Rmu_sc0000332.1_g000001

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000332.1
OG0000042
Physical Location & Seq
Forward (+)
50 .. 2537
2488 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000332.1_g000001.1.cds

Sequence Viewer

Length: 1176 bp
atgctcggaaagcaaaagtatccagaggatgcttatgaacctcaaatcactgaaattcaaatttcagaactgagagaggatcaggcttcagagattagagatgattttccaggcagtcccatccatgaggaagaggctaaagatccagtggagaaggagaagaagacggagaatgaagttcagtttggtctgagtaaatttccactcgcggttcctcaaatggagccaaatgttgcatttaagcaaagagagatatctccgaaagagggagacttgcgagaaccctcaaatcccatttctgttcttccggaagcggtacttcctctgaccgctactcaacaaaggctgcaagctgcacttgagctgctcaggcccccttccagttctagtccacactcaccagaggttgcagcagctaaggccaccctcctggaattgataaagaagcctatagatgaagtggttaaccatgatcatgatctagaatccagatttcattctgcatgtacagtcttagtcaagcagcaagtgctttctgctggggttgtccagggacttgatgcactattggtagagctttgtggctctaatctgcgttgttgtaccataactgcagatttggctgcacagaaagataaacttgatcaagaagcctctattgccaactcatttgagtctcttgtcaagatatgcgttcagcaagaacaaagttcacatcaacatgcagagaggattatgttgctcaggcaagaactgttgcttgaagaagaggctaaagctaggtctcaagccctacaggttgagctcatctccctgaagaacaaatatggggctctgtgggattccataaggtccattatttataaacaactgaacgcagccatgagcggcggagctagcttctcccacgcaccagcggtggagcatgaagcgcgtgcgtcagctccggtcagaataggaggtcgggagtttggggtttcgaaagatagtgtcctccgaattcgtttatggaggcgtcggcgggcagaggggtttatgggatttgggtgctggattgattggaggtggtggcgtgatgaaatggtggccggagatggtgttcccggtggttgcaaagggaagaagaagagagaaggagcaagaggtcaggggagagagagaaggacgcgcggctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

391

Amino Acids

43.61

Weight (kDa)

6.21

Isoelectric Point (pI)

63.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 864
AccBSI CCGCTC 1 cut(s) 888
AccII CGCG 4 cut(s) 209, 934, 1168, 1170
AccIII TCCGGA 1 cut(s) 307
AciI CCGC 8 cut(s) 209, 314, 330, 888, 891, 917, 1021, 1170
AclWI GGATC 2 cut(s) 87, 137
AcoI YGGCCR 1 cut(s) 1086
AcsI RAATTY 4 cut(s) 54, 60, 197, 999
AcuI CTGAAG 2 cut(s) 72, 836
AcyI GRCGYC 1 cut(s) 1015
AfaI GTAC 3 cut(s) 318, 508, 604
AfiI CCNNNNNNNGG 1 cut(s) 266
AgsI TTSAA 2 cut(s) 59, 764
AjnI CCWGG 3 cut(s) 109, 429, 549
AjuI GAANNNNNNNTTGG 2 cut(s) 168, 200
AloI GAACNNNNNNTCC 2 cut(s) 1083, 1115
AluBI AGCT 9 cut(s) 353, 364, 416, 577, 779, 805, 896, 900, 944
AluI AGCT 9 cut(s) 353, 364, 416, 577, 779, 805, 896, 900, 944
Alw21I GWGCWC 1 cut(s) 807
Alw26I GTCTC 3 cut(s) 264, 681, 789
AlwI GGATC 2 cut(s) 87, 137
Aor13HI TCCGGA 1 cut(s) 307
AoxI GGCC 3 cut(s) 371, 420, 1086
ApeKI GCWGC 8 cut(s) 346, 353, 364, 410, 413, 523, 623, 878
ApoI RAATTY 4 cut(s) 54, 60, 197, 999
AspLEI GCGC 2 cut(s) 934, 1170
AspS9I GGNCC 2 cut(s) 372, 852
AsuC2I CCSGG 1 cut(s) 1104
AsuHPI GGTGA 1 cut(s) 390
AsuII TTCGAA 1 cut(s) 980
AsuNHI GCTAGC 1 cut(s) 896
AvaII GGWCC 1 cut(s) 852
BanII GRGCYC 2 cut(s) 807, 835
BbsI GAAGAC 1 cut(s) 170
Bbv12I GWGCWC 1 cut(s) 807
BbvI GCAGC 8 cut(s) 333, 340, 351, 422, 425, 535, 610, 890
BccI CCATC 2 cut(s) 128, 1088
BciT130I CCWGG 3 cut(s) 111, 431, 551
BciVI GTATCC 1 cut(s) 30
BclI TGATCA 2 cut(s) 472, 643
BcnI CCSGG 1 cut(s) 1104
BcoDI GTCTC 3 cut(s) 264, 681, 789
BfaI CTAG 4 cut(s) 387, 482, 780, 897
BfmI CTRYAG 3 cut(s) 450, 612, 794
BfuI GTATCC 1 cut(s) 30
Bme1390I CCNGG 4 cut(s) 111, 431, 551, 1104
Bme18I GGWCC 1 cut(s) 852
BmgT120I GGNCC 2 cut(s) 372, 852
BmiI GGNNCC 3 cut(s) 213, 225, 374
BmrFI CCNGG 4 cut(s) 111, 431, 551, 1104
BmsI GCATC 2 cut(s) 19, 550
BmtI GCTAGC 1 cut(s) 900
BpiI GAAGAC 1 cut(s) 170
BplI GAGNNNNNCTC 2 cut(s) 794, 826
Bpu10I CCTNAGC 3 cut(s) 368, 417, 743
Bpu14I TTCGAA 1 cut(s) 980
BpuEI CTTGAG 2 cut(s) 380, 771
BpuMI CCSGG 1 cut(s) 1104
BsaBI GATNNNNATC 1 cut(s) 477
BsaHI GRCGYC 1 cut(s) 1015
BsaI GGTCTC 1 cut(s) 789
BsaJI CCNNGG 1 cut(s) 550
BsaWI WCCGGW 2 cut(s) 307, 946
BsaXI ACNNNNNCTCC 2 cut(s) 1083, 1113
Bsc4I CCNNNNNNNGG 1 cut(s) 266
Bse1I ACTGG 2 cut(s) 146, 381
Bse8I GATNNNNATC 1 cut(s) 477
BseAI TCCGGA 1 cut(s) 307
BseBI CCWGG 3 cut(s) 111, 431, 551
BseDI CCNNGG 1 cut(s) 550
BseGI GGATG 2 cut(s) 34, 120
BseJI GATNNNNATC 1 cut(s) 477
BseLI CCNNNNNNNGG 1 cut(s) 266
BseMII CTCAG 4 cut(s) 62, 182, 382, 757
BseNI ACTGG 2 cut(s) 146, 381
BseXI GCAGC 8 cut(s) 333, 340, 351, 422, 425, 535, 610, 890
BseYI CCCAGC 1 cut(s) 539
BsgI GTGCAG 2 cut(s) 339, 609
Bsh1236I CGCG 4 cut(s) 209, 934, 1168, 1170
BshFI GGCC 3 cut(s) 373, 422, 1088
BsiHKAI GWGCWC 1 cut(s) 807
BsiSI CCGG 4 cut(s) 308, 947, 1089, 1104
BslFI GGGAC 2 cut(s) 102, 567
BslI CCNNNNNNNGG 1 cut(s) 266
BsmAI GTCTC 3 cut(s) 264, 681, 789
BsmFI GGGAC 2 cut(s) 102, 567
BsnI GGCC 3 cut(s) 373, 422, 1088
Bso31I GGTCTC 1 cut(s) 789
Bsp119I TTCGAA 1 cut(s) 980
Bsp1286I GDGCHC 2 cut(s) 807, 835
Bsp13I TCCGGA 1 cut(s) 307
Bsp1407I TGTACA 1 cut(s) 506
Bsp143I GATC 5 cut(s) 79, 142, 472, 478, 643
BspACI CCGC 8 cut(s) 209, 314, 330, 888, 891, 917, 1021, 1170
BspANI GGCC 3 cut(s) 373, 422, 1088
BspCNI CTCAG 4 cut(s) 63, 183, 381, 756
BspEI TCCGGA 1 cut(s) 307
BspFNI CGCG 4 cut(s) 209, 934, 1168, 1170
BspHI TCATGA 1 cut(s) 475
BspLI GGNNCC 3 cut(s) 213, 225, 374
BspMAI CTGCAG 1 cut(s) 616
BspOI GCTAGC 1 cut(s) 900
BspPI GGATC 2 cut(s) 87, 137
BspT104I TTCGAA 1 cut(s) 980
BspTNI GGTCTC 1 cut(s) 789
BsrBI CCGCTC 1 cut(s) 888
BsrGI TGTACA 1 cut(s) 506
BsrI ACTGG 2 cut(s) 146, 381
BssECI CCNNGG 1 cut(s) 550
BssMI GATC 5 cut(s) 79, 142, 472, 478, 643
BssNI GRCGYC 1 cut(s) 1015
Bst2UI CCWGG 3 cut(s) 111, 431, 551
Bst4CI ACNGT 2 cut(s) 511, 756
Bst6I CTCTTC 3 cut(s) 126, 762, 1121
BstACI GRCGYC 1 cut(s) 1015
BstAPI GCANNNNNTGC 1 cut(s) 529
BstAUI TGTACA 1 cut(s) 506
BstBI TTCGAA 1 cut(s) 980
BstC8I GCNNGC 4 cut(s) 351, 898, 936, 1023
BstDEI CTNAG 6 cut(s) 71, 191, 368, 417, 514, 743
BstF5I GGATG 2 cut(s) 34, 120
BstFNI CGCG 4 cut(s) 209, 934, 1168, 1170
BstHHI GCGC 2 cut(s) 934, 1170
BstKTI GATC 5 cut(s) 82, 145, 475, 481, 646
BstMAI GTCTC 3 cut(s) 264, 681, 789
BstMBI GATC 5 cut(s) 79, 142, 472, 478, 643
BstMWI GCNNNNNNNGC 8 cut(s) 10, 370, 419, 529, 620, 659, 897, 931
BstNI CCWGG 3 cut(s) 111, 431, 551
BstNSI RCATGY 2 cut(s) 507, 725
BstSCI CCNGG 4 cut(s) 109, 429, 549, 1102
BstSFI CTRYAG 3 cut(s) 450, 612, 794
BstUI CGCG 4 cut(s) 209, 934, 1168, 1170
BstV1I GCAGC 8 cut(s) 333, 340, 351, 422, 425, 535, 610, 890
BstV2I GAAGAC 1 cut(s) 170
BstX2I RGATCY 1 cut(s) 142
BstXI CCANNNNNNTGG 1 cut(s) 430
BstYI RGATCY 1 cut(s) 142
BsuI GTATCC 1 cut(s) 30
BsuRI GGCC 3 cut(s) 373, 422, 1088
BtsCI GGATG 2 cut(s) 34, 120
BtsIMutI CAGTG 2 cut(s) 48, 153
Cac8I GCNNGC 4 cut(s) 351, 898, 936, 1023
CciI TCATGA 1 cut(s) 475
CfoI GCGC 2 cut(s) 934, 1170
Cfr13I GGNCC 2 cut(s) 372, 852
CseI GACGC 2 cut(s) 927, 1004
Csp6I GTAC 3 cut(s) 317, 507, 603
CviAII CATG 7 cut(s) 125, 470, 476, 504, 722, 883, 926
CviQI GTAC 3 cut(s) 317, 507, 603
DdeI CTNAG 6 cut(s) 71, 191, 368, 417, 514, 743
DpnI GATC 5 cut(s) 81, 144, 474, 480, 645
DpnII GATC 5 cut(s) 79, 142, 472, 478, 643
EaeI YGGCCR 1 cut(s) 1086
Eam1104I CTCTTC 3 cut(s) 126, 762, 1121
EarI CTCTTC 3 cut(s) 126, 762, 1121
EciI GGCGGA 1 cut(s) 906
Ecl136II GAGCTC 1 cut(s) 805
Eco24I GRGCYC 2 cut(s) 807, 835
Eco31I GGTCTC 1 cut(s) 789
Eco32I GATATC 1 cut(s) 255
Eco47I GGWCC 1 cut(s) 852
Eco53kI GAGCTC 1 cut(s) 805
Eco57I CTGAAG 2 cut(s) 72, 836
EcoICRI GAGCTC 1 cut(s) 805
EcoO109I RGGNCCY 1 cut(s) 372
EcoRI GAATTC 1 cut(s) 999
EcoRII CCWGG 3 cut(s) 109, 429, 549
EcoRV GATATC 1 cut(s) 255
EcoT38I GRGCYC 2 cut(s) 807, 835
FaeI CATG 7 cut(s) 128, 473, 479, 507, 725, 886, 929
FalI AAGNNNNNCTT 6 cut(s) 303, 335, 342, 374, 624, 656
FaqI GGGAC 2 cut(s) 102, 567
FatI CATG 7 cut(s) 124, 469, 475, 503, 721, 882, 925
FauI CCCGC 1 cut(s) 1014
FbaI TGATCA 2 cut(s) 472, 643
FokI GGATG 2 cut(s) 41, 107
FriOI GRGCYC 2 cut(s) 807, 835
FspBI CTAG 4 cut(s) 387, 482, 780, 897
GlaI GCGC 2 cut(s) 933, 1169
GsaI CCCAGC 1 cut(s) 543
HaeIII GGCC 3 cut(s) 373, 422, 1088
HapII CCGG 4 cut(s) 308, 947, 1089, 1104
HgaI GACGC 2 cut(s) 927, 1004
HhaI GCGC 2 cut(s) 934, 1170
Hin1I GRCGYC 1 cut(s) 1015
Hin1II CATG 7 cut(s) 128, 473, 479, 507, 725, 886, 929
Hin6I GCGC 2 cut(s) 932, 1168
HinP1I GCGC 2 cut(s) 932, 1168
HincII GTYRAC 1 cut(s) 466
HindII GTYRAC 1 cut(s) 466
HinfI GANTC 3 cut(s) 485, 674, 842
HpaI GTTAAC 1 cut(s) 466
HpaII CCGG 4 cut(s) 308, 947, 1089, 1104
HphI GGTGA 1 cut(s) 390
Hpy166II GTNNAC 3 cut(s) 392, 466, 713
Hpy188I TCNGA 8 cut(s) 8, 67, 91, 192, 261, 327, 953, 998
Hpy188III TCNNGA 8 cut(s) 23, 308, 476, 482, 489, 647, 685, 965
Hpy8I GTNNAC 3 cut(s) 392, 466, 713
Hpy99I CGWCG 1 cut(s) 1020
HpyAV CCTTC 4 cut(s) 148, 387, 1127, 1155
HpyCH4III ACNGT 2 cut(s) 511, 756
HpyF10VI GCNNNNNNNGC 8 cut(s) 10, 370, 419, 529, 620, 659, 897, 931
HpyF3I CTNAG 6 cut(s) 71, 191, 368, 417, 514, 743
Hsp92I GRCGYC 1 cut(s) 1015
Hsp92II CATG 7 cut(s) 128, 473, 479, 507, 725, 886, 929
HspAI GCGC 2 cut(s) 932, 1168
Kpn2I TCCGGA 1 cut(s) 307
Ksp22I TGATCA 2 cut(s) 472, 643
KspAI GTTAAC 1 cut(s) 466
Kzo9I GATC 5 cut(s) 79, 142, 472, 478, 643
LmnI GCTCC 5 cut(s) 223, 893, 922, 949, 1136
Lsp1109I GCAGC 8 cut(s) 333, 340, 351, 422, 425, 535, 610, 890
LweI GCATC 2 cut(s) 19, 550
MaeI CTAG 4 cut(s) 387, 482, 780, 897
MalI GATC 5 cut(s) 81, 144, 474, 480, 645
MbiI CCGCTC 1 cut(s) 888
MboI GATC 5 cut(s) 79, 142, 472, 478, 643
MflI RGATCY 1 cut(s) 142
MhlI GDGCHC 2 cut(s) 807, 835
MluCI AATT 5 cut(s) 54, 60, 197, 434, 999
MlyI GAGTC 1 cut(s) 683
MroI TCCGGA 1 cut(s) 307
MseI TTAA 2 cut(s) 240, 465
MslI CAYNNNNRTG 2 cut(s) 474, 720
MspA1I CMGCKG 1 cut(s) 917
MspI CCGG 4 cut(s) 308, 947, 1089, 1104
MspR9I CCNGG 4 cut(s) 111, 431, 551, 1104
MvaI CCWGG 3 cut(s) 111, 431, 551
MvnI CGCG 4 cut(s) 209, 934, 1168, 1170
MwoI GCNNNNNNNGC 8 cut(s) 10, 370, 419, 529, 620, 659, 897, 931
NciI CCSGG 1 cut(s) 1104
NdeII GATC 5 cut(s) 79, 142, 472, 478, 643
NheI GCTAGC 1 cut(s) 896
NlaIII CATG 7 cut(s) 128, 473, 479, 507, 725, 886, 929
NlaIV GGNNCC 3 cut(s) 213, 225, 374
NspI RCATGY 2 cut(s) 507, 725
NspV TTCGAA 1 cut(s) 980
PagI TCATGA 1 cut(s) 475
PfeI GAWTC 2 cut(s) 485, 842
PfoI TCCNGGA 1 cut(s) 429
PleI GAGTC 1 cut(s) 682
PpsI GAGTC 1 cut(s) 682
PsiI TTATAA 1 cut(s) 864
Psp124BI GAGCTC 1 cut(s) 807
Psp6I CCWGG 3 cut(s) 109, 429, 549
PspFI CCCAGC 1 cut(s) 539
PspGI CCWGG 3 cut(s) 109, 429, 549
PspN4I GGNNCC 3 cut(s) 213, 225, 374
PspPI GGNCC 2 cut(s) 372, 852
PstI CTGCAG 1 cut(s) 616
PsuI RGATCY 1 cut(s) 142
RsaI GTAC 3 cut(s) 318, 508, 604
RsaNI GTAC 3 cut(s) 317, 507, 603
RseI CAYNNNNRTG 2 cut(s) 474, 720
SacI GAGCTC 1 cut(s) 807
SaqAI TTAA 2 cut(s) 240, 465
Sau3AI GATC 5 cut(s) 79, 142, 472, 478, 643
Sau96I GGNCC 2 cut(s) 372, 852
SchI GAGTC 1 cut(s) 683
ScrFI CCNGG 4 cut(s) 111, 431, 551, 1104
SduI GDGCHC 2 cut(s) 807, 835
SfaNI GCATC 2 cut(s) 19, 550
SfcI CTRYAG 3 cut(s) 450, 612, 794
SfuI TTCGAA 1 cut(s) 980
SinI GGWCC 1 cut(s) 852
SmiMI CAYNNNNRTG 2 cut(s) 474, 720
SmlI CTYRAG 2 cut(s) 359, 786
SmoI CTYRAG 2 cut(s) 359, 786
Sse9I AATT 5 cut(s) 54, 60, 197, 434, 999
SsiI CCGC 8 cut(s) 209, 314, 330, 888, 891, 917, 1021, 1170
SspMI CTAG 4 cut(s) 387, 482, 780, 897
SstI GAGCTC 1 cut(s) 807
StyD4I CCNGG 4 cut(s) 109, 429, 549, 1102
TaaI ACNGT 2 cut(s) 511, 756
TaqI TCGA 1 cut(s) 980
TasI AATT 5 cut(s) 54, 60, 197, 434, 999
TatI WGTACW 1 cut(s) 506
TauI GCSGC 2 cut(s) 891, 1173
TfiI GAWTC 2 cut(s) 485, 842
Tru1I TTAA 2 cut(s) 240, 465
Tru9I TTAA 2 cut(s) 240, 465
TscAI CASTG 2 cut(s) 55, 153
TseI GCWGC 8 cut(s) 346, 353, 364, 410, 413, 523, 623, 878
TspDTI ATGAA 6 cut(s) 51, 189, 471, 485, 942, 1092
TspGWI ACGGA 1 cut(s) 182
TspRI CASTG 2 cut(s) 55, 153
VpaK11BI GGWCC 1 cut(s) 852
XapI RAATTY 4 cut(s) 54, 60, 197, 999
XbaI TCTAGA 1 cut(s) 481
XceI RCATGY 2 cut(s) 507, 725
XspI CTAG 4 cut(s) 387, 482, 780, 897
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.