Rh4CG088900

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
OG0000042
Physical Location & Seq
Reverse (-)
15934422 .. 15981193
46772 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG088900.1

Sequence Viewer

Length: 1347 bp
ATGCCCCTCGTCATTACCAAACCAGCTGAAGAGATCGAGATGGACTTTCTTCTTGTAATTGGTAGAACTGTTGGAAAGATTTTTGAGTATACAATTGAACCAGTTGCACGCCAAATGGGTTATGCACTCTACTATAGCAAGAACATCAAGAAATTACGGAATGAAGTGGGTGACTTGGTTGATGCCAGGGAAAGGGTGCAACATGCTGTTGAAATAGAAGAAAGAAGAGGTAAAAGAATTGAAGCAGATGTCCAGAACTGGCTGACTAAAGTGAATGAGATCACGGAACAAACAAATGAGTTTCTAGGAGACGAACAGCATGCAGAGATCAAGTGTCTTCACAGCTTTTGTCCTAATATAAAGCTTCGTCATCAGTTAAGTAGGAAATCAACGAAGTTTATTCACGATGTTGCTGAACTCCATGAAAAACAAGATTTTTCCACTTTTGCGTACGAAGTTAGCCCACAAGAGTTCCCTGAAGTTTTGCCGTGCCGAGAACTAACAATGTTTCTTTTAAGCAATTCTACTGAAGATTCCTCTCGTGAAATTCCATGCAACTTCTTTAAAGAGATGAAGAAACTCCGAGTGTTGGATATAACTAATTTGAGTATATCATTGCTACCTTCATCTCTTCAATTTCTAAAAAATCTTCGAACATTGTGCTTAGATCAATGCACATTGACAGATTTAGCTCTAGTTGGAGAACTAGAGAACTTAGAAATTCTCAGCTTTCTGAAGTCCAAATTCAAAGAGTTGCCCAATGAAATTGGGAAATTGACATGTCTACGATTGTTGAATTTGACAGGCTGCTCTCAACTTGAAGTGATTTCACCTAATGTTTTATCAAGCTTGAAAAGATTAGAACACTTGAGAATGGGAGATAGCTTTAACCGATGGGAGGCTGAAGGAGTGATCCATACCGAAAGAAGTAATGCAAACCTTGAAGAACTAAGGCAGTTGCGACAGTTAACCACATTACAACTACATATCCCAGATACCAACATTCTTCCAATAGATCTTTTCACAAGTAAGTTAGAGAGATTCCAAATATGTATTGGTTCAGCATGGAAATGGGCTGATGTTAATGAAACCCTCAATGCACTAAAGCTCCAGCTCACTAGCAGCAAAGAATTGGACAAAGGTCTAAGAATGTTGCTGAAAAGAACTGAAGACTTGTACTTGGAGGGGATGGATGGTGTTTATAACAATATTTTTGATCAATTAGGTACCGAAGGTTGTCAGCAACTCAAACACCTCCATGTCCAAAAGAATGCCGAGTTTGCATACATCATTAATGGGAAGGTGCACTCCTTAAGTCGTTTGCCTTGCTTTGTCAACGTACCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

448

Amino Acids

51.66

Weight (kDa)

5.92

Isoelectric Point (pI)

49.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 159 - 372 3.9e-11 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1203
Acc65I GGTACC 1 cut(s) 1226
AccB1I GGYRCC 1 cut(s) 1226
AccI GTMKAC 2 cut(s) 89, 784
AclWI GGATC 1 cut(s) 907
AcsI RAATTY 4 cut(s) 546, 720, 743, 796
AcuI CTGAAG 6 cut(s) 48, 498, 549, 755, 924, 1188
AfaI GTAC 4 cut(s) 452, 1178, 1228, 1341
AfiI CCNNNNNNNGG 3 cut(s) 192, 589, 898
AflII CTTAAG 1 cut(s) 1312
AflIII ACRYGT 1 cut(s) 779
AgsI TTSAA 9 cut(s) 98, 212, 242, 635, 748, 796, 821, 853, 944
AjnI CCWGG 1 cut(s) 185
AluBI AGCT 9 cut(s) 26, 345, 364, 692, 729, 849, 885, 1108, 1114
AluI AGCT 9 cut(s) 26, 345, 364, 692, 729, 849, 885, 1108, 1114
Alw21I GWGCWC 1 cut(s) 1308
Alw26I GTCTC 1 cut(s) 303
Alw44I GTGCAC 1 cut(s) 1304
AlwI GGATC 1 cut(s) 907
ApaLI GTGCAC 1 cut(s) 1304
ApeKI GCWGC 2 cut(s) 807, 1122
ApoI RAATTY 4 cut(s) 546, 720, 743, 796
AseI ATTAAT 1 cut(s) 1293
Asp718I GGTACC 1 cut(s) 1226
AsuHPI GGTGA 2 cut(s) 182, 822
AsuII TTCGAA 1 cut(s) 652
BaeGI GKGCMC 1 cut(s) 1308
BanI GGYRCC 1 cut(s) 1226
BauI CACGAG 1 cut(s) 540
BbsI GAAGAC 2 cut(s) 329, 1176
Bbv12I GWGCWC 1 cut(s) 1308
BbvI GCAGC 2 cut(s) 794, 1134
BccI CCATC 4 cut(s) 34, 888, 1183, 1187
BceAI ACGGC 1 cut(s) 472
BcgI CGANNNNNNTGC 4 cut(s) 302, 336, 642, 676
BciT130I CCWGG 1 cut(s) 187
BclI TGATCA 1 cut(s) 1216
BcoDI GTCTC 1 cut(s) 303
BfaI CTAG 4 cut(s) 305, 695, 707, 1119
BfmI CTRYAG 1 cut(s) 133
BfrI CTTAAG 1 cut(s) 1312
BglII AGATCT 1 cut(s) 1015
BisI GCNGC 2 cut(s) 808, 1123
BlsI GCNGC 2 cut(s) 809, 1124
Bme1390I CCNGG 1 cut(s) 187
BmiI GGNNCC 1 cut(s) 1228
BmrFI CCNGG 1 cut(s) 187
BmsI GCATC 1 cut(s) 172
BoxI GACNNNNGTC 1 cut(s) 1140
BpiI GAAGAC 2 cut(s) 329, 1176
BpmI CTGGAG 1 cut(s) 1094
Bpu14I TTCGAA 1 cut(s) 652
BpuEI CTTGAG 1 cut(s) 889
BsaJI CCNNGG 1 cut(s) 186
BsaXI ACNNNNNCTCC 2 cut(s) 1092, 1122
Bsc4I CCNNNNNNNGG 3 cut(s) 192, 589, 898
Bse1I ACTGG 2 cut(s) 101, 263
Bse3DI GCAATG 1 cut(s) 614
BseBI CCWGG 1 cut(s) 187
BseDI CCNNGG 1 cut(s) 186
BseGI GGATG 2 cut(s) 1194, 1198
BseLI CCNNNNNNNGG 3 cut(s) 192, 589, 898
BseMI GCAATG 1 cut(s) 614
BseMII CTCAG 1 cut(s) 739
BseNI ACTGG 2 cut(s) 101, 263
BseSI GKGCMC 1 cut(s) 1308
BseXI GCAGC 2 cut(s) 794, 1134
BshNI GGYRCC 1 cut(s) 1226
BsiHKAI GWGCWC 1 cut(s) 1308
BsiWI CGTACG 1 cut(s) 450
BslI CCNNNNNNNGG 3 cut(s) 192, 589, 898
BsmAI GTCTC 1 cut(s) 303
BsmBI CGTCTC 1 cut(s) 303
BsmI GAATGC 1 cut(s) 1276
Bsp119I TTCGAA 1 cut(s) 652
Bsp1286I GDGCHC 1 cut(s) 1308
Bsp143I GATC 7 cut(s) 33, 279, 327, 667, 912, 1015, 1216
BspCNI CTCAG 1 cut(s) 738
BspLI GGNNCC 1 cut(s) 1228
BspPI GGATC 1 cut(s) 907
BspT104I TTCGAA 1 cut(s) 652
BspT107I GGYRCC 1 cut(s) 1226
BspTI CTTAAG 1 cut(s) 1312
BsrDI GCAATG 1 cut(s) 614
BsrI ACTGG 2 cut(s) 101, 263
BssECI CCNNGG 1 cut(s) 186
BssMI GATC 7 cut(s) 33, 279, 327, 667, 912, 1015, 1216
BssNAI GTATAC 1 cut(s) 90
BssSI CACGAG 1 cut(s) 540
Bst1107I GTATAC 1 cut(s) 90
Bst2BI CACGAG 1 cut(s) 540
Bst2UI CCWGG 1 cut(s) 187
Bst4CI ACNGT 2 cut(s) 70, 966
Bst6I CTCTTC 3 cut(s) 24, 220, 636
BstAFI CTTAAG 1 cut(s) 1312
BstBI TTCGAA 1 cut(s) 652
BstC8I GCNNGC 2 cut(s) 109, 321
BstDEI CTNAG 5 cut(s) 664, 715, 725, 950, 1145
BstF5I GGATG 2 cut(s) 1194, 1198
BstKTI GATC 7 cut(s) 36, 282, 330, 670, 915, 1018, 1219
BstMAI GTCTC 1 cut(s) 303
BstMBI GATC 7 cut(s) 33, 279, 327, 667, 912, 1015, 1216
BstMWI GCNNNNNNNGC 1 cut(s) 1280
BstNI CCWGG 1 cut(s) 187
BstNSI RCATGY 3 cut(s) 206, 323, 783
BstPAI GACNNNNGTC 1 cut(s) 1140
BstSCI CCNGG 1 cut(s) 185
BstSFI CTRYAG 1 cut(s) 133
BstSLI GKGCMC 1 cut(s) 1308
BstV1I GCAGC 2 cut(s) 794, 1134
BstV2I GAAGAC 2 cut(s) 329, 1176
BstX2I RGATCY 1 cut(s) 1015
BstYI RGATCY 1 cut(s) 1015
BstZ17I GTATAC 1 cut(s) 90
BtsCI GGATG 2 cut(s) 1194, 1198
Cac8I GCNNGC 2 cut(s) 109, 321
Csp6I GTAC 4 cut(s) 451, 1177, 1227, 1340
CviAII CATG 8 cut(s) 203, 320, 422, 552, 780, 1065, 1259, 1344
CviQI GTAC 4 cut(s) 451, 1177, 1227, 1340
DdeI CTNAG 5 cut(s) 664, 715, 725, 950, 1145
DpnI GATC 7 cut(s) 35, 281, 329, 669, 914, 1017, 1218
DpnII GATC 7 cut(s) 33, 279, 327, 667, 912, 1015, 1216
DraI TTTAAA 1 cut(s) 565
Eam1104I CTCTTC 3 cut(s) 24, 220, 636
EarI CTCTTC 3 cut(s) 24, 220, 636
Eco57I CTGAAG 6 cut(s) 48, 498, 549, 755, 924, 1188
EcoRII CCWGG 1 cut(s) 185
Esp3I CGTCTC 1 cut(s) 303
FaeI CATG 8 cut(s) 206, 323, 425, 555, 783, 1068, 1262, 1347
FatI CATG 8 cut(s) 202, 319, 421, 551, 779, 1064, 1258, 1343
FbaI TGATCA 1 cut(s) 1216
FblI GTMKAC 2 cut(s) 89, 784
Fnu4HI GCNGC 2 cut(s) 808, 1123
FokI GGATG 2 cut(s) 1201, 1205
Fsp4HI GCNGC 2 cut(s) 808, 1123
FspBI CTAG 4 cut(s) 305, 695, 707, 1119
GluI GCNGC 2 cut(s) 808, 1123
GsuI CTGGAG 1 cut(s) 1094
Hin1II CATG 8 cut(s) 206, 323, 425, 555, 783, 1068, 1262, 1347
HincII GTYRAC 2 cut(s) 969, 1336
HindII GTYRAC 2 cut(s) 969, 1336
HindIII AAGCTT 2 cut(s) 362, 847
HinfI GANTC 2 cut(s) 533, 1041
HpaI GTTAAC 1 cut(s) 969
HphI GGTGA 2 cut(s) 182, 822
Hpy166II GTNNAC 5 cut(s) 90, 785, 969, 1306, 1336
Hpy188I TCNGA 2 cut(s) 584, 735
Hpy188III TCNNGA 5 cut(s) 37, 148, 253, 404, 542
Hpy8I GTNNAC 5 cut(s) 90, 785, 969, 1306, 1336
HpyAV CCTTC 4 cut(s) 633, 899, 1226, 1294
HpyCH4III ACNGT 2 cut(s) 70, 966
HpyCH4IV ACGT 1 cut(s) 1338
HpyF10VI GCNNNNNNNGC 1 cut(s) 1280
HpyF3I CTNAG 5 cut(s) 664, 715, 725, 950, 1145
HpySE526I ACGT 1 cut(s) 1338
Hsp92II CATG 8 cut(s) 206, 323, 425, 555, 783, 1068, 1262, 1347
KpnI GGTACC 1 cut(s) 1230
Ksp22I TGATCA 1 cut(s) 1216
KspAI GTTAAC 1 cut(s) 969
Kzo9I GATC 7 cut(s) 33, 279, 327, 667, 912, 1015, 1216
LmnI GCTCC 1 cut(s) 1113
Lsp1109I GCAGC 2 cut(s) 794, 1134
LweI GCATC 1 cut(s) 172
MaeI CTAG 4 cut(s) 305, 695, 707, 1119
MaeII ACGT 1 cut(s) 1338
MaeIII GTNAC 1 cut(s) 170
MalI GATC 7 cut(s) 35, 281, 329, 669, 914, 1017, 1218
MboI GATC 7 cut(s) 33, 279, 327, 667, 912, 1015, 1216
MfeI CAATTG 1 cut(s) 93
MflI RGATCY 1 cut(s) 1015
MhlI GDGCHC 1 cut(s) 1308
MmeI TCCRAC 3 cut(s) 52, 570, 679
MnlI CCTC 7 cut(s) 17, 221, 547, 892, 1103, 1177, 1265
MseI TTAA 8 cut(s) 377, 515, 564, 888, 968, 1083, 1293, 1313
MslI CAYNNNNRTG 2 cut(s) 1069, 1257
MspA1I CMGCKG 1 cut(s) 26
MspCI CTTAAG 1 cut(s) 1312
MspR9I CCNGG 1 cut(s) 187
MunI CAATTG 1 cut(s) 93
Mva1269I GAATGC 1 cut(s) 1276
MvaI CCWGG 1 cut(s) 187
MwoI GCNNNNNNNGC 1 cut(s) 1280
NdeII GATC 7 cut(s) 33, 279, 327, 667, 912, 1015, 1216
NlaIII CATG 8 cut(s) 206, 323, 425, 555, 783, 1068, 1262, 1347
NlaIV GGNNCC 1 cut(s) 1228
NmeAIII GCCGAG 2 cut(s) 518, 1300
NmuCI GTSAC 1 cut(s) 170
NspI RCATGY 3 cut(s) 206, 323, 783
NspV TTCGAA 1 cut(s) 652
PaeI GCATGC 1 cut(s) 323
PciI ACATGT 1 cut(s) 779
PctI GAATGC 1 cut(s) 1276
PfeI GAWTC 2 cut(s) 533, 1041
Pfl23II CGTACG 1 cut(s) 450
PkrI GCNGC 2 cut(s) 809, 1124
PscI ACATGT 1 cut(s) 779
PshAI GACNNNNGTC 1 cut(s) 1140
PshBI ATTAAT 1 cut(s) 1293
PsiI TTATAA 1 cut(s) 1203
Psp6I CCWGG 1 cut(s) 185
PspGI CCWGG 1 cut(s) 185
PspLI CGTACG 1 cut(s) 450
PspN4I GGNNCC 1 cut(s) 1228
PsuI RGATCY 1 cut(s) 1015
PvuII CAGCTG 1 cut(s) 26
RsaI GTAC 4 cut(s) 452, 1178, 1228, 1341
RsaNI GTAC 4 cut(s) 451, 1177, 1227, 1340
RseI CAYNNNNRTG 2 cut(s) 1069, 1257
SaqAI TTAA 8 cut(s) 377, 515, 564, 888, 968, 1083, 1293, 1313
SatI GCNGC 2 cut(s) 808, 1123
Sau3AI GATC 7 cut(s) 33, 279, 327, 667, 912, 1015, 1216
ScrFI CCNGG 1 cut(s) 187
SduI GDGCHC 1 cut(s) 1308
SfaNI GCATC 1 cut(s) 172
SfcI CTRYAG 1 cut(s) 133
SfuI TTCGAA 1 cut(s) 652
SmiMI CAYNNNNRTG 2 cut(s) 1069, 1257
SmlI CTYRAG 2 cut(s) 868, 1312
SmoI CTYRAG 2 cut(s) 868, 1312
SphI GCATGC 1 cut(s) 323
SspI AATATT 1 cut(s) 1210
SspMI CTAG 4 cut(s) 305, 695, 707, 1119
StyD4I CCNGG 1 cut(s) 185
TaaI ACNGT 2 cut(s) 70, 966
TaiI ACGT 1 cut(s) 1341
TaqI TCGA 2 cut(s) 36, 652
TatI WGTACW 1 cut(s) 1176
TfiI GAWTC 2 cut(s) 533, 1041
Tru1I TTAA 8 cut(s) 377, 515, 564, 888, 968, 1083, 1293, 1313
Tru9I TTAA 8 cut(s) 377, 515, 564, 888, 968, 1083, 1293, 1313
TseFI GTSAC 1 cut(s) 170
TseI GCWGC 2 cut(s) 807, 1122
Tsp45I GTSAC 1 cut(s) 170
TspDTI ATGAA 6 cut(s) 177, 438, 587, 615, 777, 1101
TspGWI ACGGA 2 cut(s) 172, 299
Vha464I CTTAAG 1 cut(s) 1312
VneI GTGCAC 1 cut(s) 1304
VspI ATTAAT 1 cut(s) 1293
XapI RAATTY 4 cut(s) 546, 720, 743, 796
XceI RCATGY 3 cut(s) 206, 323, 783
XcmI CCANNNNNNNNNTGG 1 cut(s) 1052
XmiI GTMKAC 2 cut(s) 89, 784
XspI CTAG 4 cut(s) 305, 695, 707, 1119
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.