pycom08g06950

disease resistance

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
Physical Location & Seq
Forward (+)
5533654 .. 5538421
4768 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g06950.3

Sequence Viewer

Length: 4296 bp
ATGGAGATTGTTAATCAAATTGTCGGAAAAGTTGCCGAGTATGCACTTGAACCAGCTATACGCCAAGTGGGTTACCAACTTCACTGCAAAAGAAACCTCGAGAGTCTACAGACTCAAGTGAACGAATTAGGTGCCGCTAGAGAGCGGCTAGAGCGCGAGGTTGTTCGAGTTGAAGAAAAAGGTGAAAAAATCCACACTGACGTCCTGAACTGGCGGAAAAGCGTGGTTGAGATCACCGAGAAGGCGAAGGAATTATGCAAGCCTGATACGCAAGCAAAGAGGAGCTGTCTCCGTGGGGTTTGTCCAAACCCGGTGCTCCGTTACAAGCTAGGCAGGAGATCAACAAAGTTGGAGCAGGCGGTTGTTGAGCTCTACGCAAAAAGAGATTTCGCTATCATTTCGTACAATGTCCGCCCACAAGAGGTATCCATGGTATCTGACAAACAGTATGAGGTATTTGATTCGAGGACTTCAACTGTAAAGGAAATCATGGATGAACTGAGAATTCCTAATACCGACTTGATTTTGGTGTATGGTATTGGAGGCGTGGGGAAGACCACACTGGTTGAAGAAGTCCTTAGGCAAGCTCTAAAAGAAAAGTTATTTACTGATGCGGTTATGGTAAGAAGTGTGCAAAATCCGGACCTTGAAGGAATTCAAAAAGAAATTGCCAGAAAGTTAGGTATGGAAGTTTATGAAAGCGAAACTATGTCAGAAAGAGCACTTCGTCTATGTAACAGGATAAAAGCCAAGAAAGTTCTTGTAATTTTAGACAACATTTGGGAAAGCATTGACTTGCAGAGTGTAGGACTTCCTTGTCTGCCGACTTGTAGAATACTGTTGACATCCAGAGCTCGAAAATTGCTATCCTCAGAGAAGCGGTTGCAAAAAGACTTTCTGCTTGAAGTTTTAAACGAGGAAGAAGCTTGGCGTTTATTTGAGATGAAGGCAGGTGGTGTTGTTAAAAATCCCAATATACAAACTGTGGCAACTGAAGTAGCCAAAAAATGCGGAGGTTTGCCAGTTTTGGTTGTCACAGTCGCAAGCTCTTTAAGAAATAGAAGTACTTTACCAGTATGGAGGGATGCCTTGAGATGCCTAAAAGTGTTTGACAACGAACACTCAGCCGAACACAAAGCATACTCGGCTTTAGAGTGGAGTTACAATCAATTGGATGATCAAAAGCTTAAGCCCCTATTCTTGATATGTGGAATGTTGGCACGTCTTGGGGGAGCCTACGCTACTTTGACAAACTTGTTGAAATATACAATTGGTTTGGGTTTGTTTAATAACATTGACTTAGTGGAGCACGCACAATATGCATTGCACTCGCGGATTGAAGAGCTTAAAGATTCTTGTCTGTTACTCGAATCTGAGGATAATACATCATTCACAATGCATGATATGGTACACAATGTTGCCATCTCGATTGCATCCAAAGGCCAACATGCCTTATTAAGAACATATGGAGATGAGTTGAAGGAATGGCCAAACAATAAGGATTTTTTGGAAAATTGCAAAATGATCTCTTTGCCTTGCAAAAACATCCCTAGGCTTCCTGAAGTTTTGAAATGCCAACAACTGGAGTTTTTTCATTTGCAATATAATGGTGACTTGCTTGAAATCCCAGGTAACTTTTTCGAGGAGATGAGAAAGCTTAAAGTTATGGATTTCACCAATGTGCATATTTGGTCGTTACCTCCATCTCTTCTGCTCCTAGAAAATCTTCGTACATTGTGTTTGGATCAATGCGTGGTGGGAGACGTAACTCTAGTTGGACAGCTATCGCAACTAGAAATTCTCAGCTTTAGATATTCCAAGCTTAAAGAGTTACCGAAAGAAATAGGGAAATTGACTCGTCTTCGACTGCTGGATTTAAGCTGGTGCTCTGAGCTCAAAATGATTTCACCTAATGTTATATCAAGTTTGAAAAGTCTAGAAGACTTGAGAATGAAAAACAGCTTCAACGGATGGGTGCCAGAAGGAATCACCGGAGAAAGAAGTAATGCTAGCCTTTTGGAACTGAAGGACTTGCCTCGTTTAGCTGCATTAAGCGTACATGTTCCAGATGCTAGCAGTATTCCGACAGACTTGTTCACAGACAAGTTAAAAAGATACGAAATATTAATCGGCACTGCGCCAAAATGGGACGATGTGGATGAAACCCTCAATACATTGAAGCTCCACCTCCCAACTGGCTGTGAATTGGACCACGGTCTAGAAATGTTGTTGAAGAGGTCATGTGAAGATTTGTACTTGGATGGATCGGAGGGAGCTGATAATGTTGTGTACCACTCAGGTAGTGAAGATTTTCAACAACTTAAGCATCTCCATGTGAAAAACAATGCCCAATTTACACATATCATTACTGAGGAGGTATGCCTTTGGTGTCGTTCTTTCCCATTTATGCCATATCATTACTTCTTTGGTATATCACTCAATTTTCAATGTATTACTCAATTTTCGTTGGTTGTGTTGCCGAACTTAACAAGCTTGGTGGTGGATCAATGTACTGGTTTAACTTTTGTGTTATCGTCTCCCATGGCTAGGAATCTTGTACAACTTAAAAAACTAGAGATAACCGGATGTGAATCAATGGAAGAGATAGTTTCAATAGAAGAATATGGTGAAGAAAAACCGGATGGCATGTTTTGTAAGCTACAACATATGAAGCTAAGAGATCTTCCAAAACTCTCTAGATTCTGTTCAGTAAGCTGTAATGTCCAGTTTCCATCTTTGGAGAGTTTGAAATTAAAGAATTGTACAGAACTGAAAGGATTTGTCTTTGAACCTAAACTTGAGACTGAAGAACTATACTTTCTTTTTGACGACAAGGTAGGGTTTCCAAAGTTGGAGATATTGTCCATCTTTGGGCTATCTACTTTGACTACAGTATGGCGCAACCAACTTGATCCAGACTCTTTCTACAAACTTAGAGATGTTGAAGTTATCGAATGCCATAGTCTAATAAGCATCTTTACACCTAGCATTGCAGGAAGATTGAATGCTTTAGGAAGTTTATTGATAAGTTCGTGCAGTTGTTTAGAGGTGGTTTTTGAGATCGAAGAAACACCTTACACCTCTACGACTCAGTTGAAAATGTCTGGTTGTGAAAATCTAGATTCGGTATTTATAGATGACTGTAAGAGTTTGAAATATATTTTTCCATGCTCAGTGGCTAGAGATCTTCAGCAACTACGAGAGCTAAAAGTGAAGTTCTGTTCTGGAGTGGAGGAAATAATTTCCAAGGAAGAGGGACTAGAAATGATGCCCAAGTTTGTGTTTCCAAAATCAACAAATATTGAATTTATCTGTCTAGCCCAACTTAAGAGCTTCTATCCAGGAATGCATGCTTCCGAATGGCCGCTACTCGAACAAGTGGATGTGAAGGAATGTGGTAAATTGGACATTTTTGCCTCTGAAATTTCAAGTTTCCAGAAGCATGAGTTTGGAGGTCTTTACACTCCAATTAAACACTCTCTGTTCTTAATTGACAAGGATGTATCATTCCCCAACTTGGAAAACATGAACTTAGGCAGAGACATGGAGATATGGTGTGGTCCATCCTCATCACAGGTGTTTAGGAAACTAAAATCGTTGGTGTTTGAGTACTCCGACCAGAAAGTTTCTTTATTTGAGAATAGTGTACATCCAGATGTGACCTTCCCACATTTAAGTGTTTTGAAGCTTAAGGAAATGCGGAAGTTGATGCATCTACACAACGAGAATTTCCCAGGGGCAGACCCAGTTTTTCCAAACTTGAAAGTTCTACATGTGGTTGCTTGTGCTGCATTGAAGGATCCGGTGTTATCTGCTATTCCCTTCAAGAATTTAACAACTTTGGAAGTAGTTGGTTGTCATAGGTTGAAATATTTAACAACTTACACGATAGCCAAAACTTTAAAGCGGCTAAGAGAAATGACGGTTGGGCATTGTAAAAGAATGAGAGGAATAGGGGCAACGACGTCAGATGCAGGAAATGATGGTGAGATTTGTTTTAGCCAGTTGCAAAGTTTGAAACTTTACTCTCTACCACGTCTGCAAGATTTCTTCTCTGGAAATTGCATTGTCAAATTCCGATCCTTGAAAACCGTACATATATACAAATGCCCTGAGTTGAAGATTAACTGCCTTGAGTGGAAGAGTTCCCCAGAACTAGGAGTGCAGATAACAGAGGAGGTAGTACGAGATTATTATTGGTGTCACAAGGACGACGACGACGACAATGAAGTTGATGCAGATGGTGGTCTTGGTGATGGTAATGAATCTAATGATGATGTTTACGGTAGATGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1432

Amino Acids

162.9

Weight (kDa)

5.84

Isoelectric Point (pI)

43.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 941
AasI GACNNNNNNGTC 1 cut(s) 816
AatII GACGTC 2 cut(s) 204, 3968
Acc36I ACCTGC 1 cut(s) 941
AccB1I GGYRCC 2 cut(s) 131, 1975
AccB7I CCANNNNNTGG 1 cut(s) 1582
AccBSI CCGCTC 1 cut(s) 145
AccI GTMKAC 1 cut(s) 106
AccII CGCG 2 cut(s) 156, 1333
AccIII TCCGGA 1 cut(s) 640
AclWI GGATC 7 cut(s) 1752, 2272, 2511, 2906, 3794, 3807, 4074
AcoI YGGCCR 2 cut(s) 1487, 3362
AcsI RAATTY 8 cut(s) 504, 654, 1797, 3305, 3423, 3727, 3829, 4073
AcuI CTGAAG 5 cut(s) 1014, 1581, 2045, 2826, 3173
AcyI GRCGYC 2 cut(s) 201, 3965
AfiI CCNNNNNNNGG 6 cut(s) 421, 1582, 2547, 2871, 3517, 4157
AflII CTTAAG 4 cut(s) 1187, 2321, 3326, 3689
AflIII ACRYGT 2 cut(s) 2059, 3772
AjiI CACGTC 2 cut(s) 1223, 4037
AjnI CCWGG 3 cut(s) 1627, 3340, 3733
AjuI GAANNNNNNNTTGG 2 cut(s) 3909, 3941
AleI CACNNNNGTG 1 cut(s) 1679
Alw21I GWGCWC 7 cut(s) 318, 372, 724, 856, 1311, 1889, 1896
Alw26I GTCTC 5 cut(s) 293, 1755, 2541, 2795, 3534
AlwI GGATC 7 cut(s) 1752, 2272, 2511, 2906, 3794, 3807, 4074
Ama87I CYCGRG 1 cut(s) 98
Aor13HI TCCGGA 1 cut(s) 640
AoxI GGCC 3 cut(s) 1441, 1487, 3362
ApeKI GCWGC 2 cut(s) 2045, 3788
ApoI RAATTY 8 cut(s) 504, 654, 1797, 3305, 3423, 3727, 3829, 4073
AseI ATTAAT 1 cut(s) 2126
Asp700I GAANNNNTTC 3 cut(s) 654, 1725, 2310
AspA2I CCTAGG 1 cut(s) 1550
AspLEI GCGC 3 cut(s) 156, 2140, 2901
AspS9I GGNCC 3 cut(s) 643, 2209, 3560
AsuC2I CCSGG 1 cut(s) 311
AsuHPI GGTGA 9 cut(s) 194, 226, 1622, 1666, 1899, 1981, 2639, 3998, 4265
AsuNHI GCTAGC 2 cut(s) 2009, 2072
AvaI CYCGRG 1 cut(s) 98
AvaII GGWCC 3 cut(s) 643, 2209, 3560
AvrII CCTAGG 1 cut(s) 1550
AxyI CCTNAGG 1 cut(s) 578
BalI TGGCCA 1 cut(s) 1489
BamHI GGATCC 1 cut(s) 3799
BanI GGYRCC 2 cut(s) 131, 1975
BanII GRGCYC 3 cut(s) 372, 856, 1896
BbsI GAAGAC 3 cut(s) 560, 1853, 1947
Bbv12I GWGCWC 7 cut(s) 318, 372, 724, 856, 1311, 1889, 1896
BbvI GCAGC 2 cut(s) 2032, 3775
BcgI CGANNNNNNTGC 4 cut(s) 113, 147, 1311, 1345
BciT130I CCWGG 3 cut(s) 1629, 3342, 3735
BciVI GTATCC 1 cut(s) 436
BclI TGATCA 1 cut(s) 1177
BcnI CCSGG 1 cut(s) 311
BcoDI GTCTC 5 cut(s) 293, 1755, 2541, 2795, 3534
BfmI CTRYAG 2 cut(s) 107, 2889
BfrI CTTAAG 4 cut(s) 1187, 2321, 3326, 3689
BfuAI ACCTGC 1 cut(s) 941
BfuI GTATCC 1 cut(s) 436
BglII AGATCT 2 cut(s) 2680, 3184
BisI GCNGC 6 cut(s) 135, 146, 2046, 3365, 3789, 3908
BlnI CCTAGG 1 cut(s) 1550
BlsI GCNGC 6 cut(s) 136, 147, 2047, 3366, 3790, 3909
BmcAI AGTACT 2 cut(s) 1066, 3611
Bme1390I CCNGG 4 cut(s) 311, 1629, 3342, 3735
Bme18I GGWCC 3 cut(s) 643, 2209, 3560
BmeT110I CYCGRG 1 cut(s) 98
BmgBI CACGTC 2 cut(s) 1223, 4037
BmgT120I GGNCC 3 cut(s) 643, 2209, 3560
BmiI GGNNCC 4 cut(s) 133, 1234, 1977, 3801
BmrFI CCNGG 4 cut(s) 311, 1629, 3342, 3735
BmrI ACTGGG 1 cut(s) 3740
BmtI GCTAGC 2 cut(s) 2013, 2076
BmuI ACTGGG 1 cut(s) 3740
BoxI GACNNNNGTC 1 cut(s) 2214
BpiI GAAGAC 3 cut(s) 560, 1853, 1947
BpmI CTGGAG 2 cut(s) 1604, 3246
BpuEI CTTGAG 5 cut(s) 99, 1111, 1966, 2819, 4154
BpuMI CCSGG 1 cut(s) 311
BsaBI GATNNNNATC 1 cut(s) 2590
BsaHI GRCGYC 2 cut(s) 201, 3965
BsaJI CCNNGG 9 cut(s) 292, 429, 1550, 1627, 2212, 2541, 3246, 3733, 3734
BsaWI WCCGGW 5 cut(s) 640, 1991, 2582, 2638, 3802
BsaXI ACNNNNNCTCC 4 cut(s) 2846, 2876, 3539, 3569
Bsc4I CCNNNNNNNGG 6 cut(s) 421, 1582, 2547, 2871, 3517, 4157
Bse21I CCTNAGG 1 cut(s) 578
Bse3DI GCAATG 2 cut(s) 1322, 2988
Bse8I GATNNNNATC 1 cut(s) 2590
BseAI TCCGGA 1 cut(s) 640
BseBI CCWGG 3 cut(s) 1629, 3342, 3735
BseDI CCNNGG 9 cut(s) 292, 429, 1550, 1627, 2212, 2541, 3246, 3733, 3734
BseJI GATNNNNATC 1 cut(s) 2590
BseLI CCNNNNNNNGG 6 cut(s) 421, 1582, 2547, 2871, 3517, 4157
BseMI GCAATG 2 cut(s) 1322, 2988
BseRI GAGGAG 4 cut(s) 295, 1658, 2387, 4190
BseXI GCAGC 2 cut(s) 2032, 3775
BsgI GTGCAG 2 cut(s) 3055, 4184
Bsh1236I CGCG 2 cut(s) 156, 1333
BshFI GGCC 3 cut(s) 1443, 1489, 3364
BshNI GGYRCC 2 cut(s) 131, 1975
BsiHKAI GWGCWC 7 cut(s) 318, 372, 724, 856, 1311, 1889, 1896
BsiHKCI CYCGRG 1 cut(s) 98
BsiSI CCGG 6 cut(s) 311, 641, 1992, 2583, 2639, 3803
BslFI GGGAC 2 cut(s) 2162, 3270
BslI CCNNNNNNNGG 6 cut(s) 421, 1582, 2547, 2871, 3517, 4157
BsmAI GTCTC 5 cut(s) 293, 1755, 2541, 2795, 3534
BsmBI CGTCTC 2 cut(s) 1755, 2541
BsmFI GGGAC 2 cut(s) 2162, 3270
BsmI GAATGC 3 cut(s) 2960, 3010, 3351
BsnI GGCC 3 cut(s) 1443, 1489, 3364
BsoBI CYCGRG 1 cut(s) 98
Bsp1286I GDGCHC 7 cut(s) 318, 372, 724, 856, 1311, 1889, 1896
Bsp13I TCCGGA 1 cut(s) 640
Bsp1407I TGTACA 3 cut(s) 2557, 2762, 3646
Bsp19I CCATGG 2 cut(s) 429, 2541
BspANI GGCC 3 cut(s) 1443, 1489, 3364
BspEI TCCGGA 1 cut(s) 640
BspFNI CGCG 2 cut(s) 156, 1333
BspLI GGNNCC 4 cut(s) 133, 1234, 1977, 3801
BspMI ACCTGC 1 cut(s) 941
BspOI GCTAGC 2 cut(s) 2013, 2076
BspPI GGATC 7 cut(s) 1752, 2272, 2511, 2906, 3794, 3807, 4074
BspQI GCTCTTC 1 cut(s) 1335
BspT107I GGYRCC 2 cut(s) 131, 1975
BspTI CTTAAG 4 cut(s) 1187, 2321, 3326, 3689
BsrBI CCGCTC 1 cut(s) 145
BsrDI GCAATG 2 cut(s) 1322, 2988
BsrGI TGTACA 3 cut(s) 2557, 2762, 3646
BssECI CCNNGG 9 cut(s) 292, 429, 1550, 1627, 2212, 2541, 3246, 3733, 3734
BssNI GRCGYC 2 cut(s) 201, 3965
BssT1I CCWWGG 4 cut(s) 429, 1550, 2541, 3246
Bst2UI CCWGG 3 cut(s) 1629, 3342, 3735
Bst6I CTCTTC 6 cut(s) 1335, 1713, 2228, 2595, 3246, 4136
BstACI GRCGYC 2 cut(s) 201, 3965
BstAFI CTTAAG 4 cut(s) 1187, 2321, 3326, 3689
BstAPI GCANNNNNTGC 1 cut(s) 1319
BstAUI TGTACA 3 cut(s) 2557, 2762, 3646
BstC8I GCNNGC 9 cut(s) 260, 273, 357, 585, 1045, 1311, 2011, 2074, 3351
BstDSI CCRYGG 4 cut(s) 292, 429, 2212, 2541
BstEII GGTNACC 1 cut(s) 71
BstFNI CGCG 2 cut(s) 156, 1333
BstHHI GCGC 3 cut(s) 156, 2140, 2901
BstMAI GTCTC 5 cut(s) 293, 1755, 2541, 2795, 3534
BstMWI GCNNNNNNNGC 6 cut(s) 41, 151, 268, 1145, 1319, 3788
BstNI CCWGG 3 cut(s) 1629, 3342, 3735
BstNSI RCATGY 5 cut(s) 1451, 2063, 2650, 3353, 3776
BstPAI GACNNNNGTC 1 cut(s) 2214
BstPI GGTNACC 1 cut(s) 71
BstSCI CCNGG 4 cut(s) 309, 1627, 3340, 3733
BstSFI CTRYAG 2 cut(s) 107, 2889
BstUI CGCG 2 cut(s) 156, 1333
BstV1I GCAGC 2 cut(s) 2032, 3775
BstV2I GAAGAC 3 cut(s) 560, 1853, 1947
BstX2I RGATCY 3 cut(s) 2680, 3184, 3799
BstYI RGATCY 3 cut(s) 2680, 3184, 3799
Bsu36I CCTNAGG 1 cut(s) 578
BsuI GTATCC 1 cut(s) 436
BsuRI GGCC 3 cut(s) 1443, 1489, 3364
BtgI CCRYGG 4 cut(s) 292, 429, 2212, 2541
BtrI CACGTC 2 cut(s) 1223, 4037
BtsI GCAGTG 2 cut(s) 82, 2133
BtsIMutI CAGTG 5 cut(s) 82, 195, 560, 2133, 3180
BveI ACCTGC 1 cut(s) 941
Cac8I GCNNGC 9 cut(s) 260, 273, 357, 585, 1045, 1311, 2011, 2074, 3351
CfoI GCGC 3 cut(s) 156, 2140, 2901
Cfr13I GGNCC 3 cut(s) 643, 2209, 3560
CspCI CAANNNNNGTGG 4 cut(s) 547, 582, 2478, 2513
DraI TTTAAA 2 cut(s) 912, 3903
DrdI GACNNNNNNGTC 1 cut(s) 816
DseDI GACNNNNNNGTC 1 cut(s) 816
EaeI YGGCCR 2 cut(s) 1487, 3362
Eam1104I CTCTTC 6 cut(s) 1335, 1713, 2228, 2595, 3246, 4136
EarI CTCTTC 6 cut(s) 1335, 1713, 2228, 2595, 3246, 4136
EciI GGCGGA 2 cut(s) 229, 401
Ecl136II GAGCTC 3 cut(s) 370, 854, 1894
Eco130I CCWWGG 4 cut(s) 429, 1550, 2541, 3246
Eco24I GRGCYC 3 cut(s) 372, 856, 1896
Eco47I GGWCC 3 cut(s) 643, 2209, 3560
Eco53kI GAGCTC 3 cut(s) 370, 854, 1894
Eco57I CTGAAG 5 cut(s) 1014, 1581, 2045, 2826, 3173
Eco81I CCTNAGG 1 cut(s) 578
Eco88I CYCGRG 1 cut(s) 98
Eco91I GGTNACC 1 cut(s) 71
EcoICRI GAGCTC 3 cut(s) 370, 854, 1894
EcoO65I GGTNACC 1 cut(s) 71
EcoRI GAATTC 2 cut(s) 504, 654
EcoRII CCWGG 3 cut(s) 1627, 3340, 3733
EcoT14I CCWWGG 4 cut(s) 429, 1550, 2541, 3246
EcoT22I ATGCAT 4 cut(s) 1324, 1401, 3351, 3714
EcoT38I GRGCYC 3 cut(s) 372, 856, 1896
ErhI CCWWGG 4 cut(s) 429, 1550, 2541, 3246
Esp3I CGTCTC 2 cut(s) 1755, 2541
FalI AAGNNNNNCTT 2 cut(s) 561, 593
FaqI GGGAC 2 cut(s) 2162, 3270
FauNDI CATATG 2 cut(s) 1465, 2667
FbaI TGATCA 1 cut(s) 1177
FblI GTMKAC 1 cut(s) 106
Fnu4HI GCNGC 6 cut(s) 135, 146, 2046, 3365, 3789, 3908
FriOI GRGCYC 3 cut(s) 372, 856, 1896
Fsp4HI GCNGC 6 cut(s) 135, 146, 2046, 3365, 3789, 3908
GlaI GCGC 3 cut(s) 155, 2139, 2900
GluI GCNGC 6 cut(s) 135, 146, 2046, 3365, 3789, 3908
GsuI CTGGAG 2 cut(s) 1604, 3246
HaeIII GGCC 3 cut(s) 1443, 1489, 3364
HapII CCGG 6 cut(s) 311, 641, 1992, 2583, 2639, 3803
HhaI GCGC 3 cut(s) 156, 2140, 2901
Hin1I GRCGYC 2 cut(s) 201, 3965
Hin6I GCGC 3 cut(s) 154, 2138, 2899
HinP1I GCGC 3 cut(s) 154, 2138, 2899
HincII GTYRAC 1 cut(s) 843
HindII GTYRAC 1 cut(s) 843
HindIII AAGCTT 6 cut(s) 924, 1184, 1655, 1820, 2491, 3686
HpaII CCGG 6 cut(s) 311, 641, 1992, 2583, 2639, 3803
HphI GGTGA 9 cut(s) 194, 226, 1622, 1666, 1899, 1981, 2639, 3998, 4265
Hpy166II GTNNAC 8 cut(s) 107, 121, 843, 1411, 2097, 2290, 3647, 4282
Hpy8I GTNNAC 8 cut(s) 107, 121, 843, 1411, 2097, 2290, 3647, 4282
Hpy99I CGWCG 4 cut(s) 3967, 4217, 4220, 4223
HpyCH4IV ACGT 5 cut(s) 201, 1222, 1764, 3965, 4036
HpyF10VI GCNNNNNNNGC 6 cut(s) 41, 151, 268, 1145, 1319, 3788
HpySE526I ACGT 5 cut(s) 201, 1222, 1764, 3965, 4036
Hsp92I GRCGYC 2 cut(s) 201, 3965
HspAI GCGC 3 cut(s) 154, 2138, 2899
Kpn2I TCCGGA 1 cut(s) 640
Ksp22I TGATCA 1 cut(s) 1177
LguI GCTCTTC 1 cut(s) 1335
LmnI GCTCC 8 cut(s) 282, 321, 352, 1232, 1306, 1719, 2187, 2273
Lsp1109I GCAGC 2 cut(s) 2032, 3775
MaeII ACGT 5 cut(s) 201, 1222, 1764, 3965, 4036
MbiI CCGCTC 1 cut(s) 145
MfeI CAATTG 2 cut(s) 1169, 1269
MflI RGATCY 3 cut(s) 2680, 3184, 3799
MhlI GDGCHC 7 cut(s) 318, 372, 724, 856, 1311, 1889, 1896
MlsI TGGCCA 1 cut(s) 1489
MluNI TGGCCA 1 cut(s) 1489
MlyI GAGTC 5 cut(s) 106, 112, 1849, 2912, 3082
MmeI TCCRAC 6 cut(s) 4, 330, 1756, 2108, 2832, 3639
Mox20I TGGCCA 1 cut(s) 1489
Mph1103I ATGCAT 4 cut(s) 1324, 1401, 3351, 3714
MroI TCCGGA 1 cut(s) 640
MroXI GAANNNNTTC 3 cut(s) 654, 1725, 2310
MscI TGGCCA 1 cut(s) 1489
MslI CAYNNNNRTG 4 cut(s) 1679, 2331, 3654, 3675
Msp20I TGGCCA 1 cut(s) 1489
MspCI CTTAAG 4 cut(s) 1187, 2321, 3326, 3689
MspI CCGG 6 cut(s) 311, 641, 1992, 2583, 2639, 3803
MspR9I CCNGG 4 cut(s) 311, 1629, 3342, 3735
MunI CAATTG 2 cut(s) 1169, 1269
Mva1269I GAATGC 3 cut(s) 2960, 3010, 3351
MvaI CCWGG 3 cut(s) 1629, 3342, 3735
MvnI CGCG 2 cut(s) 156, 1333
MwoI GCNNNNNNNGC 6 cut(s) 41, 151, 268, 1145, 1319, 3788
NciI CCSGG 1 cut(s) 311
NcoI CCATGG 2 cut(s) 429, 2541
NdeI CATATG 2 cut(s) 1465, 2667
NheI GCTAGC 2 cut(s) 2009, 2072
NlaIV GGNNCC 4 cut(s) 133, 1234, 1977, 3801
NmeAIII GCCGAG 2 cut(s) 61, 1124
NmuCI GTSAC 4 cut(s) 1033, 1610, 3658, 4202
NsiI ATGCAT 4 cut(s) 1324, 1401, 3351, 3714
NspI RCATGY 5 cut(s) 1451, 2063, 2650, 3353, 3776
OliI CACNNNNGTG 1 cut(s) 1679
PaeI GCATGC 1 cut(s) 3353
PaeR7I CTCGAG 1 cut(s) 98
PaqCI CACCTGC 1 cut(s) 941
PasI CCCWGGG 1 cut(s) 3734
PciI ACATGT 2 cut(s) 2059, 3772
PciSI GCTCTTC 1 cut(s) 1335
PcsI WCGNNNNNNNCGW 1 cut(s) 4218
PctI GAATGC 3 cut(s) 2960, 3010, 3351
PdmI GAANNNNTTC 3 cut(s) 654, 1725, 2310
PfeI GAWTC 9 cut(s) 461, 1352, 1370, 1986, 2551, 2591, 2700, 3122, 4265
PflMI CCANNNNNTGG 1 cut(s) 1582
PfoI TCCNGGA 1 cut(s) 3340
PkrI GCNGC 6 cut(s) 136, 147, 2047, 3366, 3790, 3909
PleI GAGTC 5 cut(s) 106, 111, 1849, 2912, 3082
PpsI GAGTC 5 cut(s) 106, 111, 1849, 2912, 3082
PscI ACATGT 2 cut(s) 2059, 3772
PshAI GACNNNNGTC 1 cut(s) 2214
PshBI ATTAAT 1 cut(s) 2126
Psp124BI GAGCTC 3 cut(s) 372, 856, 1896
Psp6I CCWGG 3 cut(s) 1627, 3340, 3733
PspEI GGTNACC 1 cut(s) 71
PspGI CCWGG 3 cut(s) 1627, 3340, 3733
PspN4I GGNNCC 4 cut(s) 133, 1234, 1977, 3801
PspPI GGNCC 3 cut(s) 643, 2209, 3560
PsrI GAACNNNNNNTAC 2 cut(s) 42, 74
PsuI RGATCY 3 cut(s) 2680, 3184, 3799
RseI CAYNNNNRTG 4 cut(s) 1679, 2331, 3654, 3675
SacI GAGCTC 3 cut(s) 372, 856, 1896
SapI GCTCTTC 1 cut(s) 1335
SatI GCNGC 6 cut(s) 135, 146, 2046, 3365, 3789, 3908
Sau96I GGNCC 3 cut(s) 643, 2209, 3560
ScaI AGTACT 2 cut(s) 1066, 3611
SchI GAGTC 5 cut(s) 106, 112, 1849, 2912, 3082
ScrFI CCNGG 4 cut(s) 311, 1629, 3342, 3735
SduI GDGCHC 7 cut(s) 318, 372, 724, 856, 1311, 1889, 1896
SfcI CTRYAG 2 cut(s) 107, 2889
Sfr274I CTCGAG 1 cut(s) 98
SinI GGWCC 3 cut(s) 643, 2209, 3560
SlaI CTCGAG 1 cut(s) 98
SmiMI CAYNNNNRTG 4 cut(s) 1679, 2331, 3654, 3675
SphI GCATGC 1 cut(s) 3353
SspI AATATT 3 cut(s) 2124, 3301, 3872
SstI GAGCTC 3 cut(s) 372, 856, 1896
StyD4I CCNGG 4 cut(s) 309, 1627, 3340, 3733
StyI CCWWGG 4 cut(s) 429, 1550, 2541, 3246
TaiI ACGT 5 cut(s) 204, 1225, 1767, 3968, 4039
TatI WGTACW 7 cut(s) 1064, 2253, 2510, 2557, 2762, 3609, 3646
TauI GCSGC 4 cut(s) 137, 148, 3367, 3910
TfiI GAWTC 9 cut(s) 461, 1352, 1370, 1986, 2551, 2591, 2700, 3122, 4265
TscAI CASTG 5 cut(s) 89, 202, 567, 2140, 3180
TseFI GTSAC 4 cut(s) 1033, 1610, 3658, 4202
TseI GCWGC 2 cut(s) 2045, 3788
Tsp45I GTSAC 4 cut(s) 1033, 1610, 3658, 4202
TspGWI ACGGA 3 cut(s) 281, 308, 1983
TspRI CASTG 5 cut(s) 89, 202, 567, 2140, 3180
Van91I CCANNNNNTGG 1 cut(s) 1582
Vha464I CTTAAG 4 cut(s) 1187, 2321, 3326, 3689
VpaK11BI GGWCC 3 cut(s) 643, 2209, 3560
VspI ATTAAT 1 cut(s) 2126
XapI RAATTY 8 cut(s) 504, 654, 1797, 3305, 3423, 3727, 3829, 4073
XbaI TCTAGA 4 cut(s) 1936, 2218, 2696, 3118
XceI RCATGY 5 cut(s) 1451, 2063, 2650, 3353, 3776
XcmI CCANNNNNNNNNTGG 1 cut(s) 2192
XhoI CTCGAG 1 cut(s) 98
XmaJI CCTAGG 1 cut(s) 1550
XmiI GTMKAC 1 cut(s) 106
XmnI GAANNNNTTC 3 cut(s) 654, 1725, 2310
ZraI GACGTC 2 cut(s) 202, 3966
ZrmI AGTACT 2 cut(s) 1066, 3611
Zsp2I ATGCAT 4 cut(s) 1324, 1401, 3351, 3714
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.