s) 1115
SinI GGWCC 3 cut(s) 182, 887, 1070
SlaI CTCGAG 1 cut(s) 1257
SmiMI CAYNNNNRTG 2 cut(s) 331, 410
SmlI CTYRAG 3 cut(s) 1257, 1277, 2562
SmoI CTYRAG 3 cut(s) 1257, 1277, 2562
SpeI ACTAGT 1 cut(s) 1901
SspI AATATT 1 cut(s) 543
SstI GAGCTC 1 cut(s) 1732
StyD4I CCNGG 6 cut(s) 304, 978, 1297, 1379, 2178, 2409
StyI CCWWGG 7 cut(s) 883, 1131, 1199, 1235, 1683, 2208, 2920
TaaI ACNGT 4 cut(s) 736, 914, 1039, 1965
TaiI ACGT 2 cut(s) 804, 2139
TaqII GACCGA 4 cut(s) 359, 1768, 2449, 2860
TatI WGTACW 2 cut(s) 1225, 2536
TauI GCSGC 4 cut(s) 208, 539, 773, 1053
TfiI GAWTC 8 cut(s) 1031, 1042, 1384, 1479, 1605, 1712, 1786, 2120
Tru1I TTAA 6 cut(s) 408, 684, 1184, 2076, 2160, 2946
Tru9I TTAA 6 cut(s) 408, 684, 1184, 2076, 2160, 2946
TscAI CASTG 4 cut(s) 954, 1042, 1293, 1656
TseFI GTSAC 3 cut(s) 931, 1755, 1780
TseI GCWGC 3 cut(s) 92, 452, 455
Tsp45I GTSAC 3 cut(s) 931, 1755, 1780
TspDTI ATGAA 9 cut(s) 506, 593, 992, 1336, 1386, 1971, 2573, 2592, 2702
TspGWI ACGGA 2 cut(s) 367, 879
TspRI CASTG 4 cut(s) 954, 1042, 1293, 1656
Tth111I GACNNNGTC 1 cut(s) 1017
Van91I CCANNNNNTGG 1 cut(s) 2926
VpaK11BI GGWCC 3 cut(s) 182, 887, 1070
XagI CCTNNNNNAGG 1 cut(s) 2114
XapI RAATTY 5 cut(s) 71, 292, 386, 2605, 2660
XbaI TCTAGA 1 cut(s) 226
XceI RCATGY 1 cut(s) 713
XhoI CTCGAG 1 cut(s) 1257
XmiI GTMKAC 2 cut(s) 2693, 2916
XmnI GAANNNNTTC 1 cut(s) 2955
ZrmI AGTACT 2 cut(s) 1227, 2538
Zsp2I ATGCAT 1 cut(s) 2900
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.