Rmu_sc0007032.1_g000011

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007032.1
OG0000042
Physical Location & Seq
Reverse (-)
59325 .. 67388
8064 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007032.1_g000011.1.cds

Sequence Viewer

Length: 5535 bp
atggagtttctttcaaagattgtggagtacccaattgaacttgttggacgtctactgggacgccaagtgggttatgtaattgactgcagaaccaacattcaaaagctacaggatcaagtgaaagaattgaaagctgccagagagacgataaaggaagaggttgctgaagctaaaacaaaaggtgaaaaaatacgacctgatgttgagttgtggctgacaacagtggacaagatcactgcaaagacagacgaattgttgaatgatgaaagccaagcaaagctgaaatgtctccatggctgttgtcctaatctgactgtccgtcatcagataagcaggaaatcaacaaaattgcttgaggaggttattgaacagtatggaaaaaaagaatttccccaagtttcatgtggtatccttcggaaggaggtattgtctgtaacgacaggagattacctggcttttccatcaaggatgtcaattgtgaaggaaatcatggatagtctgaaagactctgatattaagaggatgggggtgtgtggaattggaggagtgggcaaaaccacattggtcaaagaagtttacaagctagcttcagaggataaagagtcatttgatagtgtggttatcctacttgacttgaagaaggatccaaacccggaagctattcaaaagataattgttgagaagctgggcatggacattcgtccaggtgaaactaaagaaggaagagcgagtcgcctttgtgccaggatacatggcaaaaagattcttgtgattctagatgatgttcaagaaaaaattgaactggagaacatgggacttccccgtctgccaacttgtaaaattttgttgacgtgcagaagtcgagatgttttatcttttgataagatgcgtgcagataaagtgcttgagcttgaccttttaggtaaaaaggaaacttggagtttgtttaagaagatggctggcgagattgttgatcacaaaggtcatatacaagatgtagcagtccaagtagccgaaaaatgtggaggtttgcccttattaattgtcacagttgcaagtgctttgaaagagaaaaagaatgcatctgcatggagaaatgccttaagacagctagaagcctgtgagaaagaagatttgaccgaacaagcttacctggcgctggagtggagttattaccaactggataatacagagcttcagccgttgctcttgctttgcggaattcaagtaaggcataaccgtgtttatgtggtagacttgttaaaatatggtatgggtttaggtttatttacaaacatcaatacagtggaagaagcacgggataaattggaaacactgattgataaacttaaagatttttacttgttgttggacggtgaaccagatgacattgaagctgaggacagtgtcagaatgcatgatcttgtgtgtcatgttgtgaaccggattgcacgcagagatcaacatgtgttattagttgaatatggaggtgacttgaaagaatggccagataaagatatcttaagaaagtgcaccaagttctctcttagactccacaatattcactcacttcctgaactaccttgggagtgcccagaagttgaattgtttcttttgcagggtgaaaatgatgagtcgttggaaatcccatccaacttttttaaagagatggagaagctcaaagtgctggatttaaccaatatgtgtttgccattattgcctgcatctatgcaatacttgaagaagcttcaaacgttgtgtttagataaatgcattatgggagatataactctacttgggcagctaagttgtttggaaattcttagcttttatggatccgttcttaaagaattgcctaaagaaataggacaattgactcgtcttcgggtgttggatgtatctgattgctctgaacttgaagtgatttcccctggtgtcatatcaagcttggtgagattggaaaatttgagaatgagaaacagctttaacaactgggagatcgaaggtggagaaagtaatgcaagcctttctgagctaaaacatttgtctcagctttcggcattagaaatagatattccgaatgcggacgttcttccaacaaacttgttctcccacaagttggaaagatttcatattactattggagatgcgtggtttcggaggagtacaatgaccctcaacacattgcgactcaagcttactaaaaaattagatgaaagtctaaaattgctgataaagagatctgaagagttgtccttggatgagacggaggttggtactgtccatgaattggataccgaagattttgagaatgtgaaacatctccaactccaaaacaatattgattttacggatcttgttaataggaaggttgtattccccaacttaacaaccttgagggtgcatggatgtaataaattaagatttttgttttcaatttctatggctagaagtcttgtacaactcacgcatctacaaatatccgaatgtcaactcctgcaagagattgtatcatcaacaagagaaagcggtgaagcaaaggtggataacatgttttctgaacttaaagaattgaagcttagaggacttccaaagctcattcgattcagtactggaaattatattggcttttctgccttggaagaactggagataaaattttgttatgaacttgtggaattcatcagtgataaagttgctatgagcagtaaagatactagattgatctgtaattataaagaaagtgaacagacgatctcggaagaggaagagaacctggatgttaagagtgagactagtgcacaaaacttcctctttaacgaaaaggtaggatttcctcggttggagaagctgaccatcagtgaggtatgggaattgaaggtgatatggcacgcccaacttgctcaagactcttttcggagactcagggaagttattgttaacaaatgcaagaatctaataagtttgtttccggctagtgtcatgggaagattgaatgctttggaaactttagaaataaaggagtgcgaatcactggaagtggtatttgaattactcagaagtagtgtcaaagaaatacatgtcgacacatcatcccttcatgatcagttaaagttattttgctgtcaaaatcttggttcagtaagcattagaggatgtaacagtttgaaaagtatcttcccagcctcagtggccagaggtcttcaacagctcacaacgttgagtgtgagctgttgtgacggtattgaggaaattgttggcgaggaagatgaagaagaagttctagaaacaacaccttatcatcgtttcgtattcccagatgtaacattggtggaattgctttatctgcctcagctcacgagtttctatcccaagttacatgtttcacagtggccatcactcaaacaattgagggtggtgggatgtgataaagtggggtttttagccacagaaatttctcactttgggaatgaacatgagctaggagtcatggatcctctaatgacgtctcaaaagcctttgtttctagccgacaaggttgtattccccaacttaacaaccttgagggtgcatggatgtgataaattaagatttttgttttcaatttctatggctagaagtcttgtacaactcacgcacctgcatatatccgcatgtcaactcctgcaagagattgtatcatcaacaagagaaagctgtgaagcaaatatggataacatgttttctgaacttaaagtattggagcttgaaagacttccaaagctcattcgattcagtattggaaattatattggcttttcagccttggaagaactggagatagtggcttgttatgaacttgtggaattcatcagtgataaagttgctatgagtagtaaagatactagattgatctgtaattataaagaaattgaacagacgatctcggaagaggaagagaaccttgatgttaagagtgagactagtgtacacaacttcctctttgacgaaaaggtaggatttcctcggttggagaaattgatcatcagtgagttaagggaattgaaggtgatatggcacgtccaacttgctcaagactcttttcggagactcagggaagttatcgttaacaaatgcaagaatctaacaagtttgtttccgcctagtgtcctgggaagattgaatgctttggaaactttagatataaaggagtgcgaatcactagaagtggtatttgaattattcagaagtagtgtcaaagaaatacatgtcgacacatcatcccctcatgaacggttaaagtcctttcgctgtcaaaatcttggttcagtaactattgaagaatgtaacagtttgaaaagtatcttcccagcctcagtggctggaggtcttcaacagctaacaacgttgagcgtgagccgttgtgacggtattgaggaaattgttagggaggaagatgaaggagttctagaaacaacaccttatcatctgtttgtgttcccaaacgtaagatggttggagtttgatagtctccctcagctaacgagtttctatcccaagatacatgcttcacagtggccatcactcacagaattggaggtgatcaagggatgtgataaagtggggttttttgccactgaaatttctcactttgggaatgaacatgagatagaagtcatggaacctccaatgacgtctcaaaaatctttgtttctagtcgacaaggattcgttccccaacttggaagacttaatattgaccaacatggaaatttggaatggaccacccccggcagatcagttgccttttggcaaattaaaatcaattaccttcatagggaattgtgcacctttctccaagcaagcttcggtccttttcctccggagattacaaaatcttgaacaaattcaagtgtgctataatgattcttgcgaagaaatatttgtcaatcaaagaattagtagtagcagcgaggccctccggcatgtgaggatgttgaggctccaccacttggacaaactaatgcatctagggaatggcaactctcaatcactgctttttccaaatttggaaactcttcgggtgtcgaattgtgcaagactacagagtctagagtcatccgcaatatcattccggaatctaacaactttggaagtatttgcctgtaatggattggaatatttaacaagttattcggtggccaaaagcttagggaagctcaagacatttgaagtgaccgactgtgaaagtgttgtagtaatattggcaagcaatgtgggagatgatgatgctgatgatacagcaggaaatgaggttttcagccacttgcaacatttggagcttagtggtctgccaagcctacaaggcttttgctctggacattctagagtcaaattcccaccctccatggccttacaagtatattcctgcccgatcaaattgaagatttcccctaatggggtcctcctaacagaaaaggaagatcaagatcaagatgaacaaaaagaagatgttgaaatggtaagtcactatccgataaatatctcatctttataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

1844

Amino Acids

209.42

Weight (kDa)

5.29

Isoelectric Point (pI)

46.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 2736, 3903, 5533
AarI CACCTGC 1 cut(s) 3648
AasI GACNNNNNNGTC 2 cut(s) 822, 5085
AatII GACGTC 3 cut(s) 52, 3509, 4676
Acc36I ACCTGC 1 cut(s) 3648
AccB7I CCANNNNNTGG 3 cut(s) 2119, 2290, 4990
AccI GTMKAC 5 cut(s) 52, 1254, 3084, 4251, 4698
AccIII TCCGGA 2 cut(s) 4860, 5112
AciI CCGC 6 cut(s) 1218, 2084, 2529, 3651, 4139, 5100
AclI AACGTT 3 cut(s) 1754, 3218, 4385
AclWI GGATC 8 cut(s) 120, 638, 651, 1830, 1843, 2361, 3488, 3501
AcoI YGGCCR 5 cut(s) 1505, 3192, 3392, 4556, 5178
AcuI CTGAAG 4 cut(s) 186, 573, 1181, 2265
AcyI GRCGYC 4 cut(s) 49, 61, 3506, 4673
AfaI GTAC 7 cut(s) 29, 2167, 2278, 2460, 2611, 3627, 3969
AfiI CCNNNNNNNGG 9 cut(s) 418, 1159, 2119, 2290, 4720, 4815, 4990, 5436, 5437
AflII CTTAAG 2 cut(s) 1102, 1522
AflIII ACRYGT 6 cut(s) 1465, 2550, 3079, 3379, 3717, 4246
AhdI GACNNNNNGTC 1 cut(s) 318
AhlI ACTAGT 2 cut(s) 2795, 3962
AjiI CACGTC 2 cut(s) 852, 4060
AjnI CCWGG 7 cut(s) 450, 703, 743, 1152, 1930, 2775, 4149
Alw21I GWGCWC 3 cut(s) 1535, 2803, 4828
Alw44I GTGCAC 3 cut(s) 1531, 2799, 4824
AlwI GGATC 8 cut(s) 120, 638, 651, 1830, 1843, 2361, 3488, 3501
AlwNI CAGNNNCTG 1 cut(s) 4361
Aor13HI TCCGGA 2 cut(s) 4860, 5112
AoxI GGCC 7 cut(s) 1505, 3192, 3392, 4556, 4953, 5178, 5388
ApaLI GTGCAC 3 cut(s) 1531, 2799, 4824
ApeKI GCWGC 3 cut(s) 134, 1801, 4947
AseI ATTAAT 1 cut(s) 1040
Asp700I GAANNNNTTC 8 cut(s) 660, 1608, 2127, 3279, 3753, 4443, 4884, 5055
AspLEI GCGC 1 cut(s) 1159
AspS9I GGNCC 4 cut(s) 4760, 4849, 4954, 5440
AsuC2I CCSGG 2 cut(s) 653, 4769
AsuNHI GCTAGC 1 cut(s) 583
AvaII GGWCC 3 cut(s) 4760, 4849, 5440
BaeGI GKGCMC 4 cut(s) 1535, 1595, 2803, 4828
BalI TGGCCA 5 cut(s) 1507, 3194, 3394, 4558, 5180
BamHI GGATCC 3 cut(s) 643, 1835, 3493
BauI CACGAG 1 cut(s) 3358
BbsI GAAGAC 4 cut(s) 1874, 3194, 4361, 4731
Bbv12I GWGCWC 3 cut(s) 1535, 2803, 4828
BbvCI CCTCAGC 3 cut(s) 1398, 3351, 4515
BbvI GCAGC 3 cut(s) 121, 1813, 4959
BccI CCATC 9 cut(s) 469, 517, 949, 1657, 1663, 2864, 3403, 4485, 4567
BceAI ACGGC 2 cut(s) 1186, 4383
BciT130I CCWGG 7 cut(s) 452, 705, 745, 1154, 1932, 2777, 4151
BciVI GTATCC 3 cut(s) 419, 741, 2287
BclI TGATCA 4 cut(s) 973, 3103, 4020, 4581
BcnI CCSGG 2 cut(s) 653, 4769
BcuI ACTAGT 2 cut(s) 2795, 3962
BfmI CTRYAG 3 cut(s) 85, 107, 5081
BfoI RGCGCY 1 cut(s) 1160
BfrI CTTAAG 2 cut(s) 1102, 1522
BfuAI ACCTGC 1 cut(s) 3648
BfuI GTATCC 3 cut(s) 419, 741, 2287
BglI GCCNNNNNGGC 3 cut(s) 3191, 4358, 5343
BglII AGATCT 1 cut(s) 2240
BisI GCNGC 3 cut(s) 135, 1802, 4948
BlsI GCNGC 3 cut(s) 136, 1803, 4949
BmcAI AGTACT 1 cut(s) 2611
Bme1390I CCNGG 9 cut(s) 452, 653, 705, 745, 1154, 1932, 2777, 4151, 4769
Bme18I GGWCC 3 cut(s) 4760, 4849, 5440
BmeRI GACNNNNNGTC 1 cut(s) 318
BmgBI CACGTC 2 cut(s) 852, 4060
BmgT120I GGNCC 4 cut(s) 4760, 4849, 4954, 5440
BmiI GGNNCC 6 cut(s) 645, 1837, 3495, 4662, 4982, 5441
BmrFI CCNGG 9 cut(s) 452, 653, 705, 745, 1154, 1932, 2777, 4151, 4769
BmrI ACTGGG 2 cut(s) 65, 2002
BmsI GCATC 7 cut(s) 876, 1091, 1733, 2137, 2479, 5014, 5257
BmtI GCTAGC 1 cut(s) 587
BmuI ACTGGG 2 cut(s) 65, 2002
BoxI GACNNNNGTC 1 cut(s) 699
BpiI GAAGAC 4 cut(s) 1874, 3194, 4361, 4731
BpmI CTGGAG 5 cut(s) 824, 1181, 2669, 3836, 4383
Bpu10I CCTNAGC 4 cut(s) 1398, 3351, 4515, 5188
BpuEI CTTGAG 8 cut(s) 374, 926, 2177, 2416, 2889, 3583, 4056, 5183
BpuMI CCSGG 2 cut(s) 653, 4769
BsaBI GATNNNNATC 2 cut(s) 5466, 5519
BsaHI GRCGYC 4 cut(s) 49, 61, 3506, 4673
BsaWI WCCGGW 3 cut(s) 1443, 4860, 5112
BsaXI ACNNNNNCTCC 4 cut(s) 413, 443, 2093, 2123
Bsc4I CCNNNNNNNGG 9 cut(s) 418, 1159, 2119, 2290, 4720, 4815, 4990, 5436, 5437
Bse1I ACTGG 8 cut(s) 60, 807, 1185, 1997, 2617, 2652, 3039, 3819
Bse3DI GCAATG 2 cut(s) 2183, 5257
Bse8I GATNNNNATC 2 cut(s) 5466, 5519
BseAI TCCGGA 2 cut(s) 4860, 5112
BseBI CCWGG 7 cut(s) 452, 705, 745, 1154, 1932, 2777, 4151
BseJI GATNNNNATC 2 cut(s) 5466, 5519
BseLI CCNNNNNNNGG 9 cut(s) 418, 1159, 2119, 2290, 4720, 4815, 4990, 5436, 5437
BseMI GCAATG 2 cut(s) 2183, 5257
BseNI ACTGG 8 cut(s) 60, 807, 1185, 1997, 2617, 2652, 3039, 3819
BseRI GAGGAG 3 cut(s) 371, 558, 2176
BseSI GKGCMC 4 cut(s) 1535, 1595, 2803, 4828
BseXI GCAGC 3 cut(s) 121, 1813, 4959
BseYI CCCAGC 3 cut(s) 685, 3181, 4348
BsgI GTGCAG 2 cut(s) 874, 912
BshFI GGCC 7 cut(s) 1507, 3194, 3394, 4558, 4955, 5180, 5390
BsiHKAI GWGCWC 3 cut(s) 1535, 2803, 4828
BsiSI CCGG 7 cut(s) 653, 1444, 2972, 4769, 4861, 4960, 5113
BslFI GGGAC 2 cut(s) 72, 828
BslI CCNNNNNNNGG 9 cut(s) 418, 1159, 2119, 2290, 4720, 4815, 4990, 5436, 5437
BsmBI CGTCTC 4 cut(s) 137, 2258, 3513, 4680
BsmFI GGGAC 2 cut(s) 72, 828
BsmI GAATGC 5 cut(s) 1084, 1419, 2086, 3001, 4168
BsnI GGCC 7 cut(s) 1507, 3194, 3394, 4558, 4955, 5180, 5390
Bsp1286I GDGCHC 4 cut(s) 1535, 1595, 2803, 4828
Bsp13I TCCGGA 2 cut(s) 4860, 5112
Bsp1407I TGTACA 3 cut(s) 2458, 3625, 3967
Bsp19I CCATGG 2 cut(s) 292, 5385
BspACI CCGC 6 cut(s) 1218, 2084, 2529, 3651, 4139, 5100
BspANI GGCC 7 cut(s) 1507, 3194, 3394, 4558, 4955, 5180, 5390
BspEI TCCGGA 2 cut(s) 4860, 5112
BspHI TCATGA 2 cut(s) 3100, 4267
BspLI GGNNCC 6 cut(s) 645, 1837, 3495, 4662, 4982, 5441
BspMAI CTGCAG 1 cut(s) 89
BspMI ACCTGC 1 cut(s) 3648
BspOI GCTAGC 1 cut(s) 587
BspPI GGATC 8 cut(s) 120, 638, 651, 1830, 1843, 2361, 3488, 3501
BspQI GCTCTTC 1 cut(s) 718
BspTI CTTAAG 2 cut(s) 1102, 1522
BsrDI GCAATG 2 cut(s) 2183, 5257
BsrGI TGTACA 3 cut(s) 2458, 3625, 3967
BsrI ACTGG 8 cut(s) 60, 807, 1185, 1997, 2617, 2652, 3039, 3819
BssNI GRCGYC 4 cut(s) 49, 61, 3506, 4673
BssSI CACGAG 1 cut(s) 3358
BssT1I CCWWGG 6 cut(s) 292, 1583, 2256, 2637, 3804, 5385
Bst2BI CACGAG 1 cut(s) 3358
Bst2UI CCWGG 7 cut(s) 452, 705, 745, 1154, 1932, 2777, 4151
Bst6I CTCTTC 8 cut(s) 150, 718, 2241, 2757, 2763, 3924, 3930, 5061
BstACI GRCGYC 4 cut(s) 49, 61, 3506, 4673
BstAFI CTTAAG 2 cut(s) 1102, 1522
BstAUI TGTACA 3 cut(s) 2458, 3625, 3967
BstC8I GCNNGC 9 cut(s) 585, 891, 961, 1453, 1722, 2023, 2892, 4842, 5248
BstDSI CCRYGG 2 cut(s) 292, 5385
BstENI CCTNNNNNAGG 1 cut(s) 416
BstH2I RGCGCY 1 cut(s) 1160
BstHHI GCGC 1 cut(s) 1159
BstMWI GCNNNNNNNGC 9 cut(s) 1154, 1684, 1717, 2194, 2900, 3191, 3346, 4358, 5343
BstNI CCWGG 7 cut(s) 452, 705, 745, 1154, 1932, 2777, 4151
BstNSI RCATGY 9 cut(s) 1469, 2554, 3083, 3383, 3657, 3721, 4250, 4547, 4967
BstPAI GACNNNNGTC 1 cut(s) 699
BstSCI CCNGG 9 cut(s) 450, 651, 703, 743, 1152, 1930, 2775, 4149, 4767
BstSFI CTRYAG 3 cut(s) 85, 107, 5081
BstSLI GKGCMC 4 cut(s) 1535, 1595, 2803, 4828
BstV1I GCAGC 3 cut(s) 121, 1813, 4959
BstV2I GAAGAC 4 cut(s) 1874, 3194, 4361, 4731
BstX2I RGATCY 5 cut(s) 643, 1835, 2240, 2353, 3493
BstYI RGATCY 5 cut(s) 643, 1835, 2240, 2353, 3493
BsuI GTATCC 3 cut(s) 419, 741, 2287
BsuRI GGCC 7 cut(s) 1507, 3194, 3394, 4558, 4955, 5180, 5390
BtgI CCRYGG 2 cut(s) 292, 5385
BtrI CACGTC 2 cut(s) 852, 4060
BtsI GCAGTG 2 cut(s) 234, 5030
BveI ACCTGC 1 cut(s) 3648
Cac8I GCNNGC 9 cut(s) 585, 891, 961, 1453, 1722, 2023, 2892, 4842, 5248
CaiI CAGNNNCTG 1 cut(s) 4361
CciI TCATGA 2 cut(s) 3100, 4267
CfoI GCGC 1 cut(s) 1159
Cfr13I GGNCC 4 cut(s) 4760, 4849, 4954, 5440
CseI GACGC 1 cut(s) 69
Csp6I GTAC 7 cut(s) 28, 2166, 2277, 2459, 2610, 3626, 3968
CspCI CAANNNNNGTGG 3 cut(s) 38, 5235, 5270
CviQI GTAC 7 cut(s) 28, 2166, 2277, 2459, 2610, 3626, 3968
DraI TTTAAA 1 cut(s) 1663
DrdI GACNNNNNNGTC 2 cut(s) 822, 5085
DriI GACNNNNNGTC 1 cut(s) 318
DseDI GACNNNNNNGTC 2 cut(s) 822, 5085
EaeI YGGCCR 5 cut(s) 1505, 3192, 3392, 4556, 5178
Eam1104I CTCTTC 8 cut(s) 150, 718, 2241, 2757, 2763, 3924, 3930, 5061
Eam1105I GACNNNNNGTC 1 cut(s) 318
EarI CTCTTC 8 cut(s) 150, 718, 2241, 2757, 2763, 3924, 3930, 5061
EciI GGCGGA 1 cut(s) 4128
Eco130I CCWWGG 6 cut(s) 292, 1583, 2256, 2637, 3804, 5385
Eco32I GATATC 1 cut(s) 1519
Eco47I GGWCC 3 cut(s) 4760, 4849, 5440
Eco57I CTGAAG 4 cut(s) 186, 573, 1181, 2265
EcoNI CCTNNNNNAGG 1 cut(s) 416
EcoO109I RGGNCCY 2 cut(s) 4954, 5440
EcoRI GAATTC 3 cut(s) 1221, 2678, 3845
EcoRII CCWGG 7 cut(s) 450, 703, 743, 1152, 1930, 2775, 4149
EcoRV GATATC 1 cut(s) 1519
EcoT14I CCWWGG 6 cut(s) 292, 1583, 2256, 2637, 3804, 5385
EcoT22I ATGCAT 4 cut(s) 1084, 1419, 1775, 5007
ErhI CCWWGG 6 cut(s) 292, 1583, 2256, 2637, 3804, 5385
Esp3I CGTCTC 4 cut(s) 137, 2258, 3513, 4680
FalI AAGNNNNNCTT 2 cut(s) 3927, 3959
FaqI GGGAC 2 cut(s) 72, 828
FbaI TGATCA 4 cut(s) 973, 3103, 4020, 4581
FblI GTMKAC 5 cut(s) 52, 1254, 3084, 4251, 4698
Fnu4HI GCNGC 3 cut(s) 135, 1802, 4948
Fsp4HI GCNGC 3 cut(s) 135, 1802, 4948
GlaI GCGC 1 cut(s) 1158
GluI GCNGC 3 cut(s) 135, 1802, 4948
GsaI CCCAGC 3 cut(s) 689, 3185, 4352
GsuI CTGGAG 5 cut(s) 824, 1181, 2669, 3836, 4383
HaeII RGCGCY 1 cut(s) 1160
HaeIII GGCC 7 cut(s) 1507, 3194, 3394, 4558, 4955, 5180, 5390
HapII CCGG 7 cut(s) 653, 1444, 2972, 4769, 4861, 4960, 5113
HgaI GACGC 1 cut(s) 69
HhaI GCGC 1 cut(s) 1159
Hin1I GRCGYC 4 cut(s) 49, 61, 3506, 4673
Hin6I GCGC 1 cut(s) 1157
HinP1I GCGC 1 cut(s) 1157
HincII GTYRAC 8 cut(s) 849, 2492, 2941, 3085, 3659, 4108, 4252, 4699
HindII GTYRAC 8 cut(s) 849, 2492, 2941, 3085, 3659, 4108, 4252, 4699
HindIII AAGCTT 7 cut(s) 1146, 1745, 1945, 2195, 2576, 4842, 5185
HpaI GTTAAC 2 cut(s) 2941, 4108
HpaII CCGG 7 cut(s) 653, 1444, 2972, 4769, 4861, 4960, 5113
HpyF10VI GCNNNNNNNGC 9 cut(s) 1154, 1684, 1717, 2194, 2900, 3191, 3346, 4358, 5343
Hsp92I GRCGYC 4 cut(s) 49, 61, 3506, 4673
HspAI GCGC 1 cut(s) 1157
Kpn2I TCCGGA 2 cut(s) 4860, 5112
Ksp22I TGATCA 4 cut(s) 973, 3103, 4020, 4581
KspAI GTTAAC 2 cut(s) 2941, 4108
LguI GCTCTTC 1 cut(s) 718
LmnI GCTCC 3 cut(s) 3742, 4986, 5317
Lsp1109I GCAGC 3 cut(s) 121, 1813, 4959
LweI GCATC 7 cut(s) 876, 1091, 1733, 2137, 2479, 5014, 5257
MfeI CAATTG 4 cut(s) 33, 474, 1871, 3407
MflI RGATCY 5 cut(s) 643, 1835, 2240, 2353, 3493
MhlI GDGCHC 4 cut(s) 1535, 1595, 2803, 4828
MlsI TGGCCA 5 cut(s) 1507, 3194, 3394, 4558, 5180
MluNI TGGCCA 5 cut(s) 1507, 3194, 3394, 4558, 5180
Mox20I TGGCCA 5 cut(s) 1507, 3194, 3394, 4558, 5180
Mph1103I ATGCAT 4 cut(s) 1084, 1419, 1775, 5007
MroI TCCGGA 2 cut(s) 4860, 5112
MroXI GAANNNNTTC 8 cut(s) 660, 1608, 2127, 3279, 3753, 4443, 4884, 5055
MscI TGGCCA 5 cut(s) 1507, 3194, 3394, 4558, 5180
MslI CAYNNNNRTG 3 cut(s) 1087, 1239, 3576
Msp20I TGGCCA 5 cut(s) 1507, 3194, 3394, 4558, 5180
MspCI CTTAAG 2 cut(s) 1102, 1522
MspI CCGG 7 cut(s) 653, 1444, 2972, 4769, 4861, 4960, 5113
MspR9I CCNGG 9 cut(s) 452, 653, 705, 745, 1154, 1932, 2777, 4151, 4769
MunI CAATTG 4 cut(s) 33, 474, 1871, 3407
Mva1269I GAATGC 5 cut(s) 1084, 1419, 2086, 3001, 4168
MvaI CCWGG 7 cut(s) 452, 705, 745, 1154, 1932, 2777, 4151
MwoI GCNNNNNNNGC 9 cut(s) 1154, 1684, 1717, 2194, 2900, 3191, 3346, 4358, 5343
NciI CCSGG 2 cut(s) 653, 4769
NcoI CCATGG 2 cut(s) 292, 5385
NheI GCTAGC 1 cut(s) 583
NlaIV GGNNCC 6 cut(s) 645, 1837, 3495, 4662, 4982, 5441
NmuCI GTSAC 6 cut(s) 1045, 1490, 3236, 4403, 5212, 5504
NsiI ATGCAT 4 cut(s) 1084, 1419, 1775, 5007
NspI RCATGY 9 cut(s) 1469, 2554, 3083, 3383, 3657, 3721, 4250, 4547, 4967
PagI TCATGA 2 cut(s) 3100, 4267
PaqCI CACCTGC 1 cut(s) 3648
PciI ACATGT 6 cut(s) 1465, 2550, 3079, 3379, 3717, 4246
PciSI GCTCTTC 1 cut(s) 718
PctI GAATGC 5 cut(s) 1084, 1419, 2086, 3001, 4168
PdmI GAANNNNTTC 8 cut(s) 660, 1608, 2127, 3279, 3753, 4443, 4884, 5055
PflFI GACNNNGTC 1 cut(s) 1406
PflMI CCANNNNNTGG 3 cut(s) 2119, 2290, 4990
PkrI GCNGC 3 cut(s) 136, 1803, 4949
PpuMI RGGWCCY 1 cut(s) 5440
PscI ACATGT 6 cut(s) 1465, 2550, 3079, 3379, 3717, 4246
PshAI GACNNNNGTC 1 cut(s) 699
PshBI ATTAAT 1 cut(s) 1040
PsiI TTATAA 3 cut(s) 2736, 3903, 5533
Psp1406I AACGTT 3 cut(s) 1754, 3218, 4385
Psp5II RGGWCCY 1 cut(s) 5440
Psp6I CCWGG 7 cut(s) 450, 703, 743, 1152, 1930, 2775, 4149
PspFI CCCAGC 3 cut(s) 685, 3181, 4348
PspGI CCWGG 7 cut(s) 450, 703, 743, 1152, 1930, 2775, 4149
PspN4I GGNNCC 6 cut(s) 645, 1837, 3495, 4662, 4982, 5441
PspPI GGNCC 4 cut(s) 4760, 4849, 4954, 5440
PspPPI RGGWCCY 1 cut(s) 5440
PstI CTGCAG 1 cut(s) 89
PstNI CAGNNNCTG 1 cut(s) 4361
PsuI RGATCY 5 cut(s) 643, 1835, 2240, 2353, 3493
PsyI GACNNNGTC 1 cut(s) 1406
RsaI GTAC 7 cut(s) 29, 2167, 2278, 2460, 2611, 3627, 3969
RsaNI GTAC 7 cut(s) 28, 2166, 2277, 2459, 2610, 3626, 3968
RseI CAYNNNNRTG 3 cut(s) 1087, 1239, 3576
SalI GTCGAC 3 cut(s) 3083, 4250, 4697
SapI GCTCTTC 1 cut(s) 718
SatI GCNGC 3 cut(s) 135, 1802, 4948
Sau96I GGNCC 4 cut(s) 4760, 4849, 4954, 5440
ScaI AGTACT 1 cut(s) 2611
ScrFI CCNGG 9 cut(s) 452, 653, 705, 745, 1154, 1932, 2777, 4151, 4769
SduI GDGCHC 4 cut(s) 1535, 1595, 2803, 4828
SfaNI GCATC 7 cut(s) 876, 1091, 1733, 2137, 2479, 5014, 5257
SfcI CTRYAG 3 cut(s) 85, 107, 5081
SinI GGWCC 3 cut(s) 4760, 4849, 5440
SmiMI CAYNNNNRTG 3 cut(s) 1087, 1239, 3576
SpeI ACTAGT 2 cut(s) 2795, 3962
SsiI CCGC 6 cut(s) 1218, 2084, 2529, 3651, 4139, 5100
SspI AATATT 6 cut(s) 1561, 2341, 4734, 4920, 5159, 5241
StyD4I CCNGG 9 cut(s) 450, 651, 703, 743, 1152, 1930, 2775, 4149, 4767
StyI CCWWGG 6 cut(s) 292, 1583, 2256, 2637, 3804, 5385
TaqI TCGA 8 cut(s) 862, 2001, 2602, 3084, 3769, 4251, 4698, 5066
TaqII GACCGA 3 cut(s) 1154, 4837, 5231
TatI WGTACW 5 cut(s) 2165, 2458, 2609, 3625, 3967
TseFI GTSAC 6 cut(s) 1045, 1490, 3236, 4403, 5212, 5504
TseI GCWGC 3 cut(s) 134, 1801, 4947
Tsp45I GTSAC 6 cut(s) 1045, 1490, 3236, 4403, 5212, 5504
TspGWI ACGGA 4 cut(s) 308, 1828, 2282, 2366
Tth111I GACNNNGTC 1 cut(s) 1406
Van91I CCANNNNNTGG 3 cut(s) 2119, 2290, 4990
Vha464I CTTAAG 2 cut(s) 1102, 1522
VneI GTGCAC 3 cut(s) 1531, 2799, 4824
VpaK11BI GGWCC 3 cut(s) 4760, 4849, 5440
VspI ATTAAT 1 cut(s) 1040
XagI CCTNNNNNAGG 1 cut(s) 416
XbaI TCTAGA 5 cut(s) 775, 3283, 4447, 5089, 5363
XceI RCATGY 9 cut(s) 1469, 2554, 3083, 3383, 3657, 3721, 4250, 4547, 4967
XcmI CCANNNNNNNNNTGG 2 cut(s) 401, 4488
XmiI GTMKAC 5 cut(s) 52, 1254, 3084, 4251, 4698
XmnI GAANNNNTTC 8 cut(s) 660, 1608, 2127, 3279, 3753, 4443, 4884, 5055
ZraI GACGTC 3 cut(s) 50, 3507, 4674
ZrmI AGTACT 1 cut(s) 2611
Zsp2I ATGCAT 4 cut(s) 1084, 1419, 1775, 5007
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.