Rmu_sc0000166.1_g000026

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000166.1
OG0000042
Physical Location & Seq
Forward (+)
140092 .. 141992
1901 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000166.1_g000026.1.cds

Sequence Viewer

Length: 1182 bp
atggaagaagctctaaatgcattgtatacacaggttgataaacttaagagttcttgtctattgctagacggagatgataatacatgtgtcagaatgcatgatcttgcacatgatgttgctatccggattgcgaccagagatcaacacgtcctagtaaaagatggagttgatcagttggaagaatggcaagatcaagaatcgtttaaaaagtacagtaagatctcctggtcctgttgcaatatccccagtcttcctgaagtaccttggaaatgtcctgagctggaaatgtttcgtttgcatgtcctagtctcctcgcgagccgactgtcagcctcaccagatcaacccggcgaccgtacttccagtcccagtctccccaggagccgactgcgagcacaaccgccactgttacttccagcgaagcaagggcaaagaagtccttttccgaaaggcaagaaaagaaccctgtgacgaggttggtgctctcctcgtcctgccaaaactcaaggtgttggatatttgcaatctgcctcttatgttactacctccatctcttgcattgctaaaaaccaatcttcaaacattgtgtttagatggatgcacgttggaagacatagctctagttggagagctaagcaacttggaaactcttagctttgctaactccaaggtcaaagagttgtcgaaagaaatagcgaaattgactcatctgctgttgttggacttgtcggattgccatgagcttgaagtgattccacctaatgtcatatcaagtttgacaaggctcgaagacttgagaatgattaacagttttgaaaaatgggaggctgtgggagacatcagcaaaagaaggaatgctagtcttttagagttgaaggacttttcgcagttaactgcattagaaatatatattccagttgctgatattcttccaccaaatttgttctccaataaattggagagataccatatatatattggtggtgtgtggccgaaccttatggctgaaacgaccttcaatacactaaatctcgatcttactcccagcaatcaatcggatcaaggtctaagaaggctgatgatgagatctgaagatttggccttaaatatcatggaaggtgttaattatagtttgtgtcagttagacaacgaaggtttctgcacctcaaacgtacgtctctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

393

Amino Acids

44.42

Weight (kDa)

5.18

Isoelectric Point (pI)

43.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 26
AccII CGCG 1 cut(s) 316
AccIII TCCGGA 1 cut(s) 123
AciI CCGC 1 cut(s) 400
AclWI GGATC 1 cut(s) 1065
AcoI YGGCCR 1 cut(s) 989
AcsI RAATTY 1 cut(s) 937
AcuI CTGAAG 2 cut(s) 276, 1110
AfaI GTAC 4 cut(s) 212, 261, 357, 1173
AflII CTTAAG 1 cut(s) 44
AflIII ACRYGT 2 cut(s) 83, 145
AgsI TTSAA 5 cut(s) 578, 746, 815, 874, 1018
AjiI CACGTC 1 cut(s) 148
AjnI CCWGG 2 cut(s) 224, 376
AluBI AGCT 6 cut(s) 11, 280, 617, 631, 654, 742
AluI AGCT 6 cut(s) 11, 280, 617, 631, 654, 742
Alw21I GWGCWC 2 cut(s) 396, 484
Alw26I GTCTC 3 cut(s) 313, 376, 828
AlwI GGATC 1 cut(s) 1065
AlwNI CAGNNNCTG 1 cut(s) 920
Aor13HI TCCGGA 1 cut(s) 123
AoxI GGCC 2 cut(s) 989, 1098
ApoI RAATTY 1 cut(s) 937
Asp700I GAANNNNTTC 2 cut(s) 288, 750
AspS9I GGNCC 1 cut(s) 228
AsuC2I CCSGG 1 cut(s) 347
AsuHPI GGTGA 1 cut(s) 326
AvaII GGWCC 1 cut(s) 228
BbsI GAAGAC 3 cut(s) 242, 615, 795
Bbv12I GWGCWC 2 cut(s) 396, 484
BccI CCATC 3 cut(s) 155, 556, 587
BcgI CGANNNNNNTGC 2 cut(s) 461, 495
BciT130I CCWGG 2 cut(s) 226, 378
BclI TGATCA 1 cut(s) 169
BcnI CCSGG 1 cut(s) 347
BcoDI GTCTC 3 cut(s) 313, 376, 828
BfaI CTAG 5 cut(s) 65, 152, 305, 620, 858
BfrI CTTAAG 1 cut(s) 44
BglII AGATCT 2 cut(s) 219, 1085
BlpI GCTNAGC 1 cut(s) 632
Bme1390I CCNGG 3 cut(s) 226, 347, 378
Bme18I GGWCC 1 cut(s) 228
BmgBI CACGTC 1 cut(s) 148
BmgT120I GGNCC 1 cut(s) 228
BmiI GGNNCC 1 cut(s) 382
BmrFI CCNGG 3 cut(s) 226, 347, 378
BmrI ACTGGG 2 cut(s) 240, 362
BmsI GCATC 1 cut(s) 587
BmuI ACTGGG 2 cut(s) 240, 362
BpiI GAAGAC 3 cut(s) 242, 615, 795
Bpu10I CCTNAGC 1 cut(s) 276
Bpu1102I GCTNAGC 1 cut(s) 632
BpuEI CTTGAG 2 cut(s) 488, 814
BpuMI CCSGG 1 cut(s) 347
BsaJI CCNNGG 3 cut(s) 263, 376, 666
BsaWI WCCGGW 1 cut(s) 123
Bse1I ACTGG 4 cut(s) 246, 362, 368, 914
Bse3DI GCAATG 1 cut(s) 557
BseAI TCCGGA 1 cut(s) 123
BseBI CCWGG 2 cut(s) 226, 378
BseDI CCNNGG 3 cut(s) 263, 376, 666
BseGI GGATG 1 cut(s) 602
BseMI GCAATG 1 cut(s) 557
BseMII CTCAG 1 cut(s) 267
BseNI ACTGG 4 cut(s) 246, 362, 368, 914
BseRI GAGGAG 2 cut(s) 301, 476
BseYI CCCAGC 1 cut(s) 1043
BsgI GTGCAG 1 cut(s) 1144
Bsh1236I CGCG 1 cut(s) 316
Bsh1285I CGRYCG 1 cut(s) 354
BshFI GGCC 2 cut(s) 991, 1100
BsiEI CGRYCG 1 cut(s) 354
BsiHKAI GWGCWC 2 cut(s) 396, 484
BsiSI CCGG 2 cut(s) 124, 347
BsiWI CGTACG 1 cut(s) 1171
BslFI GGGAC 1 cut(s) 350
BsmAI GTCTC 3 cut(s) 313, 376, 828
BsmFI GGGAC 1 cut(s) 350
BsmI GAATGC 2 cut(s) 99, 859
BsnI GGCC 2 cut(s) 991, 1100
Bsp1286I GDGCHC 2 cut(s) 396, 484
Bsp13I TCCGGA 1 cut(s) 123
Bsp143I GATC 9 cut(s) 100, 139, 169, 190, 219, 339, 1033, 1057, 1085
Bsp1720I GCTNAGC 1 cut(s) 632
Bsp68I TCGCGA 1 cut(s) 316
BspACI CCGC 1 cut(s) 400
BspANI GGCC 2 cut(s) 991, 1100
BspCNI CTCAG 1 cut(s) 268
BspEI TCCGGA 1 cut(s) 123
BspFNI CGCG 1 cut(s) 316
BspLI GGNNCC 1 cut(s) 382
BspPI GGATC 1 cut(s) 1065
BspTI CTTAAG 1 cut(s) 44
BsrDI GCAATG 1 cut(s) 557
BsrI ACTGG 4 cut(s) 246, 362, 368, 914
BssECI CCNNGG 3 cut(s) 263, 376, 666
BssMI GATC 9 cut(s) 100, 139, 169, 190, 219, 339, 1033, 1057, 1085
BssNAI GTATAC 1 cut(s) 27
BssT1I CCWWGG 2 cut(s) 263, 666
Bst1107I GTATAC 1 cut(s) 27
Bst2UI CCWGG 2 cut(s) 226, 378
Bst4CI ACNGT 5 cut(s) 215, 326, 355, 407, 809
BstAFI CTTAAG 1 cut(s) 44
BstC8I GCNNGC 2 cut(s) 318, 392
BstDEI CTNAG 4 cut(s) 276, 632, 650, 1067
BstF5I GGATG 1 cut(s) 602
BstFNI CGCG 1 cut(s) 316
BstKTI GATC 9 cut(s) 103, 142, 172, 193, 222, 342, 1036, 1060, 1088
BstMAI GTCTC 3 cut(s) 313, 376, 828
BstMBI GATC 9 cut(s) 100, 139, 169, 190, 219, 339, 1033, 1057, 1085
BstMCI CGRYCG 1 cut(s) 354
BstMWI GCNNNNNNNGC 1 cut(s) 17
BstNI CCWGG 2 cut(s) 226, 378
BstNSI RCATGY 2 cut(s) 87, 302
BstSCI CCNGG 3 cut(s) 224, 345, 376
BstUI CGCG 1 cut(s) 316
BstV2I GAAGAC 3 cut(s) 242, 615, 795
BstX2I RGATCY 2 cut(s) 219, 1085
BstXI CCANNNNNNTGG 1 cut(s) 955
BstYI RGATCY 2 cut(s) 219, 1085
BstZ17I GTATAC 1 cut(s) 27
BsuRI GGCC 2 cut(s) 991, 1100
BtrI CACGTC 1 cut(s) 148
BtsCI GGATG 1 cut(s) 602
BtsIMutI CAGTG 1 cut(s) 403
BtuMI TCGCGA 1 cut(s) 316
Cac8I GCNNGC 2 cut(s) 318, 392
CaiI CAGNNNCTG 1 cut(s) 920
Cfr13I GGNCC 1 cut(s) 228
Csp6I GTAC 4 cut(s) 211, 260, 356, 1172
CspCI CAANNNNNGTGG 2 cut(s) 921, 956
CviAII CATG 6 cut(s) 84, 98, 110, 299, 737, 1111
CviQI GTAC 4 cut(s) 211, 260, 356, 1172
DdeI CTNAG 4 cut(s) 276, 632, 650, 1067
DpnI GATC 9 cut(s) 102, 141, 171, 192, 221, 341, 1035, 1059, 1087
DpnII GATC 9 cut(s) 100, 139, 169, 190, 219, 339, 1033, 1057, 1085
DraI TTTAAA 1 cut(s) 205
EaeI YGGCCR 1 cut(s) 989
Eco130I CCWWGG 2 cut(s) 263, 666
Eco47I GGWCC 1 cut(s) 228
Eco57I CTGAAG 2 cut(s) 276, 1110
EcoRII CCWGG 2 cut(s) 224, 376
EcoT14I CCWWGG 2 cut(s) 263, 666
EcoT22I ATGCAT 2 cut(s) 22, 99
ErhI CCWWGG 2 cut(s) 263, 666
FaeI CATG 6 cut(s) 87, 101, 113, 302, 740, 1114
FalI AAGNNNNNCTT 2 cut(s) 423, 455
FaqI GGGAC 1 cut(s) 350
FatI CATG 6 cut(s) 83, 97, 109, 298, 736, 1110
FbaI TGATCA 1 cut(s) 169
FblI GTMKAC 1 cut(s) 26
FokI GGATG 1 cut(s) 609
FspBI CTAG 5 cut(s) 65, 152, 305, 620, 858
GsaI CCCAGC 1 cut(s) 1047
HaeIII GGCC 2 cut(s) 991, 1100
HapII CCGG 2 cut(s) 124, 347
Hin1II CATG 6 cut(s) 87, 101, 113, 302, 740, 1114
HincII GTYRAC 1 cut(s) 891
HindII GTYRAC 1 cut(s) 891
HinfI GANTC 3 cut(s) 197, 703, 751
HpaI GTTAAC 1 cut(s) 891
HpaII CCGG 2 cut(s) 124, 347
HphI GGTGA 1 cut(s) 326
Hpy166II GTNNAC 2 cut(s) 27, 891
Hpy188I TCNGA 6 cut(s) 92, 446, 730, 1057, 1090, 1181
Hpy188III TCNNGA 6 cut(s) 124, 194, 254, 275, 315, 1031
Hpy8I GTNNAC 2 cut(s) 27, 891
HpyAV CCTTC 6 cut(s) 843, 868, 1024, 1065, 1109, 1145
HpyCH4III ACNGT 5 cut(s) 215, 326, 355, 407, 809
HpyCH4IV ACGT 4 cut(s) 147, 602, 1170, 1174
HpyF10VI GCNNNNNNNGC 1 cut(s) 17
HpyF3I CTNAG 4 cut(s) 276, 632, 650, 1067
HpySE526I ACGT 4 cut(s) 147, 602, 1170, 1174
Hsp92II CATG 6 cut(s) 87, 101, 113, 302, 740, 1114
Kpn2I TCCGGA 1 cut(s) 123
Ksp22I TGATCA 1 cut(s) 169
KspAI GTTAAC 1 cut(s) 891
Kzo9I GATC 9 cut(s) 100, 139, 169, 190, 219, 339, 1033, 1057, 1085
LmnI GCTCC 1 cut(s) 380
LweI GCATC 1 cut(s) 587
MaeI CTAG 5 cut(s) 65, 152, 305, 620, 858
MaeII ACGT 4 cut(s) 147, 602, 1170, 1174
MaeIII GTNAC 3 cut(s) 407, 467, 537
MalI GATC 9 cut(s) 102, 141, 171, 192, 221, 341, 1035, 1059, 1087
MboI GATC 9 cut(s) 100, 139, 169, 190, 219, 339, 1033, 1057, 1085
MboII GAAGA 8 cut(s) 17, 191, 242, 566, 620, 800, 920, 1103
MflI RGATCY 2 cut(s) 219, 1085
MhlI GDGCHC 2 cut(s) 396, 484
MluCI AATT 4 cut(s) 698, 937, 953, 1123
MlyI GAGTC 1 cut(s) 697
MmeI TCCRAC 6 cut(s) 156, 492, 585, 604, 699, 708
MnlI CCTC 8 cut(s) 322, 342, 466, 497, 540, 555, 817, 1174
Mph1103I ATGCAT 2 cut(s) 22, 99
MroI TCCGGA 1 cut(s) 123
MroXI GAANNNNTTC 2 cut(s) 288, 750
MseI TTAA 6 cut(s) 45, 204, 804, 890, 1103, 1122
MspCI CTTAAG 1 cut(s) 44
MspI CCGG 2 cut(s) 124, 347
MspR9I CCNGG 3 cut(s) 226, 347, 378
Mva1269I GAATGC 2 cut(s) 99, 859
MvaI CCWGG 2 cut(s) 226, 378
MvnI CGCG 1 cut(s) 316
MwoI GCNNNNNNNGC 1 cut(s) 17
NciI CCSGG 1 cut(s) 347
NdeII GATC 9 cut(s) 100, 139, 169, 190, 219, 339, 1033, 1057, 1085
NlaIII CATG 6 cut(s) 87, 101, 113, 302, 740, 1114
NlaIV GGNNCC 1 cut(s) 382
NmuCI GTSAC 1 cut(s) 467
NruI TCGCGA 1 cut(s) 316
NsiI ATGCAT 2 cut(s) 22, 99
NspI RCATGY 2 cut(s) 87, 302
PciI ACATGT 1 cut(s) 83
PctI GAATGC 2 cut(s) 99, 859
PdmI GAANNNNTTC 2 cut(s) 288, 750
PfeI GAWTC 2 cut(s) 197, 751
Pfl23II CGTACG 1 cut(s) 1171
PleI GAGTC 1 cut(s) 697
PpsI GAGTC 1 cut(s) 697
PscI ACATGT 1 cut(s) 83
Psp6I CCWGG 2 cut(s) 224, 376
PspFI CCCAGC 1 cut(s) 1043
PspGI CCWGG 2 cut(s) 224, 376
PspLI CGTACG 1 cut(s) 1171
PspN4I GGNNCC 1 cut(s) 382
PspPI GGNCC 1 cut(s) 228
PstNI CAGNNNCTG 1 cut(s) 920
PsuI RGATCY 2 cut(s) 219, 1085
RruI TCGCGA 1 cut(s) 316
RsaI GTAC 4 cut(s) 212, 261, 357, 1173
RsaNI GTAC 4 cut(s) 211, 260, 356, 1172
SaqAI TTAA 6 cut(s) 45, 204, 804, 890, 1103, 1122
Sau3AI GATC 9 cut(s) 100, 139, 169, 190, 219, 339, 1033, 1057, 1085
Sau96I GGNCC 1 cut(s) 228
SchI GAGTC 1 cut(s) 697
ScrFI CCNGG 3 cut(s) 226, 347, 378
SduI GDGCHC 2 cut(s) 396, 484
SfaNI GCATC 1 cut(s) 587
SinI GGWCC 1 cut(s) 228
SmlI CTYRAG 3 cut(s) 44, 503, 793
SmoI CTYRAG 3 cut(s) 44, 503, 793
Sse9I AATT 4 cut(s) 698, 937, 953, 1123
SsiI CCGC 1 cut(s) 400
SspMI CTAG 5 cut(s) 65, 152, 305, 620, 858
StyD4I CCNGG 3 cut(s) 224, 345, 376
StyI CCWWGG 2 cut(s) 263, 666
TaaI ACNGT 5 cut(s) 215, 326, 355, 407, 809
TaiI ACGT 4 cut(s) 150, 605, 1173, 1177
TaqI TCGA 3 cut(s) 683, 786, 1032
TasI AATT 4 cut(s) 698, 937, 953, 1123
TatI WGTACW 1 cut(s) 210
TfiI GAWTC 2 cut(s) 197, 751
Tru1I TTAA 6 cut(s) 45, 204, 804, 890, 1103, 1122
Tru9I TTAA 6 cut(s) 45, 204, 804, 890, 1103, 1122
TscAI CASTG 1 cut(s) 410
TseFI GTSAC 1 cut(s) 467
Tsp45I GTSAC 1 cut(s) 467
TspGWI ACGGA 1 cut(s) 84
TspRI CASTG 1 cut(s) 410
Vha464I CTTAAG 1 cut(s) 44
VpaK11BI GGWCC 1 cut(s) 228
XapI RAATTY 1 cut(s) 937
XceI RCATGY 2 cut(s) 87, 302
XcmI CCANNNNNNNNNTGG 1 cut(s) 974
XmiI GTMKAC 1 cut(s) 26
XmnI GAANNNNTTC 2 cut(s) 288, 750
XspI CTAG 5 cut(s) 65, 152, 305, 620, 858
Zsp2I ATGCAT 2 cut(s) 22, 99
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.