FvH4_4g06021

disease resistance

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Forward (+)
5447220 .. 5450354
3135 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g06021.t1

Sequence Viewer

Length: 2052 bp
ATGGCGTTTCTTATTGATATTGGTACCGGACTTGTTGGAAAACTTGTGGACTATACGGTTCTATCAGTTGGACGTCAAGTTGGTTATCTGATCTACTACAATCGGAACGTCAAAAGCCTAGAGGGTCAACTGAATGACTTGGTTGCTGTGAGTCAGAGTGTGGAACAAAGGGTTGGTGAAGAAAAGAGAAACATAAGAGAAGTGGAAGTCCTTGTCAACAAATGGCTGACAGATGTCAAAAGGATCACAGGAGAAGCAAATGAGATCTTGAATGAAGAGCACAAAGAAAAGATGAAGTGTCTTTGTGGATTATTTCCTAATTTAGTGGTTCGTCATCAACTAAATCGAAAATCAACAAAATTGGTATCTGATGTTGCTGAGCTCTATGGGAAGAAAGACTTTAGCACTTATGCCCATGCTATCATCCCACAAGATGTACCCTCCAAAGATTACGAGGCCTTCAGCTCAAGAACTGTAGTGGTGAACCAGATAATGGATGAATTGAGAAACAGTCCTAATGTCAACATGATTAGAGTATATGGGTTTGGTGGTGTGGGAAAGACCACACTTGTCAAAGAAGTTTCTCGTCAAGCTACAAGAGACAAGAAATTATTTGATGATGTGGCTATGATCCTGGACGTAAAACAAAATCCAAGCATCCAAAGGATTCAACAAGAAATTGCTGAGAAGTTAGGCCTTGACCTTCCTGAAAATCAGACTGTTGCTGGAAGAGCACGTCTTCTATCTAGCAGGATAAAAGACCAAAAGACTCTGGTAATTCTCGATGATGTGTGGGATGGAATTGATTTGGAGGCTGTGGGACTTTCTGGTGTGACGACTTGTAAAGTATTGTTGACATCAAGAACACGTGAAGTATTATCCGGTAAGATGCATACACAGAAAGAGTTTGCACTTGATCTTTTAGGGGAAGAAGAATCTTGGAGTCTGTTCAAGAAGAAGGCAGGTGATGTTGTTAAAGATCCTTCCATAAAAGCTGTAGCAACCAAAGTAGCCAAAAAATGTGGAGGTTTGCCGGTTTTAGTTGTCAGTGTTGCAAGTGCCTTGAAAAATAGAAGTACCTTACATGCATGGAAAGATGCGTTGACACGATTGAAAAGGTTGGACAAAGAAGAATTCACAGAAAAGACATACTTGGCTCTAGAGTGGAGTTATAGTCAATTAAATGATGAAGAGCTTAAGCAATTGTTCTTGCTCTGTGGCCTTTTGGCTAATTATATGAAAAATATTTATATCCTTGACCTGTTCAAATATGGCCTTGGTTTGGGTTTGTTTAAAAACCTCAACACACTGGGAGAAGCATGGGATGCAATAAATTCATTGCTTGAGAAACTTAAGGATTCTTGTCTACTGCTTGATGATGAAGACATTGGATGGCTCAAAATGCATGATCTTGTGCTTGATGTTGCTAAACGCATCTCATCGAGGGAACAACACGTGTTAATAGTAAGTGGTGGAGATGAGTTTAAAGAATGGCCAGATAATGAGGATTTCTATAAAAAGTGCAATATGATCTCCCTTGAAATACCCAGAGTTCCCAAGCTTCCAGAAGTTTTGCAATGCACGGAACTAAAGTTGTTTGCTCTTGGAGCAATTGTACATGTTGAGGGTAACTCCTTAGAAATGCCGTGCAACTTTTTTAAAGAAACGACAAAACTTGGAGTGTTGGATTTAAGTCGAGTGATTATCCCGACACTACCTCCATCTCTTCAGTTTCTAATAAATCTGAAGACATTGTGTTTTAATGACTGCAGCTTGGGTGACATTGCTCTAATTGGCCAACTACAAAACTTAGAAGTACTTAGCTTTGTAGATTTGAAGTTTAAAGAGTTGCCCAAAGAAGTAGGGCTTTTGACTCATCTACGATCATTGGATTTGACTGGTTGTACTCAGTTGGAAATAATTGCACCTGGTGTTATATCAAATTTGAAAAGACTAGAAGAACTATGTATGGGGAGTAGTTTTAACCGATGGGAGGCTGAAGGAGTCATCAGTACTGAAGCCTCTCAGAGCTTAAGCACTTGTCTAAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

684

Amino Acids

76.65

Weight (kDa)

5.92

Isoelectric Point (pI)

38.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 160 - 322 5.2e-31 NB-ARC domain
AAA_22 PF13401 176 - 264 2.3e-06 AAA domain
LRR_14 PF23598 579 - 659 5.2e-08 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 953
AatII GACGTC 1 cut(s) 76
Acc36I ACCTGC 1 cut(s) 953
Acc65I GGTACC 1 cut(s) 23
AccB1I GGYRCC 1 cut(s) 23
AccB7I CCANNNNNTGG 1 cut(s) 493
AccI GTMKAC 1 cut(s) 1366
AclWI GGATC 3 cut(s) 251, 625, 974
AcoI YGGCCR 2 cut(s) 1493, 1795
AcsI RAATTY 3 cut(s) 1133, 1333, 1942
AcuI CTGAAG 5 cut(s) 445, 1712, 1766, 2019, 2037
AcvI CACGTG 2 cut(s) 869, 1456
AcyI GRCGYC 1 cut(s) 73
AdeI CACNNNGTG 1 cut(s) 1931
AfaI GTAC 7 cut(s) 25, 438, 1078, 1617, 1818, 1906, 2014
AfiI CCNNNNNNNGG 3 cut(s) 493, 1282, 1993
AflII CTTAAG 3 cut(s) 1196, 1352, 2032
AflIII ACRYGT 4 cut(s) 866, 1453, 1455, 1618
AgsI TTSAA 9 cut(s) 271, 671, 952, 1066, 1114, 1267, 1541, 1837, 1948
AjiI CACGTC 1 cut(s) 737
AjnI CCWGG 2 cut(s) 633, 1927
AjuI GAANNNNNNNTTGG 2 cut(s) 156, 188
AluBI AGCT 9 cut(s) 382, 465, 593, 995, 1195, 1561, 1773, 1824, 2031
AluI AGCT 9 cut(s) 382, 465, 593, 995, 1195, 1561, 1773, 1824, 2031
Alw21I GWGCWC 3 cut(s) 282, 384, 736
Alw26I GTCTC 1 cut(s) 594
AlwI GGATC 3 cut(s) 251, 625, 974
AoxI GGCC 6 cut(s) 456, 694, 1219, 1273, 1493, 1795
ApeKI GCWGC 1 cut(s) 1770
ApoI RAATTY 3 cut(s) 1133, 1333, 1942
Asp718I GGTACC 1 cut(s) 23
AsuHPI GGTGA 4 cut(s) 188, 493, 977, 1790
BalI TGGCCA 2 cut(s) 1495, 1797
BanI GGYRCC 1 cut(s) 23
BanII GRGCYC 1 cut(s) 384
BbrPI CACGTG 2 cut(s) 869, 1456
BbsI GAAGAC 3 cut(s) 731, 1389, 1754
Bbv12I GWGCWC 3 cut(s) 282, 384, 736
BbvI GCAGC 1 cut(s) 1782
BccI CCATC 4 cut(s) 791, 1386, 1729, 1983
BceAI ACGGC 1 cut(s) 1630
BciT130I CCWGG 2 cut(s) 635, 1929
BcoDI GTCTC 1 cut(s) 594
BfaI CTAG 4 cut(s) 119, 747, 1160, 1955
BfmI CTRYAG 3 cut(s) 474, 996, 1768
BfrI CTTAAG 3 cut(s) 1196, 1352, 2032
BfuAI ACCTGC 1 cut(s) 953
BglII AGATCT 1 cut(s) 264
BisI GCNGC 1 cut(s) 1771
BlpI GCTNAGC 1 cut(s) 378
BlsI GCNGC 1 cut(s) 1772
BmcAI AGTACT 2 cut(s) 1818, 2014
Bme1390I CCNGG 2 cut(s) 635, 1929
BmgBI CACGTC 1 cut(s) 737
BmiI GGNNCC 1 cut(s) 25
BmrFI CCNGG 2 cut(s) 635, 1929
BmrI ACTGGG 1 cut(s) 1319
BmsI GCATC 5 cut(s) 666, 879, 1087, 1315, 1443
BmuI ACTGGG 1 cut(s) 1319
BoxI GACNNNNGTC 1 cut(s) 233
BpiI GAAGAC 3 cut(s) 731, 1389, 1754
BplI GAGNNNNNCTC 2 cut(s) 1616, 1648
Bpu1102I GCTNAGC 1 cut(s) 378
BpuEI CTTGAG 2 cut(s) 451, 1364
BsaAI YACGTR 2 cut(s) 869, 1456
BsaHI GRCGYC 1 cut(s) 73
BsaJI CCNNGG 1 cut(s) 1276
BsaWI WCCGGW 2 cut(s) 26, 881
BsaXI ACNNNNNCTCC 6 cut(s) 1159, 1189, 1599, 1629, 1702, 1732
Bsc4I CCNNNNNNNGG 3 cut(s) 493, 1282, 1993
Bse118I RCCGGY 1 cut(s) 1033
Bse1I ACTGG 2 cut(s) 1314, 1903
Bse3DI GCAATG 3 cut(s) 1337, 1583, 1782
BseBI CCWGG 2 cut(s) 635, 1929
BseDI CCNNGG 1 cut(s) 1276
BseGI GGATG 6 cut(s) 423, 502, 657, 802, 1330, 1397
BseLI CCNNNNNNNGG 3 cut(s) 493, 1282, 1993
BseMI GCAATG 3 cut(s) 1337, 1583, 1782
BseMII CTCAG 4 cut(s) 369, 675, 1922, 2039
BseNI ACTGG 2 cut(s) 1314, 1903
BseXI GCAGC 1 cut(s) 1782
BshFI GGCC 6 cut(s) 458, 696, 1221, 1275, 1495, 1797
BshNI GGYRCC 1 cut(s) 23
BsiHKAI GWGCWC 3 cut(s) 282, 384, 736
BsiSI CCGG 3 cut(s) 27, 882, 1034
BslFI GGGAC 1 cut(s) 834
BslI CCNNNNNNNGG 3 cut(s) 493, 1282, 1993
BsmAI GTCTC 1 cut(s) 594
BsmFI GGGAC 1 cut(s) 834
BsnI GGCC 6 cut(s) 458, 696, 1221, 1275, 1495, 1797
Bsp1286I GDGCHC 3 cut(s) 282, 384, 736
Bsp1407I TGTACA 1 cut(s) 1615
Bsp143I GATC 9 cut(s) 90, 243, 264, 630, 916, 979, 1408, 1530, 1883
Bsp1720I GCTNAGC 1 cut(s) 378
BspANI GGCC 6 cut(s) 458, 696, 1221, 1275, 1495, 1797
BspCNI CTCAG 4 cut(s) 370, 676, 1921, 2038
BspLI GGNNCC 1 cut(s) 25
BspMAI CTGCAG 1 cut(s) 1772
BspMI ACCTGC 1 cut(s) 953
BspPI GGATC 3 cut(s) 251, 625, 974
BspQI GCTCTTC 3 cut(s) 270, 724, 1185
BspT107I GGYRCC 1 cut(s) 23
BspTI CTTAAG 3 cut(s) 1196, 1352, 2032
BsrDI GCAATG 3 cut(s) 1337, 1583, 1782
BsrFI RCCGGY 1 cut(s) 1033
BsrGI TGTACA 1 cut(s) 1615
BsrI ACTGG 2 cut(s) 1314, 1903
BssAI RCCGGY 1 cut(s) 1033
BssECI CCNNGG 1 cut(s) 1276
BssMI GATC 9 cut(s) 90, 243, 264, 630, 916, 979, 1408, 1530, 1883
BssNI GRCGYC 1 cut(s) 73
BssT1I CCWWGG 1 cut(s) 1276
Bst2UI CCWGG 2 cut(s) 635, 1929
Bst4CI ACNGT 4 cut(s) 58, 475, 512, 721
Bst6I CTCTTC 4 cut(s) 270, 724, 1185, 1731
BstACI GRCGYC 1 cut(s) 73
BstAFI CTTAAG 3 cut(s) 1196, 1352, 2032
BstAPI GCANNNNNTGC 1 cut(s) 1325
BstAUI TGTACA 1 cut(s) 1615
BstBAI YACGTR 2 cut(s) 869, 1456
BstDEI CTNAG 7 cut(s) 378, 684, 1636, 1810, 1820, 1908, 2025
BstF5I GGATG 6 cut(s) 423, 502, 657, 802, 1330, 1397
BstKTI GATC 9 cut(s) 93, 246, 267, 633, 919, 982, 1411, 1533, 1886
BstMAI GTCTC 1 cut(s) 594
BstMBI GATC 9 cut(s) 90, 243, 264, 630, 916, 979, 1408, 1530, 1883
BstMWI GCNNNNNNNGC 4 cut(s) 731, 1325, 1402, 1607
BstNI CCWGG 2 cut(s) 635, 1929
BstNSI RCATGY 2 cut(s) 1088, 1622
BstPAI GACNNNNGTC 1 cut(s) 233
BstSCI CCNGG 2 cut(s) 633, 1927
BstSFI CTRYAG 3 cut(s) 474, 996, 1768
BstV1I GCAGC 1 cut(s) 1782
BstV2I GAAGAC 3 cut(s) 731, 1389, 1754
BstX2I RGATCY 2 cut(s) 264, 979
BstYI RGATCY 2 cut(s) 264, 979
BsuRI GGCC 6 cut(s) 458, 696, 1221, 1275, 1495, 1797
BtrI CACGTC 1 cut(s) 737
BtsCI GGATG 6 cut(s) 423, 502, 657, 802, 1330, 1397
BtsIMutI CAGTG 2 cut(s) 1054, 1307
BveI ACCTGC 1 cut(s) 953
Cfr10I RCCGGY 1 cut(s) 1033
CsiI ACCWGGT 1 cut(s) 1927
Csp6I GTAC 7 cut(s) 24, 437, 1077, 1616, 1817, 1905, 2013
CspCI CAANNNNNGTGG 2 cut(s) 1003, 1038
CviAII CATG 7 cut(s) 416, 526, 1085, 1089, 1320, 1406, 1619
CviQI GTAC 7 cut(s) 24, 437, 1077, 1616, 1817, 1905, 2013
DdeI CTNAG 7 cut(s) 378, 684, 1636, 1810, 1820, 1908, 2025
DpnI GATC 9 cut(s) 92, 245, 266, 632, 918, 981, 1410, 1532, 1885
DpnII GATC 9 cut(s) 90, 243, 264, 630, 916, 979, 1408, 1530, 1883
DraI TTTAAA 4 cut(s) 1294, 1486, 1660, 1843
DraIII CACNNNGTG 1 cut(s) 1931
EaeI YGGCCR 2 cut(s) 1493, 1795
Eam1104I CTCTTC 4 cut(s) 270, 724, 1185, 1731
EarI CTCTTC 4 cut(s) 270, 724, 1185, 1731
Ecl136II GAGCTC 1 cut(s) 382
Eco130I CCWWGG 1 cut(s) 1276
Eco147I AGGCCT 2 cut(s) 458, 696
Eco24I GRGCYC 1 cut(s) 384
Eco53kI GAGCTC 1 cut(s) 382
Eco57I CTGAAG 5 cut(s) 445, 1712, 1766, 2019, 2037
Eco72I CACGTG 2 cut(s) 869, 1456
EcoICRI GAGCTC 1 cut(s) 382
EcoRI GAATTC 1 cut(s) 1133
EcoRII CCWGG 2 cut(s) 633, 1927
EcoT14I CCWWGG 1 cut(s) 1276
EcoT22I ATGCAT 3 cut(s) 894, 1090, 1407
EcoT38I GRGCYC 1 cut(s) 384
ErhI CCWWGG 1 cut(s) 1276
FaeI CATG 7 cut(s) 419, 529, 1088, 1092, 1323, 1409, 1622
FalI AAGNNNNNCTT 6 cut(s) 383, 415, 1136, 1168, 1851, 1883
FaqI GGGAC 1 cut(s) 834
FatI CATG 7 cut(s) 415, 525, 1084, 1088, 1319, 1405, 1618
FblI GTMKAC 1 cut(s) 1366
Fnu4HI GCNGC 1 cut(s) 1771
FokI GGATG 6 cut(s) 410, 509, 644, 809, 1337, 1404
FriOI GRGCYC 1 cut(s) 384
Fsp4HI GCNGC 1 cut(s) 1771
FspBI CTAG 4 cut(s) 119, 747, 1160, 1955
GluI GCNGC 1 cut(s) 1771
HaeIII GGCC 6 cut(s) 458, 696, 1221, 1275, 1495, 1797
HapII CCGG 3 cut(s) 27, 882, 1034
Hin1I GRCGYC 1 cut(s) 73
Hin1II CATG 7 cut(s) 419, 529, 1088, 1092, 1323, 1409, 1622
HincII GTYRAC 5 cut(s) 128, 217, 523, 855, 1104
HindII GTYRAC 5 cut(s) 128, 217, 523, 855, 1104
HindIII AAGCTT 1 cut(s) 1559
HinfI GANTC 8 cut(s) 151, 667, 769, 935, 943, 1358, 1873, 2004
HpaII CCGG 3 cut(s) 27, 882, 1034
HphI GGTGA 4 cut(s) 188, 493, 977, 1790
Hpy166II GTNNAC 8 cut(s) 49, 128, 217, 484, 523, 855, 1104, 1367
Hpy188I TCNGA 7 cut(s) 90, 105, 156, 370, 717, 1746, 2028
Hpy188III TCNNGA 9 cut(s) 268, 468, 707, 782, 861, 952, 1160, 1565, 1708
Hpy8I GTNNAC 8 cut(s) 49, 128, 217, 484, 523, 855, 1104, 1367
HpyAV CCTTC 5 cut(s) 469, 713, 952, 993, 1994
HpyCH4III ACNGT 4 cut(s) 58, 475, 512, 721
HpyCH4IV ACGT 6 cut(s) 73, 108, 639, 736, 868, 1455
HpyF10VI GCNNNNNNNGC 4 cut(s) 731, 1325, 1402, 1607
HpyF3I CTNAG 7 cut(s) 378, 684, 1636, 1810, 1820, 1908, 2025
HpySE526I ACGT 6 cut(s) 73, 108, 639, 736, 868, 1455
Hsp92I GRCGYC 1 cut(s) 73
Hsp92II CATG 7 cut(s) 419, 529, 1088, 1092, 1323, 1409, 1622
KpnI GGTACC 1 cut(s) 27
Kzo9I GATC 9 cut(s) 90, 243, 264, 630, 916, 979, 1408, 1530, 1883
LguI GCTCTTC 3 cut(s) 270, 724, 1185
LmnI GCTCC 1 cut(s) 1607
Lsp1109I GCAGC 1 cut(s) 1782
LweI GCATC 5 cut(s) 666, 879, 1087, 1315, 1443
MabI ACCWGGT 1 cut(s) 1927
MaeI CTAG 4 cut(s) 119, 747, 1160, 1955
MaeII ACGT 6 cut(s) 73, 108, 639, 736, 868, 1455
MaeIII GTNAC 3 cut(s) 832, 1628, 1778
MalI GATC 9 cut(s) 92, 245, 266, 632, 918, 981, 1410, 1532, 1885
MboI GATC 9 cut(s) 90, 243, 264, 630, 916, 979, 1408, 1530, 1883
MfeI CAATTG 2 cut(s) 1202, 1611
MflI RGATCY 2 cut(s) 264, 979
MhlI GDGCHC 3 cut(s) 282, 384, 736
MlsI TGGCCA 2 cut(s) 1495, 1797
MluNI TGGCCA 2 cut(s) 1495, 1797
MlyI GAGTC 5 cut(s) 160, 763, 952, 1867, 2013
MmeI TCCRAC 5 cut(s) 16, 49, 1101, 1665, 1893
Mox20I TGGCCA 2 cut(s) 1495, 1797
Mph1103I ATGCAT 3 cut(s) 894, 1090, 1407
MscI TGGCCA 2 cut(s) 1495, 1797
Msp20I TGGCCA 2 cut(s) 1495, 1797
MspCI CTTAAG 3 cut(s) 1196, 1352, 2032
MspI CCGG 3 cut(s) 27, 882, 1034
MspR9I CCNGG 2 cut(s) 635, 1929
MunI CAATTG 2 cut(s) 1202, 1611
MvaI CCWGG 2 cut(s) 635, 1929
MwoI GCNNNNNNNGC 4 cut(s) 731, 1325, 1402, 1607
NdeII GATC 9 cut(s) 90, 243, 264, 630, 916, 979, 1408, 1530, 1883
NlaIII CATG 7 cut(s) 419, 529, 1088, 1092, 1323, 1409, 1622
NlaIV GGNNCC 1 cut(s) 25
NmuCI GTSAC 2 cut(s) 832, 1778
NsiI ATGCAT 3 cut(s) 894, 1090, 1407
NspI RCATGY 2 cut(s) 1088, 1622
PaqCI CACCTGC 1 cut(s) 953
PceI AGGCCT 2 cut(s) 458, 696
PciI ACATGT 1 cut(s) 1618
PciSI GCTCTTC 3 cut(s) 270, 724, 1185
PfeI GAWTC 3 cut(s) 667, 935, 1358
PflMI CCANNNNNTGG 1 cut(s) 493
PfoI TCCNGGA 1 cut(s) 633
PkrI GCNGC 1 cut(s) 1772
PleI GAGTC 5 cut(s) 159, 763, 951, 1867, 2012
PmaCI CACGTG 2 cut(s) 869, 1456
PmlI CACGTG 2 cut(s) 869, 1456
PpsI GAGTC 5 cut(s) 159, 763, 951, 1867, 2012
Ppu21I YACGTR 2 cut(s) 869, 1456
PscI ACATGT 1 cut(s) 1618
PshAI GACNNNNGTC 1 cut(s) 233
Psp124BI GAGCTC 1 cut(s) 384
Psp6I CCWGG 2 cut(s) 633, 1927
PspCI CACGTG 2 cut(s) 869, 1456
PspGI CCWGG 2 cut(s) 633, 1927
PspN4I GGNNCC 1 cut(s) 25
PstI CTGCAG 1 cut(s) 1772
PsuI RGATCY 2 cut(s) 264, 979
RsaI GTAC 7 cut(s) 25, 438, 1078, 1617, 1818, 1906, 2014
RsaNI GTAC 7 cut(s) 24, 437, 1077, 1616, 1817, 1905, 2013
SacI GAGCTC 1 cut(s) 384
SapI GCTCTTC 3 cut(s) 270, 724, 1185
SatI GCNGC 1 cut(s) 1771
Sau3AI GATC 9 cut(s) 90, 243, 264, 630, 916, 979, 1408, 1530, 1883
ScaI AGTACT 2 cut(s) 1818, 2014
SchI GAGTC 5 cut(s) 160, 763, 952, 1867, 2013
ScrFI CCNGG 2 cut(s) 635, 1929
SduI GDGCHC 3 cut(s) 282, 384, 736
SexAI ACCWGGT 1 cut(s) 1927
SfaNI GCATC 5 cut(s) 666, 879, 1087, 1315, 1443
SfcI CTRYAG 3 cut(s) 474, 996, 1768
SmlI CTYRAG 5 cut(s) 466, 1196, 1343, 1352, 2032
SmoI CTYRAG 5 cut(s) 466, 1196, 1343, 1352, 2032
SseBI AGGCCT 2 cut(s) 458, 696
SspI AATATT 1 cut(s) 1246
SspMI CTAG 4 cut(s) 119, 747, 1160, 1955
SstI GAGCTC 1 cut(s) 384
StuI AGGCCT 2 cut(s) 458, 696
StyD4I CCNGG 2 cut(s) 633, 1927
StyI CCWWGG 1 cut(s) 1276
TaaI ACNGT 4 cut(s) 58, 475, 512, 721
TaiI ACGT 6 cut(s) 76, 111, 642, 739, 871, 1458
TaqI TCGA 4 cut(s) 346, 783, 1442, 1696
TatI WGTACW 4 cut(s) 1615, 1816, 1904, 2012
TfiI GAWTC 3 cut(s) 667, 935, 1358
TscAI CASTG 2 cut(s) 1054, 1314
TseFI GTSAC 2 cut(s) 832, 1778
TseI GCWGC 1 cut(s) 1770
Tsp45I GTSAC 2 cut(s) 832, 1778
TspDTI ATGAA 7 cut(s) 288, 308, 513, 1203, 1253, 1326, 1395
TspGWI ACGGA 1 cut(s) 1598
TspRI CASTG 2 cut(s) 1054, 1314
Van91I CCANNNNNTGG 1 cut(s) 493
Vha464I CTTAAG 3 cut(s) 1196, 1352, 2032
XapI RAATTY 3 cut(s) 1133, 1333, 1942
XbaI TCTAGA 1 cut(s) 1159
XceI RCATGY 2 cut(s) 1088, 1622
XmiI GTMKAC 1 cut(s) 1366
XspI CTAG 4 cut(s) 119, 747, 1160, 1955
ZraI GACGTC 1 cut(s) 74
ZrmI AGTACT 2 cut(s) 1818, 2014
Zsp2I ATGCAT 3 cut(s) 894, 1090, 1407
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.