MD13G1197600.v1.1

disease resistance

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
Physical Location & Seq
Forward (+)
17313654 .. 17321010
7357 bp
Loading structure...
UTR
Exon/CDS
Intron
MD13G1197600.v1.1.491

Sequence Viewer

Length: 4431 bp
ATGGAGATACTCACTGCGATTATTCCTAAAATAATTGACTACACAATTAGACCAGTTGGACGCCAAGTGGGTTATATCATTTTCTACAAAAGCAACCTTGAAGATCTGAGGAGTACATTGAAGAATTTTGATGCTGTCAAAGTCAGGATGAAGCATGCAGTTGATGAAGCCGAAAGAAAAGTTAATAAAAAAGTGGAAGCTGATGTCCAGAACTGGCATACAGAAGCGGATGAGATCACTCGAGAGGCAGAAGCATTATTGAATGACGAAGGGCATGCAAAGACAAAGTGTCTCATTATATGTCCTAATCTGATATCCTATCATCAGCGTAGCAGGAAGTCGACAAAACTGATGAAAAAGATTAAACTCCATGAAAATAAAAAAGACTTTTCCAGTGTTTCTTACAATGCTCCCGTAGAAGACATATCTGCCATAGCATCCGATGAGTACATGGCCTTTGAATCAAGGATTTCAATGGTGAAGGATATCATTGCAGAACTGAAAAAACCTGATATCAACAGGATTGGGGTGTACGGATTAGGGGGTGTTGGGAAGACAACACTTGCCAAAGAGGTTTACAGAGAAGCTATGAAAGAGAAGTTATTTGATGACGTTGTTATAATACTAAATGTCAAAGAGAAAAAAGATGATGAACAAATTCAAAAAGAAATTGCTGAAAAGTTTGATATGGACGTTGATGAATCTCAGAAAATGGGAACAAGGGCGAATCTCCTACGGGCCAGGATAAAAGACAGGAAGAGTACTCTTATCATTTTAGATGATATTTTGGGAATAATTGACTTCGAGGCTGTGGGACTCGTCGGCGTGCCGACTTGTAATTTATTGTTGACCTCTAGAGATCAAACAGTTCTTTCTGAGATGCGCACGCAAACGTTTTTCCAACTTGGCCTTTTAAGTGAAGAAGAAACTTGGAGTTTGTTTGAGAAGATGGCAGGTGACGTGGTTAAAGACGACCGTATACGGAAAATAGCAACCCAACTAGCACGAAGATGTGGAGGTTTGCCGGTTTCAGTTGTTGCAGTTGCAAGGGCTTCAAGAGAAGATGGTCGTTTAGAGGTATGGAAAGATGCCTTGAGGCGCTTCAAAAGTTTTGACAAGGAAGGACCAGCAGAAATAGCAAAACTTGCTATAGAGTGGAGTTACAATCGGTTGAAGGGTGATGAGCTTAGGCCATTATTCTTGCTATGTGGAGTTATTGCTGGGGGGAGCTGCAGTATTTTTCTCAGTGACTTGTTCAAGTATAGTATGGGTTTGGGTTTGATTAAAAATTGTGATACAGTGGAAGATGCAAGGAATTCATTGCATGCACTGGCTGCAAAACTAAAAAATTCTTGCCTATTGCTGGACAGTTACGATGATGGGACTGTTAGAATGCACGAGCTTGTTCGAGATGCTGCTATCTGGATTGCATCTGATGAGCAAATGGCATTTTCAAAAGCATATGGAGATGAGGTGAAAGAATGGCCCATTGAGGATTTATTTAAAAAGTACACTACAATCTCGTTAAAATCTTGCAAAATCCCCAGACTTCCTGATGTATCTTGGGAATGCCCGGAATTAAAATTGTTGATCTTGGAGAATGATAATATTGGCGACTCCCAGGAAATCCCAAGCAAATATTTTGAAGGGATGAAAGAACTCAAAGTGTTGGATGTAACGAAATTCTGTATTCAGTCACTACCTCCATCTCTTCAATCCCTAAAGCATCTCCACACATTGTGTTTAGATCAGTGCGAGTTGGTAGACATAACTCTTGTTGGACAGCTAACAAACTTGAAAATTCTTAGCCTGATAGACTCCAAGGTTAAAGAGTTGCCCAAAGAAATAGGGAAATTGACTCGTTTACAATTATTGGATTTGACCGGTTGCTCTGAACTTATTCTGATCTCACCTGATGTTATATCAAGCTTGACAAGACTGGAAGACTTGAGGATGGGAATAAAAAGCTTCAAGCAGTGGGAGGGTAAAGGTTTGGTCGATGGCAGACGAAGTAATGCTAGCGTTTCAGAGCTGAAGCACTTGTCTCAACTAACTGCATTAGACATACATGTTCCAGATGCTAACATTCTTCCAACCAACTTGTTCTCCGATAAGTTAGAAAGATACACAATACTTATCGGTGATTGTTGGGAATATCCTGACATCTATGGAACCTCCTCTAACATGCTAAAACTGAAGCTCACCAGGAGAAATCAATTCGACAGAGGTATAAAGTTGCTGGTAAAGAGATGTGAGCAGTTGTACTTGGATGGGATGGAGAGTGTGAATATTATTTCCTATCTATTTGACAGTGAAGCTGTTAAACAAGTGAAGCATCTCCATGTCCAAAACAACGACGAAGTTACATATGTCATTAACTCCATCAGTTGGAGTTATTCTCCTAATGCCTTCCCCAACCTGGAATCATTATCTCTTCACGACCTTGTTAGTTTGGAAAGTGTATGTTATGGGCAACTTATAGGCGAGCCTTTCCAAAAGTTAAAATCTTTGACACTGCGGAATCTACCAAAACTTATTGGTTTCTCTTCCAAAGGCAAGCAATTAACGATTGATACAGAAACCAACGAAATCGTTTTGGAGGATGAAGTTGGTGGAGCCCCGAAACTGTTCAACATTGGTGAGGTTTTGATGCCCAACTTAACAACCTTGATTGTGCATCGATGTGATAGTTTAAGATTCTTGTTTTCGAGTTCCATGGCTAAATGTCTTGGACAACTCAAACATCTCACAATATCCAAATGCCAAATCATGGAAGAGATAGTAGGGAAAAATGAGGAAAATACAGATGGCATGTTTTGTAAGCTAAAACATCTTTGGCTACAACATCTTCCAAACCTCACTAAATTCAGCTCAGGAAGTTACATTGAATTTCCGTCATTGGAGTTGTTGGATCTAGACGATTGTCCTAAATTGGAGATATTCATCTTTGATGCTAAGAGCGAAAATATTACAATCAACAAAGACAGAAGAGAGATTGACTCGAAGGAGAATTTTGAACTCTTTGATGAAAAGGGAGGATTTCCTAGCTTGGACAAATTGATCATCCATGATCTACCTCAGTTGGAGACAATATTCCACAACCAACTTCATCCAGACTCTTTCCGCAGGCTTAGAAAAATAGATGTTTGTAGATGCCACAGTCTGATTAATATCTTTGGGCCAAGTATCATGGGAAGATTGAATGCTCTTGACACCTTAAAAATAAAGCAGTGCCAGTCACTTCAAGTGGTATATGACACATCATCTACCACTCAGTTGAATGGTTTTGAGTGCCCAAATCTAAATTCAGTTCACATACACTCATGTGACAGTTTGAAAAATATCTTTCCAACCTCAGTGGCCAAAGGTCTTAAGCAGCTGCTATGGTTGACAATTGAGAATTGTGGTTTGATGAAGGAAATTGTTGCGAAGGAAGAAGGATCAGAAAGGACGCATGAGTTCGGGTTCCCTAAAGTAGAAACTCTGGTTTTTCATAATATGCCCCAACTTCGGAATTTCTATCCAGGGCTGCATGTTTCTCATTGGCCATCACTCAACAAATTGGGCTTCGTTAAATGTGCTAGTGTGGAGATTTTTTCTTCTGAATTTTCAACATATCACGACAAACTTGAGTTGGGCCACCCAACACCAATGAAACAACCTTTCTTTTTAATTGAGAAGGGTAAGTCATTTCTCAACTTGGAATTCTTGAGGTTGGATAAGAATACGGAGATTTGGTATGAACATTATGGTCCACTCCCGGCAGAGATGTTGAGCAAACTTAAATCACTTTATTTTGCTACTTCACTTCCCAAGTCATATGTTATCCTTGAGAATTTACAGAATCTTGAAATGCTGCATGTGATCTCTGCTCCTTGGAAAGAATTATTTGTCCACGACCACCAAGGAAGTAGTAGCGGGGAAATACATGAGGTTGAGACCCTCCAACATGTAAAGGATTTGTGGCTTATCGATATGTCTGAGCTGATACATCTAGGAAAGGCAGGGGGGCCTGTTTTTCCAAACTTGGAAGTTCTATACCTGAACAAATGTGGCAGATTAGAGAATCTAGCTTCAGCTTTAATATCCTTTCGGAATCTAACCACTTTGGACATATGGGGTTGTCACAGACTGCAATACTTAATACCTTATTCTGTGGCCAAGAATTTGCAGCAACTCAAGAAGTTGAAAGTTAAGTCCTGTGAAGGAATGGTAGAAATAGTGGCAAACAACGGAGATGATTCAGAAAATGAGATTACTTTCAGTTGCTTGCAACATCTTGAACTTTCTGGTCTACCAAGTCTGCAAGGATTTTGCGCTGGAAATTGCATTGTCAAAGTCCCATCCTTGCACACTTTGTTTGTCGAGCACTGCCAGCTGATCGAGTTAGAGATTTCTCCTGATGGTTTACTAGTGATCCATGACCAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1477

Amino Acids

167.51

Weight (kDa)

5.96

Isoelectric Point (pI)

42.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 159 - 319 8.5e-26 NB-ARC domain
LRR_14 PF23598 511 - 821 7.2e-13 Leucine-rich repeat region
LRR_RPS2 PF23247 883 - 922 1.7e-08 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 924 - 1079 2.6e-18 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1081 - 1136 9.4e-11 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1363 - 1460 2.4e-12 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 620
AarI CACCTGC 1 cut(s) 944
Acc16I TGCGCA 1 cut(s) 884
Acc36I ACCTGC 1 cut(s) 944
AccB7I CCANNNNNTGG 2 cut(s) 2388, 2770
AccI GTMKAC 4 cut(s) 341, 979, 1764, 4294
AciI CCGC 4 cut(s) 227, 2518, 3124, 3918
AclI AACGTT 1 cut(s) 893
AclWI GGATC 3 cut(s) 2919, 3448, 4411
AcoI YGGCCR 3 cut(s) 3360, 3545, 4158
AcuI CTGAAG 3 cut(s) 2054, 2216, 4059
AcyI GRCGYC 1 cut(s) 61
AdeI CACNNNGTG 1 cut(s) 1740
AfaI GTAC 6 cut(s) 115, 449, 533, 763, 1511, 2264
AfiI CCNNNNNNNGG 5 cut(s) 1363, 2388, 2419, 2770, 3510
AflII CTTAAG 1 cut(s) 3371
AflIII ACRYGT 2 cut(s) 2068, 3949
AgeI ACCGGT 1 cut(s) 1883
AhdI GACNNNNNGTC 1 cut(s) 288
AhlI ACTAGT 1 cut(s) 4411
AjiI CACGTC 1 cut(s) 961
AjnI CCWGG 5 cut(s) 740, 1620, 2204, 2418, 3523
AjuI GAANNNNNNNTTGG 2 cut(s) 3289, 3321
AleI CACNNNNGTG 1 cut(s) 3324
Alw21I GWGCWC 1 cut(s) 4371
Alw26I GTCTC 4 cut(s) 296, 2049, 3080, 3932
AlwI GGATC 3 cut(s) 2919, 3448, 4411
Ama87I CYCGRG 1 cut(s) 240
ApeKI GCWGC 8 cut(s) 1230, 1334, 1415, 3376, 3379, 3529, 3856, 4171
AseI ATTAAT 1 cut(s) 3168
AsiGI ACCGGT 1 cut(s) 1883
Asp700I GAANNNNTTC 3 cut(s) 657, 1899, 2627
AspLEI GCGC 3 cut(s) 885, 1101, 4319
AspS9I GGNCC 7 cut(s) 738, 1124, 1485, 3179, 3637, 3752, 4010
AsuC2I CCSGG 2 cut(s) 1574, 3761
AsuHPI GGTGA 8 cut(s) 490, 968, 1190, 1486, 1902, 2153, 2194, 2651
AsuNHI GCTAGC 1 cut(s) 2018
AvaI CYCGRG 1 cut(s) 240
AvaII GGWCC 2 cut(s) 1124, 3752
BaeGI GKGCMC 1 cut(s) 3296
BalI TGGCCA 3 cut(s) 3362, 3547, 4160
BanII GRGCYC 1 cut(s) 2620
BauI CACGAG 1 cut(s) 1397
BbsI GAAGAC 3 cut(s) 426, 560, 1950
Bbv12I GWGCWC 1 cut(s) 4371
BbvI GCAGC 8 cut(s) 1217, 1321, 1402, 3366, 3388, 3516, 3843, 4183
BcgI CGANNNNNNTGC 2 cut(s) 257, 291
BciT130I CCWGG 5 cut(s) 742, 1622, 2206, 2420, 3525
BclI TGATCA 1 cut(s) 3060
BcnI CCSGG 2 cut(s) 1574, 3761
BcoDI GTCTC 4 cut(s) 296, 2049, 3080, 3932
BcuI ACTAGT 1 cut(s) 4411
BfaI CTAG 9 cut(s) 855, 1001, 2019, 2915, 3045, 3582, 3995, 4070, 4412
BfmI CTRYAG 2 cut(s) 1149, 1231
BfoI RGCGCY 1 cut(s) 1102
BfrI CTTAAG 1 cut(s) 3371
BfuAI ACCTGC 1 cut(s) 944
BglII AGATCT 1 cut(s) 103
BisI GCNGC 8 cut(s) 1231, 1335, 1416, 3377, 3380, 3530, 3857, 4172
BlsI GCNGC 8 cut(s) 1232, 1336, 1417, 3378, 3381, 3531, 3858, 4173
BmcAI AGTACT 1 cut(s) 763
Bme1390I CCNGG 7 cut(s) 742, 1574, 1622, 2206, 2420, 3525, 3761
Bme18I GGWCC 2 cut(s) 1124, 3752
BmeRI GACNNNNNGTC 1 cut(s) 288
BmeT110I CYCGRG 1 cut(s) 240
BmgBI CACGTC 1 cut(s) 961
BmgT120I GGNCC 7 cut(s) 738, 1124, 1485, 3179, 3637, 3752, 4010
BmiI GGNNCC 4 cut(s) 2173, 2617, 3467, 4011
BmrFI CCNGG 7 cut(s) 742, 1574, 1622, 2206, 2420, 3525, 3761
BmtI GCTAGC 1 cut(s) 2022
BoxI GACNNNNGTC 1 cut(s) 2922
BpiI GAAGAC 3 cut(s) 426, 560, 1950
BplI GAGNNNNNCTC 4 cut(s) 2383, 2415, 2984, 3016
Bpu10I CCTNAGC 2 cut(s) 1187, 2872
BpuEI CTTGAG 6 cut(s) 1114, 1969, 3650, 3730, 3851, 4163
BpuMI CCSGG 2 cut(s) 1574, 3761
Bsa29I ATCGAT 2 cut(s) 2680, 3972
BsaBI GATNNNNATC 2 cut(s) 2942, 3170
BsaHI GRCGYC 1 cut(s) 61
BsaI GGTCTC 1 cut(s) 3932
BsaJI CCNNGG 6 cut(s) 1620, 1821, 2715, 3524, 3875, 3904
BsaWI WCCGGW 1 cut(s) 1883
BsaXI ACNNNNNCTCC 8 cut(s) 1219, 1249, 1458, 1488, 2090, 2120, 3722, 3752
Bsc4I CCNNNNNNNGG 5 cut(s) 1363, 2388, 2419, 2770, 3510
Bse118I RCCGGY 2 cut(s) 1024, 1883
Bse1I ACTGG 6 cut(s) 53, 218, 393, 1335, 1944, 3235
Bse3DI GCAATG 2 cut(s) 489, 1319
Bse8I GATNNNNATC 2 cut(s) 2942, 3170
BseBI CCWGG 5 cut(s) 742, 1622, 2206, 2420, 3525
BseCI ATCGAT 2 cut(s) 2680, 3972
BseDI CCNNGG 6 cut(s) 1620, 1821, 2715, 3524, 3875, 3904
BseJI GATNNNNATC 2 cut(s) 2942, 3170
BseLI CCNNNNNNNGG 5 cut(s) 1363, 2388, 2419, 2770, 3510
BseMI GCAATG 2 cut(s) 489, 1319
BseMII CTCAG 9 cut(s) 98, 719, 867, 1258, 2886, 3092, 3287, 3369, 3972
BseNI ACTGG 6 cut(s) 53, 218, 393, 1335, 1944, 3235
BseRI GAGGAG 2 cut(s) 124, 2167
BseSI GKGCMC 1 cut(s) 3296
BseXI GCAGC 8 cut(s) 1217, 1321, 1402, 3366, 3388, 3516, 3843, 4183
BseYI CCCAGC 1 cut(s) 1220
Bsh1285I CGRYCG 1 cut(s) 976
BshTI ACCGGT 1 cut(s) 1883
BshVI ATCGAT 2 cut(s) 2680, 3972
BsiEI CGRYCG 1 cut(s) 976
BsiHKAI GWGCWC 1 cut(s) 4371
BsiHKCI CYCGRG 1 cut(s) 240
BsiSI CCGG 4 cut(s) 1025, 1574, 1884, 3761
BslFI GGGAC 3 cut(s) 828, 1396, 4325
BslI CCNNNNNNNGG 5 cut(s) 1363, 2388, 2419, 2770, 3510
BsmAI GTCTC 4 cut(s) 296, 2049, 3080, 3932
BsmFI GGGAC 3 cut(s) 828, 1396, 4325
BsmI GAATGC 3 cut(s) 1398, 1574, 3208
Bso31I GGTCTC 1 cut(s) 3932
BsoBI CYCGRG 1 cut(s) 240
Bsp1286I GDGCHC 3 cut(s) 2620, 3296, 4371
Bsp19I CCATGG 1 cut(s) 2715
BspACI CCGC 4 cut(s) 227, 2518, 3124, 3918
BspCNI CTCAG 9 cut(s) 99, 718, 868, 1257, 2885, 3091, 3286, 3368, 3973
BspDI ATCGAT 2 cut(s) 2680, 3972
BspLI GGNNCC 4 cut(s) 2173, 2617, 3467, 4011
BspMAI CTGCAG 1 cut(s) 1235
BspMI ACCTGC 1 cut(s) 944
BspOI GCTAGC 1 cut(s) 2022
BspPI GGATC 3 cut(s) 2919, 3448, 4411
BspTI CTTAAG 1 cut(s) 3371
BspTNI GGTCTC 1 cut(s) 3932
BsrDI GCAATG 2 cut(s) 489, 1319
BsrFI RCCGGY 2 cut(s) 1024, 1883
BsrI ACTGG 6 cut(s) 53, 218, 393, 1335, 1944, 3235
BssAI RCCGGY 2 cut(s) 1024, 1883
BssECI CCNNGG 6 cut(s) 1620, 1821, 2715, 3524, 3875, 3904
BssNAI GTATAC 1 cut(s) 980
BssNI GRCGYC 1 cut(s) 61
BssSI CACGAG 1 cut(s) 1397
BssT1I CCWWGG 4 cut(s) 1821, 2715, 3875, 3904
Bst1107I GTATAC 1 cut(s) 980
Bst2BI CACGAG 1 cut(s) 1397
Bst2UI CCWGG 5 cut(s) 742, 1622, 2206, 2420, 3525
Bst4CI ACNGT 9 cut(s) 868, 977, 1300, 1370, 1387, 2312, 2628, 3161, 3332
Bst6I CTCTTC 6 cut(s) 752, 1716, 2439, 2551, 2769, 2983
BstACI GRCGYC 1 cut(s) 61
BstAFI CTTAAG 1 cut(s) 3371
BstAPI GCANNNNNTGC 2 cut(s) 1145, 1334
BstDSI CCRYGG 1 cut(s) 2715
BstH2I RGCGCY 1 cut(s) 1102
BstHHI GCGC 3 cut(s) 885, 1101, 4319
BstMAI GTCTC 4 cut(s) 296, 2049, 3080, 3932
BstMCI CGRYCG 1 cut(s) 976
BstMWI GCNNNNNNNGC 4 cut(s) 1136, 1145, 1334, 4375
BstNI CCWGG 5 cut(s) 742, 1622, 2206, 2420, 3525
BstNSI RCATGY 9 cut(s) 158, 278, 1328, 2072, 2188, 2815, 3536, 3863, 3953
BstPAI GACNNNNGTC 1 cut(s) 2922
BstSCI CCNGG 7 cut(s) 740, 1572, 1620, 2204, 2418, 3523, 3759
BstSFI CTRYAG 2 cut(s) 1149, 1231
BstSLI GKGCMC 1 cut(s) 3296
BstV1I GCAGC 8 cut(s) 1217, 1321, 1402, 3366, 3388, 3516, 3843, 4183
BstV2I GAAGAC 3 cut(s) 426, 560, 1950
BstX2I RGATCY 2 cut(s) 103, 2911
BstYI RGATCY 2 cut(s) 103, 2911
BstZ17I GTATAC 1 cut(s) 980
Bsu15I ATCGAT 2 cut(s) 2680, 3972
BsuTUI ATCGAT 2 cut(s) 2680, 3972
BtgI CCRYGG 1 cut(s) 2715
BtrI CACGTC 1 cut(s) 961
BtsI GCAGTG 5 cut(s) 12, 1982, 2513, 3236, 4369
BveI ACCTGC 1 cut(s) 944
CfoI GCGC 3 cut(s) 885, 1101, 4319
Cfr10I RCCGGY 2 cut(s) 1024, 1883
Cfr13I GGNCC 7 cut(s) 738, 1124, 1485, 3179, 3637, 3752, 4010
ClaI ATCGAT 2 cut(s) 2680, 3972
CseI GACGC 2 cut(s) 69, 3460
Csp6I GTAC 6 cut(s) 114, 448, 532, 762, 1510, 2263
CspAI ACCGGT 1 cut(s) 1883
CspCI CAANNNNNGTGG 2 cut(s) 3339, 3374
CviQI GTAC 6 cut(s) 114, 448, 532, 762, 1510, 2263
DraI TTTAAA 1 cut(s) 1504
DraIII CACNNNGTG 1 cut(s) 1740
DriI GACNNNNNGTC 1 cut(s) 288
EaeI YGGCCR 3 cut(s) 3360, 3545, 4158
Eam1104I CTCTTC 6 cut(s) 752, 1716, 2439, 2551, 2769, 2983
Eam1105I GACNNNNNGTC 1 cut(s) 288
EarI CTCTTC 6 cut(s) 752, 1716, 2439, 2551, 2769, 2983
Eco130I CCWWGG 4 cut(s) 1821, 2715, 3875, 3904
Eco24I GRGCYC 1 cut(s) 2620
Eco31I GGTCTC 1 cut(s) 3932
Eco32I GATATC 3 cut(s) 315, 487, 514
Eco47I GGWCC 2 cut(s) 1124, 3752
Eco57I CTGAAG 3 cut(s) 2054, 2216, 4059
Eco88I CYCGRG 1 cut(s) 240
EcoO109I RGGNCCY 1 cut(s) 4010
EcoRI GAATTC 2 cut(s) 1315, 3704
EcoRII CCWGG 5 cut(s) 740, 1620, 2204, 2418, 3523
EcoRV GATATC 3 cut(s) 315, 487, 514
EcoT14I CCWWGG 4 cut(s) 1821, 2715, 3875, 3904
EcoT38I GRGCYC 1 cut(s) 2620
ErhI CCWWGG 4 cut(s) 1821, 2715, 3875, 3904
FaqI GGGAC 3 cut(s) 828, 1396, 4325
FauI CCCGC 1 cut(s) 3911
FauNDI CATATG 4 cut(s) 1462, 2368, 3820, 4115
FbaI TGATCA 1 cut(s) 3060
FblI GTMKAC 4 cut(s) 341, 979, 1764, 4294
Fnu4HI GCNGC 8 cut(s) 1231, 1335, 1416, 3377, 3380, 3530, 3857, 4172
FriOI GRGCYC 1 cut(s) 2620
Fsp4HI GCNGC 8 cut(s) 1231, 1335, 1416, 3377, 3380, 3530, 3857, 4172
FspAI RTGCGCAY 1 cut(s) 884
FspBI CTAG 9 cut(s) 855, 1001, 2019, 2915, 3045, 3582, 3995, 4070, 4412
FspI TGCGCA 1 cut(s) 884
GlaI GCGC 3 cut(s) 884, 1100, 4318
GluI GCNGC 8 cut(s) 1231, 1335, 1416, 3377, 3380, 3530, 3857, 4172
GsaI CCCAGC 1 cut(s) 1224
HaeII RGCGCY 1 cut(s) 1102
HapII CCGG 4 cut(s) 1025, 1574, 1884, 3761
HgaI GACGC 2 cut(s) 69, 3460
HhaI GCGC 3 cut(s) 885, 1101, 4319
Hin1I GRCGYC 1 cut(s) 61
Hin6I GCGC 3 cut(s) 883, 1099, 4317
HinP1I GCGC 3 cut(s) 883, 1099, 4317
HincII GTYRAC 3 cut(s) 342, 849, 3390
HindII GTYRAC 3 cut(s) 342, 849, 3390
HindIII AAGCTT 2 cut(s) 1927, 1966
HpaII CCGG 4 cut(s) 1025, 1574, 1884, 3761
HphI GGTGA 8 cut(s) 490, 968, 1190, 1486, 1902, 2153, 2194, 2651
Hpy99I CGWCG 2 cut(s) 824, 2360
HpyCH4III ACNGT 9 cut(s) 868, 977, 1300, 1370, 1387, 2312, 2628, 3161, 3332
HpyCH4IV ACGT 4 cut(s) 612, 693, 893, 960
HpyF10VI GCNNNNNNNGC 4 cut(s) 1136, 1145, 1334, 4375
HpySE526I ACGT 4 cut(s) 612, 693, 893, 960
Hsp92I GRCGYC 1 cut(s) 61
HspAI GCGC 3 cut(s) 883, 1099, 4317
Ksp22I TGATCA 1 cut(s) 3060
LmnI GCTCC 4 cut(s) 415, 1227, 2615, 3877
Lsp1109I GCAGC 8 cut(s) 1217, 1321, 1402, 3366, 3388, 3516, 3843, 4183
MaeI CTAG 9 cut(s) 855, 1001, 2019, 2915, 3045, 3582, 3995, 4070, 4412
MaeII ACGT 4 cut(s) 612, 693, 893, 960
MfeI CAATTG 1 cut(s) 3393
MflI RGATCY 2 cut(s) 103, 2911
MhlI GDGCHC 3 cut(s) 2620, 3296, 4371
MlsI TGGCCA 3 cut(s) 3362, 3547, 4160
MluNI TGGCCA 3 cut(s) 3362, 3547, 4160
MlyI GAGTC 6 cut(s) 810, 1610, 1811, 1852, 2993, 3110
Mox20I TGGCCA 3 cut(s) 3362, 3547, 4160
MroXI GAANNNNTTC 3 cut(s) 657, 1899, 2627
MscI TGGCCA 3 cut(s) 3362, 3547, 4160
MslI CAYNNNNRTG 4 cut(s) 1009, 2340, 2682, 3324
Msp20I TGGCCA 3 cut(s) 3362, 3547, 4160
MspA1I CMGCKG 2 cut(s) 3379, 4378
MspCI CTTAAG 1 cut(s) 3371
MspI CCGG 4 cut(s) 1025, 1574, 1884, 3761
MspR9I CCNGG 7 cut(s) 742, 1574, 1622, 2206, 2420, 3525, 3761
MunI CAATTG 1 cut(s) 3393
Mva1269I GAATGC 3 cut(s) 1398, 1574, 3208
MvaI CCWGG 5 cut(s) 742, 1622, 2206, 2420, 3525
MwoI GCNNNNNNNGC 4 cut(s) 1136, 1145, 1334, 4375
NciI CCSGG 2 cut(s) 1574, 3761
NcoI CCATGG 1 cut(s) 2715
NdeI CATATG 4 cut(s) 1462, 2368, 3820, 4115
NheI GCTAGC 1 cut(s) 2018
NlaIV GGNNCC 4 cut(s) 2173, 2617, 3467, 4011
NmuCI GTSAC 6 cut(s) 956, 1247, 1695, 3237, 3326, 4124
NsbI TGCGCA 1 cut(s) 884
NspI RCATGY 9 cut(s) 158, 278, 1328, 2072, 2188, 2815, 3536, 3863, 3953
OliI CACNNNNGTG 1 cut(s) 3324
PaeI GCATGC 3 cut(s) 158, 278, 1328
PaeR7I CTCGAG 1 cut(s) 240
PaqCI CACCTGC 1 cut(s) 944
PciI ACATGT 2 cut(s) 2068, 3949
PctI GAATGC 3 cut(s) 1398, 1574, 3208
PdmI GAANNNNTTC 3 cut(s) 657, 1899, 2627
PflMI CCANNNNNTGG 2 cut(s) 2388, 2770
PinAI ACCGGT 1 cut(s) 1883
PkrI GCNGC 8 cut(s) 1232, 1336, 1417, 3378, 3381, 3531, 3858, 4173
PleI GAGTC 6 cut(s) 810, 1610, 1811, 1852, 2993, 3110
PpsI GAGTC 6 cut(s) 810, 1610, 1811, 1852, 2993, 3110
PscI ACATGT 2 cut(s) 2068, 3949
PshAI GACNNNNGTC 1 cut(s) 2922
PshBI ATTAAT 1 cut(s) 3168
PsiI TTATAA 1 cut(s) 620
Psp1406I AACGTT 1 cut(s) 893
Psp6I CCWGG 5 cut(s) 740, 1620, 2204, 2418, 3523
PspFI CCCAGC 1 cut(s) 1220
PspGI CCWGG 5 cut(s) 740, 1620, 2204, 2418, 3523
PspN4I GGNNCC 4 cut(s) 2173, 2617, 3467, 4011
PspPI GGNCC 7 cut(s) 738, 1124, 1485, 3179, 3637, 3752, 4010
PstI CTGCAG 1 cut(s) 1235
PsuI RGATCY 2 cut(s) 103, 2911
PvuII CAGCTG 2 cut(s) 3379, 4378
RsaI GTAC 6 cut(s) 115, 449, 533, 763, 1511, 2264
RsaNI GTAC 6 cut(s) 114, 448, 532, 762, 1510, 2263
RseI CAYNNNNRTG 4 cut(s) 1009, 2340, 2682, 3324
SalI GTCGAC 1 cut(s) 340
SatI GCNGC 8 cut(s) 1231, 1335, 1416, 3377, 3380, 3530, 3857, 4172
Sau96I GGNCC 7 cut(s) 738, 1124, 1485, 3179, 3637, 3752, 4010
ScaI AGTACT 1 cut(s) 763
SchI GAGTC 6 cut(s) 810, 1610, 1811, 1852, 2993, 3110
ScrFI CCNGG 7 cut(s) 742, 1574, 1622, 2206, 2420, 3525, 3761
SduI GDGCHC 3 cut(s) 2620, 3296, 4371
SfcI CTRYAG 2 cut(s) 1149, 1231
Sfr274I CTCGAG 1 cut(s) 240
SinI GGWCC 2 cut(s) 1124, 3752
SlaI CTCGAG 1 cut(s) 240
SmiMI CAYNNNNRTG 4 cut(s) 1009, 2340, 2682, 3324
SmlI CTYRAG 8 cut(s) 240, 1093, 1948, 3371, 3629, 3709, 3830, 4178
SmoI CTYRAG 8 cut(s) 240, 1093, 1948, 3371, 3629, 3709, 3830, 4178
SpeI ACTAGT 1 cut(s) 4411
SphI GCATGC 3 cut(s) 158, 278, 1328
SsiI CCGC 4 cut(s) 227, 2518, 3124, 3918
SspI AATATT 5 cut(s) 1609, 1640, 2290, 2968, 3093
SspMI CTAG 9 cut(s) 855, 1001, 2019, 2915, 3045, 3582, 3995, 4070, 4412
StyD4I CCNGG 7 cut(s) 740, 1572, 1620, 2204, 2418, 3523, 3759
StyI CCWWGG 4 cut(s) 1821, 2715, 3875, 3904
TaaI ACNGT 9 cut(s) 868, 977, 1300, 1370, 1387, 2312, 2628, 3161, 3332
TaiI ACGT 4 cut(s) 615, 696, 896, 963
TatI WGTACW 5 cut(s) 113, 447, 761, 1509, 2262
TseFI GTSAC 6 cut(s) 956, 1247, 1695, 3237, 3326, 4124
TseI GCWGC 8 cut(s) 1230, 1334, 1415, 3376, 3379, 3529, 3856, 4171
Tsp45I GTSAC 6 cut(s) 956, 1247, 1695, 3237, 3326, 4124
TspGWI ACGGA 5 cut(s) 549, 997, 2883, 3743, 4248
Van91I CCANNNNNTGG 2 cut(s) 2388, 2770
Vha464I CTTAAG 1 cut(s) 3371
VpaK11BI GGWCC 2 cut(s) 1124, 3752
VspI ATTAAT 1 cut(s) 3168
XbaI TCTAGA 2 cut(s) 854, 2914
XceI RCATGY 9 cut(s) 158, 278, 1328, 2072, 2188, 2815, 3536, 3863, 3953
XhoI CTCGAG 1 cut(s) 240
XmiI GTMKAC 4 cut(s) 341, 979, 1764, 4294
XmnI GAANNNNTTC 3 cut(s) 657, 1899, 2627
XspI CTAG 9 cut(s) 855, 1001, 2019, 2915, 3045, 3582, 3995, 4070, 4412
ZrmI AGTACT 1 cut(s) 763
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.