pycom09g18340

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
OG0000042
Physical Location & Seq
Reverse (-)
18961257 .. 18966952
5696 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g18340.3

Sequence Viewer

Length: 4326 bp
ATGGCCTTTGAATCAAGGACTTCAATGGTGAAGGAAATCATTACGGAACTGAAAAAACCTGGTATCAACAAGATTGGTGTGTACGGATTAGGGGGCGTTGGGAAGACAACACTTGCCAAAGAGATTTACAGAGAAGCTATGGAAGAGAAGTTATTTGATGATGTGGTTATAATTCTAAATTTAAAAGGAAAAAAAGACAACGAAACAATTCAAAAGGCAATTACCAAAAAGTTGAGCATGGACGTTGATGAATCTGAGGATATGGAAACAAGGGCGAATCTCCTACGGGCCAGGATAAAAGATGGGAAGACTCTTGTCATTTTAGACGATGTATTGGAAAGAATTGACTTCGTGGCAGTGGGACTTGTTGGCGTGCCGACTTGTAGTTTGTTGTTAACCTCTAGAGATCAAACAGTTCTCTGTGAGATAGGCATGCAAAAGTGTTTCCAACTTGACCTTTTAAGTGAAAAAGAAACTTGGATGTTGTTTGAGAAGATGGCAGGTGACGTGGTTAAAGACGACCGTATACGGAAAGTAGCAACCCAACTAGCAAGAAGATGTGGAGGTTTGCCGGTTTCAGTTGTCACAGTTGCAAGGGCTTCAAGAGAAGATAGTCTTTTAGAGGTATGGAAAGATGCATTGAGGCGCTTCAAAATCTTTGACAAGGACGGACCAGCAGAAAACGCAAAATTTGCTATAGAGTGGAGTTACAATCGGTTGAAGGGTGATGAGCTTAGGCCATTATTCTTGCTATGTGGAGTTATTGCAGGGGGGAGCTGTAGTATTTCTCTCAGTGACTTGTTCAAGTATAGTATGGGTTTGGGTTTGATAAAAAATGTTGATACAGTGGAAGATGCACGGAATTCATTGCATGCACTGGCTGCAAAACTAAAAAATTATTGCCTATTGCTGGATAGTTACGACCATAGTACTGTTAGAATGCATGAGCTTGTACGAGATGTTGCTGTCCAGATTGCATCTGATGATCAAAAGGCCTTTTCAAGAGCATATGGAGAGGAGGTGAAAGAATGGCCAACTGAGGATTTCCTTAAAAAATGCACAAGGATGTCCTTTAGCGGTTGCAAGATCGCCAGACTTCCTGAAGTACCTTGGGAATGCCCAGAATTAAAATTGTTGGTCTTGGAGAATGATGATATTGGCGACTCCGAGGAAATCCCAAGCAAATTTTTCGAAGGGATGAAAGAACTCAAAGTGTTGAATGTGACCAAATTCAGTATTCAGTCACTACCTCCATCTATTCAATCCCTAAAGCATCTCCACACATTGTGTTTAGATGGGTGCGAGTTGGTAGACATAACTCTTGTTGGACAGCTAACAAACTTGAAAATTCTTAGCCTCCTAAAGTCCAAGATTAAAGAGTTGCCCAAAGAAATAGTGCAATTGACTCGGCTACAATTATTGGATTTGACCGGTTGCTCTGAACTTGATCTGATCTCACCTGGTGTTATATCAAGCTTGACAAGATTAGAAGACTTGAGGATGGGTATAAAAAGCTTTAAGCAATGGGAGGGTGAAGGTCCCACTAGCGGAGGCAGTAATGCTACTATTTCGGAGCTGAAGCACTTGGCTGAACTGACTGCATTAGACATACATGTTCCAGATGCTAACCTTCTTCCAGCCAACTTGTTCTCCGATAAGTTAGAAAGATACACCATACTCATCGGTGATTGTTGGGAGTATCCTGACACGTACGAAACCTCCTCTAACATGCTAAAACTCAAGCTCACCAGGAGAAATCAATTCGACCAAGGTATAAAGTTGGTGGTAGAGAGATGTGAGCAATTGTACTTGGATGGGAAGGAGAGTGCGAATATTATTTCCTTTCTATTTGACAGTGATGCTGTGGAACAACTGAAGTGTCTCCATGTTCAAAACAACGACGAAATTACATATGTCGTTAACTTCGTCAGTTGGAGTTATTCTCATAATACCTTACCCAACCTGGAATCTCTAACTCTTGAAGACCTTGTGACTTTGGAAAGTGTATGTTATGGGCAACTTGTAGGTGAGCCCTTTCAAAAGTTAAAATCTTTGACACTTCGGAATCTACCGAAGCTTATTGGTTTCTTTTCCAAAGACAAGCGAACGATTGGTACAGATGCCGACGAAATCGTTTTGGAGGAAGAAGTTGGTGGACCACCGAGACTTTTCAGTAATGGAGAGCACAGCGGCAGCATCTCCCTTGATGACGTCATCGAGATCGCCAAGGTTATGAGGAACAGATCCATGGCCGGAGGAGCTCGCGGGAACGGCGAAGGAGATTCTCGGAACCTGCGATACGCTGGGCTGCACGGTGAACGGCAAGGACCCCAAGGATTTGCAATAGGAGATCGATCCATTGTGACGTCGAGATCGATCATTCTCGACCGACAGGGGTGTAAATTCAACGAATTTTGCACCAAAAGGGATTTATTCTTCAATCTTCCCAAATTTAGTAGTCCCCTATTGTTCGAAGGAGTAATTAAATTGAAGGGCGAGGTTATGATGCCCAACTTAACAACTTTGATTGTGCATCAATGTGATAGTTTAAGATTCTTGTTTTCAAATTCTATGGCTAAATGTCTTAGACAACTCAAAATCCTCAAGATATCCAATTGTCAAATCATGGAAGAGATAGTGGGAATTGAGGAGAATACAGATGACATGTTTGATAAGCTAAACTGTCTAGTGCTACAACATCTTCCTAACCTCGCTAGATTCAGCTCAAGAAGTTACATTAAATTTCCTTCTTTGGTGTATTTGGACCTAGACGATTGTGCTAAACTGGAGACATTCATCTTTGATGCTAAGAGTGAAAATATTACAACCAACAAAGAAGAAAGAAATACTGAGCTCTTTGATGAAAAGGTAGGATTTCCTAGCTTGGAGATGTTGTGCATATGGGACTTACCTAAGTTGAAGACAATATTCCACAACCAACTTCATTCAGATTCTTTTGGCAAGCTCAGAATTATGGATGTTCGTAGATGCCACAGTCTGATTAATATCTTTGGGCCAAGTATCATGGGAAGATTGAATGCTCTAGAGAGATTACAAATAGAGCAGTGCCAGTCACTACAAGTGGTATATGACTCATCATCTACCACTCAGTTGAATGGTTTTGAGTGCCCAAATCTAAATTCAGTTTGTATAGACTCATGTGAGAGTTTGAAAAATGTATTTCTCGCCTCAGTGGCCAAAGATCTTAAGCAACTAAATGAGTTCAGCGTCAAGAATTGTGGTTTAATGGAGGAAATTGTTGTGAAGGAAGAAGGAATTGTTGTGAAGGAAGAAGGACCACAAATGGCATACGAGGAGTTCGAGTTCCCTAGAGTAACAACTATGATATTTGATAATATGCCCCAACTTCGGAGTTTCTATCCAGGACTGCATGTTTCTAATTGGCCATCACTCAACATATTGAATTTCATTAAATGTGGTGGTGTGGAGATTTTTGCTGCTGAATTTTCAACATATCAAGACATGTTTAAGTTGGGCCACCCAATGCCAAAGGAACAACCTTTCTTTTTAATTGAGAAGGGTAAGTCATTCCTCAACTTGGAAGTGTTGGTATTGAACGAGAATATGGAGATTTGGTATGAACTGTATGGTCCACTCCCGACAGAGTTTTTGAGCAAATTAAACACAATTTGTTTTGCTACTTCACATCCCAAGTCAAATGTTTTCTTTGAGAATTTACAGAATATTGAAATGCTTGTTGTGCTCTCTGCTCCTTGGAAAGAATTATTTGTCCACGACCACCAAGGAAGTAGTAGAGGGGAAACACATGAAGTTGAGACCCTCCCACGTGTAAAGGTTTTGCAGCTCAACGAAATGCCGGAGCTGATTCATCTAGGAATGGAAAACTCCCAACCAGGGGGCCCTGTTTTTCCAAACTTGGAAGCTCTATTTTTGGAAAAATGTGGCAGATTAGAGAATCTAGCTTCAACTTTGATACCCTTTCGGAATCTAAGCTTTTTGGTCATACATAGTTGTCACGGACTGCAATACTTAATACCTTATTCCGTGGCTAAGAATTTGCAGCAACTCATGAGGTTGGAAGTTGTGTCCTGTCAAAGAATGGTAGAAATAGTAGCGAGCAAGGAAGATGATCCAGAAAATGAGATTACTTTCAGTTGCTTGCAATGTTTGAAGCTTTCTGGTCTACCAAGTTTGCAAGGCTTTTGCAGGGGAAATTGCATTTTCAAAGTCCCATCCTTCAAAACTTTGTTTGTCGAGGACTGCCAGCTGATCGACTTAAAGATTTCTTCTGATGGGTTACTCCAAAGTGATCCAAGACCAGGAAGACTACAAATAGCTAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

1442

Amino Acids

162.69

Weight (kDa)

5.38

Isoelectric Point (pI)

41.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 170
AarI CACCTGC 1 cut(s) 491
AatII GACGTC 2 cut(s) 2214, 2369
Acc36I ACCTGC 2 cut(s) 491, 2301
AccI GTMKAC 3 cut(s) 526, 1311, 4165
AccII CGCG 1 cut(s) 2265
AciI CCGC 4 cut(s) 1077, 1548, 2190, 2265
AclWI GGATC 4 cut(s) 2238, 2349, 4106, 4286
AcoI YGGCCR 4 cut(s) 1031, 2250, 3195, 3404
AcuI CTGAAG 3 cut(s) 1122, 1598, 1895
AcvI CACGTG 1 cut(s) 3809
AcyI GRCGYC 2 cut(s) 2211, 2366
AdeI CACNNNGTG 2 cut(s) 1287, 1463
AfaI GTAC 7 cut(s) 83, 931, 954, 1107, 1712, 1808, 2116
AfiI CCNNNNNNNGG 7 cut(s) 910, 1547, 3369, 3559, 3876, 3877, 4301
AflII CTTAAG 1 cut(s) 3206
AflIII ACRYGT 5 cut(s) 1612, 1707, 2664, 3483, 3808
AgeI ACCGGT 1 cut(s) 1430
AjiI CACGTC 1 cut(s) 508
AjnI CCWGG 8 cut(s) 58, 290, 1459, 1748, 1962, 3382, 3874, 4300
AjuI GAANNNNNNNTTGG 2 cut(s) 3124, 3156
AloI GAACNNNNNNTCC 2 cut(s) 3308, 3340
Alw21I GWGCWC 4 cut(s) 2187, 2263, 2856, 3726
Alw26I GTCTC 4 cut(s) 1886, 2158, 2783, 3791
AlwI GGATC 4 cut(s) 2238, 2349, 4106, 4286
ApaI GGGCCC 1 cut(s) 3884
ApeKI GCWGC 6 cut(s) 881, 2193, 2308, 3458, 3823, 4042
ArsI GACNNNNNNTTYG 4 cut(s) 370, 402, 3613, 3645
AseI ATTAAT 1 cut(s) 3003
AsiGI ACCGGT 1 cut(s) 1430
Asp700I GAANNNNTTC 1 cut(s) 207
AspLEI GCGC 1 cut(s) 648
AsuII TTCGAA 2 cut(s) 1191, 2472
AvaII GGWCC 7 cut(s) 671, 1538, 2156, 2327, 2764, 3296, 3611
BaeGI GKGCMC 2 cut(s) 3131, 3884
BalI TGGCCA 3 cut(s) 1033, 3197, 3406
BanII GRGCYC 4 cut(s) 2034, 2263, 2856, 3884
BbrPI CACGTG 1 cut(s) 3809
BbsI GAAGAC 6 cut(s) 110, 314, 1497, 1989, 2927, 4312
Bbv12I GWGCWC 4 cut(s) 2187, 2263, 2856, 3726
BbvI GCAGC 6 cut(s) 868, 2205, 2295, 3445, 3835, 4054
BccI CCATC 9 cut(s) 296, 490, 1261, 1289, 1495, 1808, 3415, 4222, 4268
BceAI ACGGC 2 cut(s) 2287, 2336
BcgI CGANNNNNNTGC 4 cut(s) 1171, 1205, 1388, 1422
BciT130I CCWGG 8 cut(s) 60, 292, 1461, 1750, 1964, 3384, 3876, 4302
BciVI GTATCC 1 cut(s) 1710
BclI TGATCA 1 cut(s) 985
BcoDI GTCTC 4 cut(s) 1886, 2158, 2783, 3791
BfmI CTRYAG 2 cut(s) 696, 778
BfoI RGCGCY 1 cut(s) 649
BfrI CTTAAG 1 cut(s) 3206
BfuAI ACCTGC 2 cut(s) 491, 2301
BfuI GTATCC 1 cut(s) 1710
BglI GCCNNNNNGGC 1 cut(s) 3194
BglII AGATCT 1 cut(s) 3202
BisI GCNGC 7 cut(s) 882, 2191, 2194, 2309, 3459, 3824, 4043
BlsI GCNGC 7 cut(s) 883, 2192, 2195, 2310, 3460, 3825, 4044
BmcAI AGTACT 1 cut(s) 931
Bme1390I CCNGG 8 cut(s) 60, 292, 1461, 1750, 1964, 3384, 3876, 4302
Bme18I GGWCC 7 cut(s) 671, 1538, 2156, 2327, 2764, 3296, 3611
BmgBI CACGTC 1 cut(s) 508
BmiI GGNNCC 5 cut(s) 1540, 2291, 2329, 3881, 3882
BmrFI CCNGG 8 cut(s) 60, 292, 1461, 1750, 1964, 3384, 3876, 4302
BoxI GACNNNNGTC 1 cut(s) 314
BpiI GAAGAC 6 cut(s) 110, 314, 1497, 1989, 2927, 4312
BplI GAGNNNNNCTC 2 cut(s) 1927, 1959
BpmI CTGGAG 1 cut(s) 2807
Bpu10I CCTNAGC 1 cut(s) 734
Bpu14I TTCGAA 2 cut(s) 1191, 2472
BpuEI CTTGAG 4 cut(s) 1516, 1724, 2588, 2710
Bsa29I ATCGAT 2 cut(s) 2353, 2375
BsaAI YACGTR 2 cut(s) 1710, 3809
BsaBI GATNNNNATC 1 cut(s) 3005
BsaHI GRCGYC 2 cut(s) 2211, 2366
BsaI GGTCTC 1 cut(s) 3791
BsaWI WCCGGW 1 cut(s) 1430
Bsc4I CCNNNNNNNGG 7 cut(s) 910, 1547, 3369, 3559, 3876, 3877, 4301
Bse118I RCCGGY 2 cut(s) 571, 1430
Bse1I ACTGG 3 cut(s) 882, 2790, 3070
Bse3DI GCAATG 3 cut(s) 866, 1529, 4151
Bse8I GATNNNNATC 1 cut(s) 3005
BseBI CCWGG 8 cut(s) 60, 292, 1461, 1750, 1964, 3384, 3876, 4302
BseCI ATCGAT 2 cut(s) 2353, 2375
BseGI GGATG 8 cut(s) 486, 1071, 1203, 1506, 1819, 2983, 3667, 4214
BseJI GATNNNNATC 1 cut(s) 3005
BseLI CCNNNNNNNGG 7 cut(s) 910, 1547, 3369, 3559, 3876, 3877, 4301
BseMI GCAATG 3 cut(s) 866, 1529, 4151
BseMII CTCAG 7 cut(s) 246, 805, 1029, 2841, 2980, 3122, 3204
BseNI ACTGG 3 cut(s) 882, 2790, 3070
BseRI GAGGAG 5 cut(s) 1031, 1711, 2271, 2663, 3329
BseSI GKGCMC 2 cut(s) 3131, 3884
BseXI GCAGC 6 cut(s) 868, 2205, 2295, 3445, 3835, 4054
BseYI CCCAGC 1 cut(s) 2303
BsgI GTGCAG 1 cut(s) 2294
Bsh1236I CGCG 1 cut(s) 2265
Bsh1285I CGRYCG 2 cut(s) 523, 2389
BshTI ACCGGT 1 cut(s) 1430
BshVI ATCGAT 2 cut(s) 2353, 2375
BsiEI CGRYCG 2 cut(s) 523, 2389
BsiHKAI GWGCWC 4 cut(s) 2187, 2263, 2856, 3726
BsiSI CCGG 4 cut(s) 572, 1431, 2253, 3839
BsiWI CGTACG 1 cut(s) 1710
BslFI GGGAC 5 cut(s) 375, 1524, 2445, 2918, 4196
BslI CCNNNNNNNGG 7 cut(s) 910, 1547, 3369, 3559, 3876, 3877, 4301
BsmAI GTCTC 4 cut(s) 1886, 2158, 2783, 3791
BsmFI GGGAC 5 cut(s) 375, 1524, 2445, 2918, 4196
BsmI GAATGC 3 cut(s) 945, 1121, 3043
Bso31I GGTCTC 1 cut(s) 3791
Bsp119I TTCGAA 2 cut(s) 1191, 2472
Bsp120I GGGCCC 1 cut(s) 3880
Bsp1286I GDGCHC 7 cut(s) 2034, 2187, 2263, 2856, 3131, 3726, 3884
Bsp19I CCATGG 1 cut(s) 2247
BspACI CCGC 4 cut(s) 1077, 1548, 2190, 2265
BspCNI CTCAG 7 cut(s) 247, 804, 1030, 2842, 2979, 3121, 3203
BspDI ATCGAT 2 cut(s) 2353, 2375
BspFNI CGCG 1 cut(s) 2265
BspHI TCATGA 1 cut(s) 4050
BspLI GGNNCC 5 cut(s) 1540, 2291, 2329, 3881, 3882
BspMI ACCTGC 2 cut(s) 491, 2301
BspPI GGATC 4 cut(s) 2238, 2349, 4106, 4286
BspT104I TTCGAA 2 cut(s) 1191, 2472
BspTI CTTAAG 1 cut(s) 3206
BspTNI GGTCTC 1 cut(s) 3791
BsrDI GCAATG 3 cut(s) 866, 1529, 4151
BsrFI RCCGGY 2 cut(s) 571, 1430
BsrI ACTGG 3 cut(s) 882, 2790, 3070
BssAI RCCGGY 2 cut(s) 571, 1430
BssNAI GTATAC 1 cut(s) 527
BssNI GRCGYC 2 cut(s) 2211, 2366
BssT1I CCWWGG 7 cut(s) 1109, 1768, 2226, 2247, 2332, 3734, 3763
Bst1107I GTATAC 1 cut(s) 527
Bst2UI CCWGG 8 cut(s) 60, 292, 1461, 1750, 1964, 3384, 3876, 4302
Bst6I CTCTTC 2 cut(s) 138, 2625
BstACI GRCGYC 2 cut(s) 2211, 2366
BstAFI CTTAAG 1 cut(s) 3206
BstAPI GCANNNNNTGC 2 cut(s) 692, 881
BstBAI YACGTR 2 cut(s) 1710, 3809
BstBI TTCGAA 2 cut(s) 1191, 2472
BstC8I GCNNGC 8 cut(s) 374, 434, 873, 2263, 2963, 4099, 4142, 4247
BstDSI CCRYGG 2 cut(s) 2247, 4026
BstF5I GGATG 8 cut(s) 486, 1071, 1203, 1506, 1819, 2983, 3667, 4214
BstFNI CGCG 1 cut(s) 2265
BstH2I RGCGCY 1 cut(s) 649
BstHHI GCGC 1 cut(s) 648
BstMAI GTCTC 4 cut(s) 1886, 2158, 2783, 3791
BstMCI CGRYCG 2 cut(s) 523, 2389
BstMWI GCNNNNNNNGC 7 cut(s) 683, 692, 881, 2258, 2271, 3194, 3721
BstNI CCWGG 8 cut(s) 60, 292, 1461, 1750, 1964, 3384, 3876, 4302
BstNSI RCATGY 7 cut(s) 436, 875, 1616, 1732, 2668, 3395, 3487
BstPAI GACNNNNGTC 1 cut(s) 314
BstSCI CCNGG 8 cut(s) 58, 290, 1459, 1748, 1962, 3382, 3874, 4300
BstSFI CTRYAG 2 cut(s) 696, 778
BstSLI GKGCMC 2 cut(s) 3131, 3884
BstUI CGCG 1 cut(s) 2265
BstV1I GCAGC 6 cut(s) 868, 2205, 2295, 3445, 3835, 4054
BstV2I GAAGAC 6 cut(s) 110, 314, 1497, 1989, 2927, 4312
BstX2I RGATCY 2 cut(s) 2243, 3202
BstYI RGATCY 2 cut(s) 2243, 3202
BstZ17I GTATAC 1 cut(s) 527
Bsu15I ATCGAT 2 cut(s) 2353, 2375
BsuI GTATCC 1 cut(s) 1710
BsuTUI ATCGAT 2 cut(s) 2353, 2375
BtgI CCRYGG 2 cut(s) 2247, 4026
BtrI CACGTC 1 cut(s) 508
BtsCI GGATG 8 cut(s) 486, 1071, 1203, 1506, 1819, 2983, 3667, 4214
BtsI GCAGTG 2 cut(s) 363, 3071
BtsIMutI CAGTG 7 cut(s) 363, 799, 852, 875, 1861, 3071, 3198
BveI ACCTGC 2 cut(s) 491, 2301
Cac8I GCNNGC 8 cut(s) 374, 434, 873, 2263, 2963, 4099, 4142, 4247
CciI TCATGA 1 cut(s) 4050
CfoI GCGC 1 cut(s) 648
Cfr10I RCCGGY 2 cut(s) 571, 1430
ClaI ATCGAT 2 cut(s) 2353, 2375
CseI GACGC 1 cut(s) 3217
CsiI ACCWGGT 2 cut(s) 58, 1459
Csp6I GTAC 7 cut(s) 82, 930, 953, 1106, 1711, 1807, 2115
CspAI ACCGGT 1 cut(s) 1430
CspCI CAANNNNNGTGG 2 cut(s) 3220, 3255
CviQI GTAC 7 cut(s) 82, 930, 953, 1106, 1711, 1807, 2115
DraI TTTAAA 1 cut(s) 183
DraIII CACNNNGTG 2 cut(s) 1287, 1463
EaeI YGGCCR 4 cut(s) 1031, 2250, 3195, 3404
Eam1104I CTCTTC 2 cut(s) 138, 2625
EarI CTCTTC 2 cut(s) 138, 2625
Ecl136II GAGCTC 2 cut(s) 2261, 2854
Eco130I CCWWGG 7 cut(s) 1109, 1768, 2226, 2247, 2332, 3734, 3763
Eco147I AGGCCT 1 cut(s) 995
Eco24I GRGCYC 4 cut(s) 2034, 2263, 2856, 3884
Eco31I GGTCTC 1 cut(s) 3791
Eco32I GATATC 1 cut(s) 2610
Eco47I GGWCC 7 cut(s) 671, 1538, 2156, 2327, 2764, 3296, 3611
Eco53kI GAGCTC 2 cut(s) 2261, 2854
Eco57I CTGAAG 3 cut(s) 1122, 1598, 1895
Eco72I CACGTG 1 cut(s) 3809
EcoICRI GAGCTC 2 cut(s) 2261, 2854
EcoO109I RGGNCCY 4 cut(s) 1538, 2327, 3880, 3881
EcoRI GAATTC 1 cut(s) 862
EcoRII CCWGG 8 cut(s) 58, 290, 1459, 1748, 1962, 3382, 3874, 4300
EcoRV GATATC 1 cut(s) 2610
EcoT14I CCWWGG 7 cut(s) 1109, 1768, 2226, 2247, 2332, 3734, 3763
EcoT22I ATGCAT 2 cut(s) 640, 945
EcoT38I GRGCYC 4 cut(s) 2034, 2263, 2856, 3884
ErhI CCWWGG 7 cut(s) 1109, 1768, 2226, 2247, 2332, 3734, 3763
FalI AAGNNNNNCTT 2 cut(s) 600, 632
FaqI GGGAC 5 cut(s) 375, 1524, 2445, 2918, 4196
FauI CCCGC 1 cut(s) 2258
FauNDI CATATG 3 cut(s) 1009, 1912, 2900
FbaI TGATCA 1 cut(s) 985
FblI GTMKAC 3 cut(s) 526, 1311, 4165
Fnu4HI GCNGC 7 cut(s) 882, 2191, 2194, 2309, 3459, 3824, 4043
FokI GGATG 8 cut(s) 493, 1078, 1210, 1513, 1826, 2990, 3654, 4201
FriOI GRGCYC 4 cut(s) 2034, 2263, 2856, 3884
Fsp4HI GCNGC 7 cut(s) 882, 2191, 2194, 2309, 3459, 3824, 4043
GlaI GCGC 1 cut(s) 647
GluI GCNGC 7 cut(s) 882, 2191, 2194, 2309, 3459, 3824, 4043
GsaI CCCAGC 1 cut(s) 2307
GsuI CTGGAG 1 cut(s) 2807
HaeII RGCGCY 1 cut(s) 649
HapII CCGG 4 cut(s) 572, 1431, 2253, 3839
HgaI GACGC 1 cut(s) 3217
HhaI GCGC 1 cut(s) 648
Hin1I GRCGYC 2 cut(s) 2211, 2366
Hin6I GCGC 1 cut(s) 646
HinP1I GCGC 1 cut(s) 646
HincII GTYRAC 2 cut(s) 396, 1921
HindII GTYRAC 2 cut(s) 396, 1921
HindIII AAGCTT 5 cut(s) 1474, 1513, 2075, 3973, 4154
HpaI GTTAAC 2 cut(s) 396, 1921
HpaII CCGG 4 cut(s) 572, 1431, 2253, 3839
Hpy99I CGWCG 3 cut(s) 1904, 2129, 2371
HpyCH4IV ACGT 6 cut(s) 243, 507, 1709, 2211, 2366, 3808
HpyF10VI GCNNNNNNNGC 7 cut(s) 683, 692, 881, 2258, 2271, 3194, 3721
HpySE526I ACGT 6 cut(s) 243, 507, 1709, 2211, 2366, 3808
Hsp92I GRCGYC 2 cut(s) 2211, 2366
HspAI GCGC 1 cut(s) 646
Ksp22I TGATCA 1 cut(s) 985
KspAI GTTAAC 2 cut(s) 396, 1921
LmnI GCTCC 5 cut(s) 774, 1573, 2258, 3736, 3841
Lsp1109I GCAGC 6 cut(s) 868, 2205, 2295, 3445, 3835, 4054
MabI ACCWGGT 2 cut(s) 58, 1459
MaeII ACGT 6 cut(s) 243, 507, 1709, 2211, 2366, 3808
MfeI CAATTG 3 cut(s) 1400, 1802, 2614
MflI RGATCY 2 cut(s) 2243, 3202
MhlI GDGCHC 7 cut(s) 2034, 2187, 2263, 2856, 3131, 3726, 3884
MlsI TGGCCA 3 cut(s) 1033, 3197, 3406
MluNI TGGCCA 3 cut(s) 1033, 3197, 3406
MlyI GAGTC 5 cut(s) 304, 1157, 1399, 3086, 3149
MmeI TCCRAC 4 cut(s) 472, 1306, 1913, 4038
Mox20I TGGCCA 3 cut(s) 1033, 3197, 3406
Mph1103I ATGCAT 2 cut(s) 640, 945
MroXI GAANNNNTTC 1 cut(s) 207
MscI TGGCCA 3 cut(s) 1033, 3197, 3406
MslI CAYNNNNRTG 2 cut(s) 1064, 2538
Msp20I TGGCCA 3 cut(s) 1033, 3197, 3406
MspA1I CMGCKG 2 cut(s) 2190, 4249
MspCI CTTAAG 1 cut(s) 3206
MspI CCGG 4 cut(s) 572, 1431, 2253, 3839
MspR9I CCNGG 8 cut(s) 60, 292, 1461, 1750, 1964, 3384, 3876, 4302
MunI CAATTG 3 cut(s) 1400, 1802, 2614
Mva1269I GAATGC 3 cut(s) 945, 1121, 3043
MvaI CCWGG 8 cut(s) 60, 292, 1461, 1750, 1964, 3384, 3876, 4302
MvnI CGCG 1 cut(s) 2265
MwoI GCNNNNNNNGC 7 cut(s) 683, 692, 881, 2258, 2271, 3194, 3721
NcoI CCATGG 1 cut(s) 2247
NdeI CATATG 3 cut(s) 1009, 1912, 2900
NlaIV GGNNCC 5 cut(s) 1540, 2291, 2329, 3881, 3882
NmeAIII GCCGAG 1 cut(s) 1387
NmuCI GTSAC 9 cut(s) 503, 583, 794, 1222, 1242, 1990, 2362, 3072, 3995
NsiI ATGCAT 2 cut(s) 640, 945
NspI RCATGY 7 cut(s) 436, 875, 1616, 1732, 2668, 3395, 3487
NspV TTCGAA 2 cut(s) 1191, 2472
PaeI GCATGC 2 cut(s) 436, 875
PagI TCATGA 1 cut(s) 4050
PaqCI CACCTGC 1 cut(s) 491
PceI AGGCCT 1 cut(s) 995
PciI ACATGT 3 cut(s) 1612, 2664, 3483
PcsI WCGNNNNNNNCGW 4 cut(s) 1923, 2293, 2372, 3318
PctI GAATGC 3 cut(s) 945, 1121, 3043
PdmI GAANNNNTTC 1 cut(s) 207
Pfl23II CGTACG 1 cut(s) 1710
PfoI TCCNGGA 1 cut(s) 3382
PinAI ACCGGT 1 cut(s) 1430
PkrI GCNGC 7 cut(s) 883, 2192, 2195, 2310, 3460, 3825, 4044
PleI GAGTC 5 cut(s) 304, 1157, 1399, 3086, 3149
PmaCI CACGTG 1 cut(s) 3809
PmlI CACGTG 1 cut(s) 3809
PpsI GAGTC 5 cut(s) 304, 1157, 1399, 3086, 3149
Ppu21I YACGTR 2 cut(s) 1710, 3809
PpuMI RGGWCCY 2 cut(s) 1538, 2327
PscI ACATGT 3 cut(s) 1612, 2664, 3483
PshAI GACNNNNGTC 1 cut(s) 314
PshBI ATTAAT 1 cut(s) 3003
PsiI TTATAA 1 cut(s) 170
Psp124BI GAGCTC 2 cut(s) 2263, 2856
Psp5II RGGWCCY 2 cut(s) 1538, 2327
Psp6I CCWGG 8 cut(s) 58, 290, 1459, 1748, 1962, 3382, 3874, 4300
PspCI CACGTG 1 cut(s) 3809
PspFI CCCAGC 1 cut(s) 2303
PspGI CCWGG 8 cut(s) 58, 290, 1459, 1748, 1962, 3382, 3874, 4300
PspLI CGTACG 1 cut(s) 1710
PspN4I GGNNCC 5 cut(s) 1540, 2291, 2329, 3881, 3882
PspOMI GGGCCC 1 cut(s) 3880
PspPPI RGGWCCY 2 cut(s) 1538, 2327
PsrI GAACNNNNNNTAC 4 cut(s) 2098, 2130, 2282, 2314
PsuI RGATCY 2 cut(s) 2243, 3202
PvuII CAGCTG 1 cut(s) 4249
RsaI GTAC 7 cut(s) 83, 931, 954, 1107, 1712, 1808, 2116
RsaNI GTAC 7 cut(s) 82, 930, 953, 1106, 1711, 1807, 2115
RseI CAYNNNNRTG 2 cut(s) 1064, 2538
SacI GAGCTC 2 cut(s) 2263, 2856
SatI GCNGC 7 cut(s) 882, 2191, 2194, 2309, 3459, 3824, 4043
ScaI AGTACT 1 cut(s) 931
SchI GAGTC 5 cut(s) 304, 1157, 1399, 3086, 3149
ScrFI CCNGG 8 cut(s) 60, 292, 1461, 1750, 1964, 3384, 3876, 4302
SduI GDGCHC 7 cut(s) 2034, 2187, 2263, 2856, 3131, 3726, 3884
SexAI ACCWGGT 2 cut(s) 58, 1459
SfcI CTRYAG 2 cut(s) 696, 778
SfuI TTCGAA 2 cut(s) 1191, 2472
SinI GGWCC 7 cut(s) 671, 1538, 2156, 2327, 2764, 3296, 3611
SmiMI CAYNNNNRTG 2 cut(s) 1064, 2538
SmlI CTYRAG 5 cut(s) 1495, 1739, 2603, 2725, 3206
SmoI CTYRAG 5 cut(s) 1495, 1739, 2603, 2725, 3206
SphI GCATGC 2 cut(s) 436, 875
SseBI AGGCCT 1 cut(s) 995
SsiI CCGC 4 cut(s) 1077, 1548, 2190, 2265
SspI AATATT 4 cut(s) 1834, 2821, 2928, 3706
SstI GAGCTC 2 cut(s) 2263, 2856
StuI AGGCCT 1 cut(s) 995
StyD4I CCNGG 8 cut(s) 58, 290, 1459, 1748, 1962, 3382, 3874, 4300
StyI CCWWGG 7 cut(s) 1109, 1768, 2226, 2247, 2332, 3734, 3763
TaiI ACGT 6 cut(s) 246, 510, 1712, 2214, 2369, 3811
TaqII GACCGA 1 cut(s) 2403
TatI WGTACW 2 cut(s) 929, 1806
TauI GCSGC 1 cut(s) 2193
TscAI CASTG 7 cut(s) 363, 799, 852, 882, 1861, 3071, 3198
TseFI GTSAC 9 cut(s) 503, 583, 794, 1222, 1242, 1990, 2362, 3072, 3995
TseI GCWGC 6 cut(s) 881, 2193, 2308, 3458, 3823, 4042
Tsp45I GTSAC 9 cut(s) 503, 583, 794, 1222, 1242, 1990, 2362, 3072, 3995
TspGWI ACGGA 7 cut(s) 59, 99, 544, 684, 874, 4014, 4015
TspRI CASTG 7 cut(s) 363, 799, 852, 882, 1861, 3071, 3198
Vha464I CTTAAG 1 cut(s) 3206
VpaK11BI GGWCC 7 cut(s) 671, 1538, 2156, 2327, 2764, 3296, 3611
VspI ATTAAT 1 cut(s) 3003
XbaI TCTAGA 2 cut(s) 401, 3043
XceI RCATGY 7 cut(s) 436, 875, 1616, 1732, 2668, 3395, 3487
XmiI GTMKAC 3 cut(s) 526, 1311, 4165
XmnI GAANNNNTTC 1 cut(s) 207
ZraI GACGTC 2 cut(s) 2212, 2367
ZrmI AGTACT 1 cut(s) 931
Zsp2I ATGCAT 2 cut(s) 640, 945
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.