pycom08g06850

disease resistance

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
Physical Location & Seq
Forward (+)
5420391 .. 5422883
2493 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g06850.1

Sequence Viewer

Length: 2424 bp
ATGGACATTGTCATTCATATTGTCGGAAAAGTTGCCGAGTATGCAGTTCAACCAGCTATGCGCCAAGTGGGTTATCTAGCTCACTGCAAAAGGAACCTTGAGAATCTAAAGACTCAAGTGAACGAATTAAGTGCTGCTAGAGAGCGGCTAGAACTCGAGGTTGTTCGAGCTGAAGAAAAAGGTGAAGAAATCCAAACTGACATCCAGAACTGGCTAAAAGACGTGGTTGAGATCACTGAGAAGGCGAACGAATTATGGAAGCGTGATACGCAAACAAAGATGAGCTGTCTCCGTGGGGATTGTCCAAACCCGGTGCTCCGTTACAAGCTAGGCAGGAGATCAACAAAGTTGCAGCAGGCGGTTGTTAACCTTTACGCGAAAAGAGATTTCGCTAGCATTTCGTACAATGTCCGCCCACAAGAGGTATCCATGGTATCTGACAAACATTATGAGGCATTTGATTCGAGGAATTTAACTGTCAAGAAGATCATGGATGAACTGAGAATTCCTAATACCGACCTGATTTTGGTGTATGGTATTGGAGGCGTGGGGAAGACCACACTTGTTGAAGAAGTCCTTAGGCAAGCTGTAAAAGAAAAGTTATTTGCTGATGCGGTTATGGTAAGAAGTGTGCAAAATCCGGACCTTGAAGGAATTCAAAAAGAAATTGCCAGGATGTTAGGTATGGAAGTTTATGAAAGCGAAACTATGTCAAACAGAGCACTTCGTCTGTGTAACAGGATAAAAGCCAAGAAAGTTCTTGTAATTTTAGACAACATTTGGGAAAGCATTGACTTGCAGAGTGTAGGACTTCCTTGTCTGCCGACTTGTAGAATACTGTTGACATCCAGAACTCGAAAATTGCTATCCTCAGAGAAGCGGTTGCAAAAAGACTTTGTGCTTCAAGTTTTAAACAAGGAAGAAGCTTGGCGTTTATTTGAGATGAAGGCAGGTGGTGTTGTTAAAAATCCCAACATACAAACTGTGGCAACTGAAGTAGCCAAAAAATGTGGAGGTTTGCCAGTTTTGGTTGTCACAGTCGCAAGCTCTTTACGAAATAGAAGTACTTTACCAGTATGGAGGGATGCCTTGAGATGCCTAAAAGTGTTTGACAACGAACACTCAGCCGAACAAGAAGCATACTCGGCTTTAGAGTGGAGTTACAATCAATTGGATGATCAAAAACTGAAGCCCCTATTCTTGATATGTGGAATTTTGGTACGTCTTGGGGGAGCCTACGCTTCTCTGACAAACTTGTTGAAATATACAATTGGTTTGGGTTTGTTTAATAACATTGACTCAGTGGAGCACGCACAATATGCATTGCACTCGCGGATTGAAGAGCTTAAAGATTCTTGTCTGTTACTCGAATTCGAGGATAATACATCATTCACAATGCATGATATGGTACGTGATGTTGCCATCTCGATTGCATCTAAAGGCCAACGTGCCTTATTAAGAACATATGGAGATGAGTTGAAGGAATGGCCAAACAATAAGGATTTTTTGGAAAATTGCACAATGATCTCTTTGCGTTGCAAAAACATCCCTAGGCTTCCTGAAGTTTTGAAATGCCAACAACTGGAGTTTTTTCATTTGCAATATGATGGTGACTTGCTTGAAATCCCAGGTAAATTTTTCGAGGAGATGGGAAAGCTTAAAGTTATGGATTTTACCAATGTGCATATTTGGTCAATACCTCCATCTCTTCTGCTCCTAGAAAATCTTCGTACATTGTGTTTGGATCAATGCGTGTTGGGAGACATAACTCTAGTCGGACAGCTATTGCAACTAGAAATTCTCAGCTTTATATATTCCAATCTTAAAGAGTTGCCGAAAGAAATAGGGAAATTGACTCGTCTTCGACTGCTGGATTTAAGCTGGTGCTCTGAACTCAAAGTGATTTCACCTAATGTTATATCAAGTTTGAAAAGTCTAGAAGACTTGAGAATGAAAAACAGCTTCAACGGATGGGTGCCAGAAGGAGTCATCGGAGAAAGAAGTAATGCTAGTCTTTTGGAACTGAAGGACTTGCCTCGTTTAGCTGCATTAAGCATACATGTTCCAGATGCTAGCAGTATTCCGACAAACTTGTTCACAGACAAGTTAAAAAGATACGAAATATTAATCGGCACTGCGCCAAAATGGGACGATGTGGATGAAACCCTCAATACATTGAAGCTCCACCTCCCAACTGGCTGTGAATTGGACCATGGTCTAGAAATGTTGTTGAAGAGGTCATGTGAAGATTTGTACTTGGATGGGTCGGAGGGAGCTGATAATGTTGTGTACCACTCAGGTAGTGAAGATTTTCAACAACTCAAGCATCTCCATGTGAAAAACAATGCCCAATTTACACATATCATTACTGAGGAGGTATGCCTTTGGTGTCATTCTTTCCCATTTATGCCATTAAACTTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

808

Amino Acids

91.94

Weight (kDa)

6.1

Isoelectric Point (pI)

44.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 159 - 317 3.5e-26 NB-ARC domain
AAA_22 PF13401 174 - 260 3.4e-06 AAA domain
LRR_14 PF23598 516 - 652 8.3e-09 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 941
AasI GACNNNNNNGTC 1 cut(s) 816
Acc36I ACCTGC 1 cut(s) 941
AccB1I GGYRCC 1 cut(s) 1975
AccB7I CCANNNNNTGG 1 cut(s) 1582
AccBSI CCGCTC 1 cut(s) 145
AccII CGCG 2 cut(s) 377, 1333
AccIII TCCGGA 1 cut(s) 640
AciI CCGC 6 cut(s) 145, 359, 412, 614, 880, 1333
AclWI GGATC 1 cut(s) 1752
AcoI YGGCCR 1 cut(s) 1487
AcsI RAATTY 7 cut(s) 469, 504, 654, 1212, 1370, 1634, 1797
AcuI CTGAAG 5 cut(s) 192, 1014, 1208, 1581, 2045
AfaI GTAC 7 cut(s) 404, 1066, 1221, 1410, 1732, 2255, 2291
AfiI CCNNNNNNNGG 3 cut(s) 421, 526, 1582
AflIII ACRYGT 1 cut(s) 2059
AjiI CACGTC 1 cut(s) 223
AjnI CCWGG 2 cut(s) 671, 1627
Alw21I GWGCWC 4 cut(s) 318, 724, 1311, 1889
Alw26I GTCTC 2 cut(s) 293, 1755
AlwI GGATC 1 cut(s) 1752
Ama87I CYCGRG 1 cut(s) 155
Aor13HI TCCGGA 1 cut(s) 640
AoxI GGCC 2 cut(s) 1441, 1487
ApeKI GCWGC 3 cut(s) 134, 352, 2045
ApoI RAATTY 7 cut(s) 469, 504, 654, 1212, 1370, 1634, 1797
AseI ATTAAT 1 cut(s) 2126
Asp700I GAANNNNTTC 3 cut(s) 654, 1725, 2310
AspA2I CCTAGG 1 cut(s) 1550
AspLEI GCGC 2 cut(s) 63, 2140
AspS9I GGNCC 2 cut(s) 643, 2209
AsuC2I CCSGG 1 cut(s) 311
AsuHPI GGTGA 3 cut(s) 194, 1622, 1899
AsuNHI GCTAGC 2 cut(s) 392, 2072
AvaI CYCGRG 1 cut(s) 155
AvaII GGWCC 2 cut(s) 643, 2209
AvrII CCTAGG 1 cut(s) 1550
AxyI CCTNAGG 1 cut(s) 578
BalI TGGCCA 1 cut(s) 1489
BanI GGYRCC 1 cut(s) 1975
BbsI GAAGAC 3 cut(s) 560, 1853, 1947
Bbv12I GWGCWC 4 cut(s) 318, 724, 1311, 1889
BbvI GCAGC 3 cut(s) 121, 364, 2032
BccI CCATC 6 cut(s) 1430, 1601, 1642, 1711, 1965, 2255
BcgI CGANNNNNNTGC 6 cut(s) 113, 147, 444, 478, 1311, 1345
BciT130I CCWGG 2 cut(s) 673, 1629
BciVI GTATCC 1 cut(s) 436
BclI TGATCA 1 cut(s) 1177
BcnI CCSGG 1 cut(s) 311
BcoDI GTCTC 2 cut(s) 293, 1755
BfuAI ACCTGC 1 cut(s) 941
BfuI GTATCC 1 cut(s) 436
BisI GCNGC 4 cut(s) 135, 146, 353, 2046
BlnI CCTAGG 1 cut(s) 1550
BlsI GCNGC 4 cut(s) 136, 147, 354, 2047
BmcAI AGTACT 1 cut(s) 1066
Bme1390I CCNGG 3 cut(s) 311, 673, 1629
Bme18I GGWCC 2 cut(s) 643, 2209
BmeT110I CYCGRG 1 cut(s) 155
BmgBI CACGTC 1 cut(s) 223
BmgT120I GGNCC 2 cut(s) 643, 2209
BmiI GGNNCC 3 cut(s) 95, 1234, 1977
BmrFI CCNGG 3 cut(s) 311, 673, 1629
BmsI GCATC 6 cut(s) 601, 1075, 1085, 1442, 2059, 2335
BmtI GCTAGC 2 cut(s) 396, 2076
BoxI GACNNNNGTC 1 cut(s) 2214
BpiI GAAGAC 3 cut(s) 560, 1853, 1947
BpmI CTGGAG 1 cut(s) 1604
BpuEI CTTGAG 5 cut(s) 99, 119, 1111, 1966, 2306
BpuMI CCSGG 1 cut(s) 311
BsaAI YACGTR 1 cut(s) 1412
BsaJI CCNNGG 5 cut(s) 292, 429, 1550, 1627, 2212
BsaWI WCCGGW 1 cut(s) 640
Bsc4I CCNNNNNNNGG 3 cut(s) 421, 526, 1582
Bse1I ACTGG 5 cut(s) 215, 1022, 1073, 1587, 2200
Bse21I CCTNAGG 1 cut(s) 578
Bse3DI GCAATG 1 cut(s) 1322
BseAI TCCGGA 1 cut(s) 640
BseBI CCWGG 2 cut(s) 673, 1629
BseDI CCNNGG 5 cut(s) 292, 429, 1550, 1627, 2212
BseLI CCNNNNNNNGG 3 cut(s) 421, 526, 1582
BseMI GCAATG 1 cut(s) 1322
BseMII CTCAG 8 cut(s) 228, 491, 885, 1137, 1314, 1816, 2310, 2361
BseNI ACTGG 5 cut(s) 215, 1022, 1073, 1587, 2200
BseRI GAGGAG 2 cut(s) 1658, 2387
BseXI GCAGC 3 cut(s) 121, 364, 2032
Bsh1236I CGCG 2 cut(s) 377, 1333
BshFI GGCC 2 cut(s) 1443, 1489
BshNI GGYRCC 1 cut(s) 1975
BsiHKAI GWGCWC 4 cut(s) 318, 724, 1311, 1889
BsiHKCI CYCGRG 1 cut(s) 155
BsiSI CCGG 2 cut(s) 311, 641
BslFI GGGAC 1 cut(s) 2162
BslI CCNNNNNNNGG 3 cut(s) 421, 526, 1582
BsmAI GTCTC 2 cut(s) 293, 1755
BsmFI GGGAC 1 cut(s) 2162
BsnI GGCC 2 cut(s) 1443, 1489
BsoBI CYCGRG 1 cut(s) 155
Bsp1286I GDGCHC 4 cut(s) 318, 724, 1311, 1889
Bsp13I TCCGGA 1 cut(s) 640
Bsp143I GATC 6 cut(s) 231, 338, 486, 1177, 1524, 1744
Bsp19I CCATGG 2 cut(s) 429, 2212
BspACI CCGC 6 cut(s) 145, 359, 412, 614, 880, 1333
BspANI GGCC 2 cut(s) 1443, 1489
BspCNI CTCAG 8 cut(s) 229, 492, 884, 1136, 1313, 1815, 2309, 2362
BspEI TCCGGA 1 cut(s) 640
BspFNI CGCG 2 cut(s) 377, 1333
BspLI GGNNCC 3 cut(s) 95, 1234, 1977
BspMI ACCTGC 1 cut(s) 941
BspOI GCTAGC 2 cut(s) 396, 2076
BspPI GGATC 1 cut(s) 1752
BspQI GCTCTTC 1 cut(s) 1335
BspT107I GGYRCC 1 cut(s) 1975
BsrBI CCGCTC 1 cut(s) 145
BsrDI GCAATG 1 cut(s) 1322
BsrI ACTGG 5 cut(s) 215, 1022, 1073, 1587, 2200
BssECI CCNNGG 5 cut(s) 292, 429, 1550, 1627, 2212
BssMI GATC 6 cut(s) 231, 338, 486, 1177, 1524, 1744
BssT1I CCWWGG 3 cut(s) 429, 1550, 2212
Bst2UI CCWGG 2 cut(s) 673, 1629
Bst4CI ACNGT 4 cut(s) 478, 840, 985, 1039
Bst6I CTCTTC 3 cut(s) 1335, 1713, 2228
BstAPI GCANNNNNTGC 1 cut(s) 1319
BstBAI YACGTR 1 cut(s) 1412
BstC8I GCNNGC 6 cut(s) 357, 394, 585, 1045, 1311, 2074
BstDEI CTNAG 9 cut(s) 237, 500, 578, 871, 1123, 1300, 1802, 2296, 2370
BstDSI CCRYGG 3 cut(s) 292, 429, 2212
BstFNI CGCG 2 cut(s) 377, 1333
BstHHI GCGC 2 cut(s) 63, 2140
BstKTI GATC 6 cut(s) 234, 341, 489, 1180, 1527, 1747
BstMAI GTCTC 2 cut(s) 293, 1755
BstMBI GATC 6 cut(s) 231, 338, 486, 1177, 1524, 1744
BstMWI GCNNNNNNNGC 4 cut(s) 41, 268, 1145, 1319
BstNI CCWGG 2 cut(s) 673, 1629
BstNSI RCATGY 1 cut(s) 2063
BstPAI GACNNNNGTC 1 cut(s) 2214
BstSCI CCNGG 3 cut(s) 309, 671, 1627
BstUI CGCG 2 cut(s) 377, 1333
BstV1I GCAGC 3 cut(s) 121, 364, 2032
BstV2I GAAGAC 3 cut(s) 560, 1853, 1947
Bsu36I CCTNAGG 1 cut(s) 578
BsuI GTATCC 1 cut(s) 436
BsuRI GGCC 2 cut(s) 1443, 1489
BtgI CCRYGG 3 cut(s) 292, 429, 2212
BtrI CACGTC 1 cut(s) 223
BtsI GCAGTG 2 cut(s) 82, 2133
BtsIMutI CAGTG 4 cut(s) 82, 234, 1308, 2133
BveI ACCTGC 1 cut(s) 941
Cac8I GCNNGC 6 cut(s) 357, 394, 585, 1045, 1311, 2074
CfoI GCGC 2 cut(s) 63, 2140
Cfr13I GGNCC 2 cut(s) 643, 2209
Csp6I GTAC 7 cut(s) 403, 1065, 1220, 1409, 1731, 2254, 2290
CspCI CAANNNNNGTGG 4 cut(s) 547, 582, 991, 1026
CviAII CATG 7 cut(s) 430, 490, 1400, 2060, 2213, 2241, 2333
CviQI GTAC 7 cut(s) 403, 1065, 1220, 1409, 1731, 2254, 2290
DdeI CTNAG 9 cut(s) 237, 500, 578, 871, 1123, 1300, 1802, 2296, 2370
DpnI GATC 6 cut(s) 233, 340, 488, 1179, 1526, 1746
DpnII GATC 6 cut(s) 231, 338, 486, 1177, 1524, 1744
DraI TTTAAA 1 cut(s) 912
DrdI GACNNNNNNGTC 1 cut(s) 816
DseDI GACNNNNNNGTC 1 cut(s) 816
EaeI YGGCCR 1 cut(s) 1487
Eam1104I CTCTTC 3 cut(s) 1335, 1713, 2228
EarI CTCTTC 3 cut(s) 1335, 1713, 2228
EciI GGCGGA 1 cut(s) 401
Eco130I CCWWGG 3 cut(s) 429, 1550, 2212
Eco47I GGWCC 2 cut(s) 643, 2209
Eco57I CTGAAG 5 cut(s) 192, 1014, 1208, 1581, 2045
Eco81I CCTNAGG 1 cut(s) 578
Eco88I CYCGRG 1 cut(s) 155
EcoRI GAATTC 3 cut(s) 504, 654, 1370
EcoRII CCWGG 2 cut(s) 671, 1627
EcoT14I CCWWGG 3 cut(s) 429, 1550, 2212
EcoT22I ATGCAT 2 cut(s) 1324, 1401
ErhI CCWWGG 3 cut(s) 429, 1550, 2212
FaeI CATG 7 cut(s) 433, 493, 1403, 2063, 2216, 2244, 2336
FalI AAGNNNNNCTT 2 cut(s) 561, 593
FaqI GGGAC 1 cut(s) 2162
FatI CATG 7 cut(s) 429, 489, 1399, 2059, 2212, 2240, 2332
FauNDI CATATG 1 cut(s) 1465
FbaI TGATCA 1 cut(s) 1177
Fnu4HI GCNGC 4 cut(s) 135, 146, 353, 2046
Fsp4HI GCNGC 4 cut(s) 135, 146, 353, 2046
GlaI GCGC 2 cut(s) 62, 2139
GluI GCNGC 4 cut(s) 135, 146, 353, 2046
GsuI CTGGAG 1 cut(s) 1604
HaeIII GGCC 2 cut(s) 1443, 1489
HapII CCGG 2 cut(s) 311, 641
HhaI GCGC 2 cut(s) 63, 2140
Hin1II CATG 7 cut(s) 433, 493, 1403, 2063, 2216, 2244, 2336
Hin6I GCGC 2 cut(s) 61, 2138
HinP1I GCGC 2 cut(s) 61, 2138
HincII GTYRAC 2 cut(s) 367, 843
HindII GTYRAC 2 cut(s) 367, 843
HindIII AAGCTT 2 cut(s) 924, 1655
HinfI GANTC 7 cut(s) 103, 112, 461, 1298, 1352, 1855, 1986
HpaI GTTAAC 1 cut(s) 367
HpaII CCGG 2 cut(s) 311, 641
HphI GGTGA 3 cut(s) 194, 1622, 1899
Hpy166II GTNNAC 5 cut(s) 121, 367, 843, 2097, 2290
Hpy188I TCNGA 9 cut(s) 26, 439, 874, 1248, 1778, 1891, 1994, 2085, 2269
Hpy8I GTNNAC 5 cut(s) 121, 367, 843, 2097, 2290
HpyAV CCTTC 6 cut(s) 235, 644, 940, 1474, 1976, 2020
HpyCH4III ACNGT 4 cut(s) 478, 840, 985, 1039
HpyCH4IV ACGT 4 cut(s) 222, 1222, 1411, 1447
HpyF10VI GCNNNNNNNGC 4 cut(s) 41, 268, 1145, 1319
HpyF3I CTNAG 9 cut(s) 237, 500, 578, 871, 1123, 1300, 1802, 2296, 2370
HpySE526I ACGT 4 cut(s) 222, 1222, 1411, 1447
Hsp92II CATG 7 cut(s) 433, 493, 1403, 2063, 2216, 2244, 2336
HspAI GCGC 2 cut(s) 61, 2138
Kpn2I TCCGGA 1 cut(s) 640
Ksp22I TGATCA 1 cut(s) 1177
KspAI GTTAAC 1 cut(s) 367
Kzo9I GATC 6 cut(s) 231, 338, 486, 1177, 1524, 1744
LguI GCTCTTC 1 cut(s) 1335
LmnI GCTCC 6 cut(s) 321, 1232, 1306, 1719, 2187, 2273
Lsp1109I GCAGC 3 cut(s) 121, 364, 2032
LweI GCATC 6 cut(s) 601, 1075, 1085, 1442, 2059, 2335
MaeII ACGT 4 cut(s) 222, 1222, 1411, 1447
MaeIII GTNAC 6 cut(s) 320, 734, 1033, 1160, 1362, 1610
MalI GATC 6 cut(s) 233, 340, 488, 1179, 1526, 1746
MbiI CCGCTC 1 cut(s) 145
MboI GATC 6 cut(s) 231, 338, 486, 1177, 1524, 1744
MfeI CAATTG 2 cut(s) 1169, 1269
MhlI GDGCHC 4 cut(s) 318, 724, 1311, 1889
MlsI TGGCCA 1 cut(s) 1489
MluNI TGGCCA 1 cut(s) 1489
MlyI GAGTC 4 cut(s) 106, 1292, 1849, 1995
MmeI TCCRAC 4 cut(s) 4, 1756, 2108, 2247
Mox20I TGGCCA 1 cut(s) 1489
Mph1103I ATGCAT 2 cut(s) 1324, 1401
MroI TCCGGA 1 cut(s) 640
MroXI GAANNNNTTC 3 cut(s) 654, 1725, 2310
MscI TGGCCA 1 cut(s) 1489
MslI CAYNNNNRTG 1 cut(s) 2331
Msp20I TGGCCA 1 cut(s) 1489
MspI CCGG 2 cut(s) 311, 641
MspR9I CCNGG 3 cut(s) 311, 673, 1629
MunI CAATTG 2 cut(s) 1169, 1269
MvaI CCWGG 2 cut(s) 673, 1629
MvnI CGCG 2 cut(s) 377, 1333
MwoI GCNNNNNNNGC 4 cut(s) 41, 268, 1145, 1319
NciI CCSGG 1 cut(s) 311
NcoI CCATGG 2 cut(s) 429, 2212
NdeI CATATG 1 cut(s) 1465
NdeII GATC 6 cut(s) 231, 338, 486, 1177, 1524, 1744
NheI GCTAGC 2 cut(s) 392, 2072
NlaIII CATG 7 cut(s) 433, 493, 1403, 2063, 2216, 2244, 2336
NlaIV GGNNCC 3 cut(s) 95, 1234, 1977
NmeAIII GCCGAG 2 cut(s) 61, 1124
NmuCI GTSAC 2 cut(s) 1033, 1610
NsiI ATGCAT 2 cut(s) 1324, 1401
NspI RCATGY 1 cut(s) 2063
PaeR7I CTCGAG 1 cut(s) 155
PaqCI CACCTGC 1 cut(s) 941
PciI ACATGT 1 cut(s) 2059
PciSI GCTCTTC 1 cut(s) 1335
PdmI GAANNNNTTC 3 cut(s) 654, 1725, 2310
PfeI GAWTC 3 cut(s) 103, 461, 1352
PflFI GACNNNGTC 1 cut(s) 8
PflMI CCANNNNNTGG 1 cut(s) 1582
PkrI GCNGC 4 cut(s) 136, 147, 354, 2047
PleI GAGTC 4 cut(s) 106, 1292, 1849, 1994
PpsI GAGTC 4 cut(s) 106, 1292, 1849, 1994
Ppu21I YACGTR 1 cut(s) 1412
PscI ACATGT 1 cut(s) 2059
PshAI GACNNNNGTC 1 cut(s) 2214
PshBI ATTAAT 1 cut(s) 2126
Psp6I CCWGG 2 cut(s) 671, 1627
PspGI CCWGG 2 cut(s) 671, 1627
PspN4I GGNNCC 3 cut(s) 95, 1234, 1977
PspPI GGNCC 2 cut(s) 643, 2209
PspXI VCTCGAGB 1 cut(s) 155
PsyI GACNNNGTC 1 cut(s) 8
RsaI GTAC 7 cut(s) 404, 1066, 1221, 1410, 1732, 2255, 2291
RsaNI GTAC 7 cut(s) 403, 1065, 1220, 1409, 1731, 2254, 2290
RseI CAYNNNNRTG 1 cut(s) 2331
SapI GCTCTTC 1 cut(s) 1335
SatI GCNGC 4 cut(s) 135, 146, 353, 2046
Sau3AI GATC 6 cut(s) 231, 338, 486, 1177, 1524, 1744
Sau96I GGNCC 2 cut(s) 643, 2209
ScaI AGTACT 1 cut(s) 1066
SchI GAGTC 4 cut(s) 106, 1292, 1849, 1995
ScrFI CCNGG 3 cut(s) 311, 673, 1629
SduI GDGCHC 4 cut(s) 318, 724, 1311, 1889
SfaNI GCATC 6 cut(s) 601, 1075, 1085, 1442, 2059, 2335
Sfr274I CTCGAG 1 cut(s) 155
SinI GGWCC 2 cut(s) 643, 2209
SlaI CTCGAG 1 cut(s) 155
SmiMI CAYNNNNRTG 1 cut(s) 2331
SmlI CTYRAG 6 cut(s) 98, 114, 155, 1090, 1945, 2321
SmoI CTYRAG 6 cut(s) 98, 114, 155, 1090, 1945, 2321
SsiI CCGC 6 cut(s) 145, 359, 412, 614, 880, 1333
SspI AATATT 1 cut(s) 2124
StyD4I CCNGG 3 cut(s) 309, 671, 1627
StyI CCWWGG 3 cut(s) 429, 1550, 2212
TaaI ACNGT 4 cut(s) 478, 840, 985, 1039
TaiI ACGT 4 cut(s) 225, 1225, 1414, 1450
TaqI TCGA 9 cut(s) 156, 166, 464, 856, 1368, 1374, 1427, 1641, 1864
TatI WGTACW 2 cut(s) 1064, 2253
TauI GCSGC 1 cut(s) 148
TfiI GAWTC 3 cut(s) 103, 461, 1352
TscAI CASTG 4 cut(s) 89, 241, 1308, 2140
TseFI GTSAC 2 cut(s) 1033, 1610
TseI GCWGC 3 cut(s) 134, 352, 2045
Tsp45I GTSAC 2 cut(s) 1033, 1610
TspDTI ATGAA 7 cut(s) 5, 510, 711, 959, 1583, 1967, 2175
TspGWI ACGGA 3 cut(s) 281, 308, 1983
TspRI CASTG 4 cut(s) 89, 241, 1308, 2140
Tth111I GACNNNGTC 1 cut(s) 8
Van91I CCANNNNNTGG 1 cut(s) 1582
VpaK11BI GGWCC 2 cut(s) 643, 2209
VspI ATTAAT 1 cut(s) 2126
XapI RAATTY 7 cut(s) 469, 504, 654, 1212, 1370, 1634, 1797
XbaI TCTAGA 2 cut(s) 1936, 2218
XceI RCATGY 1 cut(s) 2063
XcmI CCANNNNNNNNNTGG 1 cut(s) 2192
XhoI CTCGAG 1 cut(s) 155
XmaJI CCTAGG 1 cut(s) 1550
XmnI GAANNNNTTC 3 cut(s) 654, 1725, 2310
ZrmI AGTACT 1 cut(s) 1066
Zsp2I ATGCAT 2 cut(s) 1324, 1401
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.